AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG020959

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020959 MtrunA17_Chr4g0033521 94.242 1181 27 7 1 1165 76 1231 0.0 2259
MsaG020959 MtrunA17_Chr1g0177811 25.373 469 280 22 707 1150 439 862 2.92e-19 94.0
MsaG020959 MtrunA17_Chr8g0386981 23.889 360 174 11 353 686 414 699 7.06e-19 92.8
MsaG020959 MtrunA17_Chr1g0173921 24.299 321 153 9 344 641 1 254 1.72e-17 88.6
MsaG020959 MtrunA17_Chr4g0051261 24.904 261 127 7 344 599 1 197 2.28e-16 81.3
MsaG020959 MtrunA17_Chr5g0397261 25.843 267 133 7 335 599 32 235 3.91e-16 82.0
MsaG020959 MtrunA17_Chr5g0424501 25.938 320 142 12 353 647 198 447 4.25e-16 82.8
MsaG020959 MtrunA17_Chr4g0018201 28.261 276 127 9 344 599 756 980 6.23e-16 83.6
MsaG020959 MtrunA17_Chr8g0345801 25.231 325 160 13 341 651 9 264 9.52e-16 79.0
MsaG020959 MtrunA17_Chr5g0428981 27.899 276 128 9 344 599 760 984 9.61e-16 82.8
MsaG020959 MtrunA17_Chr8g0384301 22.523 333 164 9 338 644 290 554 1.50e-15 81.6
MsaG020959 MtrunA17_Chr5g0424581 25.625 320 143 12 353 647 131 380 2.03e-15 79.7
MsaG020959 MtrunA17_Chr5g0424651 25.625 320 143 12 353 647 327 576 2.06e-15 81.3
MsaG020959 MtrunA17_Chr3g0107011 23.511 319 156 11 347 652 14 257 2.21e-15 80.5
MsaG020959 MtrunA17_Chr8g0387401 26.217 267 132 7 335 599 43 246 3.42e-15 79.0
MsaG020959 MtrunA17_Chr2g0293491 24.046 262 128 7 344 599 1 197 4.72e-15 77.4
MsaG020959 MtrunA17_Chr8g0385971 24.555 281 147 6 323 599 65 284 7.47e-15 79.3
MsaG020959 MtrunA17_Chr4g0030231 24.324 259 134 3 343 599 36 234 7.95e-15 77.8
MsaG020959 MtrunA17_Chr4g0045841 26.165 279 131 7 336 599 31 249 1.87e-14 76.6
MsaG020959 MtrunA17_Chr2g0284011 25.095 263 132 6 344 603 9 209 2.08e-14 77.0
MsaG020959 MtrunA17_Chr5g0441011 25.153 326 164 11 342 655 8 265 2.93e-14 76.6
MsaG020959 MtrunA17_Chr2g0315061 29.562 274 118 13 345 609 35 242 3.12e-14 76.3
MsaG020959 MtrunA17_Chr4g0030151 26.950 282 136 8 327 599 13 233 4.14e-14 75.5
MsaG020959 MtrunA17_Chr2g0315081 27.575 301 145 11 345 640 652 884 4.41e-14 77.4
MsaG020959 MtrunA17_Chr7g0245031 26.897 290 133 11 344 623 145 365 5.36e-14 76.3
MsaG020959 MtrunA17_Chr5g0394681 28.743 167 96 6 439 600 153 301 6.45e-14 75.1
MsaG020959 MtrunA17_Chr8g0348481 25.725 276 130 8 339 599 16 231 8.14e-14 74.7
MsaG020959 MtrunA17_Chr2g0317001 24.702 336 169 10 347 662 15 286 8.41e-14 76.3
MsaG020959 MtrunA17_Chr6g0474901 26.102 295 128 11 345 629 565 779 1.11e-13 75.9
MsaG020959 MtrunA17_Chr5g0432491 23.100 329 165 10 344 658 20 274 1.15e-13 74.7
MsaG020959 MtrunA17_Chr3g0114511 24.060 266 132 7 344 603 29 230 1.25e-13 74.7
MsaG020959 MtrunA17_Chr2g0314991 27.758 281 138 9 333 609 1163 1382 1.27e-13 76.3
MsaG020959 MtrunA17_Chr5g0402551 25.566 309 147 11 353 645 140 381 1.52e-13 75.1
MsaG020959 MtrunA17_Chr1g0190131 28.834 163 94 5 465 623 82 226 2.07e-13 72.0
MsaG020959 MtrunA17_Chr4g0000431 28.866 194 104 5 487 660 119 298 2.25e-13 74.7
MsaG020959 MtrunA17_Chr1g0150321 30.682 176 99 7 464 633 84 242 4.35e-13 72.8
MsaG020959 MtrunA17_Chr3g0115171 25.210 238 104 6 369 599 304 474 4.40e-13 73.6
MsaG020959 MtrunA17_Chr1g0202101 32.099 162 67 6 499 639 388 527 5.16e-13 73.2
MsaG020959 MtrunA17_Chr7g0244521 23.765 324 161 13 341 652 6 255 5.52e-13 72.8
MsaG020959 MtrunA17_Chr1g0206231 25.940 266 118 10 345 599 345 542 7.31e-13 73.2
MsaG020959 MtrunA17_Chr7g0248461 23.970 267 138 7 335 599 29 232 7.67e-13 71.6
MsaG020959 MtrunA17_Chr3g0127571 25.246 305 142 11 347 632 138 375 1.29e-12 72.0
MsaG020959 MtrunA17_Chr4g0065851 25.220 341 171 10 341 675 23 285 1.50e-12 71.6
MsaG020959 MtrunA17_Chr1g0209381 26.761 284 135 11 345 619 326 545 1.54e-12 72.0
MsaG020959 MtrunA17_Chr1g0166101 38.938 113 55 2 487 599 120 218 1.54e-12 71.2
MsaG020959 MtrunA17_Chr5g0432471 23.920 301 151 11 337 626 1 234 1.66e-12 71.2
MsaG020959 MtrunA17_Chr4g0001331 27.607 163 96 4 487 646 114 257 2.24e-12 70.9
MsaG020959 MtrunA17_Chr5g0424531 23.667 300 137 10 369 644 37 268 2.28e-12 69.3
MsaG020959 MtrunA17_Chr6g0450571 28.090 178 96 4 487 644 111 276 2.36e-12 71.2
MsaG020959 MtrunA17_Chr1g0206331 25.856 263 122 10 345 599 334 531 2.40e-12 71.2
MsaG020959 MtrunA17_Chr3g0136131 37.838 111 48 5 498 603 201 295 2.54e-12 70.1
MsaG020959 MtrunA17_Chr4g0059181 32.759 116 58 4 489 600 204 303 4.63e-12 69.3
MsaG020959 MtrunA17_Chr8g0370241 31.282 195 99 10 469 644 532 710 4.64e-12 70.5
MsaG020959 MtrunA17_Chr6g0450871 28.472 144 82 5 461 600 160 286 4.98e-12 69.3
MsaG020959 MtrunA17_Chr2g0324461 23.664 262 136 5 342 600 136 336 5.52e-12 70.1
MsaG020959 MtrunA17_Chr5g0415451 26.357 258 140 9 345 599 425 635 6.15e-12 70.1
MsaG020959 MtrunA17_Chr2g0317501 24.335 263 133 6 342 600 129 329 6.47e-12 70.1
MsaG020959 MtrunA17_Chr6g0453711 23.552 259 130 7 347 600 110 305 7.78e-12 69.7
MsaG020959 MtrunA17_Chr6g0483771 27.155 232 107 7 369 599 12 182 8.35e-12 67.4
MsaG020959 MtrunA17_Chr3g0117811 30.657 137 74 5 468 600 155 274 8.51e-12 68.6
MsaG020959 MtrunA17_Chr7g0256001 23.100 329 170 10 330 642 124 385 8.68e-12 69.3
MsaG020959 MtrunA17_Chr7g0218071 26.255 259 123 9 347 600 120 315 8.91e-12 69.7
MsaG020959 MtrunA17_Chr4g0059751 30.769 130 70 3 498 624 202 314 1.17e-11 68.6
MsaG020959 MtrunA17_Chr8g0374701 29.101 189 107 6 466 645 205 375 1.45e-11 68.6
MsaG020959 MtrunA17_Chr5g0396361 23.372 261 136 4 342 599 135 334 1.53e-11 68.6
MsaG020959 MtrunA17_Chr5g0442151 35.252 139 69 5 498 630 787 910 1.94e-11 68.6
MsaG020959 MtrunA17_Chr7g0276111 28.402 169 95 5 462 622 217 367 2.38e-11 68.2
MsaG020959 MtrunA17_Chr5g0407261 28.458 253 142 12 451 684 571 803 2.61e-11 68.2
MsaG020959 MtrunA17_Chr2g0333821 27.673 159 93 4 487 642 108 247 2.81e-11 67.4
MsaG020959 MtrunA17_Chr4g0018801 32.692 104 50 3 499 599 602 688 3.11e-11 67.8
MsaG020959 MtrunA17_Chr3g0122781 25.379 264 132 6 339 599 408 609 4.22e-11 67.4
MsaG020959 MtrunA17_Chr1g0209361 37.168 113 52 4 491 599 439 536 4.71e-11 67.4
MsaG020959 MtrunA17_Chr1g0157231 31.373 102 53 3 498 599 249 333 5.70e-11 65.9
MsaG020959 MtrunA17_Chr8g0354651 40.404 99 43 3 501 599 218 300 5.79e-11 65.9
MsaG020959 MtrunA17_Chr3g0129721 30.345 145 77 5 466 603 97 224 6.75e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020959 AT3G59410.2 62.135 1199 388 14 1 1164 97 1264 0.0 1439
MsaG020959 AT3G59410.1 62.135 1199 388 14 1 1164 73 1240 0.0 1439
MsaG020959 AT3G59410.3 62.135 1199 388 14 1 1164 73 1240 0.0 1439
MsaG020959 AT3G59410.4 62.500 1200 383 16 1 1164 73 1241 0.0 1439
MsaG020959 AT3G59410.5 61.711 1157 384 13 1 1129 73 1198 0.0 1387
MsaG020959 AT1G54510.4 25.298 336 162 10 344 658 1 268 9.34e-20 95.5
MsaG020959 AT1G54510.2 25.298 336 162 10 344 658 1 268 9.34e-20 95.5
MsaG020959 AT1G54510.1 25.298 336 162 10 344 658 1 268 9.34e-20 95.5
MsaG020959 AT1G54510.3 25.298 336 162 10 344 658 1 268 9.34e-20 95.5
MsaG020959 AT3G48750.1 25.856 263 122 8 344 599 1 197 2.97e-18 87.4
MsaG020959 AT1G20930.1 25.182 274 138 7 334 599 3 217 6.87e-17 83.6
MsaG020959 AT5G18700.1 25.581 258 125 6 344 600 1 192 7.96e-17 87.0
MsaG020959 AT1G49180.2 32.967 182 97 7 465 639 78 241 1.41e-16 83.6
MsaG020959 AT1G49180.1 32.967 182 97 7 465 639 78 241 1.82e-16 83.6
MsaG020959 AT3G02760.2 25.316 316 200 13 707 1007 454 748 2.78e-16 84.7
MsaG020959 AT3G02760.1 25.316 316 200 13 707 1007 454 748 2.78e-16 84.7
MsaG020959 AT4G11330.1 25.517 290 138 7 328 599 8 237 4.19e-16 82.0
MsaG020959 AT1G07880.1 24.719 267 136 4 335 599 24 227 1.28e-15 78.6
MsaG020959 AT1G07880.2 24.719 267 136 4 335 599 24 227 2.13e-15 79.7
MsaG020959 AT2G46070.2 26.190 252 124 6 350 599 44 235 3.07e-15 79.0
MsaG020959 AT1G53420.1 26.367 311 154 10 345 651 622 861 4.37e-15 80.9
MsaG020959 AT2G46070.3 26.190 252 124 6 350 599 78 269 5.41e-15 79.0
MsaG020959 AT2G46070.1 26.190 252 124 6 350 599 44 235 6.74e-15 78.6
MsaG020959 AT2G43790.1 25.597 293 139 8 326 599 25 257 1.88e-14 77.4
MsaG020959 AT5G21326.1 25.275 273 127 9 342 603 8 214 2.21e-14 77.4
MsaG020959 AT1G29230.1 25.573 262 124 8 344 599 71 267 3.24e-14 77.4
MsaG020959 AT5G35410.2 24.723 271 129 8 342 603 6 210 3.26e-14 76.3
MsaG020959 AT4G14780.1 25.243 309 158 14 306 600 26 275 3.89e-14 75.9
MsaG020959 AT5G45820.1 25.228 329 164 13 344 663 9 264 4.61e-14 76.6
MsaG020959 AT5G35410.1 24.723 271 129 8 342 603 6 210 5.41e-14 76.3
MsaG020959 AT3G22750.1 24.308 325 174 13 290 600 23 289 8.07e-14 75.1
MsaG020959 AT1G53570.2 22.925 253 124 5 353 599 220 407 1.67e-13 75.5
MsaG020959 AT1G53570.3 22.925 253 124 5 353 599 220 407 1.67e-13 75.5
MsaG020959 AT1G53570.1 22.925 253 124 5 353 599 220 407 1.72e-13 75.5
MsaG020959 AT1G53570.4 22.925 253 124 5 353 599 220 407 1.76e-13 75.5
MsaG020959 AT1G08650.2 34.351 131 65 5 497 623 122 235 1.78e-13 72.8
MsaG020959 AT1G53570.6 22.925 253 124 5 353 599 220 407 2.00e-13 75.1
MsaG020959 AT1G53570.7 22.925 253 124 5 353 599 220 407 2.02e-13 75.1
MsaG020959 AT5G58380.1 23.913 368 179 13 351 702 16 298 2.06e-13 74.7
MsaG020959 AT1G08650.1 34.351 131 65 5 497 623 122 235 2.14e-13 72.8
MsaG020959 AT3G01490.1 28.916 166 93 6 439 600 178 322 2.16e-13 74.3
MsaG020959 AT1G01140.3 24.299 321 169 9 344 655 16 271 2.31e-13 74.3
MsaG020959 AT1G01140.1 24.299 321 169 9 344 655 16 271 2.92e-13 73.9
MsaG020959 AT3G05050.3 23.711 291 155 7 314 599 104 332 2.93e-13 74.7
MsaG020959 AT3G05050.2 23.711 291 155 7 314 599 104 332 2.93e-13 74.7
MsaG020959 AT3G05050.1 23.711 291 155 7 314 599 104 332 2.93e-13 74.7
MsaG020959 AT5G39420.1 25.000 256 128 9 347 599 105 299 3.13e-13 74.7
MsaG020959 AT3G59790.1 25.939 293 140 10 322 599 24 254 3.17e-13 73.6
MsaG020959 AT3G01490.2 28.916 166 93 6 439 600 178 322 3.41e-13 73.2
MsaG020959 AT1G01140.2 24.000 325 167 10 344 655 16 273 3.80e-13 73.6
MsaG020959 AT3G45640.1 26.800 250 121 6 352 599 43 232 5.27e-13 72.8
MsaG020959 AT2G42640.1 30.233 172 80 9 489 640 619 770 7.58e-13 73.6
MsaG020959 AT2G42640.4 30.233 172 80 9 489 640 581 732 7.85e-13 73.6
MsaG020959 AT3G15220.1 31.429 140 80 3 461 599 81 205 8.59e-13 73.2
MsaG020959 AT2G25090.1 26.904 197 116 5 466 652 89 267 8.69e-13 72.8
MsaG020959 AT1G79640.2 28.431 204 107 6 466 644 84 273 1.35e-12 72.8
MsaG020959 AT1G79640.4 28.431 204 107 6 466 644 84 273 1.35e-12 72.8
MsaG020959 AT1G79640.3 28.431 204 107 6 466 644 84 273 1.35e-12 72.8
MsaG020959 AT1G79640.6 28.431 204 107 6 466 644 84 273 1.35e-12 72.8
MsaG020959 AT1G79640.1 28.431 204 107 6 466 644 84 273 1.37e-12 72.8
MsaG020959 AT1G79640.5 28.431 204 107 6 466 644 87 276 1.39e-12 72.8
MsaG020959 AT5G50000.2 29.012 162 89 5 449 600 151 296 2.33e-12 70.1
MsaG020959 AT4G10730.1 27.830 212 113 8 465 648 117 316 2.50e-12 72.0
MsaG020959 AT5G50000.1 29.012 162 89 5 449 600 151 296 2.54e-12 70.5
MsaG020959 AT4G10730.2 27.830 212 113 8 465 648 97 296 2.85e-12 71.6
MsaG020959 AT2G48010.1 29.213 178 98 6 484 654 374 530 3.11e-12 71.2
MsaG020959 AT5G38210.2 26.877 253 118 8 351 599 374 563 4.04e-12 71.2
MsaG020959 AT5G38210.1 26.877 253 118 8 351 599 362 551 4.58e-12 70.9
MsaG020959 AT5G38210.3 26.877 253 118 8 351 599 356 545 4.91e-12 70.9
MsaG020959 AT1G33770.1 36.792 106 53 2 495 600 245 336 6.47e-12 70.5
MsaG020959 AT1G53165.3 30.714 140 81 3 461 599 81 205 1.16e-11 69.7
MsaG020959 AT2G38490.1 34.127 126 59 6 485 603 120 228 1.18e-11 68.9
MsaG020959 AT5G10930.1 32.075 159 81 7 483 633 103 242 1.20e-11 68.9
MsaG020959 AT1G53165.2 30.714 140 81 3 461 599 81 205 1.24e-11 69.7
MsaG020959 AT1G53165.1 30.714 140 81 3 461 599 81 205 1.30e-11 69.3
MsaG020959 AT5G01810.1 30.178 169 92 7 483 646 102 249 5.14e-11 66.6
MsaG020959 AT5G01810.2 30.178 169 92 7 483 646 102 249 5.14e-11 66.6
MsaG020959 AT5G01810.3 30.178 169 92 7 483 646 102 249 7.25e-11 65.9

Find 270 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACAGAGCTGTACAATTT+AGG 0.134939 4:+61218528 MsaT020959.1:CDS
CATCGAGAATATCTCAATTT+TGG 0.149788 4:+61218834 MsaT020959.1:CDS
AATATCACCAATGCGATTAT+TGG 0.200267 4:+61225065 MsaT020959.1:CDS
TTGCCAGCCTCTTGAGAATT+TGG 0.215972 4:+61228550 MsaT020959.1:CDS
GTGCCAAACCTTCTACTATT+TGG 0.235886 4:-61222769 None:intergenic
CCTCAGAAAGGAAATCAAAA+TGG 0.255567 4:+61228125 MsaT020959.1:CDS
CAACAGAGCTGTACAATTTA+GGG 0.267102 4:+61218529 MsaT020959.1:CDS
TTCTGACTCGGCACGTGATA+TGG 0.282507 4:+61218661 MsaT020959.1:CDS
TTCTCCGACAGTATCTAATT+TGG 0.283657 4:-61217289 None:intergenic
ATTAAATTCACCTTAATATT+CGG 0.285573 4:-61219343 None:intergenic
CTATGGAGAGTCCTGGAATT+GGG 0.290457 4:+61217128 MsaT020959.1:CDS
TTGAGCTTTGGCATCCATTT+GGG 0.294228 4:+61223604 MsaT020959.1:CDS
TAAATAGGTCATGGTGGTTT+TGG 0.296967 4:+61219236 MsaT020959.1:intron
TGCGTTTGCCTTTCGTGAAC+TGG 0.301884 4:+61225263 MsaT020959.1:CDS
GAGTCCTGGAATTGGGGTTT+TGG 0.314175 4:+61217135 MsaT020959.1:CDS
ATCGCATTGGTGATATTTCT+AGG 0.316804 4:-61225059 None:intergenic
GATTCAGTTGGTTTGGCAAT+AGG 0.318107 4:-61216723 None:intergenic
TAGCTGAAGCTATGGTAAAT+AGG 0.318377 4:+61228326 MsaT020959.1:CDS
GCTCGCAATGATATTAAAAT+TGG 0.318740 4:+61222851 MsaT020959.1:CDS
TGGAACTAGTTGCTGAATTA+TGG 0.318945 4:+61230703 MsaT020959.1:CDS
ATGATTGTCCACAGTTTAAC+AGG 0.320066 4:+61225088 MsaT020959.1:CDS
GCAAGCTCCAATGATGCTAT+TGG 0.323573 4:+61221365 MsaT020959.1:CDS
ATTCGTCAGGTTGGTAGATT+GGG 0.326823 4:+61224925 MsaT020959.1:CDS
TGGACACCTTCTTCTGATCT+TGG 0.327775 4:+61218854 MsaT020959.1:CDS
CCGAGCTTCTATTCGTGGTT+TGG 0.329304 4:-61217214 None:intergenic
TTTGAGCTTTGGCATCCATT+TGG 0.330708 4:+61223603 MsaT020959.1:CDS
ACATGTTGTTCGGTATTATC+AGG 0.331570 4:+61221004 MsaT020959.1:CDS
GCATGCCTGACCGAATATTA+AGG 0.342152 4:+61219333 MsaT020959.1:CDS
TCCCTCCCTAGCATTTAAAT+TGG 0.342928 4:-61216643 None:intergenic
CGCCTTGTTTGTGCCTCTAA+AGG 0.347600 4:+61218477 MsaT020959.1:CDS
CATTCGTCAGGTTGGTAGAT+TGG 0.352035 4:+61224924 MsaT020959.1:CDS
TGGTAGAGCACCCCTTAGTC+TGG 0.362909 4:-61228398 None:intergenic
GAATGTCACACAAGTCTTCA+TGG 0.364469 4:-61227908 None:intergenic
CTCAAGCCCAATAGCATCAT+TGG 0.369085 4:-61221372 None:intergenic
TTTGTCTCTCCTCCTTGATC+AGG 0.372085 4:+61216483 MsaT020959.1:CDS
ACATTTGATATCATGTTCAT+TGG 0.374527 4:-61230874 None:intergenic
TTCCAGGCATGGTTTGAAAC+TGG 0.374951 4:+61221242 MsaT020959.1:intron
CTGACCTCCTGGGTGCAATT+TGG 0.375293 4:+61227943 MsaT020959.1:CDS
TGAACTGTGTCCCAAGGATA+TGG 0.375586 4:+61217050 MsaT020959.1:CDS
TTGTTTCGCCAAATAGTAGA+AGG 0.376729 4:+61222761 MsaT020959.1:CDS
GATATTAAAATTGGTGACTT+TGG 0.378504 4:+61222860 MsaT020959.1:CDS
TTTGAAGCTTCTTTCAATGA+TGG 0.378524 4:+61228084 MsaT020959.1:intron
TTAAGGAAGGAGAACAGTTC+TGG 0.379763 4:+61229781 MsaT020959.1:CDS
TCTCACAGATTCAGTTGGTT+TGG 0.380229 4:-61216730 None:intergenic
AAGCGAAGTTTCCACCTTCA+TGG 0.382307 4:+61223670 MsaT020959.1:CDS
TTCAGCCAAGTTCTTGAAGT+TGG 0.382689 4:+61223327 MsaT020959.1:intron
TCTCTATGATAACTTTCGTT+TGG 0.383063 4:-61228612 None:intergenic
CTCGTTATTATTACAGATGC+AGG 0.387637 4:+61230897 MsaT020959.1:CDS
TTTCTATTGTTTGAGATGCT+TGG 0.388882 4:-61218342 None:intergenic
CAATTCATCAAGTGCCTTGA+AGG 0.392265 4:-61228520 None:intergenic
CTCTAATGACATGGGTTATG+AGG 0.398183 4:+61215916 None:intergenic
TCTAAACCATGCTGACCTCC+TGG 0.398669 4:+61227932 MsaT020959.1:CDS
GATTCTTATGGTGATCCTGC+TGG 0.401488 4:+61221272 MsaT020959.1:CDS
TGCAGATAAGCGTACCTTCA+AGG 0.404079 4:+61228506 MsaT020959.1:intron
ACTGGAGTTGCAGATTCTTA+TGG 0.404938 4:+61221260 MsaT020959.1:CDS
TACAGATGCAGGTTTAGTTA+AGG 0.408581 4:+61230908 MsaT020959.1:CDS
AATGAAGAAAATTCGCCTTA+AGG 0.409579 4:+61219304 MsaT020959.1:CDS
TTTCCGCTCTTCTTGTTGTC+AGG 0.412156 4:+61215948 MsaT020959.1:CDS
GCTATGGAGAGTCCTGGAAT+TGG 0.412214 4:+61217127 MsaT020959.1:CDS
TTTGAAGATGCCATATCCTT+GGG 0.413569 4:-61217060 None:intergenic
CCAGCCTCTTGAGAATTTGG+AGG 0.413632 4:+61228553 MsaT020959.1:CDS
ATTTGAAGATGCCATATCCT+TGG 0.414251 4:-61217061 None:intergenic
AATAGAAAAGGATCTAATAA+TGG 0.415727 4:+61218357 MsaT020959.1:CDS
ACAACTGGAGTTTCCATTGA+TGG 0.419034 4:+61223385 MsaT020959.1:CDS
TACAACATCAACATGTTGTT+CGG 0.419219 4:+61220994 MsaT020959.1:CDS
TCGCCAAATAGTAGAAGGTT+TGG 0.420863 4:+61222766 MsaT020959.1:CDS
TTTGGAGGCATCTAACTTAG+AGG 0.420919 4:-61217196 None:intergenic
TAGATCTCTGGTGGATGGTT+TGG 0.421642 4:+61217356 MsaT020959.1:CDS
GTTCTTGAAGTTGGAGCAGC+TGG 0.424118 4:+61223336 MsaT020959.1:CDS
TTTCTTGGAAGATATACTTA+AGG 0.425383 4:+61229764 MsaT020959.1:intron
CTATGATAACTTTCGTTTGG+CGG 0.426966 4:-61228609 None:intergenic
TTGAAGCTTCTTTCAATGAT+GGG 0.426995 4:+61228085 MsaT020959.1:intron
AATTCCAAAACCCCAATTCC+AGG 0.427210 4:-61217139 None:intergenic
CAAGCTCCAATGATGCTATT+GGG 0.428086 4:+61221366 MsaT020959.1:CDS
GTCAGCCAAGGTACCTTTAG+AGG 0.429848 4:-61218490 None:intergenic
GTCAGGCACTTCCCAGACTA+AGG 0.432810 4:+61228386 MsaT020959.1:CDS
GAAGTTCTTGCAATATGAAC+GGG 0.434216 4:-61217263 None:intergenic
CATTCATCTTTCTTGTCATT+AGG 0.434461 4:+61230801 MsaT020959.1:CDS
CTGCTCCAACTTCAAGAACT+TGG 0.437353 4:-61223332 None:intergenic
AACTCATTCAAGTAGATCTC+TGG 0.442100 4:+61217344 MsaT020959.1:CDS
ACACCTTCTTCTGATCTTGG+AGG 0.446526 4:+61218857 MsaT020959.1:CDS
ATTCACCTTAATATTCGGTC+AGG 0.446642 4:-61219338 None:intergenic
CTGATTTCTGCATTGTTCGC+AGG 0.448193 4:-61224834 None:intergenic
ATTCTGTGGATCTGCAGGTC+AGG 0.448993 4:+61228369 MsaT020959.1:CDS
AACATATCTTTATATACAAA+TGG 0.451751 4:+61221409 MsaT020959.1:CDS
AAAATTGGTGACTTTGGTCT+CGG 0.452656 4:+61222866 MsaT020959.1:CDS
ATGGCCTAAGATTGATGAAA+AGG 0.454759 4:+61223459 MsaT020959.1:CDS
TCTCTGGTGGATGGTTTGGT+AGG 0.456688 4:+61217360 MsaT020959.1:CDS
TACAGCTCTGTTGCTAATTG+AGG 0.456911 4:-61218519 None:intergenic
AGCTTCTATTCGTGGTTTGG+AGG 0.457162 4:-61217211 None:intergenic
GAATGTTGCTTAAATCCATA+TGG 0.459330 4:-61231836 None:intergenic
GACAGAGGCCGAGGTCATAA+AGG 0.460498 4:+61227503 MsaT020959.1:CDS
CTCTGGTGGATGGTTTGGTA+GGG 0.460802 4:+61217361 MsaT020959.1:CDS
TCCAGGCCAATTTAAATGCT+AGG 0.461777 4:+61216637 MsaT020959.1:intron
TCGGGAGTAATCTGCAACTT+GGG 0.462634 4:-61216427 None:intergenic
GATTATATGATTCAAACATC+TGG 0.463611 4:-61222712 None:intergenic
CTCGGGAGTAATCTGCAACT+TGG 0.466932 4:-61216428 None:intergenic
CTCAGAAAGGAAATCAAAAT+GGG 0.467097 4:+61228126 MsaT020959.1:CDS
GGCCATCCTTGCTCAATCTC+AGG 0.468999 4:-61223442 None:intergenic
GCCCATCCTGCTGATACAAC+TGG 0.470509 4:+61223370 MsaT020959.1:CDS
AACTTGTCCAGTGCCATCAA+TGG 0.472833 4:-61223398 None:intergenic
AATTCAGAAACCCCTCCATA+TGG 0.474449 4:+61231821 MsaT020959.1:CDS
TTGAGATTCTGTGGATCTGC+AGG 0.476057 4:+61228364 MsaT020959.1:CDS
AGCATCTCAAACAATAGAAA+AGG 0.478262 4:+61218345 MsaT020959.1:CDS
TTTGAGGAGCTACGCCCTCT+TGG 0.478498 4:+61218920 MsaT020959.1:CDS
GATTTCCTTTCTGAGGATTG+AGG 0.480269 4:-61228118 None:intergenic
ACGAATGGAGTCTGAATTGT+TGG 0.481606 4:+61223796 MsaT020959.1:CDS
AGCGAAGTTTCCACCTTCAT+GGG 0.484273 4:+61223671 MsaT020959.1:CDS
AATCAAAATGGGCAGTGATA+AGG 0.484328 4:+61228137 MsaT020959.1:CDS
GGAGTTCTTGATTCCCCAGC+AGG 0.484376 4:-61221287 None:intergenic
GCATGGCTCCACCATGGGTC+AGG 0.484479 4:-61225222 None:intergenic
TCCTGGGTGCAATTTGGTCA+TGG 0.486081 4:+61227949 MsaT020959.1:CDS
ATTCTTATGGTGATCCTGCT+GGG 0.487031 4:+61221273 MsaT020959.1:CDS
GATAAGGCGGCAGCTTCTGC+AGG 0.487438 4:+61228153 MsaT020959.1:CDS
TGCTCTGTGAGACTTGGATC+AGG 0.488980 4:-61230840 None:intergenic
CTCTCCATTGCAGTCCCAAA+TGG 0.491843 4:-61223618 None:intergenic
GAAGGTGTCTTGCTAGCTGT+TGG 0.492067 4:+61229814 MsaT020959.1:CDS
GTTGGTAGATTGGGGTCAGT+TGG 0.492505 4:+61224934 MsaT020959.1:CDS
GGCACCTGAAGGTAACGGTT+TGG 0.492529 4:-61227184 None:intergenic
CGAAAGGCAAACGCAGCTCA+TGG 0.495632 4:-61225255 None:intergenic
CCAGGCCAATTTAAATGCTA+GGG 0.496194 4:+61216638 MsaT020959.1:intron
TACAAAATCTGTGTGCTGAA+TGG 0.496393 4:-61224971 None:intergenic
CGATTATGCTTAAAATCTAC+AGG 0.496578 4:-61230409 None:intergenic
AGACAAAAGTTTATTAGCAT+CGG 0.500837 4:-61216467 None:intergenic
CAGGCTGACATGTACAGCTT+AGG 0.501324 4:+61223570 MsaT020959.1:intron
GAAGGTTTGGCACACATACA+TGG 0.508183 4:+61222779 MsaT020959.1:CDS
ATCACCAAACCGTTACCTTC+AGG 0.508618 4:+61227180 MsaT020959.1:CDS
GATAGTCCCCACACGGTTGG+AGG 0.508742 4:-61230356 None:intergenic
GGAGTTTCCATTGATGGCAC+TGG 0.509434 4:+61223391 MsaT020959.1:CDS
GTGTGCTCAAGAGGAGGAGG+TGG 0.510199 4:+61230663 MsaT020959.1:CDS
TATGGAGAGTCCTGGAATTG+GGG 0.514589 4:+61217129 MsaT020959.1:CDS
CTAAGGGGTGCTCTACCATC+TGG 0.515013 4:+61228403 MsaT020959.1:CDS
TACGTTTACAGAAGAGCAGT+TGG 0.515246 4:+61227151 MsaT020959.1:CDS
AAGCACAAAACACATTCGTC+AGG 0.517661 4:+61224912 MsaT020959.1:CDS
CCGACAGTATCTAATTTGGC+AGG 0.517669 4:-61217285 None:intergenic
ATTGATGGCACTGGACAAGT+TGG 0.517938 4:+61223400 MsaT020959.1:CDS
CCTCCAAATTCTCAAGAGGC+TGG 0.518958 4:-61228553 None:intergenic
ACTATTTGCTTCATCAGTTG+AGG 0.522819 4:+61229848 MsaT020959.1:CDS
GAATCATTGTCTCTTGTGAA+AGG 0.523278 4:-61230378 None:intergenic
ACTCTCCATAGCCACTGAAA+AGG 0.525018 4:-61217116 None:intergenic
CTCCTGAGATTGAGCAAGGA+TGG 0.525511 4:+61223440 MsaT020959.1:CDS
TTGGTCATGGACTGGAATCA+AGG 0.526769 4:+61227962 MsaT020959.1:CDS
TGCAAAAGTTCTGTTGCAGA+CGG 0.527373 4:-61223758 None:intergenic
GTGAGACTTGGATCAGGGAC+AGG 0.527513 4:-61230834 None:intergenic
AACAATTCAGACTCCATTCG+TGG 0.527843 4:-61223794 None:intergenic
TCCAGTTGTATCAGCAGGAT+GGG 0.528959 4:-61223371 None:intergenic
TTGCAGATTACTCCCGAGAT+GGG 0.529753 4:+61216433 MsaT020959.1:CDS
CAAGTTTCTATCGGATGCTA+TGG 0.529942 4:+61231792 MsaT020959.1:CDS
AAGAGGAGGAGGTGGTCTGT+TGG 0.530503 4:+61230671 MsaT020959.1:CDS
GCATCCATTTGGGACTGCAA+TGG 0.531216 4:+61223614 MsaT020959.1:CDS
ATTTCCTTTCTGTTGCAGAA+AGG 0.532710 4:-61230333 None:intergenic
TCATACTGCTCTGTGAGACT+TGG 0.534120 4:-61230846 None:intergenic
TGTTACTTGGTGTTAAGTCC+CGG 0.535287 4:-61222817 None:intergenic
CTTCGCTTTCTGTTTCAGAT+CGG 0.535427 4:-61223655 None:intergenic
AATATTCTTGTGTGCTCAAG+AGG 0.535857 4:+61230654 MsaT020959.1:CDS
TTGGAAGATATACTTAAGGA+AGG 0.539899 4:+61229768 MsaT020959.1:intron
AACAGGCAAGCACCTGATCA+AGG 0.539948 4:-61216495 None:intergenic
TTCAGCATTGACAGAGGCCG+AGG 0.540068 4:+61227494 MsaT020959.1:CDS
TTTCTTGAAGATATGATCAA+AGG 0.540567 4:-61218714 None:intergenic
TTGATGGCACTGGACAAGTT+GGG 0.541943 4:+61223401 MsaT020959.1:CDS
TTGTGCCTCTAAAGGTACCT+TGG 0.542041 4:+61218485 MsaT020959.1:CDS
AGGAGGAGGTGGTCTGTTGG+TGG 0.543353 4:+61230674 MsaT020959.1:CDS
CTGTCCTTTCTGCAACAGAA+AGG 0.544203 4:+61230329 MsaT020959.1:CDS
CAATCATCCAATAATCGCAT+TGG 0.544999 4:-61225072 None:intergenic
GGTGTCTTGCTAGCTGTTGG+TGG 0.547435 4:+61229817 MsaT020959.1:CDS
GTTGCAGATTACTCCCGAGA+TGG 0.547558 4:+61216432 MsaT020959.1:CDS
TTCAAGCATGGCTCCACCAT+GGG 0.547786 4:-61225227 None:intergenic
ACGTTTACAGAAGAGCAGTT+GGG 0.548649 4:+61227152 MsaT020959.1:CDS
GCAAAAGTTCTGTTGCAGAC+GGG 0.549592 4:-61223757 None:intergenic
TGCGTCCTCAATCCTCAGAA+AGG 0.551365 4:+61228113 MsaT020959.1:CDS
TCAGGCACTTCCCAGACTAA+GGG 0.554371 4:+61228387 MsaT020959.1:CDS
TCGACATCTCGAACTTAAGA+AGG 0.554982 4:+61231741 MsaT020959.1:CDS
GTTTGTGATAAACCCATCTC+GGG 0.555876 4:-61216445 None:intergenic
TGTTGCAGACGGGCGATCTG+AGG 0.556149 4:-61223747 None:intergenic
CAAACCACGAATAGAAGCTC+GGG 0.556605 4:+61217215 MsaT020959.1:CDS
CTCCAGTTGTATCAGCAGGA+TGG 0.556693 4:-61223372 None:intergenic
CGACAATGAAGGTGAGAAAG+AGG 0.557508 4:+61217386 MsaT020959.1:CDS
TCTGGTGGATGGTTTGGTAG+GGG 0.558147 4:+61217362 MsaT020959.1:CDS
GGTTTGTGATAAACCCATCT+CGG 0.560922 4:-61216446 None:intergenic
ATGGGCAAGGAATAATTCAC+CGG 0.561143 4:+61222798 MsaT020959.1:CDS
TCAAGTAGATCTCTGGTGGA+TGG 0.561333 4:+61217351 MsaT020959.1:CDS
TACAAATGGAGTACTGTCCC+AGG 0.564051 4:+61221423 MsaT020959.1:CDS
TCAGTGGCTATGGAGAGTCC+TGG 0.564268 4:+61217121 MsaT020959.1:CDS
CCAAACCACGAATAGAAGCT+CGG 0.564427 4:+61217214 MsaT020959.1:CDS
TGACATGGGTTATGAGGATG+TGG 0.564466 4:+61215922 None:intergenic
GAATCTAGTCAAGTTTCTAT+CGG 0.564738 4:+61231783 MsaT020959.1:CDS
TGGTCTGTTGGTGGAACGCA+TGG 0.565726 4:+61230683 MsaT020959.1:CDS
ACTGTAGGTTTGAGATTCTG+TGG 0.565746 4:+61228355 MsaT020959.1:CDS
GATGATCTTTAATTTAGTTG+AGG 0.566294 4:+61216671 MsaT020959.1:CDS
TACAACATAATCTCGGACCT+CGG 0.567654 4:-61224995 None:intergenic
TGATTGAGTATTATTACTGA+AGG 0.568572 4:+61230771 MsaT020959.1:intron
TGCAACTTGGGACACTTGAA+AGG 0.569087 4:-61216415 None:intergenic
GGAAGTTCTTGCAATATGAA+CGG 0.569290 4:-61217264 None:intergenic
GAAACTCCAGTTGTATCAGC+AGG 0.570373 4:-61223376 None:intergenic
GGTGCAATTTGGTCATGGAC+TGG 0.570565 4:+61227954 MsaT020959.1:CDS
CTCATGGGAAAGTTCAAGCA+TGG 0.570933 4:-61225239 None:intergenic
CAATCCTCCAAATTCTCAAG+AGG 0.572952 4:-61228557 None:intergenic
GAATGCATTTCCTCCACGAA+TGG 0.573668 4:+61223781 MsaT020959.1:CDS
GAAAGGCAAACGCAGCTCAT+GGG 0.573769 4:-61225254 None:intergenic
AGTAATCTCACAGATTCAGT+TGG 0.574686 4:-61216735 None:intergenic
GCATCAAAGAATATGTTACT+TGG 0.576433 4:-61222830 None:intergenic
GAGGCATCTAACTTAGAGGA+AGG 0.577615 4:-61217192 None:intergenic
GTTTGAGATGCTTGGTGATG+AGG 0.577776 4:-61218334 None:intergenic
CTTGTGTGCTCAAGAGGAGG+AGG 0.578123 4:+61230660 MsaT020959.1:CDS
GATATAATCCAGTTCACGAA+AGG 0.580057 4:-61225271 None:intergenic
GTTGCTTAAATCCATATGGA+GGG 0.580716 4:-61231832 None:intergenic
CTAAACCATGCTGACCTCCT+GGG 0.581294 4:+61227933 MsaT020959.1:CDS
GCACACAAGAATATTGATGC+TGG 0.582938 4:-61230646 None:intergenic
GGAAACTCAGCAACCCATGA+AGG 0.582976 4:-61223684 None:intergenic
ATGAAGTTCCTTTACCAAGA+GGG 0.584316 4:-61218934 None:intergenic
AAATATCACCTTTATGACCT+CGG 0.588953 4:-61227511 None:intergenic
AGGAAATCCTCCAACCGTGT+GGG 0.590340 4:+61230349 MsaT020959.1:CDS
AGTTCTGGATCACTTTCTGA+AGG 0.591260 4:+61229796 MsaT020959.1:CDS
TCATTCAAGTAGATCTCTGG+TGG 0.591402 4:+61217347 MsaT020959.1:CDS
AACTCAGCAACCCATGAAGG+TGG 0.591480 4:-61223681 None:intergenic
TTGCACCCAGGAGGTCAGCA+TGG 0.592320 4:-61227938 None:intergenic
GAGCCTCCAAGATCAGAAGA+AGG 0.592708 4:-61218860 None:intergenic
GGTAGAGCACCCCTTAGTCT+GGG 0.593666 4:-61228397 None:intergenic
ACTGGGTTTAGCTGAAGCTA+TGG 0.593755 4:+61228318 MsaT020959.1:CDS
ACAAAACACATTCGTCAGGT+TGG 0.597300 4:+61224916 MsaT020959.1:CDS
TGTTGCTTAAATCCATATGG+AGG 0.597908 4:-61231833 None:intergenic
ACTTGAAAGGATACCCAGGC+AGG 0.598421 4:-61216402 None:intergenic
TTGGTAGGGGACGACAATGA+AGG 0.598533 4:+61217375 MsaT020959.1:CDS
AAGGATAGTCCCCACACGGT+TGG 0.601671 4:-61230359 None:intergenic
GGCCAATTTAAATGCTAGGG+AGG 0.603128 4:+61216641 MsaT020959.1:intron
GTTCAAGCATGGCTCCACCA+TGG 0.611898 4:-61225228 None:intergenic
ACACAGACTCAAAGTAGCAG+AGG 0.614486 4:+61227989 MsaT020959.1:CDS
GGAAATCCTCCAACCGTGTG+GGG 0.614949 4:+61230350 MsaT020959.1:CDS
GTAAATAGGTTGCAGACTGT+AGG 0.616647 4:+61228340 MsaT020959.1:CDS
TTGCTTAAATCCATATGGAG+GGG 0.616855 4:-61231831 None:intergenic
GCCAATTTAAATGCTAGGGA+GGG 0.619171 4:+61216642 MsaT020959.1:CDS
CAAAATGGGCAGTGATAAGG+CGG 0.620404 4:+61228140 MsaT020959.1:CDS
ACAGCTCCTGAGATTGAGCA+AGG 0.622634 4:+61223436 MsaT020959.1:CDS
TGACATCTACAACATAATCT+CGG 0.622806 4:-61225002 None:intergenic
TATTTGGCGAAACAAATGCC+AGG 0.625503 4:-61222753 None:intergenic
TCATATCTTCAAGAAACACC+TGG 0.628086 4:+61218721 MsaT020959.1:CDS
TAGCTGAAAGTAGAGCTCGC+TGG 0.629194 4:-61221308 None:intergenic
CCTGCCAAATTAGATACTGT+CGG 0.629783 4:+61217285 MsaT020959.1:CDS
TTCTTATGGTGATCCTGCTG+GGG 0.630503 4:+61221274 MsaT020959.1:CDS
AAGGTTTGGCACACATACAT+GGG 0.632113 4:+61222780 MsaT020959.1:CDS
ATTCTTGTGTGCTCAAGAGG+AGG 0.635747 4:+61230657 MsaT020959.1:CDS
GCAGTTAAACTCCTGACCCA+TGG 0.640969 4:+61225211 MsaT020959.1:CDS
AAGGAAATCCTCCAACCGTG+TGG 0.642015 4:+61230348 MsaT020959.1:CDS
TACCTTTAGAGGCACAAACA+AGG 0.642091 4:-61218479 None:intergenic
CATAGATGAACTGTGTCCCA+AGG 0.642110 4:+61217044 MsaT020959.1:CDS
CAGGCACTTCCCAGACTAAG+GGG 0.643076 4:+61228388 MsaT020959.1:CDS
TTCGTCAGGTTGGTAGATTG+GGG 0.646070 4:+61224926 MsaT020959.1:CDS
GAACTGGATTATATCTAACC+AGG 0.651259 4:+61225279 MsaT020959.1:CDS
GCTCTGTGAGACTTGGATCA+GGG 0.655844 4:-61230839 None:intergenic
GATATTGACCTGTTAAACTG+TGG 0.657442 4:-61225096 None:intergenic
ATGGAGTCTGAATTGTTGGA+TGG 0.659519 4:+61223800 MsaT020959.1:CDS
AACAGAGCTGTACAATTTAG+GGG 0.661067 4:+61218530 MsaT020959.1:CDS
TGACATGTACAGCTTAGGAG+TGG 0.664023 4:+61223575 MsaT020959.1:CDS
GTTAAACTCCTGACCCATGG+TGG 0.667834 4:+61225214 MsaT020959.1:CDS
CATTTGGGACTGCAATGGAG+AGG 0.671627 4:+61223619 MsaT020959.1:CDS
GCGAACAATGCAGAAATCAG+AGG 0.672701 4:+61224837 MsaT020959.1:CDS
TTGGCACACATACATGGGCA+AGG 0.672832 4:+61222785 MsaT020959.1:CDS
GGACACTTGAAAGGATACCC+AGG 0.680449 4:-61216406 None:intergenic
TCCATGACCAAATTGCACCC+AGG 0.680460 4:-61227950 None:intergenic
TTGAGGCAAAGAGTCAGCCA+AGG 0.682964 4:-61218502 None:intergenic
TGGGCAAGGAATAATTCACC+GGG 0.683427 4:+61222799 MsaT020959.1:CDS
ATACCTGACAACAAGAAGAG+CGG 0.693866 4:-61215951 None:intergenic
ACAATGTAAATAGGTCATGG+TGG 0.696536 4:+61219230 MsaT020959.1:intron
TGGTACTTCAGCATTGACAG+AGG 0.697216 4:+61227488 MsaT020959.1:CDS
AGAATGGCACCTGAAGGTAA+CGG 0.705934 4:-61227189 None:intergenic
ATGACCAAATTGCACCCAGG+AGG 0.706168 4:-61227947 None:intergenic
GTGAAAGGATAGTCCCCACA+CGG 0.714598 4:-61230363 None:intergenic
AATTCAGACTCCATTCGTGG+AGG 0.716408 4:-61223791 None:intergenic
TTATGTTGTAGATGTCAACA+AGG 0.719639 4:+61225008 MsaT020959.1:CDS
AGGCAAGCACCTGATCAAGG+AGG 0.727142 4:-61216492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 61215926 61231849 61215926 ID=MsaG020959
Chr4 mRNA 61215926 61231849 61215926 ID=MsaT020959.1;Parent=MsaG020959
Chr4 exon 61215926 61215969 61215926 ID=MsaT020959.1.exon1;Parent=MsaT020959.1
Chr4 CDS 61215926 61215969 61215926 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61216399 61216504 61216399 ID=MsaT020959.1.exon2;Parent=MsaT020959.1
Chr4 CDS 61216399 61216504 61216399 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61216642 61216746 61216642 ID=MsaT020959.1.exon3;Parent=MsaT020959.1
Chr4 CDS 61216642 61216746 61216642 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61217018 61217407 61217018 ID=MsaT020959.1.exon4;Parent=MsaT020959.1
Chr4 CDS 61217018 61217407 61217018 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61218250 61218378 61218250 ID=MsaT020959.1.exon5;Parent=MsaT020959.1
Chr4 CDS 61218250 61218378 61218250 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61218465 61218551 61218465 ID=MsaT020959.1.exon6;Parent=MsaT020959.1
Chr4 CDS 61218465 61218551 61218465 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61218656 61218742 61218656 ID=MsaT020959.1.exon7;Parent=MsaT020959.1
Chr4 CDS 61218656 61218742 61218656 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61218830 61218941 61218830 ID=MsaT020959.1.exon8;Parent=MsaT020959.1
Chr4 CDS 61218830 61218941 61218830 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61219243 61219354 61219243 ID=MsaT020959.1.exon9;Parent=MsaT020959.1
Chr4 CDS 61219243 61219354 61219243 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61220971 61221025 61220971 ID=MsaT020959.1.exon10;Parent=MsaT020959.1
Chr4 CDS 61220971 61221025 61220971 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61221248 61221444 61221248 ID=MsaT020959.1.exon11;Parent=MsaT020959.1
Chr4 CDS 61221248 61221444 61221248 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61222703 61222887 61222703 ID=MsaT020959.1.exon12;Parent=MsaT020959.1
Chr4 CDS 61222703 61222887 61222703 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61223332 61223480 61223332 ID=MsaT020959.1.exon13;Parent=MsaT020959.1
Chr4 CDS 61223332 61223480 61223332 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61223573 61223700 61223573 ID=MsaT020959.1.exon14;Parent=MsaT020959.1
Chr4 CDS 61223573 61223700 61223573 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61223745 61223821 61223745 ID=MsaT020959.1.exon15;Parent=MsaT020959.1
Chr4 CDS 61223745 61223821 61223745 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61224830 61225109 61224830 ID=MsaT020959.1.exon16;Parent=MsaT020959.1
Chr4 CDS 61224830 61225109 61224830 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61225207 61225300 61225207 ID=MsaT020959.1.exon17;Parent=MsaT020959.1
Chr4 CDS 61225207 61225300 61225207 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61227121 61227201 61227121 ID=MsaT020959.1.exon18;Parent=MsaT020959.1
Chr4 CDS 61227121 61227201 61227121 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61227468 61227524 61227468 ID=MsaT020959.1.exon19;Parent=MsaT020959.1
Chr4 CDS 61227468 61227524 61227468 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61227879 61228010 61227879 ID=MsaT020959.1.exon20;Parent=MsaT020959.1
Chr4 CDS 61227879 61228010 61227879 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61228091 61228174 61228091 ID=MsaT020959.1.exon21;Parent=MsaT020959.1
Chr4 CDS 61228091 61228174 61228091 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61228316 61228424 61228316 ID=MsaT020959.1.exon22;Parent=MsaT020959.1
Chr4 CDS 61228316 61228424 61228316 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61228511 61228647 61228511 ID=MsaT020959.1.exon23;Parent=MsaT020959.1
Chr4 CDS 61228511 61228647 61228511 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61229775 61229882 61229775 ID=MsaT020959.1.exon24;Parent=MsaT020959.1
Chr4 CDS 61229775 61229882 61229775 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61230328 61230431 61230328 ID=MsaT020959.1.exon25;Parent=MsaT020959.1
Chr4 CDS 61230328 61230431 61230328 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61230638 61230724 61230638 ID=MsaT020959.1.exon26;Parent=MsaT020959.1
Chr4 CDS 61230638 61230724 61230638 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61230779 61230929 61230779 ID=MsaT020959.1.exon27;Parent=MsaT020959.1
Chr4 CDS 61230779 61230929 61230779 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Chr4 exon 61231739 61231849 61231739 ID=MsaT020959.1.exon28;Parent=MsaT020959.1
Chr4 CDS 61231739 61231849 61231739 ID=cds.MsaT020959.1;Parent=MsaT020959.1
Gene Sequence

>MsaT020959.1

ATGGGTTATGAGGATGTGGATGTTTCCGCTCTTCTTGTTGTCAGGTGCCTGCCTGGGTATCCTTTCAAGTGTCCCAAGTTGCAGATTACTCCCGAGATGGGTTTATCACAAACCGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCCAATTTAAATGCTAGGGAGGGACGAGTGATGATCTTTAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCTAAGTTTTCACACTCAACTACAGAGGGCATAGATGAACTGTGTCCCAAGGATATGGCATCTTCAAATAAGAATAGATCTTTTGTCTATGGTTTCATCGACCTTTTCAGTGGCTATGGAGAGTCCTGGAATTGGGGTTTTGGAATTGATGAACCTGCTGTAAAAATTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAACCACGAATAGAAGCTCGGGAAAAAAAATCTGATAGCAAGGAAAACCCGTTCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTCGGAGAAGTTAGTGAAGACAATAACAATAGCTCAACTTTAACTCATTCAAGTAGATCTCTGGTGGATGGTTTGGTAGGGGACGACAATGAAGGTGAGAAAGAGTATTTTATTGTGGATGAGTATACAACAGAAGATAACAAAGATATGTCTGACAGTGAGTCTACAGAGTCTCTATCTTCTGTGTCGCCTCATCACCAAGCATCTCAAACAATAGAAAAGGATCTAATAATGGTTCACATGCTTCGCCTTGTTTGTGCCTCTAAAGGTACCTTGGCTGACTCTTTGCCTCAATTAGCAACAGAGCTGTACAATTTAGGGATATTTTCTGACTCGGCACGTGATATGGCATCAAAACCACCTTCCCTTTTCAACAAAACCTTTGATCATATCTTCAAGAAACACCTGGCATCATCGAGAATATCTCAATTTTGGACACCTTCTTCTGATCTTGGAGGCTCTAATACAGTTCAACACAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGCCCTCTTGGTCATGGTGGTTTTGGTCACGTTGTGTTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACGCTTTCTCGTTTACAACATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTGCAGATTCTTATGGTGATCCTGCTGGGGAATCAAGAACTCCAGCGAGCTCTACTTTCAGCTACAAAGCTGCAAGCTCTACTTTCAGCTACAAAGCTGCAAGCTCCAATGATGCTATTGGGCTTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAATTGGCCTGGCATTTGTTTCGCCAAATAGTAGAAGGTTTGGCACACATACATGGGCAAGGAATAATTCACCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGACTTTGGTCTCGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTAGCCCATCCTGCTGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTCTATACAGCTCCTGAGATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGGACTGCAATGGAGAGGCACGTTGTTTTATCCGATCTGAAACAGAAAGCGAAGTTTCCACCTTCATGGGTTGCTGAGTCCTCAGATCGCCCGTCTGCAACAGAACTTTTGCAGAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTGGATGATATCCTGCGAACAATGCAGAAATCAGAGGATACAAGCATTTACGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGATAACAGTTCATCCATTCAGCACACAGATTTTGTAACCGAGGTCCGAGATTATGTTGTAGATGTCAACAAGGAAATTTTCAGGCAGCATTGTGCTAAACACCTAGAAATATCACCAATGCGATTATTGGATGATTGTCCACAGTTTAACAGAAATGCAGTTAAACTCCTGACCCATGGTGGAGCCATGCTTGAACTTTCCCATGAGCTGCGTTTGCCTTTCGTGAACTGGATTATATCTAACCAGATATCTTCATTCAAACGATACGAGATATCATACGTTTACAGAAGAGCAGTTGGGCATTCATCACCAAACCGTTACCTTCAGGGAGATTTTGACATTATTGGTGGTACTTCAGCATTGACAGAGGCCGAGGTCATAAAGGTCACGAAAGATATAGTCACTTGTTTTTTCCATGAAGACTTGTGTGACATTCATCTAAACCATGCTGACCTCCTGGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGTCCTCAATCCTCAGAAAGGAAATCAAAATGGGCAGTGATAAGGCGGCAGCTTCTGCAGGAACTGGGTTTAGCTGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTTTGAGATTCTGTGGATCTGCAGGTCAGGCACTTCCCAGACTAAGGGGTGCTCTACCATCTGATAAGCGTACCTTCAAGGCACTTGATGAATTGTCTGAGCTTGCCAGCCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGCCGCCAAACGAAAGTTATCATAGAGATTTGTTTTTTCAGATATACTTAAGGAAGGAGAACAGTTCTGGATCACTTTCTGAAGGTGTCTTGCTAGCTGTTGGTGGTAGATATGACTATTTGCTTCATCAGTTGAGGAGTAGTGACTATTCTGTCCTTTCTGCAACAGAAAGGAAATCCTCCAACCGTGTGGGGACTATCCTTTCACAAGAGACAATGATTCAGAATTGTCCTGTAGATTTTAAGCATAATCGAAATGAAGCCAGCATCAATATTCTTGTGTGCTCAAGAGGAGGAGGTGGTCTGTTGGTGGAACGCATGGAACTAGTTGCTGAATTATGTATTATTACTGAAGGTTCTGCTCATTCATCTTTCTTGTCATTAGGCGAATTTGTTCCTGTCCCTGATCCAAGTCTCACAGAGCAGTATGAGTATGCCAATGAACATGATATCAAATGTCTCGTTATTATTACAGATGCAGGTTTAGTTAAGGTTCGACATCTCGAACTTAAGAAGGAGAAAAATGTTGAGCGAGAGAATCTAGTCAAGTTTCTATCGGATGCTATGGCAACACAATTCAGAAACCCCTCCATATGGATTTAA
Protein sequence

>MsaT020959.1

MGYEDVDVSALLVVRCLPGYPFKCPKLQITPEMGLSQTDANKLLSLLLDQANLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFSHSTTEGIDELCPKDMASSNKNRSFVYGFIDLFSGYGESWNWGFGIDEPAVKISSLPSSKLDASKPRIEAREKKSDSKENPFILQELPAKLDTVGEVSEDNNNSSTLTHSSRSLVDGLVGDDNEGEKEYFIVDEYTTEDNKDMSDSESTESLSSVSPHHQASQTIEKDLIMVHMLRLVCASKGTLADSLPQLATELYNLGIFSDSARDMASKPPSLFNKTFDHIFKKHLASSRISQFWTPSSDLGGSNTVQHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVADSYGDPAGESRTPASSTFSYKAASSTFSYKAASSNDAIGLENQLESTYLYIQMEYCPRTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKAKFPPSWVAESSDRPSATELLQNAFPPRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRQVGRLGSVGDNSSSIQHTDFVTEVRDYVVDVNKEIFRQHCAKHLEISPMRLLDDCPQFNRNAVKLLTHGGAMLELSHELRLPFVNWIISNQISSFKRYEISYVYRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTKDIVTCFFHEDLCDIHLNHADLLGAIWSWTGIKVEHRLKVAELLSMMGSLRPQSSERKSKWAVIRRQLLQELGLAEAMVNRLQTVGLRFCGSAGQALPRLRGALPSDKRTFKALDELSELASLLRIWRIDKNVYIDALMPPNESYHRDLFFQIYLRKENSSGSLSEGVLLAVGGRYDYLLHQLRSSDYSVLSATERKSSNRVGTILSQETMIQNCPVDFKHNRNEASINILVCSRGGGGLLVERMELVAELCIITEGSAHSSFLSLGEFVPVPDPSLTEQYEYANEHDIKCLVIITDAGLVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPSIWI*