AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG020490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020490 MtrunA17_Chr4g0027391 96.761 1667 40 3 1 1654 1 1666 0.0 3351
MsaG020490 MtrunA17_Chr2g0320741 52.038 1472 552 24 39 1481 52 1398 0.0 1386
MsaG020490 MtrunA17_Chr2g0320741 35.636 275 141 8 1410 1654 1456 1724 3.53e-30 130
MsaG020490 MtrunA17_Chr2g0320731 52.926 786 320 15 706 1481 529 1274 0.0 719
MsaG020490 MtrunA17_Chr2g0320731 60.392 510 176 5 39 544 36 523 0.0 623
MsaG020490 MtrunA17_Chr2g0320731 34.100 261 145 7 1417 1654 1272 1528 5.19e-25 114
MsaG020490 MtrunA17_Chr4g0038871 30.122 1308 739 36 174 1409 486 1690 6.75e-148 497
MsaG020490 MtrunA17_Chr2g0316251 47.458 59 29 1 399 457 862 918 8.68e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020490 AT5G22760.1 42.229 978 490 25 713 1653 626 1565 0.0 697
MsaG020490 AT5G22760.1 49.180 549 248 7 29 555 26 565 7.57e-155 514
MsaG020490 AT5G22760.3 42.229 978 490 25 713 1653 351 1290 0.0 696
MsaG020490 AT5G22760.3 46.735 291 136 3 283 555 1 290 1.14e-73 271
MsaG020490 AT5G35210.2 40.940 1021 505 29 672 1654 579 1539 0.0 667
MsaG020490 AT5G35210.2 46.869 527 264 6 26 539 24 547 1.85e-137 465
MsaG020490 AT5G35210.1 40.864 1018 504 29 672 1651 579 1536 0.0 662
MsaG020490 AT5G35210.1 47.909 526 260 5 26 539 24 547 7.72e-137 466
MsaG020490 AT5G22760.2 49.180 549 248 7 29 555 26 565 5.99e-159 514
MsaG020490 AT5G22760.2 50.947 475 223 6 713 1181 626 1096 1.29e-138 459
MsaG020490 AT5G12400.1 28.040 1316 771 30 166 1412 387 1595 2.45e-141 477
MsaG020490 AT1G05380.3 39.362 94 41 4 407 495 628 710 2.73e-11 69.3
MsaG020490 AT1G05380.1 39.362 94 41 4 407 495 628 710 2.73e-11 69.3
MsaG020490 AT1G05380.2 39.362 94 41 4 407 495 628 710 2.73e-11 69.3

Find 380 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTATATTACCTCCTTTA+AGG 0.072433 4:+53040677 MsaT020490.1:CDS
CTTAGAGGGGCTGAAGTATT+TGG 0.116372 4:+53039349 MsaT020490.1:CDS
GCTAACAACATTGGCTTTAC+AGG 0.171435 4:-53040593 None:intergenic
AAATCGCATTCCTTTATATT+TGG 0.179153 4:+53044360 MsaT020490.1:CDS
TTCCTGTCCTTGTAAGATTA+AGG 0.180308 4:-53045121 None:intergenic
TTCAATTGAAACAAATTTAA+AGG 0.186987 4:+53039826 MsaT020490.1:CDS
ACCGCTAATCTTGAAGAATT+TGG 0.197183 4:+53046274 MsaT020490.1:CDS
TAAAGCACTTGGACAACTTT+AGG 0.200986 4:-53039710 None:intergenic
GACAAGCTGTCTACTTCTTT+TGG 0.216119 4:-53043946 None:intergenic
ATTCCCTCTCCATTCCTTAA+AGG 0.232932 4:-53040691 None:intergenic
ATCATTAACTTCCTACTTAC+AGG 0.239057 4:-53038902 None:intergenic
TGAAGAATCAGATGCAAATT+TGG 0.246848 4:-53040401 None:intergenic
TCATAAAATCCTTTCCATTC+AGG 0.255634 4:-53038848 None:intergenic
TCTGGGGCCAATTCTGATTC+TGG 0.261217 4:+53045788 MsaT020490.1:CDS
CAATGTTCCGGATCAGAAAT+TGG 0.261229 4:-53046409 None:intergenic
AGAGAAGAAGGAAGGGAAAT+TGG 0.265490 4:+53037845 MsaT020490.1:CDS
TAGTGCTAAGGTTGCAAATA+AGG 0.277463 4:+53038130 MsaT020490.1:CDS
AAAGCTTCTTATTTACAATA+AGG 0.282416 4:-53040051 None:intergenic
TTTGATTCCCAATGATAATA+TGG 0.282866 4:+53039949 MsaT020490.1:CDS
GGTGGTTCGAGGAAAATTTC+TGG 0.283467 4:+53043894 MsaT020490.1:intron
GACAACCGTCACAACAAATA+AGG 0.289770 4:-53039207 None:intergenic
GAAAACACCCAAGTAGGTTT+TGG 0.293585 4:+53040268 MsaT020490.1:CDS
GCCAAAAGCATCTTCCTATT+AGG 0.294297 4:+53044272 MsaT020490.1:CDS
ACAAAATCATCCAAAGTAAA+AGG 0.294748 4:-53038434 None:intergenic
ATTGTTCTTGGGGTGTTATC+TGG 0.294924 4:+53045352 MsaT020490.1:CDS
ATATCAGAATGACTGGTCTT+TGG 0.298592 4:-53045177 None:intergenic
TCCTCCTTTCGTCGTTTCCT+TGG 0.302319 4:-53037819 None:intergenic
AATTCTTTGTGATGATGTTT+TGG 0.304629 4:+53038931 MsaT020490.1:CDS
GCAAAGGGAACCTCACTTAG+AGG 0.304700 4:+53039334 MsaT020490.1:CDS
GGACAATACCATGGCCCTTC+TGG 0.305973 4:-53039277 None:intergenic
ACAGCCATTGTTTGCCTCCT+TGG 0.305979 4:+53046380 MsaT020490.1:CDS
AAAGCACTTGGACAACTTTA+GGG 0.307649 4:-53039709 None:intergenic
TGTCACAAATGTTTGCATTT+CGG 0.310047 4:-53044204 None:intergenic
TATGTACGACATGGGTTTAA+AGG 0.313931 4:-53040338 None:intergenic
CCGCCATCGTCCGGAACTAT+TGG 0.315071 4:+53038332 MsaT020490.1:CDS
ACTTGAAGAATCTCAAATTT+CGG 0.319946 4:+53045643 MsaT020490.1:CDS
AAGTAGCTTCACGTTTCTTT+TGG 0.320019 4:+53040512 MsaT020490.1:CDS
CAACCATACACCTGTTAGTT+TGG 0.320937 4:+53039895 MsaT020490.1:CDS
AGCTTGCATCACAATGTCTT+AGG 0.323788 4:+53038564 MsaT020490.1:CDS
CACACTTTCCAAAACCTACT+TGG 0.324457 4:-53040276 None:intergenic
ATTGGAGGTGTCTGACTTGC+CGG 0.325720 4:+53046428 MsaT020490.1:CDS
GTCGCAACAATAATTGTTCT+TGG 0.327851 4:+53045340 MsaT020490.1:CDS
TGGTATATGGAGAAGGGTGG+TGG 0.332242 4:+53037780 None:intergenic
TCCTGTCCTTGTAAGATTAA+GGG 0.333362 4:-53045120 None:intergenic
TGCTTGGCCCTTGATAATTC+AGG 0.335368 4:-53038463 None:intergenic
ACTGTAAAGAAAGAACATTC+TGG 0.338373 4:+53045770 MsaT020490.1:CDS
TCACACCTCCTATCTGTGTA+TGG 0.344084 4:+53038374 MsaT020490.1:CDS
CCCTAATAGGAAGATGCTTT+TGG 0.344790 4:-53044273 None:intergenic
GTCCCTCTGCTTATCATTCA+AGG 0.358222 4:+53039227 MsaT020490.1:CDS
GGATAAAGAAGCTGTGAAAT+TGG 0.359001 4:+53039093 MsaT020490.1:CDS
GATTCATCACTAGTTATGTT+TGG 0.361801 4:-53045087 None:intergenic
GAGTCTAGAGACTGAACTTA+TGG 0.362273 4:-53044998 None:intergenic
ATTACGAAAGTGGTTTATAC+AGG 0.363426 4:+53037976 MsaT020490.1:CDS
TTAGAGGGGCTGAAGTATTT+GGG 0.369548 4:+53039350 MsaT020490.1:CDS
GGTTGCAAATAAGGCTGATA+AGG 0.374023 4:+53038139 MsaT020490.1:CDS
CCAAAAGCATCTTCCTATTA+GGG 0.382736 4:+53044273 MsaT020490.1:CDS
TCGCAACAATAATTGTTCTT+GGG 0.383588 4:+53045341 MsaT020490.1:CDS
TGTAAGATTAAGGGACTTGT+TGG 0.385903 4:-53045111 None:intergenic
TTTGTATGGGCAGCTCTTCA+TGG 0.387515 4:+53039378 MsaT020490.1:CDS
AAAGGTAATGTTGAATCTGC+TGG 0.396394 4:-53046085 None:intergenic
GATATCGTTCCTGCAGAAAC+TGG 0.396921 4:+53039025 MsaT020490.1:CDS
AGAAGGCACCATATTATCAT+TGG 0.397568 4:-53039957 None:intergenic
GTCTCTAGACTCTCTACAAA+AGG 0.397684 4:+53045009 MsaT020490.1:CDS
GGTTTCTTAACTTCTGACTT+AGG 0.398497 4:-53045737 None:intergenic
CCGTCCTGTGTGTTCTGCTC+TGG 0.398605 4:-53044151 None:intergenic
GCTTATCATTCAAGGTGTAT+TGG 0.399813 4:+53039235 MsaT020490.1:CDS
AAAAGAAACGTGAAGCTACT+TGG 0.403713 4:-53040510 None:intergenic
AGCGTCAGACATACCTGATT+CGG 0.405315 4:+53045434 MsaT020490.1:CDS
AAAGAAGTAGACAGCTTGTC+TGG 0.406566 4:+53043949 MsaT020490.1:CDS
AAAGGAGGAGGAAGAGAAGA+AGG 0.408215 4:+53037833 MsaT020490.1:CDS
GCGCCACCACATACTTTCCT+TGG 0.409523 4:-53043401 None:intergenic
GTCAGACACCTCCAATGTTC+CGG 0.411916 4:-53046421 None:intergenic
AAATTCGTCCGATACTTGTC+AGG 0.415123 4:+53038042 MsaT020490.1:CDS
GATGACGATGGTTCTGTTGC+AGG 0.415380 4:+53046007 MsaT020490.1:CDS
CACCAACCACACCTCTCTCT+TGG 0.415384 4:-53040565 None:intergenic
TTCTATATTTGGTGGTCAAT+GGG 0.418322 4:+53038813 MsaT020490.1:CDS
ATTCTATATTTGGTGGTCAA+TGG 0.418715 4:+53038812 MsaT020490.1:CDS
CTATTAAAAGCAAGACTTTG+AGG 0.422842 4:-53040001 None:intergenic
AGTTGTTGTGTATGTCTTCA+AGG 0.423831 4:+53046310 MsaT020490.1:CDS
ATTGGTGGAGTTGATTTGTC+CGG 0.423880 4:+53046217 MsaT020490.1:CDS
AAAGAGGTCCTGGTATATCT+TGG 0.424099 4:-53039064 None:intergenic
AGTTAAGAGAAGAAATAAGT+TGG 0.424859 4:+53038088 MsaT020490.1:CDS
TTGCATTTGCCGCCATCGTC+CGG 0.425732 4:+53038323 MsaT020490.1:CDS
AAGCAGAAGCTTCGGTCTCT+TGG 0.426357 4:-53044180 None:intergenic
TTGTGGCCATGCAAATGATA+TGG 0.427261 4:+53040213 MsaT020490.1:CDS
GCCAATGTTGTTAGCAAGAG+AGG 0.427474 4:+53040601 MsaT020490.1:CDS
GTAAAAGAATATGTCATTGC+AGG 0.428240 4:-53044473 None:intergenic
CTGTCTGACGCATGACCCTC+TGG 0.428909 4:-53040436 None:intergenic
TCTCAAATTTCGGCCATGTT+GGG 0.429617 4:+53045653 MsaT020490.1:CDS
TCTACCTTGACCAAACTAAC+AGG 0.429884 4:-53039905 None:intergenic
TGGAACACTGTTTCTGTGCC+AGG 0.430911 4:+53045941 MsaT020490.1:CDS
GTATGGTTGTCTTCACTTGA+AGG 0.431850 4:-53039881 None:intergenic
AAATGTTCCAGAATCAGAAT+TGG 0.432378 4:-53045795 None:intergenic
AGAAGGGTGGTGGGAAACCG+AGG 0.433925 4:+53037790 MsaT020490.1:CDS
GTTGGTGCCCTGAATTATCA+AGG 0.434667 4:+53038455 MsaT020490.1:CDS
GAGTAATTACCGAATTGAAA+TGG 0.434902 4:-53044548 None:intergenic
GAGGTTCCCTTTGCAATTGT+AGG 0.438091 4:-53039325 None:intergenic
ATGTAAGTTGCAATGGTACT+AGG 0.439524 4:-53040718 None:intergenic
TGATTTGTCCGGGGAATTGT+TGG 0.440164 4:+53046228 MsaT020490.1:CDS
TTTCTGGGGCCAGTTTCTGC+AGG 0.443453 4:-53039034 None:intergenic
TATTAAAAGCAAGACTTTGA+GGG 0.443817 4:-53040000 None:intergenic
CAAGGACAGGAAAACAGCTC+TGG 0.444099 4:+53045132 MsaT020490.1:CDS
TCCAAATTCTTCAAGATTAG+CGG 0.446485 4:-53046275 None:intergenic
ACAAATCAACTCCACCAATC+TGG 0.447759 4:-53046213 None:intergenic
GTCAGATGGCCATTTCAATT+CGG 0.448942 4:+53044539 MsaT020490.1:CDS
GAGGAGGAAGAGAAGAAGGA+AGG 0.449428 4:+53037837 MsaT020490.1:CDS
GAGTGCAAAATTGATATGGC+TGG 0.449519 4:+53039301 MsaT020490.1:CDS
GCATGAACCAATTTCTGATC+CGG 0.449661 4:+53046402 MsaT020490.1:CDS
TCCAGAGTGCAAAATTGATA+TGG 0.450615 4:+53039297 MsaT020490.1:CDS
TGACAAGTAGGTCCCGAATC+AGG 0.451564 4:-53045447 None:intergenic
CGAAACCGATTCCGTTGGTT+GGG 0.451835 4:+53037898 MsaT020490.1:CDS
TGCCTCACAGCTGGCACTCC+AGG 0.453248 4:+53043998 MsaT020490.1:CDS
AAAGTTGTTTATTACGAAAG+TGG 0.453981 4:+53037966 MsaT020490.1:CDS
CTCAGGCACACCAATAGTTC+CGG 0.454702 4:-53038342 None:intergenic
GTATTTGGGAAGGATTTGTA+TGG 0.456228 4:+53039364 MsaT020490.1:CDS
CTGTAAAGAAAGAACATTCT+GGG 0.457817 4:+53045771 MsaT020490.1:CDS
AGAGCGTAATAAATTAGATT+CGG 0.462015 4:+53045910 MsaT020490.1:CDS
TCCCTTAATCTTACAAGGAC+AGG 0.464724 4:+53045119 MsaT020490.1:CDS
AGGAGGAAGAGAAGAAGGAA+GGG 0.465013 4:+53037838 MsaT020490.1:CDS
TAAAAGGATGAAGAAACAAT+CGG 0.465934 4:-53038418 None:intergenic
ACTTGTGTGGAAAGGCATAT+AGG 0.471096 4:+53045469 MsaT020490.1:CDS
TTAGGGTTGGTATATGGAGA+AGG 0.471916 4:+53037773 None:intergenic
TGAATGTCGCCTCTGCGGTA+TGG 0.472769 4:+53039177 MsaT020490.1:CDS
GGTGTCTGACTTGCCGGGAT+TGG 0.473341 4:+53046434 MsaT020490.1:CDS
TGTTTGCATGGTTTAGTCGT+TGG 0.474831 4:+53040757 MsaT020490.1:CDS
AATTCATCTTTCTCTGATGC+GGG 0.475183 4:+53038499 MsaT020490.1:CDS
GATGGAGATGTTGATAGAAA+TGG 0.477071 4:+53039151 MsaT020490.1:CDS
ATCTCAAATTTCGGCCATGT+TGG 0.477406 4:+53045652 MsaT020490.1:CDS
CTGTTTCTGTGCCAGGGCCT+CGG 0.477867 4:+53045948 MsaT020490.1:CDS
CACTTGAAGGAGGACGTAAA+GGG 0.478370 4:-53039868 None:intergenic
CGGAAGGAAGAGAAAAGTAT+TGG 0.479033 4:+53044329 MsaT020490.1:CDS
TTGTTTCATATCAGAATGAC+TGG 0.479132 4:-53045184 None:intergenic
GCGTCAGACATACCTGATTC+GGG 0.480891 4:+53045435 MsaT020490.1:CDS
CAATTCATCTTTCTCTGATG+CGG 0.481700 4:+53038498 MsaT020490.1:CDS
ACAGGATAGACAGGAGTAGC+AGG 0.481726 4:-53045839 None:intergenic
TGATCCTTTCGAAACTGACT+TGG 0.481873 4:-53045214 None:intergenic
GTTGCAAATAAGGCTGATAA+GGG 0.483273 4:+53038140 MsaT020490.1:CDS
GTGGTCAATGGGTACACAAA+AGG 0.485646 4:+53038824 MsaT020490.1:CDS
TTGTATGGGCAGCTCTTCAT+GGG 0.486332 4:+53039379 MsaT020490.1:CDS
AGTTGTCTCTCTTGCAAATG+AGG 0.488523 4:-53044495 None:intergenic
TACCTCCCAACCAACGGAAT+CGG 0.490850 4:-53037903 None:intergenic
TTTATTACAGGTGCAACGAT+TGG 0.491440 4:+53038753 MsaT020490.1:intron
ATTTCGGAAAGCAGAAGCTT+CGG 0.491537 4:-53044188 None:intergenic
ACTGGTAATTTCCGAGGCCC+TGG 0.492731 4:-53045959 None:intergenic
TTACTCACTTTAAGTAGAAG+TGG 0.493279 4:-53040856 None:intergenic
TCTCTAGACTCTCTACAAAA+GGG 0.493830 4:+53045010 MsaT020490.1:CDS
TTGGTGGAGTTGATTTGTCC+GGG 0.495000 4:+53046218 MsaT020490.1:CDS
AGGATCAAAGCGTAAATGTC+AGG 0.496110 4:+53045230 MsaT020490.1:CDS
CGTTTCCTTGGACGACCCCT+CGG 0.496957 4:-53037807 None:intergenic
TAATGTTGAATCTGCTGGAT+TGG 0.498113 4:-53046080 None:intergenic
ACAACCGTCACAACAAATAA+GGG 0.498455 4:-53039206 None:intergenic
CGCGAAAGGAATCAGAGGTC+GGG 0.498628 4:+53038984 MsaT020490.1:CDS
TAACTTGCTTCACTGTATGT+TGG 0.499546 4:-53046052 None:intergenic
GATGATGACGGCCAGATTGG+TGG 0.499689 4:+53046202 MsaT020490.1:CDS
TGCTTAACATGCCTTCTCAC+TGG 0.501178 4:-53045977 None:intergenic
ACGAAACCGATTCCGTTGGT+TGG 0.502335 4:+53037897 MsaT020490.1:CDS
TTAAATGTTGCAAGTGTCGC+AGG 0.502679 4:+53045678 MsaT020490.1:CDS
GAAGGCACCATATTATCATT+GGG 0.503642 4:-53039956 None:intergenic
ATGAAAATGTTTATACCAGA+AGG 0.504077 4:+53039262 MsaT020490.1:CDS
ACACTTTCCAAAACCTACTT+GGG 0.506024 4:-53040275 None:intergenic
AAGTTAAGAAACCACGCAAA+AGG 0.506224 4:+53045747 MsaT020490.1:CDS
TCACTTGAAGGAGGACGTAA+AGG 0.506308 4:-53039869 None:intergenic
TATAACTGTGCCCAAATCAA+TGG 0.507813 4:+53043456 MsaT020490.1:CDS
GGTATATGGAGAAGGGTGGT+GGG 0.507847 4:+53037781 None:intergenic
CAATTTCTGATCCGGAACAT+TGG 0.508473 4:+53046410 MsaT020490.1:CDS
GTTGGAAATTCAGCTTGTAA+AGG 0.508615 4:-53046034 None:intergenic
TTGGAGGTGTCTGACTTGCC+GGG 0.509668 4:+53046429 MsaT020490.1:CDS
TCAGATGATGACGGCCAGAT+TGG 0.510715 4:+53046199 MsaT020490.1:CDS
ATATTACCTCCTTTAAGGAA+TGG 0.511315 4:+53040682 MsaT020490.1:CDS
AAGTTCATTTGTATCGAAGA+TGG 0.511723 4:-53046170 None:intergenic
ATGCAAGCTATAGAGAGAAC+TGG 0.511883 4:+53040791 MsaT020490.1:CDS
CATTTGCAAGAGAGACAACT+TGG 0.512095 4:+53044498 MsaT020490.1:CDS
CACACCTCCTATCTGTGTAT+GGG 0.512209 4:+53038375 MsaT020490.1:CDS
ATTATTTGTTGCCTGTAAGT+AGG 0.512442 4:+53038891 MsaT020490.1:CDS
GCTTGGCCCTTGATAATTCA+GGG 0.514813 4:-53038462 None:intergenic
AGAAGGCATGTTAAGCATGA+AGG 0.515135 4:+53045983 MsaT020490.1:CDS
GGAATCAAACTCGCAGTGGT+TGG 0.515350 4:-53039935 None:intergenic
CCATGTGAAGAGTACTATAG+TGG 0.515873 4:+53044415 MsaT020490.1:CDS
CTGAAAGAGTTTCCTAGAAA+CGG 0.519171 4:+53037930 MsaT020490.1:CDS
TAGGGTTGGTATATGGAGAA+GGG 0.519357 4:+53037774 None:intergenic
GAGTAGGAATGCCTCACAGC+TGG 0.519474 4:+53043989 MsaT020490.1:CDS
CGCAACAATAATTGTTCTTG+GGG 0.520604 4:+53045342 MsaT020490.1:CDS
TTCTGAAAGTTCATGTCGGA+TGG 0.520920 4:-53040124 None:intergenic
GCTCAAACCCCTCAGATGAC+AGG 0.521684 4:-53038544 None:intergenic
CCCTCTCTTGCTAACAACAT+TGG 0.523758 4:-53040602 None:intergenic
TATGTTTGGAGCAAGTAACT+TGG 0.524384 4:-53045073 None:intergenic
TTGGTTTCAGCATCAAATGC+TGG 0.525946 4:+53039112 MsaT020490.1:CDS
AACAGTCAATCAAGTAATTG+TGG 0.527472 4:+53040196 MsaT020490.1:CDS
AACCGATTCCGTTGGTTGGG+AGG 0.527886 4:+53037901 MsaT020490.1:CDS
TGACCAAACTAACAGGTGTA+TGG 0.528723 4:-53039898 None:intergenic
TTTCTCTGATGCGGGTGTTG+AGG 0.529669 4:+53038507 MsaT020490.1:CDS
GGAACCCTTATTTGTTGTGA+CGG 0.532124 4:+53039202 MsaT020490.1:CDS
ATATAAAATGTAAGTTGCAA+TGG 0.532285 4:-53040725 None:intergenic
AAGGGTGGTGGGAAACCGAG+GGG 0.536360 4:+53037792 MsaT020490.1:CDS
TTAAAGGAGGTAATATAGCA+AGG 0.536642 4:-53040675 None:intergenic
GAAGGGTGGTGGGAAACCGA+GGG 0.536694 4:+53037791 MsaT020490.1:CDS
CAAAGGGAACCTCACTTAGA+GGG 0.537120 4:+53039335 MsaT020490.1:CDS
GTATGAAGAAGGTAATGAAA+AGG 0.537218 4:+53044390 MsaT020490.1:CDS
TCATTTCCCACAGGATAGAC+AGG 0.537928 4:-53045848 None:intergenic
GCAGTAGGGTCGTATTCTAA+AGG 0.538679 4:-53046103 None:intergenic
TGTGGGTAATAGGTGGTTCG+AGG 0.539161 4:+53043883 MsaT020490.1:intron
AGGGGCTGAAGTATTTGGGA+AGG 0.540295 4:+53039354 MsaT020490.1:CDS
TACAGGGTTAATTATGAAGA+CGG 0.540533 4:+53037993 MsaT020490.1:CDS
TTGGTAAAAGAGTATGAAGA+AGG 0.540715 4:+53044379 MsaT020490.1:CDS
GGAAACCGAGGGGTCGTCCA+AGG 0.541139 4:+53037802 MsaT020490.1:CDS
ACGGAGGCAATAATTTCAGC+TGG 0.542838 4:+53040088 MsaT020490.1:CDS
GGCTGGGCCTACAATTGCAA+AGG 0.544269 4:+53039318 MsaT020490.1:CDS
AGTGATGAAGCTACAGATGA+TGG 0.544667 4:+53043376 MsaT020490.1:CDS
ACAAGTCCCTTAATCTTACA+AGG 0.544677 4:+53045114 MsaT020490.1:CDS
GGTACAGAAACCACTGGGGA+TGG 0.546252 4:+53039133 MsaT020490.1:CDS
GTTGAACATACACAAGTAAG+TGG 0.548025 4:-53039411 None:intergenic
TTTCTGATCCGGAACATTGG+AGG 0.548867 4:+53046413 MsaT020490.1:CDS
CTTGAAAGCCTGTCATCTGA+GGG 0.549090 4:+53038536 MsaT020490.1:CDS
AAATGCAATGGTGGAGGCAA+AGG 0.549280 4:-53038308 None:intergenic
GGCGGCAAATGCAATGGTGG+AGG 0.550427 4:-53038314 None:intergenic
TGTAAATAAGAAGCTTTCTG+AGG 0.550887 4:+53040057 MsaT020490.1:CDS
GTATGTCTTCAAGGTGAACC+AGG 0.552159 4:+53046319 MsaT020490.1:CDS
GTATGTGGTGGCGCGGTGGA+AGG 0.553426 4:+53043410 MsaT020490.1:CDS
AGATTGCTGTCAAAAGCAGT+AGG 0.554249 4:-53046118 None:intergenic
AAAAGGATGAAGAAACAATC+GGG 0.554743 4:-53038417 None:intergenic
TTATCGTCCCTGACAAGTAT+CGG 0.555161 4:-53038050 None:intergenic
GGAACACTGTTTCTGTGCCA+GGG 0.555258 4:+53045942 MsaT020490.1:CDS
AAAGAAACGTGAAGCTACTT+GGG 0.557015 4:-53040509 None:intergenic
AGGTGTGAGACACTCGGCTC+AGG 0.557196 4:-53038359 None:intergenic
TATTTGGGAAGGATTTGTAT+GGG 0.557360 4:+53039365 MsaT020490.1:CDS
AACTCCAAGTCAGTTTCGAA+AGG 0.557972 4:+53045210 MsaT020490.1:CDS
TCTTGAAAGCCTGTCATCTG+AGG 0.558174 4:+53038535 MsaT020490.1:CDS
AAGGAAACGACGAAAGGAGG+AGG 0.558932 4:+53037821 MsaT020490.1:CDS
ATCATATTCCAACAATTCCC+CGG 0.558947 4:-53046236 None:intergenic
GACGATGGCGGCAAATGCAA+TGG 0.560000 4:-53038320 None:intergenic
ATTGCGTCAAACAAAGTGCT+TGG 0.560871 4:-53038479 None:intergenic
CCCTCTCCATTCCTTAAAGG+AGG 0.561002 4:-53040688 None:intergenic
GCATGGATTCATAAAGCACT+TGG 0.562034 4:-53039721 None:intergenic
CTCGTGTTCTTCATGTCAGA+TGG 0.563730 4:+53044525 MsaT020490.1:CDS
CCACTATAGTACTCTTCACA+TGG 0.564499 4:-53044415 None:intergenic
TGTCGCCTCTGCGGTATGGA+CGG 0.565363 4:+53039181 MsaT020490.1:CDS
GGATCAGTTGCACCAACAGC+AGG 0.566079 4:-53038194 None:intergenic
TACATAAATTACTATATGCA+TGG 0.566182 4:+53040355 MsaT020490.1:CDS
AATCTTGAAGAATTTGGAGA+TGG 0.566311 4:+53046280 MsaT020490.1:CDS
TGCTACTCCTGTCTATCCTG+TGG 0.566623 4:+53045841 MsaT020490.1:CDS
CAGAGCAGAACACACAGGAC+GGG 0.567005 4:+53044152 MsaT020490.1:CDS
GGACCTACTTGTCACTTGTG+TGG 0.567664 4:+53045456 MsaT020490.1:CDS
GTTTCAATTGAAGCACAAAG+AGG 0.567719 4:-53039815 None:intergenic
TCCAAGGAAACGACGAAAGG+AGG 0.569378 4:+53037818 MsaT020490.1:CDS
TCTTAGATATTACAATCAGA+AGG 0.569840 4:+53039682 MsaT020490.1:CDS
GGTACACAAAAGGACCTGAA+TGG 0.571280 4:+53038834 MsaT020490.1:CDS
CTATAGCTTGCATTTACGAA+GGG 0.571941 4:-53040781 None:intergenic
AATTGGTTAATGAAGCTAAG+AGG 0.573948 4:+53037862 MsaT020490.1:CDS
AGTGCAAAATTGATATGGCT+GGG 0.574613 4:+53039302 MsaT020490.1:CDS
TGGGGACTGGGTTAAGCTGA+CGG 0.574696 4:+53043249 MsaT020490.1:CDS
GCTTGCTCGATACGTTGACT+TGG 0.575551 4:+53038777 MsaT020490.1:CDS
AGCTACAGATGATGGTTCCA+AGG 0.575600 4:+53043384 MsaT020490.1:CDS
GAAGGCATGTTAAGCATGAA+GGG 0.577448 4:+53045984 MsaT020490.1:CDS
CTTGATAGCACTAAATGTTG+TGG 0.577692 4:-53040833 None:intergenic
ATTTGCATCTGATTCTTCAG+AGG 0.579732 4:+53040405 MsaT020490.1:CDS
CAGAACACACAGGACGGGAA+AGG 0.581987 4:+53044157 MsaT020490.1:CDS
TGTTTATACCAGAAGGGCCA+TGG 0.582103 4:+53039269 MsaT020490.1:CDS
GTTAAATGATCATTTCCCAC+AGG 0.582349 4:-53045857 None:intergenic
TCAGAAATTGGTTCATGCCA+AGG 0.582371 4:-53046397 None:intergenic
TATATGGAGAGATGTTTGCA+TGG 0.584080 4:+53040745 MsaT020490.1:CDS
AAGGACAGGAAAACAGCTCT+GGG 0.584395 4:+53045133 MsaT020490.1:CDS
TGAGACGAAACCGATTCCGT+TGG 0.585853 4:+53037893 MsaT020490.1:CDS
TAGTAATTTATGTACGACAT+GGG 0.586015 4:-53040346 None:intergenic
CACAAGTGCAATGCATGTCA+AGG 0.586368 4:+53044661 MsaT020490.1:CDS
TGATAAGTTATTGCCAATCC+CGG 0.586624 4:-53046447 None:intergenic
TACACCTGTTAGTTTGGTCA+AGG 0.586719 4:+53039901 MsaT020490.1:CDS
CTTCTCACTGGTAATTTCCG+AGG 0.587451 4:-53045965 None:intergenic
TTGGTGCCCTGAATTATCAA+GGG 0.588615 4:+53038456 MsaT020490.1:CDS
CTCGGAAATTACCAGTGAGA+AGG 0.589545 4:+53045966 MsaT020490.1:CDS
ATGCAAATACCATGGTACAT+TGG 0.589663 4:-53039752 None:intergenic
AGTGTTGCAGAATAGTGCTA+AGG 0.589906 4:+53038118 MsaT020490.1:CDS
GCTGGGCCTACAATTGCAAA+GGG 0.590150 4:+53039319 MsaT020490.1:CDS
AATGCTGGTACAGAAACCAC+TGG 0.591279 4:+53039127 MsaT020490.1:CDS
ATCAAACTTTGACTTCTACC+AGG 0.592107 4:+53045253 MsaT020490.1:CDS
ACTGATCCGTGTGAATCAAA+AGG 0.592948 4:+53038209 MsaT020490.1:CDS
AAGAACAATTATTGTTGCGA+CGG 0.593266 4:-53045338 None:intergenic
GGCATTGATAGAAGTGAAGA+GGG 0.593354 4:+53040028 MsaT020490.1:CDS
TAAAGGAGGTAATATAGCAA+GGG 0.593898 4:-53040674 None:intergenic
AGTTGTTCCTTGAGTAGATG+TGG 0.594170 4:-53043308 None:intergenic
CCAGAGCAGAACACACAGGA+CGG 0.595220 4:+53044151 MsaT020490.1:CDS
AATGTACCATGGTATTTGCA+TGG 0.595477 4:+53039754 MsaT020490.1:CDS
TCTATAGCTTGCATTTACGA+AGG 0.597908 4:-53040782 None:intergenic
TACTTGTCACTTGTGTGGAA+AGG 0.598568 4:+53045461 MsaT020490.1:CDS
ACGCGAAAGGAATCAGAGGT+CGG 0.602271 4:+53038983 MsaT020490.1:CDS
TGTTGAAACAGAGCAAGGGC+CGG 0.602622 4:+53044309 MsaT020490.1:CDS
CTGGAACATTTAATGATACG+AGG 0.602782 4:+53045807 MsaT020490.1:CDS
TTTCCACACAAGTGACAAGT+AGG 0.603762 4:-53045459 None:intergenic
CTCTAGACTCTCTACAAAAG+GGG 0.603819 4:+53045011 MsaT020490.1:CDS
GGCATTAGGTTATTGTCACA+AGG 0.605546 4:+53044969 MsaT020490.1:intron
TGCCGAAGTGGAATCAGACT+CGG 0.605796 4:-53045307 None:intergenic
TTCAGAGGAGTCTAAGCCAG+AGG 0.606127 4:+53040420 MsaT020490.1:CDS
ATTTGCAAAGCATCAAGAGA+AGG 0.606788 4:-53039974 None:intergenic
AATTAGATTCGGATGTCGAG+TGG 0.607187 4:+53045921 MsaT020490.1:CDS
GCTACTCCTGTCTATCCTGT+GGG 0.607683 4:+53045842 MsaT020490.1:CDS
GCAACTCCATATCATTTGCA+TGG 0.607791 4:-53040219 None:intergenic
TGGCATTGATAGAAGTGAAG+AGG 0.608124 4:+53040027 MsaT020490.1:CDS
CCTCCTTTAAGGAATGGAGA+GGG 0.609245 4:+53040688 MsaT020490.1:CDS
AAAGGAATCAGAGGTCGGGA+TGG 0.609589 4:+53038988 MsaT020490.1:CDS
GCTTTCTGAGGAAATTAAGA+CGG 0.611328 4:+53040069 MsaT020490.1:CDS
GAAAGTATGTGGTGGCGCGG+TGG 0.613179 4:+53043406 MsaT020490.1:CDS
TTCCAAGAGAGAGGTGTGGT+TGG 0.613917 4:+53040563 MsaT020490.1:CDS
AACAAAGAAAACACCCAAGT+AGG 0.614166 4:+53040262 MsaT020490.1:CDS
AAAAGTGCCACATCTACTCA+AGG 0.614213 4:+53043301 MsaT020490.1:CDS
GTCCGAAAAGCAGCTCGCCA+AGG 0.614635 4:+53043478 MsaT020490.1:CDS
ACTCAGAAACGTGCACCAAG+TGG 0.615018 4:+53043328 MsaT020490.1:CDS
ATGCTGGTACAGAAACCACT+GGG 0.615586 4:+53039128 MsaT020490.1:CDS
GATAGGAGGTGTGAGACACT+CGG 0.616004 4:-53038365 None:intergenic
TTACGAAAGTGGTTTATACA+GGG 0.617585 4:+53037977 MsaT020490.1:CDS
ACCTCCTTTAAGGAATGGAG+AGG 0.618136 4:+53040687 MsaT020490.1:CDS
TGAAAATGTTTATACCAGAA+GGG 0.618223 4:+53039263 MsaT020490.1:CDS
AGTGCTGTTGAAACAGAGCA+AGG 0.618252 4:+53044304 MsaT020490.1:CDS
GATGGCGGCAAATGCAATGG+TGG 0.619713 4:-53038317 None:intergenic
AGCACATACCTCCCAACCAA+CGG 0.620826 4:-53037909 None:intergenic
AACTGAAATGAACACGCGAA+AGG 0.622438 4:+53038970 MsaT020490.1:CDS
GAAACAGAGCAAGGGCCGGA+AGG 0.624876 4:+53044313 MsaT020490.1:CDS
TGAAGACGACGGAGATGATG+CGG 0.625070 4:+53038247 MsaT020490.1:CDS
ACAAAAGGACCTGAATGGAA+AGG 0.627080 4:+53038839 MsaT020490.1:CDS
TTTATGAATCCATGCTGCAT+AGG 0.627514 4:+53039729 MsaT020490.1:CDS
GTGTGGAAAGGCATATAGGT+CGG 0.628441 4:+53045473 MsaT020490.1:CDS
AGAAACGTGCACCAAGTGGA+AGG 0.629708 4:+53043332 MsaT020490.1:CDS
GATGATGCGGATTTGTCAAG+TGG 0.629841 4:+53038260 MsaT020490.1:CDS
TTCTGAGGAAATTAAGACGG+AGG 0.630389 4:+53040072 MsaT020490.1:CDS
AAGTCTATCCAAGATATACC+AGG 0.630861 4:+53039056 MsaT020490.1:CDS
TACTTCAGCCCCTCTAAGTG+AGG 0.630941 4:-53039344 None:intergenic
TTGTGGATGTTCCAAGAGAG+AGG 0.631201 4:+53040554 MsaT020490.1:CDS
CACCTTGAATGATAAGCAGA+GGG 0.631296 4:-53039229 None:intergenic
CCAATGTTGTTAGCAAGAGA+GGG 0.631947 4:+53040602 MsaT020490.1:CDS
AGCCGAGTCTGATTCCACTT+CGG 0.632293 4:+53045305 MsaT020490.1:CDS
GCAACATTTAAAGCCCAACA+TGG 0.633187 4:-53045666 None:intergenic
GAGTCGCAGTTGAAATGAGT+AGG 0.633515 4:+53043973 MsaT020490.1:CDS
GTGCTGTTGAAACAGAGCAA+GGG 0.636264 4:+53044305 MsaT020490.1:CDS
CATGCCAAGGAGGCAAACAA+TGG 0.637832 4:-53046384 None:intergenic
AAAACCCATACACAGATAGG+AGG 0.638026 4:-53038379 None:intergenic
GTACATTGGCCTATGCAGCA+TGG 0.638060 4:-53039738 None:intergenic
TCAGAGGAGTCTAAGCCAGA+GGG 0.640445 4:+53040421 MsaT020490.1:CDS
GATTGCTGTCAAAAGCAGTA+GGG 0.640599 4:-53046117 None:intergenic
CAGTTCAGAAAAGAAGCTTG+TGG 0.640652 4:+53040537 MsaT020490.1:CDS
GTACATATCAGTTACACAGA+AGG 0.642400 4:+53044437 MsaT020490.1:CDS
CCAATAGTTCCGGACGATGG+CGG 0.642923 4:-53038332 None:intergenic
TTGCACTCTGGACAATACCA+TGG 0.645516 4:-53039286 None:intergenic
GATGAACATGAACCTGCTGT+TGG 0.645886 4:+53038182 MsaT020490.1:CDS
GAACACGCGAAAGGAATCAG+AGG 0.645909 4:+53038979 MsaT020490.1:CDS
ATCAAAAGGTGAAATTGATG+AGG 0.650693 4:+53038223 MsaT020490.1:CDS
ATAGTAATTTATGTACGACA+TGG 0.653578 4:-53040347 None:intergenic
TTGGAGCAAGTAACTTGGCA+TGG 0.654122 4:-53045068 None:intergenic
AAGGAAAGTATGTGGTGGCG+CGG 0.654909 4:+53043403 MsaT020490.1:CDS
TGGAACATTTAATGATACGA+GGG 0.655910 4:+53045808 MsaT020490.1:CDS
CTGCATAGGCCAATGTACCA+TGG 0.656065 4:+53039743 MsaT020490.1:CDS
TCGTCCAAGGAAACGACGAA+AGG 0.657244 4:+53037815 MsaT020490.1:CDS
ACGGTTGATTGATGCCGAAG+TGG 0.657832 4:-53045319 None:intergenic
ACTTGAAGGAGGACGTAAAG+GGG 0.658392 4:-53039867 None:intergenic
ACACCTTGAATGATAAGCAG+AGG 0.659583 4:-53039230 None:intergenic
TCTAGACTCTCTACAAAAGG+GGG 0.659716 4:+53045012 MsaT020490.1:CDS
AAGGCATGTTAAGCATGAAG+GGG 0.663207 4:+53045985 MsaT020490.1:CDS
AAACTGCCATGCAAATACCA+TGG 0.664505 4:-53039760 None:intergenic
AGAATTCTGAAAGTTCATGT+CGG 0.664820 4:-53040128 None:intergenic
ACACCAATAGTTCCGGACGA+TGG 0.665927 4:-53038335 None:intergenic
ATCAACATCTCCATCCCCAG+TGG 0.666774 4:-53039143 None:intergenic
GAATCAGAGTAAGGACACAC+AGG 0.668287 4:-53045710 None:intergenic
TGGTTGTCTTCACTTGAAGG+AGG 0.668622 4:-53039878 None:intergenic
TGGTGGAGTTGATTTGTCCG+GGG 0.668634 4:+53046219 MsaT020490.1:CDS
AATTCGTCCGATACTTGTCA+GGG 0.668756 4:+53038043 MsaT020490.1:CDS
GAAATTGGTTCATGCCAAGG+AGG 0.672211 4:-53046394 None:intergenic
AAAGGGAACCTCACTTAGAG+GGG 0.674815 4:+53039336 MsaT020490.1:CDS
GGTTGGTATATGGAGAAGGG+TGG 0.676813 4:+53037777 None:intergenic
GGAGATGAATGTCGCCTCTG+CGG 0.679418 4:+53039172 MsaT020490.1:CDS
ATGGTTCCAAGGAAAGTATG+TGG 0.679574 4:+53043395 MsaT020490.1:CDS
TACCTGGAGTGCCAGCTGTG+AGG 0.680126 4:-53044000 None:intergenic
TTGAAAGCCTGTCATCTGAG+GGG 0.685647 4:+53038537 MsaT020490.1:CDS
AAGCATGAAGGGGATGACGA+TGG 0.688494 4:+53045995 MsaT020490.1:CDS
ATTGGGAATCAAACTCGCAG+TGG 0.690567 4:-53039939 None:intergenic
ATTGATGAGGATGAAGACGA+CGG 0.693843 4:+53038236 MsaT020490.1:CDS
GTTCCAAGGAAAGTATGTGG+TGG 0.697533 4:+53043398 MsaT020490.1:CDS
TGTAAAGAAAGAACATTCTG+GGG 0.698066 4:+53045772 MsaT020490.1:CDS
AGATGCTGCTAAGTACTCTG+TGG 0.702605 4:+53040171 MsaT020490.1:CDS
CTTCTGCGCTCAGATGATGA+CGG 0.707191 4:+53046190 MsaT020490.1:CDS
TCGTCCAGAGCAGAACACAC+AGG 0.712158 4:+53044147 MsaT020490.1:CDS
GGGTTCCGTCCATACCGCAG+AGG 0.716316 4:-53039186 None:intergenic
GATGTTCCAAGAGAGAGGTG+TGG 0.755875 4:+53040559 MsaT020490.1:CDS
TGCTGGTACAGAAACCACTG+GGG 0.813809 4:+53039129 MsaT020490.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 53037786 53046462 53037786 ID=MsaG020490
Chr4 mRNA 53037786 53046462 53037786 ID=MsaT020490.1;Parent=MsaG020490
Chr4 exon 53037786 53038585 53037786 ID=MsaT020490.1.exon1;Parent=MsaT020490.1
Chr4 CDS 53037786 53038585 53037786 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53038763 53039422 53038763 ID=MsaT020490.1.exon2;Parent=MsaT020490.1
Chr4 CDS 53038763 53039422 53038763 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53039655 53040870 53039655 ID=MsaT020490.1.exon3;Parent=MsaT020490.1
Chr4 CDS 53039655 53040870 53039655 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53043217 53043499 53043217 ID=MsaT020490.1.exon4;Parent=MsaT020490.1
Chr4 CDS 53043217 53043499 53043217 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53043895 53044019 53043895 ID=MsaT020490.1.exon5;Parent=MsaT020490.1
Chr4 CDS 53043895 53044019 53043895 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53044106 53044560 53044106 ID=MsaT020490.1.exon6;Parent=MsaT020490.1
Chr4 CDS 53044106 53044560 53044106 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53044654 53044682 53044654 ID=MsaT020490.1.exon7;Parent=MsaT020490.1
Chr4 CDS 53044654 53044682 53044654 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53044977 53045528 53044977 ID=MsaT020490.1.exon8;Parent=MsaT020490.1
Chr4 CDS 53044977 53045528 53044977 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Chr4 exon 53045618 53046462 53045618 ID=MsaT020490.1.exon9;Parent=MsaT020490.1
Chr4 CDS 53045618 53046462 53045618 ID=cds.MsaT020490.1;Parent=MsaT020490.1
Gene Sequence

>MsaT020490.1

ATGGAGAAGGGTGGTGGGAAACCGAGGGGTCGTCCAAGGAAACGACGAAAGGAGGAGGAAGAGAAGAAGGAAGGGAAATTGGTTAATGAAGCTAAGAGGCAAGCAGTTGAGACGAAACCGATTCCGTTGGTTGGGAGGTATGTGCTGAAAGAGTTTCCTAGAAACGGTGTTTTTCTAGGTAAAGTTGTTTATTACGAAAGTGGTTTATACAGGGTTAATTATGAAGACGGTGATTTTGAAGATTTAGAGAGTGTTGAAATTCGTCCGATACTTGTCAGGGACGATAATTTTGATGGTAGTTTAGTTAAGAGAAGAAATAAGTTGGATAAATTAGTGTTGCAGAATAGTGCTAAGGTTGCAAATAAGGCTGATAAGGGTTCATTGAAATCTCAAAAAGATGAACATGAACCTGCTGTTGGTGCAACTGATCCGTGTGAATCAAAAGGTGAAATTGATGAGGATGAAGACGACGGAGATGATGCGGATTTGTCAAGTGGCTCTGTTTCTAATGTTGAGACAGTGCCTTTGCCTCCACCATTGCATTTGCCGCCATCGTCCGGAACTATTGGTGTGCCTGAGCCGAGTGTCTCACACCTCCTATCTGTGTATGGGTTTTTGAGATCGTTCAGCACCCGATTGTTTCTTCATCCTTTTACTTTGGATGATTTTGTTGGTGCCCTGAATTATCAAGGGCCAAGCACTTTGTTTGACGCAATTCATCTTTCTCTGATGCGGGTGTTGAGGCGTCATCTTGAAAGCCTGTCATCTGAGGGGTTTGAGCTTGCATCACAATGTCTTAGGTGCAACGATTGGAGCTTGCTCGATACGTTGACTTGGTCCGTTTTTGTGATTCTATATTTGGTGGTCAATGGGTACACAAAAGGACCTGAATGGAAAGGATTTTATGATGAGTTTTTTAGCAGCGAGTATTATTTGTTGCCTGTAAGTAGGAAGTTAATGATTCTGCAAATTCTTTGTGATGATGTTTTGGAATCTGAGGAGCTAAAAACTGAAATGAACACGCGAAAGGAATCAGAGGTCGGGATGGATGATGATGCAGAAGATATCGTTCCTGCAGAAACTGGCCCCAGAAAAGTCTATCCAAGATATACCAGGACCTCTTTTTGTGAGGATAAAGAAGCTGTGAAATTGGTTTCAGCATCAAATGCTGGTACAGAAACCACTGGGGATGGAGATGTTGATAGAAATGGAGATGAATGTCGCCTCTGCGGTATGGACGGAACCCTTATTTGTTGTGACGGTTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGATGAAAATGTTTATACCAGAAGGGCCATGGTATTGTCCAGAGTGCAAAATTGATATGGCTGGGCCTACAATTGCAAAGGGAACCTCACTTAGAGGGGCTGAAGTATTTGGGAAGGATTTGTATGGGCAGCTCTTCATGGGTACATGCGACCACTTACTTGTGCTTAACTTTGAGAACAATGAAGTTTGTCTTAGATATTACAATCAGAAGGACATCCCTAAAGTTGTCCAAGTGCTTTATGAATCCATGCTGCATAGGCCAATGTACCATGGTATTTGCATGGCAGTTTTACAATATTGGAATATTTCAGAAAACTTCTTACCTCTTTGTGCTTCAATTGAAACAAATTTAAAGGATGAGACAAAATTTTCTTCCCCTTTACGTCCTCCTTCAAGTGAAGACAACCATACACCTGTTAGTTTGGTCAAGGTAGAGAACTCTCCAACCACTGCGAGTTTGATTCCCAATGATAATATGGTGCCTTCTCTTGATGCTTTGCAAATTATCCCTCAAAGTCTTGCTTTTAATAGCAGTGGCATTGATAGAAGTGAAGAGGGCCTTATTGTAAATAAGAAGCTTTCTGAGGAAATTAAGACGGAGGCAATAATTTCAGCTGGTTCTGTTAGTCATCCATCCGACATGAACTTTCAGAATTCTGTCAATATGTCAACTGCAGTAGATGCTGCTAAGTACTCTGTGGTAAACAGTCAATCAAGTAATTGTGGCCATGCAAATGATATGGAGTTGCCTTCAAATTTTTCTTTGCAAAACAAAGAAAACACCCAAGTAGGTTTTGGAAAGTGTGAACGCACTGCAAGTGATGATTTTTGTTACATGGGTTTCTCCTTTAAACCCATGTCGTACATAAATTACTATATGCATGGTGAATTTTCTGCATCAGCAGCTGCCAAATTTGCATCTGATTCTTCAGAGGAGTCTAAGCCAGAGGGTCATGCGTCAGACAGCCAGAAGAAAACATTATCTGCATACACTTATTTGCAAGCAAAATCATTCTCCCAAGTAGCTTCACGTTTCTTTTGGCCCAGTTCAGAAAAGAAGCTTGTGGATGTTCCAAGAGAGAGGTGTGGTTGGTGTCTTTCCTGTAAAGCCAATGTTGTTAGCAAGAGAGGGTGCATGTTAAATCAGTCTCTTATAATTGCCACAAAAAGTGCTATGAAAACCCTTGCTATATTACCTCCTTTAAGGAATGGAGAGGGAATTCTTCCTAGTACCATTGCAACTTACATTTTATATATGGAGAGATGTTTGCATGGTTTAGTCGTTGGACCCTTCGTAAATGCAAGCTATAGAGAGAACTGGCGTGAGCAAGTTAAACAAGCCACAACATTTAGTGCTATCAAGCCACTTCTACTTAAACTTGAGGAGAACATTCGAATCGTTGCTTTTTGTGGGGACTGGGTTAAGCTGACGGATGATCACTTAGTTGAATTTTCCAACATCAAAAGTGCCACATCTACTCAAGGAACAACTCAGAAACGTGCACCAAGTGGAAGGCGTTCTAAAAAGAGGTCATCTAGTGATGAAGCTACAGATGATGGTTCCAAGGAAAGTATGTGGTGGCGCGGTGGAAGGTTTTCAAGATTTATATCTCAGAATATAACTGTGCCCAAATCAATGGTCCGAAAAGCAGCTCGCCAAGGTGGTTCGAGGAAAATTTCTGGTATTTTCTATGCTGATGAATCTGAAATTCCCAAAAGAAGTAGACAGCTTGTCTGGAGAGTCGCAGTTGAAATGAGTAGGAATGCCTCACAGCTGGCACTCCAGGTCAGATATCTAGATTTTTATCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACACACAGGACGGGAAAGGCCAAGAGACCGAAGCTTCTGCTTTCCGAAATGCAAACATTTGTGACAAAAAACTTGTACAGGGAAAAATTTGTTACGGGATAATTTTTGGGAGCCAAAAGCATCTTCCTATTAGGGTGATGAAAAGTGCTGTTGAAACAGAGCAAGGGCCGGAAGGAAGAGAAAAGTATTGGTTTTTTGAAAATCGCATTCCTTTATATTTGGTAAAAGAGTATGAAGAAGGTAATGAAAAGGCTCCATGTGAAGAGTACTATAGTGGTACATATCAGTTACACAGAAGGCAGTTGAAATGTTCCTGCAATGACATATTCTTTTACCTCATTTGCAAGAGAGACAACTTGGCATACTCGTGTTCTTCATGTCAGATGGCCATTTCAATTCGGTATGCTCACAAGTGCAATGCATGTCAAGGTTATTGTCACAAGGACTGTTCCATAAGTTCAGTCTCTAGACTCTCTACAAAAGGGGGAGTTGAATGCTTGACAACATGCAAACAATGTCACCATGCCAAGTTACTTGCTCCAAACATAACTAGTGATGAATCTCCAACAAGTCCCTTAATCTTACAAGGACAGGAAAACAGCTCTGGGACTAGTTTTAAGGGAGCAAGGCCAAAGACCAGTCATTCTGATATGAAACAAGTTAACTCCAAGTCAGTTTCGAAAGGATCAAAGCGTAAATGTCAGGATCAAACTTTGACTTCTACCAGGAAAAAGAATGGTCATCCTGAGACAAAACTAGCCGAGTCTGATTCCACTTCGGCATCAATCAACCGTCGCAACAATAATTGTTCTTGGGGTGTTATCTGGAAAAAGAAAATGAACGAAGATAACTTTAATTTTGTGATCAAAAACATACTTTTCAGGGGAGCGTCAGACATACCTGATTCGGGACCTACTTGTCACTTGTGTGGAAAGGCATATAGGTCGGATCTAATGTATATTTGCTGCGAAACATGCCAAAATTGGTTTCATGCTGAAGCTGTTGAACTTGAAGAATCTCAAATTTCGGCCATGTTGGGCTTTAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTCTGATTCAAAACCTAAGTCAGAAGTTAAGAAACCACGCAAAAGGACTGTAAAGAAAGAACATTCTGGGGCCAATTCTGATTCTGGAACATTTAATGATACGAGGGAGTGTGAACCTGCTACTCCTGTCTATCCTGTGGGAAATGATCATTTAACTTACTCTCTTGAAAATGTTGAGCTGATTACAGAGCGTAATAAATTAGATTCGGATGTCGAGTGGAACACTGTTTCTGTGCCAGGGCCTCGGAAATTACCAGTGAGAAGGCATGTTAAGCATGAAGGGGATGACGATGGTTCTGTTGCAGGAATTCCTTTACAAGCTGAATTTCCAACATACAGTGAAGCAAGTTATCTGTCCAATCCAGCAGATTCAACATTACCTTTAGAATACGACCCTACTGCTTTTGACAGCAATCTGATGATTGATTTTGAAGACAATAACAATACCATCTTCGATACAAATGAACTTCTGCGCTCAGATGATGACGGCCAGATTGGTGGAGTTGATTTGTCCGGGGAATTGTTGGAATATGATTTTGACAATTTTGACACCGCTAATCTTGAAGAATTTGGAGATGGTAGTTTTAGTTGTTGTGTATGTCTTCAAGGTGAACCAGGCCCTGATCTTTTTTGTGAGACTTGCGGGACTTTGATGCACAGCCATTGTTTGCCTCCTTGGCATGAACCAATTTCTGATCCGGAACATTGGAGGTGTCTGACTTGCCGGGATTGGCAATAA
Protein sequence

>MsaT020490.1

MEKGGGKPRGRPRKRRKEEEEKKEGKLVNEAKRQAVETKPIPLVGRYVLKEFPRNGVFLGKVVYYESGLYRVNYEDGDFEDLESVEIRPILVRDDNFDGSLVKRRNKLDKLVLQNSAKVANKADKGSLKSQKDEHEPAVGATDPCESKGEIDEDEDDGDDADLSSGSVSNVETVPLPPPLHLPPSSGTIGVPEPSVSHLLSVYGFLRSFSTRLFLHPFTLDDFVGALNYQGPSTLFDAIHLSLMRVLRRHLESLSSEGFELASQCLRCNDWSLLDTLTWSVFVILYLVVNGYTKGPEWKGFYDEFFSSEYYLLPVSRKLMILQILCDDVLESEELKTEMNTRKESEVGMDDDAEDIVPAETGPRKVYPRYTRTSFCEDKEAVKLVSASNAGTETTGDGDVDRNGDECRLCGMDGTLICCDGCPSAYHSRCIGVMKMFIPEGPWYCPECKIDMAGPTIAKGTSLRGAEVFGKDLYGQLFMGTCDHLLVLNFENNEVCLRYYNQKDIPKVVQVLYESMLHRPMYHGICMAVLQYWNISENFLPLCASIETNLKDETKFSSPLRPPSSEDNHTPVSLVKVENSPTTASLIPNDNMVPSLDALQIIPQSLAFNSSGIDRSEEGLIVNKKLSEEIKTEAIISAGSVSHPSDMNFQNSVNMSTAVDAAKYSVVNSQSSNCGHANDMELPSNFSLQNKENTQVGFGKCERTASDDFCYMGFSFKPMSYINYYMHGEFSASAAAKFASDSSEESKPEGHASDSQKKTLSAYTYLQAKSFSQVASRFFWPSSEKKLVDVPRERCGWCLSCKANVVSKRGCMLNQSLIIATKSAMKTLAILPPLRNGEGILPSTIATYILYMERCLHGLVVGPFVNASYRENWREQVKQATTFSAIKPLLLKLEENIRIVAFCGDWVKLTDDHLVEFSNIKSATSTQGTTQKRAPSGRRSKKRSSSDEATDDGSKESMWWRGGRFSRFISQNITVPKSMVRKAARQGGSRKISGIFYADESEIPKRSRQLVWRVAVEMSRNASQLALQVRYLDFYLRWSDLIRPEQNTQDGKGQETEASAFRNANICDKKLVQGKICYGIIFGSQKHLPIRVMKSAVETEQGPEGREKYWFFENRIPLYLVKEYEEGNEKAPCEEYYSGTYQLHRRQLKCSCNDIFFYLICKRDNLAYSCSSCQMAISIRYAHKCNACQGYCHKDCSISSVSRLSTKGGVECLTTCKQCHHAKLLAPNITSDESPTSPLILQGQENSSGTSFKGARPKTSHSDMKQVNSKSVSKGSKRKCQDQTLTSTRKKNGHPETKLAESDSTSASINRRNNNCSWGVIWKKKMNEDNFNFVIKNILFRGASDIPDSGPTCHLCGKAYRSDLMYICCETCQNWFHAEAVELEESQISAMLGFKCCKCRRIKSPVCPYSDSKPKSEVKKPRKRTVKKEHSGANSDSGTFNDTRECEPATPVYPVGNDHLTYSLENVELITERNKLDSDVEWNTVSVPGPRKLPVRRHVKHEGDDDGSVAGIPLQAEFPTYSEASYLSNPADSTLPLEYDPTAFDSNLMIDFEDNNNTIFDTNELLRSDDDGQIGGVDLSGELLEYDFDNFDTANLEEFGDGSFSCCVCLQGEPGPDLFCETCGTLMHSHCLPPWHEPISDPEHWRCLTCRDWQ*