AlfalfaGEDB | MsaG020527

M. sativa ssp. caerulea / MsaG020527

KEGG: K08832
GO: -
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020527	XP_013455901.1	97.422	543	14	0	1	543	1	543	0.0	1105

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020527	sp\|P36616\|DSK1_SCHPO	42.683	492	228	8	12	478	54	516	4.47e-129	390

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020527	tr\|A0A072UJU0\|A0A072UJU0_MEDTR	97.422	543	14	0	1	543	1	543	0.0	1105

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000172	MsaG020527	0.810244	2.170812e-50	3.729238e-48
MsaG000476	MsaG020527	0.820009	1.506388e-52	3.313931e-50
MsaG001496	MsaG020527	0.849683	5.251263e-60	2.815654e-57
MsaG003596	MsaG020527	0.806450	1.386387e-49	2.174642e-47
MsaG003749	MsaG020527	0.935442	2.389703e-96	1.523519e-91
MsaG004217	MsaG020527	0.827206	3.171651e-54	8.482141e-52
MsaG004347	MsaG020527	0.801711	1.327675e-48	1.865855e-46
MsaG004446	MsaG020527	0.853291	5.062850e-61	3.077453e-58
MsaG004475	MsaG020527	0.812614	6.674449e-51	1.215291e-48
MsaG004458	MsaG020527	0.882457	2.185546e-70	4.426682e-67
MsaG004507	MsaG020527	0.903840	5.358837e-79	3.442786e-75
MsaG004940	MsaG020527	0.822428	4.195289e-53	9.841567e-51
MsaG004973	MsaG020527	0.841694	7.552193e-58	3.109976e-55
MsaG005214	MsaG020527	0.809230	3.578221e-50	5.997691e-48
MsaG005277	MsaG020527	0.843495	2.524523e-58	1.101409e-55
MsaG005577	MsaG020527	0.825964	6.252288e-54	1.615365e-51
MsaG005960	MsaG020527	0.821993	5.288565e-53	1.226222e-50
MsaG006133	MsaG020527	0.821208	8.012035e-53	1.819406e-50
MsaG006283	MsaG020527	0.902817	1.532996e-78	9.262081e-75
MsaG006564	MsaG020527	0.810475	1.936252e-50	3.345157e-48
MsaG006618	MsaG020527	0.844581	1.295321e-58	5.853959e-56
MsaG006774	MsaG020527	0.804061	4.363271e-49	6.472756e-47
MsaG006861	MsaG020527	0.812027	8.950168e-51	1.606143e-48
MsaG006933	MsaG020527	0.803274	6.343567e-49	9.240237e-47
MsaG007000	MsaG020527	0.836280	1.876537e-56	6.531954e-54
MsaG007159	MsaG020527	0.818606	3.133151e-52	6.643021e-50
MsaG007544	MsaG020527	0.809437	3.232132e-50	5.445134e-48
MsaG008036	MsaG020527	0.823118	2.903540e-53	6.939414e-51
MsaG009265	MsaG020527	0.816343	1.008080e-51	2.016260e-49
MsaG011366	MsaG020527	0.910498	4.245045e-82	4.142919e-78
MsaG011470	MsaG020527	0.801231	1.662608e-48	2.311226e-46
MsaG011482	MsaG020527	0.825938	6.344264e-54	1.637914e-51
MsaG011889	MsaG020527	0.883024	1.359664e-70	2.830693e-67
MsaG011971	MsaG020527	0.823665	2.166456e-53	5.255369e-51
MsaG012230	MsaG020527	0.823633	2.203893e-53	5.341585e-51
MsaG012372	MsaG020527	0.838995	3.803658e-57	1.438921e-54
MsaG016293	MsaG020527	0.808785	4.450262e-50	7.380403e-48
MsaG017298	MsaG020527	0.880267	1.334841e-69	2.438959e-66
MsaG017656	MsaG020527	0.862624	8.802695e-64	7.570184e-61
MsaG017942	MsaG020527	0.849218	7.067463e-60	3.729911e-57
MsaG017984	MsaG020527	0.842352	5.069286e-58	2.131930e-55
MsaG018044	MsaG020527	0.823707	2.118000e-53	5.143751e-51
MsaG018496	MsaG020527	0.804854	2.986911e-49	4.513107e-47
MsaG018874	MsaG020527	0.809144	3.731835e-50	6.242698e-48
MsaG019115	MsaG020527	0.800903	1.939062e-48	2.675670e-46
MsaG019724	MsaG020527	0.832001	2.191389e-55	6.719520e-53
MsaG020527	MsaG021389	0.808470	5.193540e-50	8.547822e-48
MsaG020527	MsaG021576	0.807344	8.988884e-50	1.439982e-47
MsaG020527	MsaG021904	0.822796	3.448287e-53	8.170324e-51
MsaG020527	MsaG022021	0.832833	1.365704e-55	4.290022e-53
MsaG020527	MsaG022065	0.916117	6.550724e-85	9.325928e-81
MsaG020527	MsaG022407	0.808734	4.563068e-50	7.558394e-48
MsaG020527	MsaG022486	0.891377	9.286501e-74	2.941530e-70
MsaG020527	MsaG022806	0.808885	4.238159e-50	7.045639e-48
MsaG020527	MsaG023654	0.823949	1.860418e-53	4.547549e-51
MsaG020527	MsaG024037	0.822386	4.290492e-53	1.005379e-50
MsaG020527	MsaG024222	0.821224	7.947408e-53	1.805454e-50
MsaG020527	MsaG024836	0.840781	1.309561e-57	5.238850e-55
MsaG020527	MsaG025240	0.834584	5.012875e-56	1.658394e-53
MsaG020527	MsaG027249	0.853175	5.464539e-61	3.308014e-58
MsaG020527	MsaG027661	0.820414	1.217866e-52	2.708067e-50
MsaG020527	MsaG027732	0.804881	2.948786e-49	4.458278e-47
MsaG020527	MsaG027750	0.818724	2.947396e-52	6.268182e-50
MsaG020527	MsaG028031	0.842616	4.316544e-58	1.830908e-55
MsaG020527	MsaG028227	0.801366	1.561210e-48	2.176953e-46
MsaG020527	MsaG028246	0.820255	1.323569e-52	2.930959e-50
MsaG020527	MsaG029031	0.832209	1.947532e-55	6.007600e-53
MsaG020527	MsaG029217	0.856658	5.385973e-62	3.695984e-59
MsaG020527	MsaG029473	0.847169	2.585677e-59	1.273397e-56
MsaG020527	MsaG029548	0.886277	8.510646e-72	2.075804e-68
MsaG020527	MsaG029619	0.847377	2.268342e-59	1.124918e-56
MsaG020527	MsaG029653	0.874320	1.528973e-67	2.134349e-64
MsaG020527	MsaG029763	0.821473	6.966604e-53	1.593077e-50
MsaG020527	MsaG030359	0.806619	1.277835e-49	2.012328e-47
MsaG020527	MsaG031218	0.844171	1.667557e-58	7.435702e-56
MsaG020527	MsaG034046	0.825304	8.950862e-54	2.270473e-51
MsaG020527	MsaG034305	0.800046	2.893454e-48	3.916161e-46
MsaG020527	MsaG035059	0.856019	8.274648e-62	5.546786e-59
MsaG020527	MsaG034996	0.866840	4.271940e-65	4.346971e-62
MsaG020527	MsaG035062	0.823720	2.103528e-53	5.110298e-51
MsaG020527	MsaG040425	0.860420	4.113438e-63	3.250355e-60
MsaG020527	MsaG040546	0.816993	7.218283e-52	1.468044e-49
MsaG020527	MsaG041112	0.858025	2.133685e-62	1.540013e-59
MsaG020527	MsaG041285	0.882785	1.661028e-70	3.418523e-67
MsaG020527	MsaG042398	0.893682	1.118879e-74	4.012102e-71
MsaG020527	MsaG044227	0.847361	2.292171e-59	1.136067e-56
MsaG020527	MsaG044788	0.840001	2.088732e-57	8.154345e-55
MsaG020527	MsaG044854	0.836238	1.923185e-56	6.685756e-54
MsaG020527	MsaG045105	0.890317	2.419739e-73	7.250285e-70
MsaG020527	MsaG045239	0.836962	1.259999e-56	4.476681e-54
MsaG020527	MsaG046055	0.825892	6.504125e-54	1.677036e-51
MsaG020527	MsaG046164	0.843977	1.878958e-58	8.324110e-56
MsaG020527	MsaG046530	0.866490	5.513502e-65	5.529616e-62
MsaG020527	MsaG046861	0.858441	1.606105e-62	1.177458e-59
MsaG020527	MsaG047187	0.830479	5.163668e-55	1.514905e-52
MsaG020527	MsaG002250	0.910678	3.472553e-82	3.431500e-78
MsaG020527	MsaG002398	0.801801	1.272226e-48	1.791657e-46
MsaG020527	MsaG000676	0.842190	5.593888e-58	2.340261e-55
MsaG020527	MsaG003009	0.860793	3.174457e-63	2.544140e-60
MsaG020527	MsaG008206	0.822555	3.922030e-53	9.232100e-51
MsaG020527	MsaG009665	0.802666	8.460868e-49	1.215312e-46
MsaG020527	MsaG010140	0.843261	2.912616e-58	1.261213e-55
MsaG020527	MsaG013226	0.819071	2.459526e-52	5.278684e-50
MsaG020527	MsaG014237	0.854939	1.703104e-61	1.097813e-58
MsaG020527	MsaG014177	0.806101	1.640621e-49	2.552167e-47
MsaG020527	MsaG028467	0.855798	9.595418e-62	6.380387e-59
MsaG020527	MsaG027479	0.807357	8.933268e-50	1.431508e-47
MsaG020527	MsaG027608	0.858873	1.195253e-62	8.904465e-60
MsaG020527	MsaG027534	0.844093	1.749411e-58	7.780816e-56
MsaG020527	MsaG026750	0.894558	4.940021e-75	1.857657e-71
MsaG020527	MsaG033253	0.841331	9.401704e-58	3.827175e-55
MsaG020527	MsaG033515	0.835296	3.321995e-56	1.122636e-53
MsaG020527	MsaG032134	0.843338	2.779281e-58	1.206453e-55
MsaG020527	MsaG033089	0.818324	3.627966e-52	7.635835e-50
MsaG020527	MsaG031454	0.856132	7.673500e-62	5.165104e-59
MsaG020527	MsaG030747	0.888473	1.249626e-72	3.403248e-69
MsaG020527	MsaG030908	0.885641	1.472776e-71	3.480043e-68
MsaG020527	MsaG031914	0.800350	2.511070e-48	3.422059e-46
MsaG020527	MsaG040848	0.844532	1.334691e-58	6.022150e-56
MsaG020527	MsaG037249	0.806796	1.172598e-49	1.854278e-47
MsaG020527	MsaG036565	0.825250	9.214994e-54	2.333976e-51
MsaG020527	MsaG040777	0.870970	1.990605e-66	2.403534e-63
MsaG020527	MsaG036671	0.824879	1.126901e-53	2.825327e-51
MsaG020527	MsaG036786	0.823334	2.586799e-53	6.218938e-51
MsaG020527	MsaG035247	0.801292	1.616441e-48	2.250168e-46
MsaG020527	MsaG038588	0.826860	3.834430e-54	1.015618e-51
MsaG020527	MsaG043298	0.856920	4.513814e-62	3.127082e-59
MsaG020527	MsaG042836	0.811732	1.037019e-50	1.847523e-48
MsaG020527	MsaG042299	0.805022	2.756801e-49	4.181699e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020527	MtrunA17_Chr4g0027671	97.422	543	14	0	1	543	1	543	0.0	1105
MsaG020527	MtrunA17_Chr2g0320631	76.909	537	115	4	8	542	9	538	0.0	811
MsaG020527	MtrunA17_Chr1g0179611	67.547	530	166	2	7	536	12	535	0.0	757
MsaG020527	MtrunA17_Chr5g0407121	50.540	463	164	5	18	479	17	415	3.02e-163	471
MsaG020527	MtrunA17_Chr8g0370321	47.835	508	176	7	20	526	19	438	4.53e-161	466
MsaG020527	MtrunA17_Chr3g0139371	35.795	176	104	5	5	180	43	209	6.81e-25	107
MsaG020527	MtrunA17_Chr3g0139371	31.609	174	92	3	319	478	238	398	1.55e-22	100
MsaG020527	MtrunA17_Chr3g0116701	36.306	157	93	4	24	180	80	229	5.04e-23	101
MsaG020527	MtrunA17_Chr3g0116701	30.769	169	100	3	319	478	259	419	9.73e-18	85.9
MsaG020527	MtrunA17_Chr4g0058241	35.669	157	94	4	24	180	84	233	3.47e-22	99.4
MsaG020527	MtrunA17_Chr4g0058241	29.586	169	102	3	319	478	263	423	6.42e-16	80.1
MsaG020527	MtrunA17_Chr6g0480541	32.143	168	100	4	317	479	1043	1201	4.98e-21	97.8
MsaG020527	MtrunA17_Chr6g0480541	35.811	148	86	4	37	180	896	1038	6.70e-15	78.2
MsaG020527	MtrunA17_Chr8g0369241	36.879	141	83	3	39	178	139	274	1.59e-20	95.9
MsaG020527	MtrunA17_Chr8g0369241	31.280	211	96	5	317	484	283	487	1.37e-17	86.7
MsaG020527	MtrunA17_Chr5g0437131	31.638	177	103	6	317	485	546	712	5.89e-20	94.0
MsaG020527	MtrunA17_Chr5g0437131	37.162	148	84	3	37	180	401	543	4.65e-16	81.6
MsaG020527	MtrunA17_Chr3g0123491	31.176	170	107	5	14	180	66	228	7.22e-20	92.4
MsaG020527	MtrunA17_Chr3g0123491	26.554	177	101	4	319	480	260	422	1.59e-15	79.0
MsaG020527	MtrunA17_Chr1g0210061	32.065	184	103	7	1	178	582	749	1.52e-17	86.7
MsaG020527	MtrunA17_Chr1g0210061	35.028	177	94	6	319	480	757	927	4.78e-17	84.7
MsaG020527	MtrunA17_Chr4g0045841	32.020	203	102	10	282	480	172	342	3.55e-14	74.3
MsaG020527	MtrunA17_Chr8g0387401	31.220	205	102	9	282	480	169	340	5.78e-13	70.9
MsaG020527	MtrunA17_Chr8g0377071	30.583	206	125	6	317	518	522	713	7.14e-13	71.2
MsaG020527	MtrunA17_Chr2g0287271	32.727	220	116	12	308	517	155	352	1.18e-12	70.5
MsaG020527	MtrunA17_Chr4g0065851	32.877	219	117	11	308	517	155	352	1.32e-12	70.5
MsaG020527	MtrunA17_Chr8g0348481	30.693	202	105	8	282	479	154	324	1.83e-12	68.9
MsaG020527	MtrunA17_Chr8g0392811	30.594	219	122	10	308	517	247	444	5.02e-12	68.6
MsaG020527	MtrunA17_Chr3g0096631	31.858	226	121	9	308	524	155	356	5.64e-12	68.6
MsaG020527	MtrunA17_Chr7g0248461	29.353	201	109	8	282	479	155	325	3.68e-11	65.1
MsaG020527	MtrunA17_Chr5g0397261	29.703	202	109	8	282	480	158	329	3.76e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020527	AT3G53030.1	66.543	538	141	7	1	527	1	510	0.0	711
MsaG020527	AT3G44850.1	68.571	525	155	4	8	529	14	531	0.0	706
MsaG020527	AT5G22840.1	64.137	527	164	4	8	529	14	520	0.0	697
MsaG020527	AT4G35500.1	50.000	482	164	6	20	498	19	426	1.16e-164	475
MsaG020527	AT4G35500.2	48.033	483	173	7	20	498	19	427	5.35e-155	450
MsaG020527	AT2G17530.2	59.487	195	77	1	20	212	19	213	3.52e-78	250
MsaG020527	AT2G17530.2	64.286	98	35	0	308	405	245	342	3.29e-38	144
MsaG020527	AT2G17530.1	59.487	195	77	1	20	212	19	213	8.54e-77	249
MsaG020527	AT2G17530.1	61.047	172	67	0	308	479	245	416	1.06e-74	244
MsaG020527	AT2G17530.3	59.487	195	77	1	20	212	19	213	8.54e-77	249
MsaG020527	AT2G17530.3	61.047	172	67	0	308	479	245	416	1.06e-74	244
MsaG020527	AT4G24740.4	36.628	172	101	5	24	195	84	247	3.14e-24	103
MsaG020527	AT4G32660.2	37.107	159	93	4	22	180	55	206	4.62e-24	103
MsaG020527	AT4G32660.2	40.594	101	53	3	319	418	235	329	7.76e-15	76.6
MsaG020527	AT4G24740.3	36.628	172	101	5	24	195	84	247	4.87e-24	103
MsaG020527	AT4G24740.3	40.230	87	46	1	319	405	263	343	1.30e-14	75.9
MsaG020527	AT4G32660.3	37.107	159	93	4	22	180	47	198	6.15e-24	104
MsaG020527	AT4G32660.3	33.140	172	97	5	319	480	227	390	7.34e-19	89.4
MsaG020527	AT4G32660.1	37.107	159	93	4	22	180	55	206	6.33e-24	104
MsaG020527	AT4G32660.1	33.140	172	97	5	319	480	235	398	7.87e-19	89.4
MsaG020527	AT4G24740.7	36.628	172	101	5	24	195	46	209	6.45e-24	104
MsaG020527	AT4G24740.7	30.636	173	97	5	319	479	225	386	2.33e-18	87.8
MsaG020527	AT4G24740.1	36.628	172	101	5	24	195	84	247	8.64e-24	104
MsaG020527	AT4G24740.1	30.636	173	97	5	319	479	263	424	3.01e-18	87.8
MsaG020527	AT1G73460.2	32.738	168	99	4	317	479	1003	1161	3.68e-22	101
MsaG020527	AT1G73460.2	35.135	148	87	4	37	180	856	998	4.75e-14	75.9
MsaG020527	AT1G73460.1	32.738	168	99	4	317	479	1003	1161	3.68e-22	101
MsaG020527	AT1G73460.1	35.135	148	87	4	37	180	856	998	4.75e-14	75.9
MsaG020527	AT1G73450.1	32.738	168	99	4	317	479	986	1144	3.82e-22	101
MsaG020527	AT1G73450.1	35.135	148	87	4	37	180	839	981	4.60e-14	75.9
MsaG020527	AT5G35980.1	36.913	149	88	3	39	186	122	265	4.74e-22	101
MsaG020527	AT5G35980.1	32.558	215	89	6	317	484	265	470	1.33e-18	90.1
MsaG020527	AT5G35980.3	36.913	149	88	3	39	186	87	230	5.11e-22	100
MsaG020527	AT5G35980.3	29.762	252	118	7	317	521	230	469	1.80e-18	89.7
MsaG020527	AT5G35980.2	36.913	149	88	3	39	186	122	265	8.27e-22	100
MsaG020527	AT5G35980.2	29.762	252	118	7	317	521	265	504	1.16e-18	90.1
MsaG020527	AT4G24740.5	37.086	151	88	4	45	195	1	144	1.56e-21	94.4
MsaG020527	AT4G24740.5	40.230	87	46	1	319	405	160	240	5.04e-15	75.5
MsaG020527	AT2G40120.1	32.934	167	102	4	318	481	407	566	2.38e-21	98.2
MsaG020527	AT2G40120.1	35.135	148	87	3	37	180	259	401	2.33e-14	76.3
MsaG020527	AT4G24740.6	37.086	151	88	4	45	195	1	144	3.10e-21	95.1
MsaG020527	AT4G24740.6	30.636	173	97	5	319	479	160	321	1.12e-18	87.8
MsaG020527	AT4G24740.9	37.086	151	88	4	45	195	1	144	3.10e-21	95.1
MsaG020527	AT4G24740.9	30.636	173	97	5	319	479	160	321	1.12e-18	87.8
MsaG020527	AT4G24740.2	37.086	151	88	4	45	195	1	144	3.10e-21	95.1
MsaG020527	AT4G24740.2	30.636	173	97	5	319	479	160	321	1.12e-18	87.8
MsaG020527	AT3G53570.1	35.032	157	95	4	24	180	101	250	2.00e-20	94.7
MsaG020527	AT3G53570.1	30.857	175	97	5	318	479	281	444	2.04e-19	91.7
MsaG020527	AT3G53570.4	35.032	157	95	4	24	180	101	250	2.00e-20	94.7
MsaG020527	AT3G53570.4	30.857	175	97	5	318	479	281	444	2.04e-19	91.7
MsaG020527	AT3G53570.2	35.032	157	95	4	24	180	101	250	2.00e-20	94.7
MsaG020527	AT3G53570.2	30.857	175	97	5	318	479	281	444	2.04e-19	91.7
MsaG020527	AT3G53570.3	35.032	157	95	4	24	180	87	236	2.04e-20	94.7
MsaG020527	AT3G53570.3	30.857	175	97	5	318	479	267	430	2.08e-19	91.7
MsaG020527	AT3G53570.5	35.032	157	95	4	24	180	87	236	2.04e-20	94.7
MsaG020527	AT3G53570.5	30.857	175	97	5	318	479	267	430	2.08e-19	91.7
MsaG020527	AT3G17750.1	31.548	168	101	4	317	479	972	1130	3.86e-20	95.1
MsaG020527	AT3G17750.1	35.135	148	87	4	37	180	825	967	1.29e-13	74.7
MsaG020527	AT4G24740.10	30.636	173	97	5	319	479	57	218	1.67e-19	87.8
MsaG020527	AT4G24740.8	30.636	173	97	5	319	479	57	218	1.67e-19	87.8
MsaG020527	AT4G32660.4	32.948	173	98	5	319	481	123	287	2.95e-19	88.6
MsaG020527	AT4G32660.4	37.000	100	57	3	81	180	1	94	1.03e-12	69.3
MsaG020527	AT3G25840.1	33.871	186	86	8	318	480	763	934	2.00e-17	86.7
MsaG020527	AT3G25840.1	32.716	162	96	6	24	179	603	757	7.33e-15	78.6
MsaG020527	AT3G25840.2	33.871	186	86	8	318	480	501	672	2.43e-17	85.9
MsaG020527	AT3G25840.2	31.677	161	99	5	24	179	341	495	2.12e-14	76.6
MsaG020527	AT1G13350.1	33.540	161	96	5	24	179	428	582	6.87e-17	84.7
MsaG020527	AT1G13350.1	30.899	178	101	5	319	480	589	760	4.47e-16	82.0
MsaG020527	AT1G13350.2	33.540	161	96	5	24	179	455	609	8.77e-17	84.3
MsaG020527	AT1G13350.2	30.899	178	101	5	319	480	616	787	5.04e-16	82.0
MsaG020527	AT3G53640.1	31.844	179	98	6	319	480	470	641	1.12e-16	84.0
MsaG020527	AT3G53640.1	30.220	182	107	6	3	179	297	463	8.93e-14	74.7
MsaG020527	AT1G13350.3	33.540	161	96	5	24	179	501	655	1.79e-16	83.6
MsaG020527	AT1G13350.3	30.899	178	101	5	319	480	662	833	7.03e-16	81.6
MsaG020527	AT3G59790.1	29.060	234	121	10	282	506	177	374	2.40e-13	72.4
MsaG020527	AT3G14720.1	31.132	212	117	8	308	510	155	346	7.54e-13	71.6
MsaG020527	AT3G14720.2	31.604	212	116	8	308	510	155	346	1.67e-12	70.1
MsaG020527	AT3G14720.3	31.604	212	116	8	308	510	155	346	1.67e-12	70.1
MsaG020527	AT1G01560.2	29.851	201	108	9	282	479	157	327	1.96e-12	69.3
MsaG020527	AT3G45640.1	30.693	202	105	9	282	479	155	325	4.08e-12	68.6
MsaG020527	AT4G01370.1	30.348	201	107	9	282	479	160	330	6.15e-12	67.8
MsaG020527	AT2G01450.3	31.797	217	117	11	308	514	146	341	7.18e-12	68.2
MsaG020527	AT2G01450.1	31.797	217	117	11	308	514	146	341	7.18e-12	68.2
MsaG020527	AT2G01450.2	31.797	217	117	11	308	514	146	341	7.18e-12	68.2
MsaG020527	AT2G01450.4	31.797	217	117	11	308	514	146	341	7.18e-12	68.2
MsaG020527	AT2G43790.1	30.542	203	105	9	282	480	180	350	2.19e-11	66.2
MsaG020527	AT3G18040.2	30.594	219	122	10	308	517	65	262	4.87e-11	65.5
MsaG020527	AT1G76540.1	28.655	171	98	5	316	482	158	308	5.16e-11	64.3
MsaG020527	AT2G46070.1	29.851	201	108	9	282	479	158	328	5.60e-11	64.7
MsaG020527	AT3G18040.4	30.909	220	120	11	308	517	262	459	5.79e-11	65.5
MsaG020527	AT3G18040.1	30.909	220	120	11	308	517	153	350	6.10e-11	65.5
MsaG020527	AT3G18040.5	30.909	220	120	11	308	517	148	345	6.31e-11	65.5
MsaG020527	AT2G46070.3	29.851	201	108	9	282	479	192	362	6.91e-11	64.7
MsaG020527	AT3G18040.3	30.909	220	120	11	308	517	262	459	8.46e-11	65.1

Find 124 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTATCCAAAACAGTAAAAT+TGG	0.157415	4:-53814553	MsaT020527.1:CDS
TTGGATCACTTCAAGCATTC+AGG	0.225873	4:-53814868	MsaT020527.1:CDS
AACTTTACTCGAAGAGCTAT+TGG	0.245290	4:+53814357	None:intergenic
CATCTATGTTGATGACTTTA+CGG	0.264587	4:+53812057	None:intergenic
AAGTGCAAGCTGGTTGATTT+TGG	0.274103	4:-53814232	MsaT020527.1:CDS
TTTCTACTGTTTGGCTTGCT+TGG	0.286757	4:-53816480	MsaT020527.1:CDS
TTCTACTGTTTGGCTTGCTT+GGG	0.313798	4:-53816479	MsaT020527.1:CDS
TTCTTATGACCATCGTTTCC+TGG	0.324044	4:+53814301	None:intergenic
AGGTGTCCTGAGGTTCTTCT+TGG	0.337399	4:-53814154	MsaT020527.1:CDS
AAGGAAAGTCCAGAGGAATC+TGG	0.359071	4:-53814454	MsaT020527.1:CDS
GTGAGGAATATATCTATTAA+TGG	0.359774	4:-53812109	MsaT020527.1:CDS
ACATCCATGAGTTGCGATTC+TGG	0.361691	4:-53812399	MsaT020527.1:CDS
AAAATGTGTTGTGAAGCTTT+TGG	0.362109	4:-53814887	MsaT020527.1:CDS
TGTTCAATCTAAGCTTGGTT+GGG	0.363107	4:-53816509	MsaT020527.1:CDS
ATCTATGTTGATGACTTTAC+GGG	0.386093	4:+53812058	None:intergenic
GATTTCCTTGGATCCTTTGA+CGG	0.395707	4:+53814631	None:intergenic
ACTTTACTCGAAGAGCTATT+GGG	0.402890	4:+53814358	None:intergenic
GCATTGATGATGGAACTTCT+TGG	0.403191	4:-53812746	MsaT020527.1:CDS
TGGATCACTTCAAGCATTCA+GGG	0.408279	4:-53814867	MsaT020527.1:CDS
ATATTCAAACAAGGCAATAT+AGG	0.414165	4:-53814174	MsaT020527.1:CDS
AATAGTCACTATATTTGATA+AGG	0.419167	4:+53814788	None:intergenic
ACAGTGGTGACAACTATGAT+AGG	0.429417	4:-53814045	MsaT020527.1:CDS
GGACAAGGAAAAGGCCGAGC+AGG	0.434320	4:-53812149	MsaT020527.1:CDS
ATCTGCTTTGAGCTTGCCAC+TGG	0.441460	4:-53814088	MsaT020527.1:CDS
TTGGTGTTTGGAAGGATAAG+TGG	0.442157	4:+53814601	None:intergenic
TTCAAGCATTCAGGGCCTAA+TGG	0.442522	4:-53814859	MsaT020527.1:CDS
TTCTTCTCCTGGTTCTTCGT+CGG	0.444681	4:+53814520	None:intergenic
TTGTTACAATTATCCTGCTC+AGG	0.444711	4:+53814415	None:intergenic
AGGAAAGTCCAGAGGAATCT+GGG	0.452844	4:-53814453	MsaT020527.1:CDS
TCAAAGGATCCAAGGAAATC+AGG	0.454737	4:-53814628	MsaT020527.1:CDS
TTGAAGTGAATGGAGAGAAA+AGG	0.457401	4:-53816637	None:intergenic
AAATGAAGGGAAAGGGTAAG+AGG	0.459156	4:-53814498	MsaT020527.1:CDS
GAATGCTCATTGATTGCATC+AGG	0.462979	4:+53812190	None:intergenic
TAATGGCGTGCATGTGTGTA+TGG	0.464665	4:-53814842	MsaT020527.1:CDS
GTTCAATCTAAGCTTGGTTG+GGG	0.469698	4:-53816508	MsaT020527.1:CDS
CAATCATCCCCAGATTCCTC+TGG	0.469706	4:+53814445	None:intergenic
GAATGAAGTAACACATTCTC+AGG	0.471207	4:+53814664	None:intergenic
TGCCAGCAGCTTCTTTCTCA+TGG	0.472338	4:+53814267	None:intergenic
TTATCCAAAACAGTAAAATT+GGG	0.472361	4:-53814552	MsaT020527.1:CDS
GATAACTTTCCTACCTTGCT+AGG	0.473221	4:+53812716	None:intergenic
TGTTGATGACTTTACGGGTC+GGG	0.473456	4:+53812063	None:intergenic
TCAGGGTCAAAATCAAGTAT+TGG	0.476440	4:+53812301	None:intergenic
TATGTTGTTCAATCTAAGCT+TGG	0.476981	4:-53816514	MsaT020527.1:CDS
AGTGGAGCACCTGATTTCCT+TGG	0.486223	4:+53814619	None:intergenic
ATAGTCACTATATTTGATAA+GGG	0.487347	4:+53814789	None:intergenic
TTCCTGCAGATTGCACTTGG+TGG	0.488149	4:-53812466	MsaT020527.1:intron
TTGTTCAATCTAAGCTTGGT+TGG	0.493944	4:-53816510	MsaT020527.1:CDS
AATGAAGGGAAAGGGTAAGA+GGG	0.494221	4:-53814497	MsaT020527.1:CDS
GGATCATCTGGCATTGATGA+TGG	0.496553	4:-53812756	MsaT020527.1:CDS
GAACCAGGAGAAGAAAATGA+AGG	0.498186	4:-53814512	MsaT020527.1:CDS
GCAAAGGACCACATATCTGC+TGG	0.503873	4:+53814115	None:intergenic
ATGAAGGTACTGAACACTAT+AGG	0.505840	4:-53816588	MsaT020527.1:CDS
TGGAGATCCGACGAAGAACC+AGG	0.506120	4:-53814527	MsaT020527.1:CDS
GAGAAGGAAGGACAAGGAAA+AGG	0.507421	4:-53812158	MsaT020527.1:CDS
CTCAGTGCCTTACCCATCCA+TGG	0.510371	4:-53812261	MsaT020527.1:CDS
TCGGCCAGAATCGCAACTCA+TGG	0.510515	4:+53812395	None:intergenic
AGCATTCATTTGAAAAGAGA+AGG	0.511517	4:-53812174	MsaT020527.1:CDS
CAAAACAGTAAAATTGGGAA+TGG	0.514220	4:-53814547	MsaT020527.1:CDS
TATTTCCTGCAGATTGCACT+TGG	0.517054	4:-53812469	MsaT020527.1:intron
TTGTGGAGTTCCTCTCTCCA+TGG	0.521145	4:-53814767	MsaT020527.1:CDS
CAAAATCAAGTATTGGAAGA+AGG	0.523920	4:+53812308	None:intergenic
AAAGGCCGAGCAGGAGTTGG+TGG	0.524206	4:-53812140	MsaT020527.1:CDS
ATCAACACAGACCACTGAAA+AGG	0.529361	4:-53814332	MsaT020527.1:CDS
ACTGAAAAGGACCTTGCACC+AGG	0.530605	4:-53814319	MsaT020527.1:CDS
GGCTCAAGGCTGTGTTGAGA+AGG	0.533237	4:-53814473	MsaT020527.1:CDS
GAGCAGGAGTTGGTGGAAGT+TGG	0.533978	4:-53812133	MsaT020527.1:CDS
CACTTATCCATGGATGGGTA+AGG	0.534938	4:+53812254	None:intergenic
TGCTTGGGATACTCTCAAAT+CGG	0.534960	4:-53816464	MsaT020527.1:intron
GACCATCGTTTCCTGGTGCA+AGG	0.537763	4:+53814308	None:intergenic
GGAAAAGGCCGAGCAGGAGT+TGG	0.538465	4:-53812143	MsaT020527.1:CDS
GACCTGCACTTATCCATGGA+TGG	0.540258	4:+53812248	None:intergenic
TGATTGTAAAGAACCTGAGC+AGG	0.542237	4:-53814428	MsaT020527.1:CDS
ACCCATCCATGGATAAGTGC+AGG	0.542820	4:-53812250	MsaT020527.1:CDS
TTCACTGATTGATCCGTCAA+AGG	0.543734	4:-53814644	MsaT020527.1:CDS
ATACACACATGCACGCCATT+AGG	0.544060	4:+53814844	None:intergenic
AAAACATATCTCTTTAACCA+TGG	0.544485	4:+53814750	None:intergenic
ACACTACACTGAAGCTGCAA+TGG	0.544944	4:-53814959	MsaT020527.1:CDS
GAGAAGAAAATGAAGGGAAA+GGG	0.549231	4:-53814505	MsaT020527.1:CDS
CTTGGTGATGCTTTCAACAA+TGG	0.554279	4:-53816541	MsaT020527.1:CDS
AACCAGGAGAAGAAAATGAA+GGG	0.561030	4:-53814511	MsaT020527.1:CDS
TTCATTTGAAAAGAGAAGGA+AGG	0.562994	4:-53812170	MsaT020527.1:CDS
GCAGCTTCTTTCTCATGGAA+CGG	0.565762	4:+53814272	None:intergenic
CGAGGACCTGCACTTATCCA+TGG	0.565971	4:+53812244	None:intergenic
GGAGAAGAAAATGAAGGGAA+AGG	0.568087	4:-53814506	MsaT020527.1:CDS
TTAGAACCAAGAAGAACCTC+AGG	0.569982	4:+53814148	None:intergenic
GGGTACCATGCTGTGAAACT+TGG	0.570597	4:-53816559	MsaT020527.1:CDS
TTCCATGAGAAAGAAGCTGC+TGG	0.571340	4:-53814269	MsaT020527.1:CDS
ACCTGCACTTATCCATGGAT+GGG	0.571534	4:+53812249	None:intergenic
ACTCAACTCCAGCAGATATG+TGG	0.578886	4:-53814123	MsaT020527.1:CDS
TGTTGATCTTAAGTGCAAGC+TGG	0.579496	4:-53814242	MsaT020527.1:CDS
AAGGGTAAGAGGGTGGCTCA+AGG	0.581871	4:-53814487	MsaT020527.1:CDS
ATCAAATATAGTGACTATTG+TGG	0.585632	4:-53814784	MsaT020527.1:CDS
AGTGAGGGCTCAAGAGTTCG+AGG	0.586270	4:+53812226	None:intergenic
ATTCTCAAACAAATTGAAGA+GGG	0.586563	4:-53814925	MsaT020527.1:CDS
TCAATAGACATGGTGACTTG+AGG	0.591641	4:-53812423	MsaT020527.1:CDS
CTGAACACTATAGGCGTGGT+GGG	0.591727	4:-53816579	MsaT020527.1:CDS
CAGTGGTGACAACTATGATA+GGG	0.596335	4:-53814044	MsaT020527.1:CDS
CTCAAAGCAGATGCAAGCAA+AGG	0.596681	4:+53814099	None:intergenic
GATTCTCAAACAAATTGAAG+AGG	0.602574	4:-53814926	MsaT020527.1:CDS
GATTACAGTTCAGAAGATGA+AGG	0.613227	4:-53816604	MsaT020527.1:CDS
TTGATCCGTCAAAGGATCCA+AGG	0.613694	4:-53814636	MsaT020527.1:CDS
GTAAGGCACTGAGCAGCTGT+TGG	0.614457	4:+53812271	None:intergenic
AACTTCCACCAACTCCTGCT+CGG	0.617085	4:+53812135	None:intergenic
TCTTGGAAAGATGCCTAGCA+AGG	0.623101	4:-53812729	MsaT020527.1:intron
GACCTTGCACCAGGAAACGA+TGG	0.630623	4:-53814310	MsaT020527.1:CDS
ATGTTGATGACTTTACGGGT+CGG	0.635713	4:+53812062	None:intergenic
TGACAACTATGATAGGGATG+AGG	0.636106	4:-53814038	MsaT020527.1:intron
ATCTCTTTAACCATGGAGAG+AGG	0.638691	4:+53814757	None:intergenic
TGAAAAGAGAAGGAAGGACA+AGG	0.644229	4:-53812164	MsaT020527.1:CDS
GAAGGGAAAGGGTAAGAGGG+TGG	0.647195	4:-53814494	MsaT020527.1:CDS
CATCACCAAGTTTCACAGCA+TGG	0.653174	4:+53816554	None:intergenic
ACTGAACACTATAGGCGTGG+TGG	0.658178	4:-53816580	MsaT020527.1:CDS
AGGTTGTGTACTAGTCAGTG+AGG	0.667251	4:+53812210	None:intergenic
GGTTGTGTACTAGTCAGTGA+GGG	0.667334	4:+53812211	None:intergenic
GGAAAGTCCAGAGGAATCTG+GGG	0.668122	4:-53814452	MsaT020527.1:CDS
GGGTGAGAAGATTATCACCA+AGG	0.668408	4:+53814809	None:intergenic
GATAATGTCATTATTAGACA+CGG	0.679067	4:+53814570	None:intergenic
GGTACTGAACACTATAGGCG+TGG	0.685157	4:-53816583	MsaT020527.1:CDS
TCACAAATGATATTCAAACA+AGG	0.699139	4:-53814183	MsaT020527.1:CDS
TGAACAAGATGCAAATGACA+TGG	0.700027	4:-53812338	MsaT020527.1:CDS
AGTTGGTGGAAGTTGGTGTG+AGG	0.701503	4:-53812126	MsaT020527.1:CDS
TGTTGAGAAGGAAAGTCCAG+AGG	0.713136	4:-53814461	MsaT020527.1:CDS
TCATAGTTGTCACCACTGTG+AGG	0.714384	4:+53814049	None:intergenic
AAGGCAATATAGGTGTCCTG+AGG	0.731682	4:-53814164	MsaT020527.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	53812060	53816650	53812060	ID=MsaG020527
Chr4	mRNA	53812060	53816650	53812060	ID=MsaT020527.1;Parent=MsaG020527
Chr4	exon	53812060	53812479	53812060	ID=MsaT020527.1.exon4;Parent=MsaT020527.1
Chr4	CDS	53812060	53812479	53812060	ID=cds.MsaT020527.1;Parent=MsaT020527.1
Chr4	exon	53812730	53812777	53812730	ID=MsaT020527.1.exon3;Parent=MsaT020527.1
Chr4	CDS	53812730	53812777	53812730	ID=cds.MsaT020527.1;Parent=MsaT020527.1
Chr4	exon	53814039	53815016	53814039	ID=MsaT020527.1.exon2;Parent=MsaT020527.1
Chr4	CDS	53814039	53815016	53814039	ID=cds.MsaT020527.1;Parent=MsaT020527.1
Chr4	exon	53816465	53816650	53816465	ID=MsaT020527.1.exon1;Parent=MsaT020527.1
Chr4	CDS	53816465	53816650	53816465	ID=cds.MsaT020527.1;Parent=MsaT020527.1

Gene Sequence

>MsaT020527.1

ATGGAGAGAAAAGGAATCAACAATGATTACAGTTCAGAAGATGAAGGTACTGAACACTATAGGCGTGGTGGGTACCATGCTGTGAAACTTGGTGATGCTTTCAACAATGGCTGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCTACTGTTTGGCTTGCTTGGGATACTCTCAAATCGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAAAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATTGTGGAGTTCCTCTCTCCATGGTTAAAGAGATATGTTTTCATGTTCTAGTGGGCTTGGATTACTTGCATCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAAAATAAGTCCGTGTCTAATAATGACATTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACGAAGAACCAGGAGAAGAAAATGAAGGGAAAGGGTAAGAGGGTGGCTCAAGGCTGTGTTGAGAAGGAAAGTCCAGAGGAATCTGGGGATGATTGTAAAGAACCTGAGCAGGATAATTGTAACAATGTGAAATCCAGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGTTGAATCAACACAGACCACTGAAAAGGACCTTGCACCAGGAAACGATGGTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCATGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAGTTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAATATATCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG

Protein sequence

>MsaT020527.1

MERKGINNDYSSEDEGTEHYRRGGYHAVKLGDAFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYCGVPLSMVKEICFHVLVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNKSVSNNDIIQNSKIGNGDPTKNQEKKMKGKGKRVAQGCVEKESPEESGDDCKEPEQDNCNNVKSSVESVENKPNSSSSKVESTQTTEKDLAPGNDGHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIHELRFWPKKKILMEKYSFSEQDANDMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNISINGSPMSLKNSRPVKSST*