AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG021290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG021290 MtrunA17_Chr4g0037141 98.258 287 1 2 1 285 1 285 0.0 580
MsaG021290 MtrunA17_Chr3g0131121 48.973 292 125 4 1 269 1 291 1.11e-87 263
MsaG021290 MtrunA17_Chr8g0385321 83.721 129 21 0 1 129 1 129 1.78e-79 243
MsaG021290 MtrunA17_Chr5g0435101 72.800 125 34 0 3 127 2 126 9.27e-69 212
MsaG021290 MtrunA17_Chr2g0281071 72.868 129 34 1 1 128 1 129 7.15e-66 209
MsaG021290 MtrunA17_Chr2g0323411 72.656 128 35 0 1 128 1 128 1.38e-65 207
MsaG021290 MtrunA17_Chr7g0217741 58.750 160 64 1 1 158 1 160 1.77e-65 207
MsaG021290 MtrunA17_Chr4g0048511 72.093 129 35 1 1 128 1 129 3.58e-65 207
MsaG021290 MtrunA17_Chr4g0044421 72.000 125 34 1 3 126 2 126 8.00e-65 201
MsaG021290 MtrunA17_Chr4g0039971 67.969 128 41 0 1 128 2 129 1.21e-64 206
MsaG021290 MtrunA17_Chr5g0410961 64.189 148 51 1 1 148 1 146 1.68e-64 206
MsaG021290 MtrunA17_Chr7g0270891 53.039 181 80 1 1 176 1 181 2.35e-64 206
MsaG021290 MtrunA17_Chr3g0115821 65.625 128 44 0 1 128 1 128 2.76e-63 202
MsaG021290 MtrunA17_Chr7g0275911 73.950 119 31 0 1 119 1 119 2.93e-63 199
MsaG021290 MtrunA17_Chr6g0453471 55.215 163 68 1 1 158 1 163 8.34e-63 201
MsaG021290 MtrunA17_Chr4g0057031 67.176 131 43 0 1 131 1 131 8.70e-63 199
MsaG021290 MtrunA17_Chr8g0346561 75.000 116 29 0 1 116 1 116 1.56e-62 199
MsaG021290 MtrunA17_Chr1g0193371 49.231 195 97 1 1 193 1 195 2.14e-62 201
MsaG021290 MtrunA17_Chr5g0434571 57.576 165 60 3 1 156 37 200 2.48e-62 200
MsaG021290 MtrunA17_Chr4g0042671 52.151 186 84 1 1 181 1 186 4.58e-62 201
MsaG021290 MtrunA17_Chr3g0121241 68.000 125 40 0 5 129 35 159 8.29e-62 197
MsaG021290 MtrunA17_Chr8g0349261 51.323 189 87 3 1 184 1 189 2.06e-61 196
MsaG021290 MtrunA17_Chr4g0058631 53.012 166 66 1 1 166 1 154 1.07e-60 196
MsaG021290 MtrunA17_Chr1g0193801 62.879 132 49 0 1 132 1 132 3.14e-60 196
MsaG021290 MtrunA17_Chr3g0110351 61.151 139 54 0 1 139 1 139 4.22e-60 193
MsaG021290 MtrunA17_Chr4g0068061 63.830 141 45 1 1 135 1 141 5.51e-60 194
MsaG021290 MtrunA17_Chr1g0211161 63.780 127 46 0 3 129 4 130 3.38e-59 188
MsaG021290 MtrunA17_Chr3g0117091 62.791 129 48 0 1 129 1 129 6.59e-59 191
MsaG021290 MtrunA17_Chr1g0187761 61.111 144 55 1 1 144 1 143 7.06e-59 188
MsaG021290 MtrunA17_Chr6g0452271 60.606 132 52 0 1 132 1 132 9.16e-59 191
MsaG021290 MtrunA17_Chr4g0070611 71.552 116 33 0 1 116 1 116 9.66e-59 189
MsaG021290 MtrunA17_Chr4g0070641 71.552 116 33 0 1 116 1 116 1.05e-58 185
MsaG021290 MtrunA17_Chr3g0103281 61.364 132 51 0 1 132 1 132 1.20e-58 190
MsaG021290 MtrunA17_Chr7g0228891 50.867 173 80 1 1 168 1 173 1.64e-58 188
MsaG021290 MtrunA17_Chr5g0395281 62.500 128 48 0 1 128 1 128 8.18e-58 187
MsaG021290 MtrunA17_Chr1g0167661 68.644 118 37 0 1 118 1 118 2.32e-57 184
MsaG021290 MtrunA17_Chr1g0203411 67.241 116 38 0 1 116 1 116 2.72e-57 186
MsaG021290 MtrunA17_Chr7g0271241 64.885 131 46 0 1 131 1 131 4.11e-57 187
MsaG021290 MtrunA17_Chr1g0167691 69.231 117 36 0 1 117 1 117 7.74e-57 183
MsaG021290 MtrunA17_Chr7g0274581 65.517 116 40 0 1 116 1 116 2.66e-56 180
MsaG021290 MtrunA17_Chr2g0309911 60.305 131 49 1 6 136 5 132 3.60e-55 181
MsaG021290 MtrunA17_Chr7g0261281 67.241 116 38 0 1 116 1 116 8.23e-55 179
MsaG021290 MtrunA17_Chr8g0342521 60.484 124 49 0 1 124 1 124 1.03e-53 178
MsaG021290 MtrunA17_Chr1g0194951 62.500 128 48 0 1 128 1 128 1.46e-53 178
MsaG021290 MtrunA17_Chr2g0330041 60.000 125 50 0 1 125 1 125 2.18e-53 178
MsaG021290 MtrunA17_Chr7g0269831 63.910 133 47 1 1 132 1 133 7.23e-53 176
MsaG021290 MtrunA17_Chr8g0342541 59.677 124 50 0 1 124 1 124 8.54e-53 176
MsaG021290 MtrunA17_Chr4g0060721 49.432 176 80 4 1 170 2 174 1.03e-52 175
MsaG021290 MtrunA17_Chr8g0387421 48.837 172 82 2 1 166 1 172 2.36e-52 173
MsaG021290 MtrunA17_Chr3g0135311 61.667 120 45 1 1 119 1 120 5.02e-52 173
MsaG021290 MtrunA17_Chr1g0151941 48.276 174 85 3 1 173 1 170 9.24e-52 170
MsaG021290 MtrunA17_Chr7g0217221 62.931 116 43 0 1 116 1 116 1.09e-51 170
MsaG021290 MtrunA17_Chr3g0092401 63.793 116 42 0 1 116 2 117 1.50e-51 171
MsaG021290 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 1.98e-51 171
MsaG021290 MtrunA17_Chr7g0254411 61.111 126 47 1 1 124 1 126 2.71e-51 171
MsaG021290 MtrunA17_Chr5g0400821 47.561 164 80 2 1 163 1 159 8.10e-51 169
MsaG021290 MtrunA17_Chr4g0022881 63.158 114 42 0 1 114 1 114 1.74e-50 166
MsaG021290 MtrunA17_Chr1g0152011 60.833 120 46 1 1 119 1 120 1.94e-50 169
MsaG021290 MtrunA17_Chr4g0022891 64.602 113 40 0 1 113 1 113 2.94e-50 166
MsaG021290 MtrunA17_Chr5g0417821 51.613 155 73 1 14 168 9 161 3.53e-50 167
MsaG021290 MtrunA17_Chr4g0022931 61.538 117 44 1 1 116 1 117 7.15e-50 166
MsaG021290 MtrunA17_Chr2g0323351 62.393 117 44 0 1 117 1 117 9.74e-50 164
MsaG021290 MtrunA17_Chr8g0342481 57.600 125 52 1 1 124 1 125 1.00e-49 169
MsaG021290 MtrunA17_Chr4g0022901 59.664 119 47 1 1 118 1 119 6.32e-49 163
MsaG021290 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 6.71e-49 165
MsaG021290 MtrunA17_Chr4g0022911 58.824 119 48 1 1 118 1 119 9.79e-49 163
MsaG021290 MtrunA17_Chr4g0032401 48.214 168 79 2 14 173 19 186 1.34e-48 164
MsaG021290 MtrunA17_Chr4g0028311 58.475 118 48 1 1 117 1 118 3.87e-48 162
MsaG021290 MtrunA17_Chr6g0453211 62.162 111 42 0 1 111 1 111 4.99e-48 162
MsaG021290 MtrunA17_Chr7g0264641 56.780 118 50 1 1 117 1 118 6.02e-48 160
MsaG021290 MtrunA17_Chr2g0328771 65.714 105 36 0 14 118 22 126 8.37e-48 162
MsaG021290 MtrunA17_Chr4g0055981 64.486 107 38 0 9 115 52 158 1.44e-47 158
MsaG021290 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 1.66e-47 161
MsaG021290 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 9.14e-47 158
MsaG021290 MtrunA17_Chr8g0343831 61.207 116 41 1 1 116 1 112 1.35e-46 157
MsaG021290 MtrunA17_Chr3g0088461 62.037 108 41 0 9 116 19 126 4.25e-46 158
MsaG021290 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 2.01e-45 156
MsaG021290 MtrunA17_Chr7g0240821 67.327 101 33 0 16 116 5 105 6.79e-45 151
MsaG021290 MtrunA17_Chr1g0203441 37.500 256 151 6 1 255 1 248 1.08e-44 152
MsaG021290 MtrunA17_Chr6g0487491 44.828 174 82 4 1 163 1 171 2.62e-44 151
MsaG021290 MtrunA17_Chr6g0450101 44.828 174 80 3 1 171 1 161 3.36e-44 149
MsaG021290 MtrunA17_Chr7g0228231 44.944 178 83 2 14 189 16 180 8.05e-44 148
MsaG021290 MtrunA17_Chr6g0470971 52.713 129 60 1 7 135 9 136 2.17e-43 149
MsaG021290 MtrunA17_Chr1g0186061 59.091 110 45 0 6 115 14 123 7.23e-43 147
MsaG021290 MtrunA17_Chr1g0209661 55.200 125 56 0 8 132 23 147 1.58e-42 148
MsaG021290 MtrunA17_Chr7g0220341 47.170 159 71 4 14 161 27 183 1.64e-42 147
MsaG021290 MtrunA17_Chr8g0354661 63.725 102 37 0 14 115 39 140 1.72e-42 152
MsaG021290 MtrunA17_Chr1g0168661 62.857 105 39 0 14 118 23 127 1.73e-42 146
MsaG021290 MtrunA17_Chr7g0247131 54.545 121 52 1 44 161 10 130 2.35e-42 146
MsaG021290 MtrunA17_Chr5g0434931 58.333 108 45 0 14 121 37 144 4.32e-42 146
MsaG021290 MtrunA17_Chr5g0434911 55.752 113 50 0 7 119 16 128 9.69e-42 145
MsaG021290 MtrunA17_Chr3g0099131 60.377 106 42 0 10 115 39 144 7.86e-41 148
MsaG021290 MtrunA17_Chr3g0080861 60.784 102 40 0 14 115 39 140 1.95e-40 147
MsaG021290 MtrunA17_Chr7g0228991 59.434 106 43 0 14 119 31 136 3.04e-40 141
MsaG021290 MtrunA17_Chr1g0180391 62.136 103 39 0 14 116 21 123 3.12e-40 139
MsaG021290 MtrunA17_Chr1g0194291 63.725 102 37 0 14 115 23 124 4.33e-40 140
MsaG021290 MtrunA17_Chr5g0434831 58.491 106 44 0 14 119 9 114 4.48e-40 138
MsaG021290 MtrunA17_Chr5g0434841 59.434 106 43 0 14 119 22 127 1.17e-39 140
MsaG021290 MtrunA17_Chr2g0294811 64.130 92 33 0 1 92 1 92 3.91e-39 133
MsaG021290 MtrunA17_Chr1g0194301 58.824 102 42 0 14 115 35 136 5.65e-39 137
MsaG021290 MtrunA17_Chr8g0360111 60.606 99 39 0 14 112 27 125 7.49e-39 137
MsaG021290 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 2.48e-38 130
MsaG021290 MtrunA17_Chr2g0327821 46.667 135 67 2 14 145 8 140 6.86e-38 134
MsaG021290 MtrunA17_Chr1g0154031 56.863 102 44 0 14 115 78 179 3.82e-37 136
MsaG021290 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 7.00e-37 126
MsaG021290 MtrunA17_Chr1g0192411 51.261 119 52 1 14 126 14 132 1.75e-36 134
MsaG021290 MtrunA17_Chr2g0322521 61.765 102 39 0 14 115 31 132 2.85e-36 133
MsaG021290 MtrunA17_Chr8g0342531 49.138 116 54 1 1 111 1 116 3.46e-36 127
MsaG021290 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 1.07e-35 125
MsaG021290 MtrunA17_Chr4g0030881 53.153 111 45 1 12 115 7 117 1.25e-35 128
MsaG021290 MtrunA17_Chr2g0293911 63.366 101 37 0 14 114 26 126 1.66e-35 130
MsaG021290 MtrunA17_Chr4g0068921 61.386 101 39 0 14 114 26 126 1.87e-35 126
MsaG021290 MtrunA17_Chr5g0440781 40.909 154 85 3 12 164 12 160 2.34e-35 125
MsaG021290 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 3.53e-35 124
MsaG021290 MtrunA17_Chr5g0440761 40.909 154 85 3 12 164 12 160 1.63e-34 125
MsaG021290 MtrunA17_Chr5g0441141 40.909 154 85 3 12 164 12 160 2.03e-34 125
MsaG021290 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 2.10e-34 120
MsaG021290 MtrunA17_Chr5g0395221 60.227 88 35 0 1 88 1 88 5.13e-33 116
MsaG021290 MtrunA17_Chr7g0229101 68.571 70 22 0 44 113 4 73 2.26e-30 113
MsaG021290 MtrunA17_Chr8g0334881 47.222 108 56 1 8 114 6 113 5.48e-30 115
MsaG021290 MtrunA17_Chr5g0441131 49.038 104 52 1 12 114 9 112 9.76e-30 110
MsaG021290 MtrunA17_Chr4g0013361 39.716 141 81 3 8 147 6 143 2.91e-29 112
MsaG021290 MtrunA17_Chr7g0229131 45.192 104 57 0 44 147 4 107 1.96e-28 107
MsaG021290 MtrunA17_Chr3g0099141 52.874 87 41 0 8 94 36 122 2.21e-28 106
MsaG021290 MtrunA17_Chr3g0093811 38.129 139 82 1 44 178 14 152 6.43e-28 108
MsaG021290 MtrunA17_Chr5g0434901 66.667 66 22 0 48 113 9 74 2.48e-27 102
MsaG021290 MtrunA17_Chr5g0401731 46.552 116 61 1 14 129 15 129 2.53e-27 108
MsaG021290 MtrunA17_Chr7g0238631 38.037 163 87 4 14 167 113 270 2.73e-27 110
MsaG021290 MtrunA17_Chr5g0429661 37.107 159 89 4 14 169 122 272 5.52e-27 107
MsaG021290 MtrunA17_Chr6g0454921 50.000 102 50 1 14 115 15 115 8.16e-27 103
MsaG021290 MtrunA17_Chr4g0008551 49.123 114 51 3 14 126 38 145 1.59e-26 106
MsaG021290 MtrunA17_Chr3g0117511 47.500 120 58 3 3 119 170 287 1.50e-25 105
MsaG021290 MtrunA17_Chr4g0058991 48.598 107 52 2 14 119 209 313 1.99e-25 104
MsaG021290 MtrunA17_Chr4g0053431 37.278 169 99 2 14 176 5 172 3.64e-25 101
MsaG021290 MtrunA17_Chr5g0425591 50.602 83 40 1 12 93 9 91 5.28e-24 93.2
MsaG021290 MtrunA17_Chr7g0228531 49.091 110 51 3 14 120 220 327 7.93e-24 100
MsaG021290 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 2.19e-23 95.5
MsaG021290 MtrunA17_Chr6g0480581 44.118 102 54 2 14 114 4 103 3.52e-23 95.1
MsaG021290 MtrunA17_Chr1g0157731 42.718 103 58 1 14 116 91 192 4.15e-23 99.0
MsaG021290 MtrunA17_Chr5g0437321 44.340 106 56 2 8 112 13 116 7.57e-23 95.5
MsaG021290 MtrunA17_Chr5g0417621 42.241 116 59 3 2 116 127 235 1.71e-22 96.3
MsaG021290 MtrunA17_Chr3g0139671 40.385 104 59 2 14 116 85 186 5.79e-22 95.9
MsaG021290 MtrunA17_Chr4g0042501 40.870 115 60 3 2 115 98 205 7.64e-22 94.4
MsaG021290 MtrunA17_Chr5g0397841 47.917 96 49 1 14 109 110 204 1.02e-21 94.4
MsaG021290 MtrunA17_Chr5g0397841 33.621 116 70 3 4 112 41 156 6.68e-12 65.5
MsaG021290 MtrunA17_Chr7g0228401 45.192 104 49 3 25 128 290 385 8.58e-21 92.0
MsaG021290 MtrunA17_Chr6g0460661 40.816 98 57 1 13 110 15 111 1.00e-20 86.7
MsaG021290 MtrunA17_Chr1g0177901 46.067 89 47 1 25 113 5 92 2.38e-20 87.0
MsaG021290 MtrunA17_Chr3g0145551 69.231 52 16 0 91 142 1 52 3.48e-20 82.8
MsaG021290 MtrunA17_Chr6g0453751 46.067 89 39 2 14 93 22 110 5.28e-20 84.0
MsaG021290 MtrunA17_Chr3g0125801 46.602 103 52 2 14 115 16 116 8.18e-20 87.0
MsaG021290 MtrunA17_Chr7g0233061 41.509 106 55 2 10 113 176 276 2.37e-19 86.7
MsaG021290 MtrunA17_Chr7g0238651 31.818 154 92 3 17 162 10 158 4.06e-19 86.3
MsaG021290 MtrunA17_Chr7g0228481 42.727 110 58 3 14 120 220 327 4.62e-19 86.7
MsaG021290 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 9.11e-19 85.1
MsaG021290 MtrunA17_Chr7g0254261 38.793 116 63 3 1 115 81 189 1.77e-17 81.3
MsaG021290 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 6.43e-16 77.4
MsaG021290 MtrunA17_Chr5g0434871 60.000 45 18 0 74 118 2 46 1.62e-15 70.1
MsaG021290 MtrunA17_Chr8g0362231 35.714 112 70 2 16 127 24 133 4.58e-15 74.7
MsaG021290 MtrunA17_Chr1g0193901 53.846 52 24 0 17 68 17 68 1.14e-14 68.9
MsaG021290 MtrunA17_Chr1g0193891 53.846 52 24 0 17 68 17 68 1.14e-14 68.9
MsaG021290 MtrunA17_Chr1g0193871 53.846 52 24 0 17 68 17 68 1.14e-14 68.9
MsaG021290 MtrunA17_Chr1g0193881 53.846 52 24 0 17 68 17 68 1.14e-14 68.9
MsaG021290 MtrunA17_Chr5g0395231 52.941 51 24 0 78 128 5 55 3.29e-14 70.9
MsaG021290 MtrunA17_Chr4g0042621 58.491 53 22 0 88 140 14 66 9.21e-14 70.5
MsaG021290 MtrunA17_Chr2g0322831 61.538 39 15 0 70 108 34 72 3.04e-13 63.9
MsaG021290 MtrunA17_Chr5g0434891 59.091 44 18 0 77 120 1 44 6.24e-13 65.1
MsaG021290 MtrunA17_Chr7g0247141 54.167 48 21 1 1 47 1 48 1.06e-12 62.0
MsaG021290 MtrunA17_Chr7g0233151 50.847 59 26 1 65 120 1 59 1.22e-12 64.7
MsaG021290 MtrunA17_Chr4g0024181 58.537 41 17 0 70 110 28 68 3.50e-12 60.8
MsaG021290 MtrunA17_Chr3g0104491 38.806 67 37 1 53 115 1 67 1.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG021290 AT4G38620.1 59.259 297 94 9 1 285 1 282 4.88e-111 322
MsaG021290 AT4G34990.1 55.405 296 99 7 1 285 1 274 1.43e-101 298
MsaG021290 AT2G16720.1 51.525 295 107 5 1 285 1 269 7.92e-97 286
MsaG021290 AT4G09460.1 61.111 216 68 4 1 213 1 203 3.78e-87 260
MsaG021290 AT1G22640.1 54.545 264 85 4 1 247 1 246 1.81e-86 259
MsaG021290 AT1G35515.1 60.804 199 77 1 1 198 1 199 3.96e-83 249
MsaG021290 AT5G16770.4 75.781 128 31 0 1 128 1 128 9.63e-71 221
MsaG021290 AT5G16770.3 75.781 128 31 0 1 128 1 128 9.63e-71 221
MsaG021290 AT5G16770.1 75.781 128 31 0 1 128 1 128 2.09e-70 221
MsaG021290 AT5G16770.2 75.781 128 31 0 1 128 1 128 2.09e-70 221
MsaG021290 AT3G02940.2 75.000 128 32 0 1 128 1 128 1.66e-69 218
MsaG021290 AT3G02940.1 75.000 128 32 0 1 128 1 128 3.50e-69 217
MsaG021290 AT3G02940.3 75.000 128 32 0 1 128 1 128 3.50e-69 217
MsaG021290 AT4G28110.1 71.875 128 36 0 1 128 1 128 3.55e-67 211
MsaG021290 AT4G21440.1 72.656 128 35 0 1 128 1 128 3.84e-67 213
MsaG021290 AT4G05100.1 72.868 129 34 1 1 128 1 129 4.58e-66 209
MsaG021290 AT3G13540.1 69.291 127 39 0 4 130 15 141 2.76e-64 202
MsaG021290 AT3G61250.1 47.959 196 97 2 1 195 1 192 5.26e-64 203
MsaG021290 AT5G15310.4 52.128 188 89 1 1 188 1 187 1.09e-63 201
MsaG021290 AT3G01140.2 59.006 161 63 2 1 158 1 161 1.55e-63 203
MsaG021290 AT4G12350.1 67.424 132 43 0 1 132 1 132 1.74e-63 201
MsaG021290 AT5G15310.2 52.128 188 89 1 1 188 1 187 2.38e-63 202
MsaG021290 AT5G15310.1 52.128 188 89 1 1 188 1 187 2.83e-63 202
MsaG021290 AT1G57560.2 62.500 144 54 0 1 144 1 144 4.22e-63 200
MsaG021290 AT5G07690.1 63.121 141 52 0 1 141 1 141 7.13e-63 201
MsaG021290 AT1G57560.1 65.909 132 45 0 1 132 1 132 8.26e-63 201
MsaG021290 AT4G22680.1 67.939 131 42 0 1 131 1 131 1.51e-62 198
MsaG021290 AT5G61420.2 50.276 181 87 1 1 181 1 178 1.96e-62 201
MsaG021290 AT1G09540.1 65.909 132 45 0 1 132 1 132 4.29e-62 200
MsaG021290 AT4G17785.2 62.000 150 55 2 1 148 1 150 8.05e-62 199
MsaG021290 AT4G17785.1 62.000 150 55 2 1 148 1 150 9.02e-62 199
MsaG021290 AT5G26660.1 56.707 164 60 2 1 162 1 155 1.13e-61 199
MsaG021290 AT5G10280.1 57.143 147 63 0 1 147 1 147 1.99e-61 197
MsaG021290 AT5G60890.1 62.222 135 51 0 1 135 1 135 2.28e-61 196
MsaG021290 AT1G34670.1 63.043 138 51 0 1 138 1 138 5.10e-61 197
MsaG021290 AT5G16600.1 62.069 145 54 1 1 144 1 145 1.09e-60 196
MsaG021290 AT5G14340.1 59.859 142 57 0 1 142 13 154 1.48e-60 194
MsaG021290 AT3G01140.1 56.962 158 65 1 4 158 47 204 2.18e-60 196
MsaG021290 AT1G66230.1 61.594 138 53 0 1 138 1 138 2.98e-60 193
MsaG021290 AT5G65230.1 64.062 128 46 0 1 128 1 128 3.30e-60 194
MsaG021290 AT4G01680.3 63.636 132 48 0 1 132 1 132 1.43e-59 190
MsaG021290 AT5G56110.1 62.879 132 49 0 1 132 1 132 1.77e-59 192
MsaG021290 AT1G18570.1 58.553 152 61 2 1 150 1 152 4.45e-59 192
MsaG021290 AT4G01680.1 63.636 132 48 0 1 132 1 132 7.63e-59 191
MsaG021290 AT5G62320.1 53.179 173 65 3 2 162 3 171 9.54e-59 188
MsaG021290 AT2G47460.1 64.748 139 49 0 1 139 1 139 1.25e-58 191
MsaG021290 AT5G07700.1 51.765 170 78 1 1 170 1 166 1.57e-58 190
MsaG021290 AT5G07700.2 51.765 170 78 1 1 170 1 166 1.57e-58 190
MsaG021290 AT5G54230.1 67.969 128 41 0 1 128 1 128 2.38e-58 189
MsaG021290 AT5G49330.1 73.276 116 31 0 1 116 1 116 2.62e-58 190
MsaG021290 AT1G74080.1 62.791 129 48 0 1 129 1 129 5.97e-58 189
MsaG021290 AT3G23250.1 46.766 201 103 3 1 200 1 198 6.34e-57 184
MsaG021290 AT2G31180.1 59.859 142 54 1 1 139 1 142 3.24e-56 181
MsaG021290 AT4G01680.2 58.333 144 48 1 1 132 1 144 2.45e-55 182
MsaG021290 AT3G62610.1 70.690 116 34 0 1 116 1 116 3.64e-55 182
MsaG021290 AT1G06180.1 68.966 116 36 0 1 116 1 116 5.96e-55 178
MsaG021290 AT1G79180.1 68.696 115 36 0 2 116 4 118 1.61e-54 179
MsaG021290 AT3G12720.1 61.983 121 46 0 6 126 16 136 1.69e-54 179
MsaG021290 AT1G16490.1 56.376 149 61 2 2 146 4 152 3.58e-54 177
MsaG021290 AT1G74650.1 64.957 117 41 0 1 117 1 117 2.81e-53 176
MsaG021290 AT3G13890.2 63.248 117 43 0 1 117 1 117 4.20e-53 177
MsaG021290 AT3G28470.1 56.818 132 57 0 1 132 1 132 4.81e-53 176
MsaG021290 AT1G56160.1 65.217 115 40 0 2 116 4 118 2.34e-52 173
MsaG021290 AT3G47600.1 54.305 151 59 1 1 141 1 151 2.61e-52 174
MsaG021290 AT5G62470.2 57.857 140 57 1 1 140 1 138 4.05e-52 174
MsaG021290 AT1G08810.1 65.517 116 40 0 1 116 1 116 1.34e-51 171
MsaG021290 AT3G12820.1 64.103 117 42 0 3 119 5 121 1.57e-51 169
MsaG021290 AT5G62470.1 57.857 140 56 2 1 140 1 137 9.50e-51 171
MsaG021290 AT1G74430.1 57.143 133 57 0 1 133 1 133 1.13e-50 168
MsaG021290 AT3G28910.1 62.069 116 44 0 1 116 1 116 2.63e-50 169
MsaG021290 AT4G37780.1 42.254 213 96 5 1 187 1 212 3.96e-50 167
MsaG021290 AT3G13890.1 58.730 126 43 1 1 117 1 126 5.41e-50 169
MsaG021290 AT1G63910.1 56.250 128 56 0 1 128 1 128 9.88e-50 168
MsaG021290 AT5G14750.1 66.990 103 34 0 14 116 18 120 3.27e-49 162
MsaG021290 AT5G57620.1 59.167 120 48 1 1 119 1 120 4.21e-49 166
MsaG021290 AT5G65790.1 59.167 120 48 1 1 119 1 120 9.08e-49 166
MsaG021290 AT3G49690.1 58.333 120 49 1 1 119 1 120 1.74e-48 164
MsaG021290 AT5G23000.1 59.322 118 47 1 1 117 1 118 3.19e-48 163
MsaG021290 AT5G40330.1 65.049 103 36 0 14 116 14 116 6.41e-48 159
MsaG021290 AT5G35550.1 69.231 104 32 0 13 116 15 118 8.24e-48 160
MsaG021290 AT1G79180.2 53.378 148 36 1 2 116 4 151 9.30e-48 162
MsaG021290 AT1G18710.1 54.264 129 59 0 1 129 1 129 1.34e-47 160
MsaG021290 AT3G01530.1 50.943 159 73 1 8 166 21 174 3.01e-47 157
MsaG021290 AT5G12870.1 65.049 103 36 0 14 116 20 122 3.07e-47 159
MsaG021290 AT2G36890.1 55.118 127 56 1 1 126 1 127 9.88e-47 159
MsaG021290 AT2G36890.2 55.118 127 56 1 1 126 42 168 1.77e-46 159
MsaG021290 AT3G27920.1 60.000 110 44 0 8 117 10 119 2.75e-46 155
MsaG021290 AT3G08500.1 62.037 108 41 0 9 116 27 134 3.68e-46 158
MsaG021290 AT5G52600.1 45.181 166 80 2 9 163 9 174 2.08e-45 152
MsaG021290 AT1G22640.3 45.894 207 77 4 58 247 1 189 1.66e-44 150
MsaG021290 AT5G40350.1 43.605 172 93 1 10 181 15 182 3.68e-44 149
MsaG021290 AT3G27810.1 46.707 167 86 1 9 175 17 180 1.01e-43 149
MsaG021290 AT4G13480.1 65.686 102 35 0 14 115 8 109 1.39e-42 147
MsaG021290 AT3G30210.1 43.333 180 87 2 14 178 29 208 4.86e-42 146
MsaG021290 AT2G26960.1 44.048 168 79 2 9 161 17 184 5.20e-42 149
MsaG021290 AT2G32460.2 62.745 102 38 0 14 115 8 109 5.51e-42 150
MsaG021290 AT4G26930.1 49.660 147 67 2 14 160 21 160 5.70e-42 149
MsaG021290 AT2G32460.1 62.745 102 38 0 14 115 20 121 5.91e-42 150
MsaG021290 AT5G55020.1 61.111 108 41 1 14 121 28 134 8.52e-42 150
MsaG021290 AT5G06100.1 59.804 102 41 0 14 115 34 135 1.67e-41 149
MsaG021290 AT3G24310.1 63.725 102 37 0 14 115 20 121 3.08e-41 144
MsaG021290 AT4G25560.1 61.538 104 40 0 14 117 12 115 3.51e-41 144
MsaG021290 AT5G26660.2 57.500 120 40 2 45 162 14 124 5.19e-41 144
MsaG021290 AT5G06100.5 59.804 102 41 0 14 115 34 135 7.34e-41 148
MsaG021290 AT5G06100.2 59.804 102 41 0 14 115 34 135 7.34e-41 148
MsaG021290 AT5G06100.3 59.804 102 41 0 14 115 34 135 7.34e-41 148
MsaG021290 AT5G06100.4 59.804 102 41 0 14 115 34 135 7.34e-41 148
MsaG021290 AT3G11440.2 59.804 102 41 0 14 115 43 144 8.03e-41 147
MsaG021290 AT1G25340.1 53.600 125 58 0 8 132 14 138 1.84e-40 142
MsaG021290 AT2G47190.1 56.481 108 47 0 8 115 16 123 2.50e-40 141
MsaG021290 AT3G11440.3 59.804 102 41 0 14 115 43 144 3.99e-40 147
MsaG021290 AT3G11440.4 59.804 102 41 0 14 115 43 144 3.99e-40 147
MsaG021290 AT3G11440.1 59.804 102 41 0 14 115 43 144 3.99e-40 147
MsaG021290 AT5G52260.1 58.974 117 48 0 1 117 1 117 8.42e-40 140
MsaG021290 AT3G48920.1 55.660 106 47 0 9 114 15 120 8.44e-40 139
MsaG021290 AT1G48000.1 61.321 106 39 1 14 117 34 139 8.72e-40 139
MsaG021290 AT1G66370.1 48.630 146 68 2 1 146 1 139 5.25e-39 137
MsaG021290 AT3G53200.1 43.976 166 90 1 14 176 11 176 9.08e-39 136
MsaG021290 AT1G68320.1 52.941 119 56 0 14 132 21 139 6.17e-38 135
MsaG021290 AT5G59780.3 55.882 102 45 0 14 115 10 111 2.27e-36 130
MsaG021290 AT3G46130.1 55.882 102 45 0 14 115 11 112 2.32e-36 130
MsaG021290 AT1G25340.2 51.200 125 56 1 8 132 14 133 3.17e-36 130
MsaG021290 AT5G14750.3 72.727 77 18 1 40 116 13 86 3.50e-36 127
MsaG021290 AT1G66380.1 62.745 102 38 0 14 115 10 111 4.58e-36 126
MsaG021290 AT1G25340.3 51.200 125 56 1 8 132 14 133 6.89e-36 130
MsaG021290 AT3G06490.1 63.366 101 37 0 14 114 21 121 1.12e-35 130
MsaG021290 AT5G49620.1 60.748 107 42 0 8 114 22 128 1.28e-35 130
MsaG021290 AT1G56650.1 61.765 102 39 0 14 115 10 111 8.57e-35 126
MsaG021290 AT1G66390.1 61.765 102 39 0 14 115 10 111 3.91e-34 124
MsaG021290 AT5G35550.2 71.429 77 22 0 40 116 45 121 5.21e-34 124
MsaG021290 AT3G12820.2 71.233 73 21 0 47 119 1 73 1.24e-32 119
MsaG021290 AT5G49620.2 53.719 121 42 1 8 114 22 142 6.75e-32 120
MsaG021290 AT3G47600.2 53.271 107 40 1 45 141 39 145 1.99e-31 119
MsaG021290 AT1G71030.2 63.636 77 28 0 51 127 5 81 2.30e-31 115
MsaG021290 AT1G71030.1 57.778 90 37 1 38 127 7 95 2.70e-31 115
MsaG021290 AT2G26950.1 46.903 113 59 1 9 121 13 124 8.49e-31 119
MsaG021290 AT3G53200.2 44.444 135 72 1 45 176 9 143 7.61e-30 112
MsaG021290 AT3G09230.1 51.376 109 44 2 14 118 55 158 3.51e-29 114
MsaG021290 AT3G27810.2 44.275 131 70 1 45 175 4 131 3.72e-29 109
MsaG021290 AT3G60460.1 46.789 109 57 1 7 114 6 114 4.48e-29 112
MsaG021290 AT1G18960.1 44.361 133 65 5 1 132 1 125 4.86e-29 112
MsaG021290 AT5G40350.2 39.416 137 79 1 45 181 5 137 5.97e-29 108
MsaG021290 AT3G46130.3 64.384 73 26 0 43 115 8 80 2.19e-28 108
MsaG021290 AT5G59780.2 66.197 71 24 0 45 115 20 90 5.10e-28 107
MsaG021290 AT3G46130.4 66.197 71 24 0 45 115 20 90 5.93e-28 108
MsaG021290 AT3G27785.1 49.074 108 54 1 8 115 183 289 3.70e-27 109
MsaG021290 AT5G40360.1 46.535 101 53 1 14 114 158 257 5.60e-27 108
MsaG021290 AT4G18770.1 47.009 117 57 2 14 128 217 330 1.05e-26 108
MsaG021290 AT5G14750.4 71.186 59 17 0 58 116 1 59 1.58e-26 101
MsaG021290 AT5G14750.2 71.186 59 17 0 58 116 1 59 1.58e-26 101
MsaG021290 AT5G58850.1 49.515 103 49 2 14 115 105 205 1.72e-26 107
MsaG021290 AT1G66380.3 63.636 77 28 0 39 115 2 78 5.42e-26 99.4
MsaG021290 AT2G23290.1 50.980 102 49 1 14 115 13 113 6.80e-26 104
MsaG021290 AT3G55730.1 52.427 103 46 2 14 115 56 156 7.69e-26 105
MsaG021290 AT2G39880.1 49.057 106 45 2 14 115 50 150 8.91e-26 105
MsaG021290 AT4G37260.1 49.020 102 51 1 14 115 13 113 1.31e-25 103
MsaG021290 AT5G11050.1 47.573 103 51 2 14 115 105 205 4.30e-25 103
MsaG021290 AT5G67300.1 37.662 154 91 3 14 163 6 158 7.06e-25 101
MsaG021290 AT5G02320.1 43.689 103 57 1 14 116 127 228 1.58e-24 103
MsaG021290 AT5G02320.2 43.689 103 57 1 14 116 127 228 1.58e-24 103
MsaG021290 AT3G23250.2 52.381 84 38 1 58 141 1 82 1.86e-24 98.6
MsaG021290 AT1G69560.1 44.954 109 57 2 9 116 102 208 2.11e-24 100
MsaG021290 AT1G69560.2 44.954 109 57 2 9 116 118 224 2.22e-24 100
MsaG021290 AT5G02320.3 43.689 103 57 1 14 116 67 168 2.31e-24 102
MsaG021290 AT3G50060.1 45.098 102 55 1 14 115 6 106 4.38e-24 99.4
MsaG021290 AT2G25230.1 41.880 117 67 1 4 120 16 131 4.57e-23 95.1
MsaG021290 AT3G09370.2 37.576 165 82 5 14 169 135 287 6.02e-23 98.6
MsaG021290 AT3G09370.3 37.576 165 82 5 14 169 143 295 6.32e-23 98.6
MsaG021290 AT3G09370.1 37.576 165 82 5 14 169 130 282 6.64e-23 98.2
MsaG021290 AT3G09370.1 38.000 100 60 2 14 112 78 176 7.15e-13 68.9
MsaG021290 AT1G26780.1 45.631 103 53 2 14 115 98 198 1.24e-22 95.1
MsaG021290 AT1G26780.2 45.631 103 53 2 14 115 98 198 2.23e-22 95.5
MsaG021290 AT5G11510.3 41.905 105 56 2 14 116 81 182 2.36e-22 97.4
MsaG021290 AT5G11510.3 34.314 102 65 2 12 112 27 127 2.53e-11 64.7
MsaG021290 AT5G11510.1 41.905 105 56 2 14 116 81 182 2.36e-22 97.4
MsaG021290 AT5G11510.1 34.314 102 65 2 12 112 27 127 2.53e-11 64.7
MsaG021290 AT5G11510.4 41.905 105 56 2 14 116 81 182 2.36e-22 97.4
MsaG021290 AT5G11510.4 34.314 102 65 2 12 112 27 127 2.53e-11 64.7
MsaG021290 AT5G11510.2 41.905 105 56 2 14 116 81 182 3.26e-22 96.7
MsaG021290 AT5G11510.2 34.314 102 65 2 12 112 27 127 2.19e-11 64.7
MsaG021290 AT5G11510.5 41.905 105 56 2 14 116 81 182 3.78e-22 96.7
MsaG021290 AT5G11510.5 34.314 102 65 2 12 112 27 127 2.47e-11 64.3
MsaG021290 AT4G32730.5 41.346 104 58 2 14 116 87 188 4.24e-22 96.7
MsaG021290 AT4G32730.4 41.346 104 58 2 14 116 87 188 4.24e-22 96.7
MsaG021290 AT4G32730.3 41.346 104 58 2 14 116 87 188 4.24e-22 96.7
MsaG021290 AT4G32730.2 41.346 104 58 2 14 116 87 188 4.24e-22 96.7
MsaG021290 AT4G32730.1 40.777 103 60 1 14 116 87 188 4.70e-22 96.3
MsaG021290 AT1G17950.1 42.241 116 60 3 14 128 5 114 5.12e-22 92.8
MsaG021290 AT1G22640.2 35.519 183 71 4 88 247 16 174 8.21e-22 90.5
MsaG021290 AT4G33450.1 38.938 113 63 2 3 115 13 119 2.91e-21 90.5
MsaG021290 AT3G29020.1 38.835 103 62 1 14 116 65 166 1.62e-20 88.2
MsaG021290 AT3G29020.2 38.462 104 63 1 13 116 66 168 1.78e-20 89.4
MsaG021290 AT1G66380.2 55.696 79 35 0 14 92 10 88 9.66e-20 82.8
MsaG021290 AT1G73410.1 43.689 103 55 2 14 115 6 106 1.93e-19 85.5
MsaG021290 AT5G17800.1 42.157 102 58 1 14 115 93 193 2.84e-19 86.7
MsaG021290 AT5G61420.1 40.594 101 57 1 81 181 2 99 3.05e-19 85.9
MsaG021290 AT1G73410.2 43.269 104 56 2 13 115 5 106 3.66e-19 84.0
MsaG021290 AT5G40430.1 36.937 111 68 1 4 114 44 152 3.28e-18 82.4
MsaG021290 AT4G00540.2 40.952 105 60 1 14 116 103 207 9.44e-18 82.8
MsaG021290 AT4G00540.1 40.952 105 60 1 14 116 101 205 1.55e-17 82.4
MsaG021290 AT2G37630.1 34.109 129 78 2 17 138 7 135 4.81e-17 80.5
MsaG021290 AT5G39700.1 39.252 107 59 2 15 121 57 157 6.90e-17 77.4
MsaG021290 AT4G28110.2 73.171 41 11 0 88 128 4 44 4.61e-16 75.5
MsaG021290 AT5G15310.3 61.224 49 19 0 84 132 5 53 4.47e-15 73.6
MsaG021290 AT5G14340.2 50.909 55 27 0 88 142 10 64 6.74e-15 71.6
MsaG021290 AT2G02820.1 37.000 100 62 1 16 115 32 130 7.25e-15 74.7
MsaG021290 AT2G02820.2 37.000 100 62 1 16 115 32 130 8.48e-15 74.7
MsaG021290 AT2G02820.3 37.000 100 62 1 16 115 32 130 1.04e-14 73.6
MsaG021290 AT1G14350.2 32.787 122 73 2 17 138 28 140 2.23e-14 73.2
MsaG021290 AT1G14350.1 32.787 122 73 2 17 138 28 140 2.23e-14 73.2
MsaG021290 AT4G25560.2 66.667 45 15 0 73 117 5 49 2.81e-14 70.9
MsaG021290 AT5G59780.1 60.870 46 18 0 70 115 1 46 9.06e-14 68.2
MsaG021290 AT3G46130.2 60.870 46 18 0 70 115 1 46 1.09e-13 68.6
MsaG021290 AT1G74650.3 63.415 41 15 0 77 117 1 41 3.41e-12 65.5
MsaG021290 AT3G28910.2 50.000 54 25 1 77 130 1 52 5.02e-12 65.1
MsaG021290 AT3G18100.4 37.113 97 60 1 12 108 383 478 5.37e-11 63.5
MsaG021290 AT3G18100.2 37.113 97 60 1 12 108 331 426 6.44e-11 63.2
MsaG021290 AT3G18100.1 37.113 97 60 1 12 108 544 639 6.58e-11 63.2
MsaG021290 AT3G18100.3 37.113 97 60 1 12 108 496 591 7.09e-11 63.2

Find 53 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGAAGTTACCACGTTTA+AGG 0.167024 4:-64610852 None:intergenic
GAATGAGAAACTTCGTTTAA+AGG 0.175795 4:-64611277 None:intergenic
ATAGACTTATATCATATATT+AGG 0.189971 4:+64610728 MsaT021290.1:CDS
TGCACCTGCTTATGATTTCT+TGG 0.191888 4:+64611684 MsaT021290.1:CDS
CGGAGTAAGCCAGCTGCTTT+AGG 0.231555 4:-64610781 None:intergenic
TGGGTTTGAAAGGTGGTGTT+TGG 0.257123 4:+64611704 MsaT021290.1:CDS
ATAATGAGATAAAGAATTAT+TGG 0.265414 4:+64611197 MsaT021290.1:CDS
ATCAAACTCCATAGTCTTCT+TGG 0.271142 4:+64610895 MsaT021290.1:CDS
ATGAACACAAACATGGTTAA+AGG 0.278944 4:+64611466 MsaT021290.1:CDS
ATGATATTGTTCTTGTTTGA+TGG 0.288712 4:-64611428 None:intergenic
ATCTCATTATCTGTTCTTCC+AGG 0.316676 4:-64611184 None:intergenic
GGGTTTGAAAGGTGGTGTTT+GGG 0.359186 4:+64611705 MsaT021290.1:CDS
ACTTGTTACCAAGAAGACTA+TGG 0.391300 4:-64610903 None:intergenic
GCACCTGCTTATGATTTCTT+GGG 0.393603 4:+64611685 MsaT021290.1:CDS
GGAGTAAGCCAGCTGCTTTA+GGG 0.400092 4:-64610780 None:intergenic
GGGCACATGGTGAAGGTTGT+TGG 0.403016 4:+64610749 MsaT021290.1:CDS
GGAAATTCTAGCAGTGGAAA+TGG 0.412132 4:+64611655 MsaT021290.1:CDS
GTTAGCTCAAGATTCAAATC+AGG 0.414650 4:-64611508 None:intergenic
TAGACTTATATCATATATTA+GGG 0.419668 4:+64610729 MsaT021290.1:CDS
TTTGGGTTTGCAGAATAGTA+AGG 0.428430 4:+64611609 MsaT021290.1:CDS
TTTAGATGGTCTTTGATAGC+TGG 0.445911 4:+64611154 MsaT021290.1:intron
TGAACACAAACATGGTTAAA+GGG 0.446158 4:+64611467 MsaT021290.1:CDS
CACAAACATGGTTAAAGGGT+TGG 0.452473 4:+64611471 MsaT021290.1:CDS
CAAAAGATATAGTTGTTGGT+AGG 0.458135 4:-64611399 None:intergenic
TCCGGTGGATTAACTATCTC+AGG 0.459556 4:+64610824 MsaT021290.1:CDS
TTTAAAGGCCTATGAGTAGC+AGG 0.460680 4:-64611262 None:intergenic
GAATTGACCCTGCTACTCAT+AGG 0.470038 4:+64611254 MsaT021290.1:CDS
TATGATTTCTTGGGTTTGAA+AGG 0.475287 4:+64611694 MsaT021290.1:CDS
AAGTTACCACGTTTAAGGTC+TGG 0.484461 4:-64610847 None:intergenic
GTGGTAAAAGTTGCCGTCTC+CGG 0.484647 4:+64610806 MsaT021290.1:CDS
AAAAGATATAGTTGTTGGTA+GGG 0.490093 4:-64611398 None:intergenic
TTGATAGCTGGAAGATTACC+TGG 0.490973 4:+64611166 MsaT021290.1:CDS
GATGCAAAAGATATAGTTGT+TGG 0.504785 4:-64611403 None:intergenic
ATTTCCAACAATTTCATCAC+AGG 0.514829 4:-64611638 None:intergenic
TGTACCTGTGATGAAATTGT+TGG 0.517658 4:+64611634 MsaT021290.1:CDS
GATTTCTTGGGTTTGAAAGG+TGG 0.519673 4:+64611697 MsaT021290.1:CDS
AGATCTCTCCCTAAAGCAGC+TGG 0.542426 4:+64610772 MsaT021290.1:CDS
GTAAAAGTTGCCGTCTCCGG+TGG 0.547589 4:+64610809 MsaT021290.1:CDS
GCCTGAGATAGTTAATCCAC+CGG 0.564577 4:-64610825 None:intergenic
ATTGTTGGAAATTCTAGCAG+TGG 0.566489 4:+64611649 MsaT021290.1:CDS
GATAGTTAATCCACCGGAGA+CGG 0.571465 4:-64610819 None:intergenic
TATATTAGGGCACATGGTGA+AGG 0.588854 4:+64610742 MsaT021290.1:CDS
CTCATACAAACAAAGGAGCA+TGG 0.596781 4:+64610689 MsaT021290.1:CDS
AAACCCAAGAAATCATAAGC+AGG 0.597600 4:-64611688 None:intergenic
ATATCATATATTAGGGCACA+TGG 0.621846 4:+64610736 MsaT021290.1:CDS
GGTGGTGTTTGGGATTACAA+AGG 0.622062 4:+64611715 MsaT021290.1:CDS
TCGTGTTCTTGAACACGTGG+TGG 0.634292 4:-64611538 None:intergenic
AACAATTCAGAAACAGAGAG+AGG 0.655779 4:+64611563 MsaT021290.1:CDS
TCATCGTGTTCTTGAACACG+TGG 0.657149 4:-64611541 None:intergenic
TCAAGAAATGAACACAAACA+TGG 0.660042 4:+64611459 MsaT021290.1:CDS
TTAAAGGCCTATGAGTAGCA+GGG 0.677936 4:-64611261 None:intergenic
CTCAGGCCAGACCTTAAACG+TGG 0.678637 4:+64610841 MsaT021290.1:CDS
GCAGCTGGCTTACTCCGATG+TGG 0.683014 4:+64610787 MsaT021290.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 64610661 64611753 64610661 ID=MsaG021290
Chr4 mRNA 64610661 64611753 64610661 ID=MsaT021290.1;Parent=MsaG021290
Chr4 exon 64610661 64610923 64610661 ID=MsaT021290.1.exon1;Parent=MsaT021290.1
Chr4 CDS 64610661 64610923 64610661 ID=cds.MsaT021290.1;Parent=MsaT021290.1
Chr4 exon 64611159 64611753 64611159 ID=MsaT021290.1.exon2;Parent=MsaT021290.1
Chr4 CDS 64611159 64611753 64611159 ID=cds.MsaT021290.1;Parent=MsaT021290.1
Gene Sequence

>MsaT021290.1

ATGGGAAGATCACCTTGTTGTGAAAAAGCTCATACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGACTTATATCATATATTAGGGCACATGGTGAAGGTTGTTGGAGATCTCTCCCTAAAGCAGCTGGCTTACTCCGATGTGGTAAAAGTTGCCGTCTCCGGTGGATTAACTATCTCAGGCCAGACCTTAAACGTGGTAACTTCACAGAAGAAGAAGATGAACTCATCATCAAACTCCATAGTCTTCTTGGTAACAAATGGTCTTTGATAGCTGGAAGATTACCTGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATAAGAAGAAAGCTTTTGAATAGAGGAATTGACCCTGCTACTCATAGGCCTTTAAACGAAGTTTCTCATTCTCATTCTCAATCACAATCTCAAACTCTTCATCTTCAAAATCAAGAAGCTGTTACTATAGCTGTAGCAGCATCTACATCAGCTCCCACTGCTACAAAAACCCTACCAACAACTATATCTTTTGCATCATCCATCAAACAAGAACAATATCATCATCATCATCAAGAAATGAACACAAACATGGTTAAAGGGTTGGTTTTAGAACGTTGTCCTGATTTGAATCTTGAGCTAACAATTAGTCCACCACGTGTTCAAGAACACGATGAACAATTCAGAAACAGAGAGAGGAACAATCTCTGTTTTGTTTGTAGTTTGGGTTTGCAGAATAGTAAGGATTGTACCTGTGATGAAATTGTTGGAAATTCTAGCAGTGGAAATGGTTCTACTGCACCTGCTTATGATTTCTTGGGTTTGAAAGGTGGTGTTTGGGATTACAAAGGCTTAGAAATGAAATGA

Protein sequence

>MsaT021290.1

MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEVSHSHSQSQSQTLHLQNQEAVTIAVAASTSAPTATKTLPTTISFASSIKQEQYHHHHQEMNTNMVKGLVLERCPDLNLELTISPPRVQEHDEQFRNRERNNLCFVCSLGLQNSKDCTCDEIVGNSSSGNGSTAPAYDFLGLKGGVWDYKGLEMK*