AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG021018

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG021018 MtrunA17_Chr4g0034221 98.663 1122 15 0 1 1122 1 1122 0.0 2282
MsaG021018 MtrunA17_Chr4g0051191 27.469 324 166 10 782 1105 159 413 1.11e-21 99.4
MsaG021018 MtrunA17_Chr2g0282321 31.466 232 120 7 796 1027 171 363 2.01e-21 99.0
MsaG021018 MtrunA17_Chr3g0090261 28.076 317 143 12 800 1107 96 336 2.40e-21 97.4
MsaG021018 MtrunA17_Chr3g0115171 29.530 298 138 11 806 1103 305 530 4.17e-21 99.0
MsaG021018 MtrunA17_Chr5g0424501 30.483 269 115 12 837 1103 241 439 3.17e-20 95.5
MsaG021018 MtrunA17_Chr3g0133541 27.844 334 152 13 802 1121 315 573 1.29e-19 94.7
MsaG021018 MtrunA17_Chr3g0117731 28.990 307 149 10 812 1116 81 320 1.58e-19 91.7
MsaG021018 MtrunA17_Chr5g0424581 30.483 269 115 12 837 1103 174 372 3.57e-19 91.3
MsaG021018 MtrunA17_Chr5g0424651 30.258 271 113 12 837 1103 370 568 5.49e-19 92.4
MsaG021018 MtrunA17_Chr1g0202831 28.996 269 121 13 837 1103 461 661 6.56e-19 92.8
MsaG021018 MtrunA17_Chr4g0059121 28.349 321 157 14 798 1115 70 320 6.94e-19 89.7
MsaG021018 MtrunA17_Chr5g0402601 26.415 371 179 14 770 1118 340 638 7.15e-19 92.4
MsaG021018 MtrunA17_Chr3g0130151 29.455 275 122 13 837 1110 294 497 1.01e-18 91.7
MsaG021018 MtrunA17_Chr5g0424531 29.478 268 119 10 837 1103 65 263 1.48e-18 87.4
MsaG021018 MtrunA17_Chr8g0386981 31.414 191 91 7 837 1027 458 608 8.79e-18 89.4
MsaG021018 MtrunA17_Chr4g0075541 27.148 291 145 10 809 1098 108 332 4.22e-17 84.7
MsaG021018 MtrunA17_Chr8g0388891 29.204 226 119 8 786 1008 133 320 6.54e-17 84.3
MsaG021018 MtrunA17_Chr1g0211611 31.727 249 123 13 800 1047 315 517 6.76e-17 85.9
MsaG021018 MtrunA17_Chr4g0047191 30.890 191 93 7 837 1027 95 246 1.75e-16 82.4
MsaG021018 MtrunA17_Chr4g0047211 30.890 191 93 7 837 1027 90 241 1.91e-16 82.4
MsaG021018 MtrunA17_Chr6g0479211 25.658 304 184 7 766 1066 23 287 2.05e-16 82.0
MsaG021018 MtrunA17_Chr4g0047201 34.667 150 73 5 878 1027 278 402 4.49e-16 82.8
MsaG021018 MtrunA17_Chr1g0202101 28.996 269 120 9 837 1103 328 527 4.87e-16 82.8
MsaG021018 MtrunA17_Chr3g0143531 28.617 311 145 12 811 1119 50 285 1.17e-15 79.0
MsaG021018 MtrunA17_Chr1g0171451 29.688 256 132 12 796 1047 424 635 2.73e-15 80.9
MsaG021018 MtrunA17_Chr7g0244621 28.390 236 117 8 877 1107 118 306 3.39e-15 79.0
MsaG021018 MtrunA17_Chr1g0179331 29.682 283 142 14 790 1060 559 796 3.68e-15 80.5
MsaG021018 MtrunA17_Chr5g0427651 26.437 348 169 15 776 1107 624 900 4.13e-15 80.5
MsaG021018 MtrunA17_Chr1g0191171 27.344 256 142 10 800 1054 703 915 4.30e-15 80.5
MsaG021018 MtrunA17_Chr2g0325851 29.289 239 120 11 800 1035 571 763 4.69e-15 80.1
MsaG021018 MtrunA17_Chr1g0209391 23.988 321 195 14 805 1122 316 590 5.83e-15 79.7
MsaG021018 MtrunA17_Chr6g0467631 24.422 303 183 12 805 1107 366 622 7.00e-15 79.3
MsaG021018 MtrunA17_Chr1g0175421 24.709 344 195 13 781 1112 123 414 9.81e-15 78.2
MsaG021018 MtrunA17_Chr4g0059181 24.615 325 180 12 792 1107 95 363 1.01e-14 77.8
MsaG021018 MtrunA17_Chr1g0151541 27.626 257 134 10 805 1052 674 887 1.24e-14 79.0
MsaG021018 MtrunA17_Chr3g0132791 28.226 248 129 9 805 1044 664 870 4.74e-14 77.0
MsaG021018 MtrunA17_Chr3g0117811 26.068 234 115 8 878 1107 155 334 6.40e-14 74.7
MsaG021018 MtrunA17_Chr3g0143951 26.962 293 164 16 817 1107 117 361 8.64e-14 74.7
MsaG021018 MtrunA17_Chr3g0095081 33.333 204 125 7 72 269 205 403 1.07e-13 75.9
MsaG021018 MtrunA17_Chr7g0217081 31.658 199 126 7 72 264 127 321 1.42e-13 75.5
MsaG021018 MtrunA17_Chr5g0394681 25.617 324 174 12 796 1107 93 361 2.43e-13 73.2
MsaG021018 MtrunA17_Chr7g0264461 27.815 302 154 15 837 1122 144 397 2.60e-13 73.6
MsaG021018 MtrunA17_Chr5g0423061 24.839 310 186 12 805 1113 328 591 2.98e-13 74.3
MsaG021018 MtrunA17_Chr5g0403051 26.300 327 184 14 785 1107 329 602 3.31e-13 73.9
MsaG021018 MtrunA17_Chr8g0376061 23.762 303 185 13 805 1107 352 608 4.34e-13 73.6
MsaG021018 MtrunA17_Chr2g0299991 32.895 152 79 5 877 1027 142 271 4.83e-13 72.0
MsaG021018 MtrunA17_Chr1g0205471 27.817 284 145 13 792 1068 30 260 5.45e-13 73.6
MsaG021018 MtrunA17_Chr1g0148501 30.126 239 123 10 878 1109 501 702 6.57e-13 73.2
MsaG021018 MtrunA17_Chr1g0205421 26.423 246 135 9 806 1043 21 228 8.00e-13 72.0
MsaG021018 MtrunA17_Chr4g0000431 33.117 154 83 3 878 1031 97 230 8.20e-13 72.8
MsaG021018 MtrunA17_Chr7g0272841 28.272 191 99 7 837 1027 121 273 1.21e-12 72.4
MsaG021018 MtrunA17_Chr6g0483931 24.342 304 182 13 805 1107 385 641 1.28e-12 72.4
MsaG021018 MtrunA17_Chr5g0429431 25.839 298 168 11 817 1109 154 403 1.30e-12 71.6
MsaG021018 MtrunA17_Chr4g0018701 32.227 211 128 9 72 276 194 395 1.47e-12 72.4
MsaG021018 MtrunA17_Chr5g0419441 27.564 312 155 16 797 1103 242 487 1.62e-12 72.0
MsaG021018 MtrunA17_Chr2g0294351 29.148 223 114 8 805 1027 486 664 1.74e-12 72.0
MsaG021018 MtrunA17_Chr2g0322401 30.594 219 99 10 837 1051 49 218 1.83e-12 70.9
MsaG021018 MtrunA17_Chr1g0209431 26.582 237 134 10 787 1022 336 533 2.01e-12 71.6
MsaG021018 MtrunA17_Chr1g0165221 29.386 228 149 9 39 258 227 450 2.43e-12 71.6
MsaG021018 MtrunA17_Chr3g0123791 29.915 234 113 11 796 1027 17 201 2.59e-12 69.7
MsaG021018 MtrunA17_Chr1g0180951 28.102 274 152 14 837 1107 139 370 2.60e-12 70.5
MsaG021018 MtrunA17_Chr8g0357611 27.004 237 141 7 791 1027 1375 1579 2.63e-12 71.6
MsaG021018 MtrunA17_Chr8g0357191 32.812 192 121 7 72 258 272 460 2.84e-12 71.2
MsaG021018 MtrunA17_Chr1g0209381 24.026 308 180 13 805 1108 344 601 2.91e-12 70.9
MsaG021018 MtrunA17_Chr1g0190951 29.437 231 114 11 837 1064 73 257 3.19e-12 70.9
MsaG021018 MtrunA17_Chr8g0374571 33.775 151 76 6 877 1027 93 219 3.38e-12 69.7
MsaG021018 MtrunA17_Chr7g0273851 27.437 277 144 14 792 1062 30 255 4.10e-12 70.5
MsaG021018 MtrunA17_Chr7g0245031 32.381 210 93 10 825 1029 182 347 4.96e-12 69.7
MsaG021018 MtrunA17_Chr5g0409041 28.417 278 138 12 837 1107 350 573 5.03e-12 70.1
MsaG021018 MtrunA17_Chr1g0148461 29.583 240 125 10 878 1108 508 712 5.20e-12 70.5
MsaG021018 MtrunA17_Chr6g0482711 28.054 221 114 8 812 1030 684 861 5.52e-12 70.5
MsaG021018 MtrunA17_Chr1g0148511 29.412 238 127 9 878 1109 494 696 5.97e-12 70.1
MsaG021018 MtrunA17_Chr5g0448661 30.189 212 105 12 816 1022 134 307 6.48e-12 68.9
MsaG021018 MtrunA17_Chr5g0430501 27.072 181 93 7 847 1027 67 208 6.84e-12 69.3
MsaG021018 MtrunA17_Chr1g0174251 24.540 326 186 13 800 1107 359 642 7.05e-12 69.7
MsaG021018 MtrunA17_Chr6g0467601 25.547 274 160 12 835 1107 196 426 7.47e-12 69.3
MsaG021018 MtrunA17_Chr8g0357151 32.292 192 122 6 72 258 356 544 7.52e-12 70.1
MsaG021018 MtrunA17_Chr7g0215641 34.437 151 93 5 111 258 74 221 7.90e-12 69.7
MsaG021018 MtrunA17_Chr1g0209361 24.013 304 183 13 805 1107 359 615 8.68e-12 69.7
MsaG021018 MtrunA17_Chr3g0101111 26.667 270 129 13 837 1103 75 278 9.38e-12 67.4
MsaG021018 MtrunA17_Chr8g0388941 24.762 315 169 13 801 1107 94 348 9.82e-12 68.2
MsaG021018 MtrunA17_Chr8g0351491 29.536 237 113 11 800 1031 22 209 1.16e-11 67.0
MsaG021018 MtrunA17_Chr1g0165951 32.524 206 127 9 38 235 149 350 1.18e-11 69.3
MsaG021018 MtrunA17_Chr3g0111431 23.620 326 192 12 792 1109 187 463 1.20e-11 68.6
MsaG021018 MtrunA17_Chr4g0028841 27.076 277 154 12 837 1107 273 507 1.28e-11 68.9
MsaG021018 MtrunA17_Chr1g0148491 28.571 238 129 9 878 1109 408 610 1.32e-11 68.9
MsaG021018 MtrunA17_Chr4g0061201 25.556 270 148 11 843 1108 862 1082 1.32e-11 69.3
MsaG021018 MtrunA17_Chr8g0362841 34.000 200 118 7 67 258 247 440 1.35e-11 68.9
MsaG021018 MtrunA17_Chr3g0132681 26.510 298 140 16 817 1103 50 279 1.37e-11 67.0
MsaG021018 MtrunA17_Chr2g0324171 24.679 312 176 13 807 1115 367 622 1.61e-11 68.6
MsaG021018 MtrunA17_Chr4g0055451 33.113 151 77 6 877 1027 75 201 1.70e-11 67.0
MsaG021018 MtrunA17_Chr4g0072741 29.319 191 103 6 837 1027 886 1044 1.80e-11 68.9
MsaG021018 MtrunA17_Chr2g0333691 28.107 338 177 20 775 1108 117 392 1.84e-11 67.8
MsaG021018 MtrunA17_Chr3g0103791 27.124 306 168 13 805 1107 148 401 1.92e-11 67.8
MsaG021018 MtrunA17_Chr3g0101091 27.757 263 143 12 837 1096 75 293 2.12e-11 66.2
MsaG021018 MtrunA17_Chr3g0101081 27.757 263 143 12 837 1096 75 293 2.12e-11 66.2
MsaG021018 MtrunA17_Chr5g0426521 30.973 226 114 9 806 1027 13 200 2.22e-11 66.6
MsaG021018 MtrunA17_Chr4g0035464 30.000 220 142 9 59 271 144 358 2.24e-11 68.6
MsaG021018 MtrunA17_Chr7g0251121 25.818 275 158 12 835 1107 409 639 2.25e-11 68.2
MsaG021018 MtrunA17_Chr8g0363371 33.000 200 120 7 67 258 217 410 2.49e-11 68.2
MsaG021018 MtrunA17_Chr8g0362431 31.628 215 117 8 72 258 184 396 2.52e-11 68.2
MsaG021018 MtrunA17_Chr4g0013131 31.937 191 92 11 837 1027 60 212 2.52e-11 67.4
MsaG021018 MtrunA17_Chr8g0381821 29.060 234 115 10 796 1027 16 200 2.99e-11 66.2
MsaG021018 MtrunA17_Chr2g0284011 28.452 239 107 11 806 1027 21 212 3.12e-11 67.0
MsaG021018 MtrunA17_Chr1g0158151 26.190 294 150 14 835 1116 427 665 3.64e-11 67.4
MsaG021018 MtrunA17_Chr8g0362871 30.698 215 119 8 72 258 176 388 4.33e-11 67.4
MsaG021018 MtrunA17_Chr8g0363061 31.628 215 117 8 72 258 382 594 4.39e-11 67.4
MsaG021018 MtrunA17_Chr8g0363281 33.023 215 114 8 72 258 201 413 4.46e-11 67.4
MsaG021018 MtrunA17_Chr3g0142271 27.536 276 158 11 837 1109 893 1129 4.92e-11 67.4
MsaG021018 MtrunA17_Chr8g0362961 32.719 217 112 8 72 258 626 838 4.94e-11 67.4
MsaG021018 MtrunA17_Chr6g0483731 24.579 297 169 14 813 1107 98 341 5.13e-11 65.9
MsaG021018 MtrunA17_Chr8g0353621 27.426 237 118 9 800 1031 16 203 5.15e-11 64.7
MsaG021018 MtrunA17_Chr8g0363121 33.000 200 120 7 67 258 205 398 5.22e-11 67.0
MsaG021018 MtrunA17_Chr8g0363401 33.500 200 119 7 67 258 210 403 5.60e-11 67.0
MsaG021018 MtrunA17_Chr3g0091461 30.734 218 138 8 39 247 276 489 5.66e-11 67.0
MsaG021018 MtrunA17_Chr3g0112391 25.912 274 158 10 835 1105 386 617 5.84e-11 66.6
MsaG021018 MtrunA17_Chr7g0225201 25.338 296 145 15 817 1103 51 279 6.14e-11 65.1
MsaG021018 MtrunA17_Chr1g0176301 30.544 239 133 10 32 258 137 354 6.20e-11 67.0
MsaG021018 MtrunA17_Chr1g0165211 25.857 321 153 14 806 1108 919 1172 6.50e-11 67.0
MsaG021018 MtrunA17_Chr1g0175411 26.531 245 131 10 786 1021 330 534 6.68e-11 66.6
MsaG021018 MtrunA17_Chr1g0157951 25.338 296 150 14 835 1116 222 460 6.74e-11 66.2
MsaG021018 MtrunA17_Chr5g0399911 33.113 151 77 6 877 1027 89 215 6.78e-11 65.5
MsaG021018 MtrunA17_Chr6g0483831 25.914 301 170 12 809 1109 15 262 8.08e-11 64.3
MsaG021018 MtrunA17_Chr1g0162301 33.113 151 77 6 877 1027 94 220 8.91e-11 65.1
MsaG021018 MtrunA17_Chr7g0215631 31.481 216 113 8 57 266 97 283 9.61e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG021018 AT1G04210.1 55.342 1095 459 12 33 1113 33 1111 0.0 1142
MsaG021018 AT4G31170.7 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.6 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.5 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.1 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.2 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.3 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT4G31170.8 27.215 316 163 10 792 1107 137 385 1.08e-23 105
MsaG021018 AT2G24360.1 26.453 344 169 12 780 1107 109 384 8.47e-23 102
MsaG021018 AT1G63700.1 28.090 267 126 9 837 1103 450 650 4.52e-20 97.1
MsaG021018 AT1G63700.2 28.090 267 126 9 837 1103 450 650 4.52e-20 97.1
MsaG021018 AT5G66850.2 27.597 308 148 11 806 1110 369 604 8.66e-19 92.4
MsaG021018 AT5G66850.1 27.597 308 148 11 806 1110 369 604 1.09e-18 92.4
MsaG021018 AT4G08500.1 30.872 298 135 12 806 1103 355 581 1.30e-18 91.7
MsaG021018 AT5G50180.1 29.653 317 150 13 804 1114 38 287 4.12e-18 87.8
MsaG021018 AT1G62400.1 28.000 300 149 11 809 1107 107 340 8.70e-18 87.4
MsaG021018 AT4G31170.9 30.198 202 104 7 792 993 137 301 1.52e-17 85.5
MsaG021018 AT4G31170.10 30.198 202 104 7 792 993 137 301 1.52e-17 85.5
MsaG021018 AT4G31170.4 30.198 202 104 7 792 993 137 301 1.52e-17 85.5
MsaG021018 AT4G12020.4 31.878 229 94 8 878 1103 1694 1863 4.83e-17 87.8
MsaG021018 AT4G12020.2 31.878 229 94 8 878 1103 1702 1871 4.92e-17 87.8
MsaG021018 AT4G12020.5 31.878 229 94 8 878 1103 1627 1796 5.30e-17 87.4
MsaG021018 AT3G27560.1 29.555 247 123 8 877 1119 99 298 7.70e-17 84.0
MsaG021018 AT3G46930.6 30.000 220 108 8 811 1027 128 304 1.76e-16 82.8
MsaG021018 AT3G63260.1 25.610 328 178 11 792 1107 89 362 2.25e-16 83.2
MsaG021018 AT3G46930.4 30.137 219 109 8 811 1027 224 400 2.30e-16 83.6
MsaG021018 AT3G46930.3 30.137 219 109 8 811 1027 224 400 2.47e-16 83.6
MsaG021018 AT3G46930.5 30.000 220 108 8 811 1027 189 365 4.13e-16 82.4
MsaG021018 AT3G46930.2 30.088 226 113 9 805 1027 217 400 4.24e-16 83.2
MsaG021018 AT4G08470.1 30.224 268 120 10 836 1103 351 551 5.78e-16 83.2
MsaG021018 AT3G46930.1 30.088 226 113 9 805 1027 182 365 8.53e-16 82.0
MsaG021018 AT4G08470.3 30.224 268 120 10 836 1103 269 469 8.99e-16 82.0
MsaG021018 AT5G58950.1 27.350 234 123 7 798 1027 219 409 1.52e-15 81.6
MsaG021018 AT3G53930.1 30.732 205 98 8 828 1029 58 221 3.06e-15 81.3
MsaG021018 AT3G53930.2 30.732 205 98 8 828 1029 58 221 3.09e-15 81.3
MsaG021018 AT3G61960.1 28.936 235 121 11 796 1029 22 211 3.71e-15 80.9
MsaG021018 AT5G50000.1 25.538 325 173 11 798 1107 86 356 4.11e-15 79.3
MsaG021018 AT3G61960.2 28.936 235 121 11 796 1029 22 211 4.11e-15 80.5
MsaG021018 AT1G69220.1 28.846 312 151 16 797 1103 252 497 5.76e-15 80.5
MsaG021018 AT4G14480.1 25.000 296 170 10 811 1103 41 287 6.03e-15 79.3
MsaG021018 AT4G38470.2 27.562 283 158 12 766 1047 270 506 6.39e-15 79.7
MsaG021018 AT4G38470.1 27.562 283 158 12 766 1047 270 506 6.47e-15 79.7
MsaG021018 AT5G03730.2 29.583 240 124 10 790 1027 555 751 7.28e-15 80.1
MsaG021018 AT5G03730.1 29.583 240 124 10 790 1027 555 751 7.28e-15 80.1
MsaG021018 AT2G37840.1 27.570 214 116 8 817 1029 38 213 1.15e-14 79.3
MsaG021018 AT5G40540.3 29.630 243 118 8 877 1114 2 196 1.19e-14 75.9
MsaG021018 AT3G06030.1 30.000 200 84 7 837 1027 121 273 1.39e-14 79.0
MsaG021018 AT3G63260.2 27.530 247 141 8 792 1027 89 308 1.87e-14 76.6
MsaG021018 AT1G69220.2 28.664 307 148 16 802 1103 230 470 1.96e-14 78.6
MsaG021018 AT5G40540.2 29.630 243 118 8 877 1114 23 217 2.18e-14 75.5
MsaG021018 AT4G24480.2 26.115 314 161 12 796 1107 679 923 3.09e-14 78.2
MsaG021018 AT4G24480.3 26.115 314 161 12 796 1107 679 923 3.32e-14 78.2
MsaG021018 AT2G35620.3 28.832 274 142 10 837 1107 348 571 3.60e-14 77.4
MsaG021018 AT2G35620.1 28.832 274 142 10 837 1107 348 571 3.60e-14 77.4
MsaG021018 AT2G35620.2 28.832 274 142 10 837 1107 348 571 3.60e-14 77.4
MsaG021018 AT2G35620.4 28.832 274 142 10 837 1107 348 571 3.60e-14 77.4
MsaG021018 AT5G40540.1 27.097 310 155 12 804 1108 44 287 3.68e-14 75.9
MsaG021018 AT3G22750.1 28.326 233 111 8 878 1107 170 349 3.95e-14 76.3
MsaG021018 AT4G08480.1 27.517 298 145 10 806 1103 523 749 4.02e-14 77.8
MsaG021018 AT1G49180.2 31.088 193 95 8 837 1029 54 208 5.24e-14 75.9
MsaG021018 AT5G11850.1 28.326 233 120 10 800 1030 623 810 5.55e-14 77.4
MsaG021018 AT1G49180.1 33.333 153 78 6 877 1029 80 208 6.95e-14 75.5
MsaG021018 AT3G46160.1 29.630 189 107 7 835 1022 105 268 7.18e-14 75.5
MsaG021018 AT3G01490.1 24.611 321 185 11 792 1107 114 382 7.47e-14 75.5
MsaG021018 AT2G17440.1 30.460 174 113 5 67 237 286 454 9.96e-14 75.9
MsaG021018 AT5G18700.1 28.372 215 112 8 835 1047 44 218 1.14e-13 76.6
MsaG021018 AT5G50000.2 27.459 244 136 8 798 1027 86 302 1.44e-13 73.9
MsaG021018 AT5G44700.1 34.146 205 125 7 72 271 136 335 3.76e-13 74.7
MsaG021018 AT5G38210.1 25.083 303 181 10 805 1107 374 630 4.27e-13 74.3
MsaG021018 AT5G38210.2 25.083 303 181 10 805 1107 386 642 4.85e-13 73.9
MsaG021018 AT1G67890.1 28.440 218 110 9 812 1027 511 684 5.09e-13 73.9
MsaG021018 AT5G38210.3 25.083 303 181 10 805 1107 368 624 5.21e-13 73.9
MsaG021018 AT1G25390.1 25.733 307 174 15 805 1106 307 564 5.30e-13 73.9
MsaG021018 AT1G25390.2 25.733 307 174 15 805 1106 307 564 5.30e-13 73.9
MsaG021018 AT1G66880.3 26.752 314 166 13 805 1109 362 620 7.49e-13 73.6
MsaG021018 AT4G24480.1 25.397 315 167 12 796 1107 679 928 7.98e-13 73.6
MsaG021018 AT1G66880.2 26.752 314 166 13 805 1109 604 862 8.23e-13 73.6
MsaG021018 AT1G67890.3 28.440 218 110 9 812 1027 511 684 8.44e-13 73.2
MsaG021018 AT1G67890.2 28.440 218 110 9 812 1027 511 684 8.44e-13 73.2
MsaG021018 AT4G36180.1 27.636 275 154 10 837 1109 885 1116 1.08e-12 73.2
MsaG021018 AT1G67890.4 28.440 218 110 9 812 1027 383 556 1.16e-12 72.8
MsaG021018 AT1G08720.1 27.155 232 122 8 805 1030 680 870 1.28e-12 72.8
MsaG021018 AT1G18390.2 24.116 311 186 12 805 1115 360 620 1.41e-12 72.4
MsaG021018 AT4G20140.1 30.864 243 154 10 37 271 98 334 1.42e-12 72.8
MsaG021018 AT1G76360.1 27.465 284 157 15 837 1117 217 454 1.50e-12 72.0
MsaG021018 AT1G24030.6 26.937 271 144 11 837 1100 18 241 1.52e-12 69.7
MsaG021018 AT1G24030.3 27.306 271 143 12 837 1100 55 278 1.68e-12 70.1
MsaG021018 AT1G08720.2 27.155 232 122 8 805 1030 680 870 1.69e-12 72.4
MsaG021018 AT1G18390.1 24.116 311 186 12 805 1115 354 614 1.77e-12 72.0
MsaG021018 AT2G23030.1 31.064 235 109 12 796 1027 16 200 1.85e-12 70.5
MsaG021018 AT1G66880.1 26.557 305 178 12 805 1109 983 1241 2.28e-12 72.4
MsaG021018 AT2G42550.1 27.083 288 149 16 831 1111 45 278 2.40e-12 70.1
MsaG021018 AT1G24030.2 27.306 271 143 12 837 1100 109 332 2.50e-12 70.5
MsaG021018 AT2G39110.1 27.372 274 155 13 837 1107 140 372 2.67e-12 70.9
MsaG021018 AT3G08720.1 30.303 264 120 14 801 1054 157 366 3.65e-12 70.5
MsaG021018 AT3G08720.3 30.303 264 120 14 801 1054 157 366 3.65e-12 70.5
MsaG021018 AT3G08720.4 30.303 264 120 14 801 1054 157 366 3.65e-12 70.5
MsaG021018 AT3G08720.2 30.303 264 120 14 801 1054 157 366 3.65e-12 70.5
MsaG021018 AT5G15730.1 25.818 275 143 9 837 1108 158 374 3.67e-12 70.5
MsaG021018 AT3G45790.1 32.124 193 105 7 835 1024 138 307 3.83e-12 70.1
MsaG021018 AT2G39110.2 27.372 274 155 13 837 1107 125 357 3.83e-12 70.1
MsaG021018 AT1G24030.1 27.306 271 143 12 837 1100 123 346 4.05e-12 69.7
MsaG021018 AT5G55830.1 24.367 316 180 11 802 1107 373 639 4.18e-12 70.9
MsaG021018 AT5G57610.1 29.319 191 103 6 837 1027 832 990 5.04e-12 71.2
MsaG021018 AT3G08730.1 29.787 235 110 10 806 1029 143 333 5.58e-12 70.1
MsaG021018 AT3G08730.2 29.787 235 110 10 806 1029 143 333 5.58e-12 70.1
MsaG021018 AT3G04530.1 34.337 166 84 6 877 1042 86 226 6.60e-12 68.2
MsaG021018 AT5G63650.1 34.437 151 75 6 877 1027 74 200 6.76e-12 68.9
MsaG021018 AT5G08590.1 33.775 151 76 6 877 1027 74 200 7.62e-12 68.9
MsaG021018 AT5G15730.3 25.497 302 158 11 810 1108 139 376 8.24e-12 69.3
MsaG021018 AT5G15730.2 25.497 302 158 11 810 1108 139 376 8.24e-12 69.3
MsaG021018 AT1G31420.2 28.417 278 138 12 837 1107 350 573 1.18e-11 69.3
MsaG021018 AT3G01490.2 25.311 241 149 8 792 1027 114 328 1.28e-11 68.2
MsaG021018 AT1G12970.1 32.673 202 127 6 37 234 187 383 1.47e-11 68.6
MsaG021018 AT2G23450.2 24.922 321 184 12 791 1107 353 620 1.49e-11 69.3
MsaG021018 AT2G23450.1 24.922 321 184 12 791 1107 353 620 1.49e-11 69.3
MsaG021018 AT3G53590.1 24.768 323 177 13 798 1109 625 892 2.13e-11 68.9
MsaG021018 AT3G46140.1 31.606 193 106 7 835 1024 138 307 2.26e-11 67.4
MsaG021018 AT5G07180.2 28.159 277 141 11 837 1108 599 822 2.81e-11 68.6
MsaG021018 AT5G07180.1 28.159 277 141 11 837 1108 695 918 3.44e-11 68.2
MsaG021018 AT4G35470.1 31.429 175 110 4 66 237 255 422 3.49e-11 67.8
MsaG021018 AT5G08590.2 33.108 148 75 6 880 1027 1 124 3.53e-11 65.9
MsaG021018 AT4G35470.2 31.429 175 110 4 66 237 255 422 4.34e-11 67.4
MsaG021018 AT5G40540.4 32.919 161 82 6 877 1032 99 238 4.40e-11 65.5
MsaG021018 AT1G49160.3 28.085 235 120 11 837 1068 124 312 5.04e-11 67.0
MsaG021018 AT1G08590.1 30.738 244 130 11 58 269 102 338 5.71e-11 67.8
MsaG021018 AT4G33950.2 33.113 151 77 6 877 1027 91 217 6.36e-11 65.9
MsaG021018 AT4G40010.1 33.987 153 73 7 877 1027 74 200 6.77e-11 65.9

Find 240 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTGCAAATTCCATATTT+TGG 0.121009 4:+61838263 MsaT021018.1:CDS
TCAAAATGTTAGTGAGATTT+AGG 0.187238 4:+61838657 MsaT021018.1:CDS
TGCTAGTTGAAAGAGGAATT+TGG 0.193301 4:-61836491 None:intergenic
CTCTTTGTATCTGATCATTT+TGG 0.207442 4:+61834700 MsaT021018.1:CDS
AGATATCTTCCTCCGGAAAT+TGG 0.209062 4:+61831230 MsaT021018.1:intron
TCGGGAATAGCGGCGGTTTC+CGG 0.211966 4:-61829958 None:intergenic
TTCGTTAAGCACCCAATTTC+CGG 0.217733 4:-61831242 None:intergenic
AAACTTCGAATATAATTCTT+TGG 0.223578 4:+61836814 MsaT021018.1:CDS
CTTCGATTCCGGTAGGGTTT+GGG 0.227200 4:-61830008 None:intergenic
GAAAAGGTTTCCTCACTTTC+CGG 0.228525 4:-61833498 None:intergenic
GTATTTGTCACTTCAATATA+AGG 0.232453 4:+61830403 MsaT021018.1:CDS
TTGAAAACGCTGAAATTCTT+TGG 0.235831 4:+61830171 MsaT021018.1:CDS
TCTAATTTGAAGCAGTTAAA+TGG 0.238157 4:+61834616 MsaT021018.1:CDS
GTCATTTGGATGTTTACTTC+TGG 0.243782 4:+61838232 MsaT021018.1:CDS
AACTTATTTGCGCCGGAGTT+TGG 0.255133 4:+61830204 MsaT021018.1:CDS
CTGTACCTTGCGAGCTAGTT+AGG 0.260994 4:+61835133 MsaT021018.1:CDS
ACTATCAAGGTTGGAGAGTT+TGG 0.263545 4:+61831394 MsaT021018.1:CDS
AGGGCACGCAAATCTGTTTC+TGG 0.277854 4:+61834751 MsaT021018.1:CDS
TCTTCGATTCCGGTAGGGTT+TGG 0.282784 4:-61830009 None:intergenic
TTGGGAGAAATCAGAATTCT+TGG 0.296196 4:+61836833 MsaT021018.1:CDS
TGCAACAGGAAGCTGATATT+TGG 0.296255 4:+61838210 MsaT021018.1:intron
TTCATGGATATGCTGTAATA+TGG 0.300573 4:+61833398 MsaT021018.1:CDS
TTCACTTTGCCCATTGTCTA+AGG 0.302512 4:-61834093 None:intergenic
GAAAGAGCTTGAGCTTTCTA+AGG 0.303753 4:+61830311 MsaT021018.1:CDS
ACATTAGTTCGGTGCAAATA+TGG 0.314424 4:+61836585 MsaT021018.1:CDS
GAAGCTGATATTTGGTCATT+TGG 0.319323 4:+61838218 MsaT021018.1:CDS
GAATCAGGTACTCCAAAATA+TGG 0.324280 4:-61838275 None:intergenic
TGTGTCCAAGCAGCATTTCA+TGG 0.327851 4:-61838618 None:intergenic
GTTTGGACCTGTCAAATAAT+AGG 0.330672 4:+61831411 MsaT021018.1:CDS
CTTTATTAAAATGATATTCC+AGG 0.331643 4:-61835181 None:intergenic
GCAGCAATCTCAGTCAAAAT+AGG 0.338759 4:-61830357 None:intergenic
ACTTATTTGCGCCGGAGTTT+GGG 0.339965 4:+61830205 MsaT021018.1:CDS
AACTTCGAATATAATTCTTT+GGG 0.342287 4:+61836815 MsaT021018.1:CDS
GCTAGTTGAAAGAGGAATTT+GGG 0.343487 4:-61836490 None:intergenic
AATTGGGTGCTTAACGAATC+TGG 0.345148 4:+61831247 MsaT021018.1:CDS
CCCTGTATAGTGGAAATATA+TGG 0.351120 4:+61836869 MsaT021018.1:CDS
TTTCTAGACTTGCAGGGTTT+AGG 0.352330 4:-61834194 None:intergenic
TCCATATATTTCCACTATAC+AGG 0.354739 4:-61836870 None:intergenic
AGAAAGATTGATATCTTCTA+TGG 0.358775 4:-61834860 None:intergenic
CCGTTTACCTGATGACTTCC+AGG 0.365094 4:-61833712 None:intergenic
TAGCAGTTCTTCTGTTGAAA+TGG 0.366960 4:+61833455 MsaT021018.1:CDS
CAGACAAAGGGATGAAGAAT+TGG 0.371121 4:+61834561 MsaT021018.1:intron
AGATGTCTCATGCGCTTTGT+TGG 0.376947 4:+61837151 MsaT021018.1:CDS
GGTTACACCTTCTTCGATTC+CGG 0.381415 4:-61830019 None:intergenic
GAATAACATACCTGTCTAAC+AGG 0.382077 4:-61834382 None:intergenic
TGCCATTCTGCTATCTGCTC+AGG 0.382902 4:+61834585 MsaT021018.1:CDS
AATTCAATCATTGTTCCAAT+TGG 0.383287 4:+61834925 MsaT021018.1:CDS
ACTTCAGAACTTAAGTCTTC+AGG 0.383512 4:+61831475 MsaT021018.1:CDS
TTCCGGTGGGGTTTCGTCGG+AGG 0.384198 4:-61829941 None:intergenic
ATTTATACTCGTGCTGCTTC+CGG 0.384916 4:-61834812 None:intergenic
TAGTCCATATGCATGATATT+TGG 0.388291 4:-61836895 None:intergenic
AGAGATGGAAAGGAATTATC+AGG 0.388777 4:-61836525 None:intergenic
AATTTCTGAACCAGAAAATC+TGG 0.389574 4:+61833863 MsaT021018.1:CDS
TGTACCTTGCGAGCTAGTTA+GGG 0.390296 4:+61835134 MsaT021018.1:CDS
TCAGCTGTAGGTCGTTCATT+TGG 0.397022 4:-61838589 None:intergenic
ACATTCTGTTCGATTGTGAT+AGG 0.397749 4:+61837219 MsaT021018.1:CDS
AACGGCAACCCACCAATTCC+CGG 0.406003 4:-61830270 None:intergenic
TCCGGTGGGGTTTCGTCGGA+GGG 0.412468 4:-61829940 None:intergenic
TAAATACCTGCAGAAATATT+CGG 0.413886 4:-61835274 None:intergenic
TAATTCTCAAGAGGCATAAA+CGG 0.413925 4:-61834323 None:intergenic
GATATCTTCCTCCGGAAATT+GGG 0.414343 4:+61831231 MsaT021018.1:intron
AAGGTATCGTCACCGGGAAT+TGG 0.416255 4:+61830258 MsaT021018.1:CDS
CGAGCTAGTTAGGGGTTACC+TGG 0.417649 4:+61835143 MsaT021018.1:CDS
CTATCATGGACGTGTGAATC+AGG 0.417672 4:-61838290 None:intergenic
AGAAGATATCAATCTTTCTA+TGG 0.419967 4:+61834864 MsaT021018.1:CDS
TCCTTGTTGATTTGTTTCAT+AGG 0.420696 4:+61838551 MsaT021018.1:CDS
GACACCAAATATCATGCATA+TGG 0.428562 4:+61836891 MsaT021018.1:CDS
TACATAGTTCGCATGACCTC+TGG 0.430682 4:-61837386 None:intergenic
GGAAAAGCAGAAGGTCTAGA+AGG 0.431505 4:-61830336 None:intergenic
TCTTCTATGGCATTAACAAC+TGG 0.431884 4:-61834847 None:intergenic
AAGCTTTAACTACATTAGTT+CGG 0.434269 4:+61836574 MsaT021018.1:CDS
CCAATTGGCTCTGTTCAGTA+CGG 0.434843 4:+61834940 MsaT021018.1:CDS
AGACAATGGGCAAAGTGAAC+AGG 0.437742 4:+61834097 MsaT021018.1:CDS
TCTGCTATCTGCTCAGGGAC+TGG 0.440616 4:+61834591 MsaT021018.1:CDS
AATAATAGGTTGACTTCGTT+AGG 0.441910 4:+61831425 MsaT021018.1:CDS
ACGCTTGAAGAGATGGTATC+AGG 0.444138 4:-61833651 None:intergenic
CAATTGGCTCTGTTCAGTAC+GGG 0.446917 4:+61834941 MsaT021018.1:CDS
CAAAGCGCATGAGACATCTT+TGG 0.448446 4:-61837147 None:intergenic
GGTGTAACCCTCGACGTATC+GGG 0.448455 4:+61830033 MsaT021018.1:CDS
TGTCTATGAAAGCAATTTGC+CGG 0.448891 4:+61833479 MsaT021018.1:CDS
AACAAAGAGGCATTCAGATC+GGG 0.450284 4:+61834160 MsaT021018.1:CDS
GGAATAGCGGCGGTTTCCGG+TGG 0.450315 4:-61829955 None:intergenic
GATCTCAACACTCGATGCTT+CGG 0.450332 4:-61836935 None:intergenic
ACCTCCTCCTTCTTTGTGCG+TGG 0.454273 4:+61837343 MsaT021018.1:CDS
ATTAAACCACCCACCGACTT+CGG 0.455982 4:-61830144 None:intergenic
GGATCTTCTTGCTTAACAAC+TGG 0.458038 4:-61833836 None:intergenic
TTTGTTGTGTTTCAGACAAA+GGG 0.459672 4:+61834549 MsaT021018.1:intron
GAATAGCGGCGGTTTCCGGT+GGG 0.460301 4:-61829954 None:intergenic
GATTCAATCTGGTGAAGAGC+TGG 0.462255 4:+61838495 MsaT021018.1:CDS
AGGTGTAACCCTCGACGTAT+CGG 0.465971 4:+61830032 MsaT021018.1:CDS
TGGAAAGGAATTATCAGGAC+TGG 0.466721 4:-61836520 None:intergenic
CGGCTTTGACCTCACTATCA+AGG 0.467927 4:+61831381 MsaT021018.1:CDS
GAATCATCGATCGGAGTGGT+GGG 0.470442 4:-61829985 None:intergenic
CATAAAAGCCATCTGATAGA+TGG 0.470894 4:-61834283 None:intergenic
TCAACTTCATCCTGGCTCCC+AGG 0.471851 4:-61834649 None:intergenic
TCACCAGATTGAATCATTGT+GGG 0.475459 4:-61838487 None:intergenic
TTCTCTTCTCTAATATCATA+CGG 0.478423 4:-61835246 None:intergenic
GAACCCACAATGATTCAATC+TGG 0.478717 4:+61838484 MsaT021018.1:CDS
TCATGGATTTCTTCAGCTGT+AGG 0.478876 4:-61838601 None:intergenic
TAATAAAGAGGAGTGATACA+TGG 0.481610 4:+61835196 MsaT021018.1:CDS
TTTAAACAAACCTGGGAGCC+AGG 0.485820 4:+61834639 MsaT021018.1:CDS
TCCTCATGCTCCTTAGACAA+TGG 0.486313 4:+61834083 MsaT021018.1:CDS
CCTCATGCTCCTTAGACAAT+GGG 0.486998 4:+61834084 MsaT021018.1:CDS
CTAGAGAAGTTGTCAGAAGC+TGG 0.492700 4:+61837086 MsaT021018.1:CDS
AAATCTGGAACTTCCGGTAC+CGG 0.492836 4:+61830059 MsaT021018.1:CDS
TTTGCAGCCTGGAAGTCATC+AGG 0.492845 4:+61833705 MsaT021018.1:CDS
TCTGAAGAATTCTCCGGTAC+CGG 0.497079 4:-61830072 None:intergenic
TGTTAATACGCTTGAAGAGA+TGG 0.503360 4:-61833658 None:intergenic
TGTCTCAGACAATGGAAGCC+TGG 0.503746 4:+61833917 MsaT021018.1:CDS
TTCGATTCCGGTAGGGTTTG+GGG 0.504097 4:-61830007 None:intergenic
GTCGAACATGTACAGACAAA+AGG 0.504161 4:-61834790 None:intergenic
ATAGAGGTGCTATTATAGAA+AGG 0.506477 4:+61834731 MsaT021018.1:CDS
GTTGCCGTTGCATAAATTGA+AGG 0.507915 4:+61830284 MsaT021018.1:CDS
GTCGGAGGGGAGAATTTCCA+TGG 0.508148 4:-61829926 None:intergenic
GTTAGAGAGGTTGCAGATGA+AGG 0.508168 4:+61830239 MsaT021018.1:CDS
AAACAAAGAGGCATTCAGAT+CGG 0.509562 4:+61834159 MsaT021018.1:CDS
AGGTGCCTCACCATGAGAAA+AGG 0.512326 4:-61833514 None:intergenic
CCTGGAAGTCATCAGGTAAA+CGG 0.512547 4:+61833712 MsaT021018.1:CDS
TTCACCAGATTGAATCATTG+TGG 0.512647 4:-61838488 None:intergenic
GGAATCATCGATCGGAGTGG+TGG 0.513887 4:-61829986 None:intergenic
CACCTTCTTCGATTCCGGTA+GGG 0.515819 4:-61830014 None:intergenic
GTGAAGTCATCCTGTTAGAC+AGG 0.516811 4:+61834372 MsaT021018.1:CDS
CAGTTTGATTCCGAAGTCGG+TGG 0.517323 4:+61830134 MsaT021018.1:CDS
GAAGTGACAAATACAAAGCT+TGG 0.518037 4:-61830394 None:intergenic
CCATATATTTCCACTATACA+GGG 0.519179 4:-61836869 None:intergenic
GCATGTAGAGGTGATCTTAG+TGG 0.520766 4:-61837296 None:intergenic
CGTGGGAACACCTCGGTGGA+TGG 0.522173 4:+61837361 MsaT021018.1:CDS
TGTGATAGGAAGAGAGATGA+TGG 0.522468 4:+61837233 MsaT021018.1:CDS
ACACCTTCTTCGATTCCGGT+AGG 0.525419 4:-61830015 None:intergenic
AAGTCAACCTATTATTTGAC+AGG 0.526361 4:-61831418 None:intergenic
GAAAGTTGCGAATAATAAGT+TGG 0.526712 4:+61831346 MsaT021018.1:CDS
TGACTGTAGATATCTTCCTC+CGG 0.527284 4:+61831223 MsaT021018.1:intron
TTCTGACAACTTCTCTAGAT+AGG 0.527799 4:-61837081 None:intergenic
GGTGTTCCCACGCACAAAGA+AGG 0.531621 4:-61837350 None:intergenic
GCAGATGAAGGTATCGTCAC+CGG 0.531718 4:+61830251 MsaT021018.1:CDS
CCTCCTCCTTCTTTGTGCGT+GGG 0.535678 4:+61837344 MsaT021018.1:CDS
TTAAATGGTTTAAACAAACC+TGG 0.536201 4:+61834631 MsaT021018.1:CDS
ACCATACCTGCAGACTATCA+TGG 0.538917 4:-61838304 None:intergenic
CCGTACTGAACAGAGCCAAT+TGG 0.539320 4:-61834940 None:intergenic
AAACCCTTCAATTTATGCAA+CGG 0.543522 4:-61830288 None:intergenic
AATAGCGGCGGTTTCCGGTG+GGG 0.545069 4:-61829953 None:intergenic
CTTGATAGTGAGGTCAAAGC+CGG 0.546797 4:-61831380 None:intergenic
GGAAAGGAATTATCAGGACT+GGG 0.546960 4:-61836519 None:intergenic
GGTGCGTACTTTGGAAGTAC+AGG 0.548062 4:+61836769 MsaT021018.1:intron
GTATCGTCACCGGGAATTGG+TGG 0.548770 4:+61830261 MsaT021018.1:CDS
GCCATTCTGCTATCTGCTCA+GGG 0.549712 4:+61834586 MsaT021018.1:CDS
AACCCTACCGGAATCGAAGA+AGG 0.550330 4:+61830012 MsaT021018.1:CDS
TGAGATTAACTTATTTGCGC+CGG 0.551213 4:+61830197 MsaT021018.1:CDS
AAAGAGCTTGAGCTTTCTAA+GGG 0.551657 4:+61830312 MsaT021018.1:CDS
TAGAGGTGCTATTATAGAAA+GGG 0.552194 4:+61834732 MsaT021018.1:CDS
CTCGTCATGTTCCCAAACTC+CGG 0.554978 4:-61830216 None:intergenic
TTGCCGTTGCATAAATTGAA+GGG 0.557233 4:+61830285 MsaT021018.1:CDS
TGTAATATGGAAGGAAATGA+TGG 0.557258 4:+61833411 MsaT021018.1:CDS
TTCAAAGAACTAATCTCTGA+AGG 0.559343 4:-61831308 None:intergenic
GGAAGAATGCTAGTTGAAAG+AGG 0.559676 4:-61836498 None:intergenic
CATCAGGTAAACGGTGGAAG+CGG 0.559694 4:+61833721 MsaT021018.1:CDS
GAAATCCATGAAATGCTGCT+TGG 0.560516 4:+61838613 MsaT021018.1:CDS
CTAACTAGCTCGCAAGGTAC+AGG 0.561580 4:-61835132 None:intergenic
TCTAGAAAACCGATTGGTGA+TGG 0.563245 4:+61834209 MsaT021018.1:CDS
CAGATGAAGGTATCGTCACC+GGG 0.564177 4:+61830252 MsaT021018.1:CDS
TCATCACAATTAGAGAGAGA+TGG 0.564212 4:-61836540 None:intergenic
TTTCTGGTTCAGAAATTCTG+TGG 0.566187 4:-61833857 None:intergenic
GCATCATCTGAAGAATTCTC+CGG 0.566501 4:-61830078 None:intergenic
TAAGTTGGTGGAGTTACCGC+CGG 0.566822 4:+61831361 MsaT021018.1:CDS
ACCTCGGTGGATGGCTCCAG+AGG 0.567188 4:+61837370 MsaT021018.1:CDS
TTTGACCTCACTATCAAGGT+TGG 0.568167 4:+61831385 MsaT021018.1:CDS
ATATACAACGCTAACTCCAC+AGG 0.568710 4:-61837122 None:intergenic
AATAATGAGCCATCACCAAT+CGG 0.568980 4:-61834218 None:intergenic
CTGTTCAGTACGGGGTCTGT+AGG 0.569511 4:+61834950 MsaT021018.1:CDS
GGTTTCCGGTGGGGTTTCGT+CGG 0.570036 4:-61829944 None:intergenic
GCAAGTTATCAACTTCATCC+TGG 0.570651 4:-61834657 None:intergenic
CTTTGTGCGTGGGAACACCT+CGG 0.570842 4:+61837354 MsaT021018.1:CDS
TTACAGTTTGATTCCGAAGT+CGG 0.571387 4:+61830131 MsaT021018.1:CDS
ATGGAAGGAAATGATGGTGA+TGG 0.574126 4:+61833417 MsaT021018.1:CDS
GATGATTCCCCAAACCCTAC+CGG 0.574690 4:+61830000 MsaT021018.1:CDS
ACAATTAGAGAGAGATGGAA+AGG 0.575155 4:-61836535 None:intergenic
AAGACACCGAATATTTCTGC+AGG 0.576402 4:+61835268 MsaT021018.1:CDS
CCCCTCCGACGAAACCCCAC+CGG 0.576871 4:+61829939 MsaT021018.1:CDS
AATCATCGATCGGAGTGGTG+GGG 0.580789 4:-61829984 None:intergenic
TAAATGGTTTAAACAAACCT+GGG 0.580803 4:+61834632 MsaT021018.1:CDS
TTTGTCTGTACATGTTCGAC+CGG 0.585419 4:+61834793 MsaT021018.1:CDS
CCCATTGTCTAAGGAGCATG+AGG 0.585844 4:-61834084 None:intergenic
ACACGTCCATGATAGTCTGC+AGG 0.585863 4:+61838298 MsaT021018.1:CDS
TGGATATGCTGTAATATGGA+AGG 0.587537 4:+61833402 MsaT021018.1:CDS
GGTGTTGTAGGTGCGTACTT+TGG 0.587946 4:+61836760 MsaT021018.1:intron
AAGCAATTTGCCGGAAAGTG+AGG 0.588042 4:+61833488 MsaT021018.1:CDS
CTTCTCTAATATCATACGGT+CGG 0.588545 4:-61835242 None:intergenic
ACAGAAACTGTCTCAGACAA+TGG 0.589068 4:+61833909 MsaT021018.1:CDS
AATAAAGAGGAGTGATACAT+GGG 0.592176 4:+61835197 MsaT021018.1:CDS
ATCAGTTGAGGCTGCTGTGA+AGG 0.593727 4:+61836608 MsaT021018.1:CDS
ACAGTATTTATGTGATCACA+TGG 0.594608 4:+61835104 MsaT021018.1:intron
GGAACATGACGAGGTTAGAG+AGG 0.595830 4:+61830226 MsaT021018.1:CDS
GGAATTTGGGTTCGACGAAG+AGG 0.596421 4:-61836477 None:intergenic
TTGATTCCGAAGTCGGTGGG+TGG 0.599870 4:+61830138 MsaT021018.1:CDS
AGCAGAAAGCTCGTCAAGAG+CGG 0.600768 4:+61833775 MsaT021018.1:CDS
AGTTTGATTCCGAAGTCGGT+GGG 0.601056 4:+61830135 MsaT021018.1:CDS
TTTATGGAATATGTGAAAGG+GGG 0.604311 4:+61836965 MsaT021018.1:CDS
TCTAGCTCATCAGTTAGTTG+TGG 0.605980 4:-61838442 None:intergenic
GGTTGAATAACAGCAGGAAG+TGG 0.607940 4:+61833796 MsaT021018.1:CDS
CCGGTGGGGTTTCGTCGGAG+GGG 0.608596 4:-61829939 None:intergenic
ATTGAGGACCATCTATCAGA+TGG 0.610301 4:+61834275 MsaT021018.1:CDS
AAGAGCGGTTGAATAACAGC+AGG 0.611135 4:+61833790 MsaT021018.1:CDS
TATCGTCACCGGGAATTGGT+GGG 0.615024 4:+61830262 MsaT021018.1:CDS
ATATTACAGCATATCCATGA+AGG 0.615260 4:-61833396 None:intergenic
AGTTGCGAATAATAAGTTGG+TGG 0.615889 4:+61831349 MsaT021018.1:CDS
AATTGGCTCTGTTCAGTACG+GGG 0.618154 4:+61834942 MsaT021018.1:CDS
CGGAGTTTGGGAACATGACG+AGG 0.618633 4:+61830217 MsaT021018.1:CDS
TGCAAGTCTAGAAAACCGAT+TGG 0.618653 4:+61834203 MsaT021018.1:CDS
GAATTCTTCAGATGATGCAG+TGG 0.626339 4:+61830083 MsaT021018.1:CDS
ATATGGACTATCTCAGCTGA+TGG 0.626899 4:+61836908 MsaT021018.1:CDS
GTCAAAATAGGAAAAGCAGA+AGG 0.627325 4:-61830345 None:intergenic
TGATAATATCGACAATGATG+AGG 0.632731 4:+61833992 MsaT021018.1:CDS
GCAATACAGCATGCATGTAG+AGG 0.633551 4:-61837308 None:intergenic
ACTCTCCAACCTTGATAGTG+AGG 0.636026 4:-61831390 None:intergenic
ACAACTAACTGATGAGCTAG+AGG 0.640084 4:+61838444 MsaT021018.1:CDS
TAACCCCTAACTAGCTCGCA+AGG 0.640861 4:-61835138 None:intergenic
AAATCACAGAGCTTCACAGT+GGG 0.643973 4:-61837260 None:intergenic
GCATGCTGTATTGCTCATGT+AGG 0.645157 4:+61837317 MsaT021018.1:CDS
GTTCCCACGCACAAAGAAGG+AGG 0.646977 4:-61837347 None:intergenic
CCCACGCACAAAGAAGGAGG+AGG 0.648018 4:-61837344 None:intergenic
GTACCTTGCGAGCTAGTTAG+GGG 0.648639 4:+61835135 MsaT021018.1:CDS
GTGCAAATATGGATCAGTTG+AGG 0.652715 4:+61836596 MsaT021018.1:CDS
GGGTTTGGGGAATCATCGAT+CGG 0.653677 4:-61829994 None:intergenic
TGGGGAATCATCGATCGGAG+TGG 0.655633 4:-61829989 None:intergenic
TCCCTGAGCAGATAGCAGAA+TGG 0.660194 4:-61834587 None:intergenic
ACTAGCTCGCAAGGTACAGG+TGG 0.663189 4:-61835129 None:intergenic
AAAATGATATTCCAGGCATG+TGG 0.666273 4:-61835174 None:intergenic
AATAACAGCAGGAAGTGGAA+AGG 0.667194 4:+61833801 MsaT021018.1:CDS
AAAACATCTACTGTTAGATG+AGG 0.669477 4:-61833685 None:intergenic
AATGGGCAAAGTGAACAGGA+TGG 0.677892 4:+61834101 MsaT021018.1:CDS
GGAAGTCATCAGGTAAACGG+TGG 0.680297 4:+61833715 MsaT021018.1:CDS
ACCTATGAAACAAATCAACA+AGG 0.683231 4:-61838552 None:intergenic
GATAGTGAGGTCAAAGCCGG+CGG 0.688135 4:-61831377 None:intergenic
TGATTTGTTTCATAGGTGCG+TGG 0.700976 4:+61838558 MsaT021018.1:CDS
ACCTCTGGAGCCATCCACCG+AGG 0.713982 4:-61837371 None:intergenic
CATATATTTCCACTATACAG+GGG 0.717541 4:-61836868 None:intergenic
TGGTGAAAAGCATGTTCCTG+TGG 0.718899 4:+61837106 MsaT021018.1:CDS
GTTAAGCACCCAATTTCCGG+AGG 0.722593 4:-61831239 None:intergenic
AAAATCACAGAGCTTCACAG+TGG 0.725075 4:-61837261 None:intergenic
TGTGCGTGGGAACACCTCGG+TGG 0.757904 4:+61837357 MsaT021018.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 61829928 61838678 61829928 ID=MsaG021018
Chr4 mRNA 61829928 61838678 61829928 ID=MsaT021018.1;Parent=MsaG021018
Chr4 exon 61829928 61830424 61829928 ID=MsaT021018.1.exon1;Parent=MsaT021018.1
Chr4 CDS 61829928 61830424 61829928 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61831232 61831496 61831232 ID=MsaT021018.1.exon2;Parent=MsaT021018.1
Chr4 CDS 61831232 61831496 61831232 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61833366 61833525 61833366 ID=MsaT021018.1.exon3;Parent=MsaT021018.1
Chr4 CDS 61833366 61833525 61833366 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61833649 61834393 61833649 ID=MsaT021018.1.exon4;Parent=MsaT021018.1
Chr4 CDS 61833649 61834393 61833649 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61834564 61834993 61834564 ID=MsaT021018.1.exon5;Parent=MsaT021018.1
Chr4 CDS 61834564 61834993 61834564 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61835108 61835289 61835108 ID=MsaT021018.1.exon6;Parent=MsaT021018.1
Chr4 CDS 61835108 61835289 61835108 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61836470 61836629 61836470 ID=MsaT021018.1.exon7;Parent=MsaT021018.1
Chr4 CDS 61836470 61836629 61836470 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61836770 61836997 61836770 ID=MsaT021018.1.exon8;Parent=MsaT021018.1
Chr4 CDS 61836770 61836997 61836770 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61837080 61837430 61837080 ID=MsaT021018.1.exon9;Parent=MsaT021018.1
Chr4 CDS 61837080 61837430 61837080 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61838218 61838319 61838218 ID=MsaT021018.1.exon10;Parent=MsaT021018.1
Chr4 CDS 61838218 61838319 61838218 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Chr4 exon 61838430 61838678 61838430 ID=MsaT021018.1.exon11;Parent=MsaT021018.1
Chr4 CDS 61838430 61838678 61838430 ID=cds.MsaT021018.1;Parent=MsaT021018.1
Gene Sequence

>MsaT021018.1

ATGGAAATTCTCCCCTCCGACGAAACCCCACCGGAAACCGCCGCTATTCCCGAAAACCCCACCACTCCGATCGATGATTCCCCAAACCCTACCGGAATCGAAGAAGGTGTAACCCTCGACGTATCGGGTAAAAATCTGGAACTTCCGGTACCGGAGAATTCTTCAGATGATGCAGTGGAGAGTTTGTATATGTACAAGAACGTTTACAGTTTGATTCCGAAGTCGGTGGGTGGTTTAATGCGTTTGAAAACGCTGAAATTCTTTGGAAATGAGATTAACTTATTTGCGCCGGAGTTTGGGAACATGACGAGGTTAGAGAGGTTGCAGATGAAGGTATCGTCACCGGGAATTGGTGGGTTGCCGTTGCATAAATTGAAGGGTTTGAAAGAGCTTGAGCTTTCTAAGGGTCCTTCTAGACCTTCTGCTTTTCCTATTTTGACTGAGATTGCTGCTCTCACGTGCTTGACCAAGCTTTGTATTTGTCACTTCAATATAAGATATCTTCCTCCGGAAATTGGGTGCTTAACGAATCTGGAATATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCTTCAGAGATTAGTTCTTTGAAAGCATTAATATCGATGAAAGTTGCGAATAATAAGTTGGTGGAGTTACCGCCGGCTTTGACCTCACTATCAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCGTTAGGATCACTTGAACTTAGCTCAATGCATAGACTTCAGAACTTAAGTCTTCAGCACAACAAGCTGCCCAGCATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGTGATGGATGCAAAGACAGTTATAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAATTTGCCGGAAAGTGAGGAAACCTTTTCTCATGGACCTGATACCATCTCTTCAAGCGTATTAACAAACTCCTCATCTAACAGTAGATGTTTTGCAGCCTGGAAGTCATCAGGTAAACGGTGGAAGCGGCGACACAGTAAACAGCATAAAACTCGTCAAGAGCAGAAAGCTCGTCAAGAGCGGTTGAATAACAGCAGGAAGTGGAAAGGTGTAGATCATGACCAGTTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAATCTGGATACTCTTGTCTCTGAAAACTGCACAGAAACTGTCTCAGACAATGGAAGCCTGGATGACAATCATAAAAAAATATTCTCGGAAGAAGCAGCTCAAAACAATTTAATTGATAATATCGACAATGATGAGGTAATCATTGAAAAACAATTTTCTCAAGAAGATTGCTGCACTGCAGAAAGTAAAGACGAACGAGATGCATCCTCATGCTCCTTAGACAATGGGCAAAGTGAACAGGATGGATCATCTTGTTCAGATTTTTCGAAGTGTAGTTTTAAAACAAAGAGGCATTCAGATCGGGATCTTGATAATCCTAAACCCTGCAAGTCTAGAAAACCGATTGGTGATGGCTCATTATTGTCTTCCAAGTACAGCAAAATTTCATTTTGTGGCATTGAGGACCATCTATCAGATGGCTTTTATGATGCGGGGCGTGATCGTCCGTTTATGCCTCTTGAGAATTACGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGACAAAGGGATGAAGAATTGGATGCCATTCTGCTATCTGCTCAGGGACTGGTCTCTAATTTGAAGCAGTTAAATGGTTTAAACAAACCTGGGAGCCAGGATGAAGTTGATAACTTGCAGACAGCATCACTGCTTGCACTCTTTGTATCTGATCATTTTGGCGGAAGTGATAGAGGTGCTATTATAGAAAGGGCACGCAAATCTGTTTCTGGCTCAAACTATAGTAAGCCTTTTGTCTGTACATGTTCGACCGGAAGCAGCACGAGTATAAATGCTGCAACTGAACCAGTTGTTAATGCCATAGAAGATATCAATCTTTCTATGGTCTCTGAAAAATCTCTTGATTCTATTAAAAAAAGGCGAAATTCAATCATTGTTCCAATTGGCTCTGTTCAGTACGGGGTCTGTAGGCACAGAGCTCTTCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTGTACCTTGCGAGCTAGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATCATTTTAATAAAGAGGAGTGATACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCGTATGATATTAGAGAAGAGAAAGACACCGAATATTTCTGCAGGTACATTCCTCTTCGTCGAACCCAAATTCCTCTTTCAACTAGCATTCTTCCCAGTCCTGATAATTCCTTTCCATCTCTCTCTAATTGTGATGAACTTGAGAAAAAAGCTTTAACTACATTAGTTCGGTGCAAATATGGATCAGTTGAGGCTGCTGTGAAGGTGCGTACTTTGGAAGTACAGGAAAATTCAGCAGACAAAATAAAAAACTTCGAATATAATTCTTTGGGAGAAATCAGAATTCTTGGTGCTTTTAAACACCCCTGTATAGTGGAAATATATGGACACCAAATATCATGCATATGGACTATCTCAGCTGATGGTAATCCGAAGCATCGAGTGTTGAGATCTGCAATTTTTATGGAATATGTGAAAGGGGGCTCCTTAAAAACCTATCTAGAGAAGTTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCGTTGTATATTGCCAAAGATGTCTCATGCGCTTTGTTGGAGCTGCATTCAAAGCACATAATTCACCGTGACATAAAAAGTGAAAACATTCTGTTCGATTGTGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGATCACCTCTACATGCATGCTGTATTGCTCATGTAGGAACACCTCCTCCTTCTTTGTGCGTGGGAACACCTCGGTGGATGGCTCCAGAGGTCATGCGAACTATGTACAAGAAAAACACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTCTGGAGATGCTAACTTTGCAAATTCCATATTTTGGAGTACCTGATTCACACGTCCATGATAGTCTGCAGATGGGTAAACGACCACAACTAACTGATGAGCTAGAGGCATTGAGCTCAATGAATGAACCCACAATGATTCAATCTGGTGAAGAGCTGGAAAAATCAGATGCTGAGGCAGATACATTGAAGTTCCTTGTTGATTTGTTTCATAGGTGCGTGGAAGAAAATCCAAATGAACGACCTACAGCTGAAGAAATCCATGAAATGCTGCTTGGACACACAAGTCGCATACAAGTTCAAAATGTTAGTGAGATTTAG
Protein sequence

>MsaT021018.1

MEILPSDETPPETAAIPENPTTPIDDSPNPTGIEEGVTLDVSGKNLELPVPENSSDDAVESLYMYKNVYSLIPKSVGGLMRLKTLKFFGNEINLFAPEFGNMTRLERLQMKVSSPGIGGLPLHKLKGLKELELSKGPSRPSAFPILTEIAALTCLTKLCICHFNIRYLPPEIGCLTNLEYLDLSFNKMKTLPSEISSLKALISMKVANNKLVELPPALTSLSRLESLDLSNNRLTSLGSLELSSMHRLQNLSLQHNKLPSIFQIPSWICCNMEGNDGDGCKDSYSSSSVEMDVYESNLPESEETFSHGPDTISSSVLTNSSSNSRCFAAWKSSGKRWKRRHSKQHKTRQEQKARQERLNNSRKWKGVDHDQLLSKKIHRISEPENLDTLVSENCTETVSDNGSLDDNHKKIFSEEAAQNNLIDNIDNDEVIIEKQFSQEDCCTAESKDERDASSCSLDNGQSEQDGSSCSDFSKCSFKTKRHSDRDLDNPKPCKSRKPIGDGSLLSSKYSKISFCGIEDHLSDGFYDAGRDRPFMPLENYEQNQCLASREVILLDRQRDEELDAILLSAQGLVSNLKQLNGLNKPGSQDEVDNLQTASLLALFVSDHFGGSDRGAIIERARKSVSGSNYSKPFVCTCSTGSSTSINAATEPVVNAIEDINLSMVSEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKRSDTWVRMLVDACRPYDIREEKDTEYFCRYIPLRRTQIPLSTSILPSPDNSFPSLSNCDELEKKALTTLVRCKYGSVEAAVKVRTLEVQENSADKIKNFEYNSLGEIRILGAFKHPCIVEIYGHQISCIWTISADGNPKHRVLRSAIFMEYVKGGSLKTYLEKLSEAGEKHVPVELALYIAKDVSCALLELHSKHIIHRDIKSENILFDCDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPSLCVGTPRWMAPEVMRTMYKKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHVHDSLQMGKRPQLTDELEALSSMNEPTMIQSGEELEKSDAEADTLKFLVDLFHRCVEENPNERPTAEEIHEMLLGHTSRIQVQNVSEI*