AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG023542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG023542 MtrunA17_Chr4g0037141 97.909 287 3 2 1 286 1 285 0.0 580
MsaG023542 MtrunA17_Chr3g0131121 49.488 293 123 5 1 270 1 291 2.16e-87 263
MsaG023542 MtrunA17_Chr8g0385321 83.721 129 21 0 1 129 1 129 1.92e-79 243
MsaG023542 MtrunA17_Chr5g0435101 72.800 125 34 0 3 127 2 126 1.36e-68 212
MsaG023542 MtrunA17_Chr2g0281071 72.868 129 34 1 1 128 1 129 5.59e-66 209
MsaG023542 MtrunA17_Chr2g0323411 72.656 128 35 0 1 128 1 128 8.71e-66 208
MsaG023542 MtrunA17_Chr4g0048511 53.535 198 90 2 1 196 1 198 1.76e-65 208
MsaG023542 MtrunA17_Chr4g0044421 53.552 183 81 2 3 184 2 181 4.17e-65 202
MsaG023542 MtrunA17_Chr7g0217741 67.424 132 43 0 1 132 1 132 8.86e-65 205
MsaG023542 MtrunA17_Chr4g0039971 67.969 128 41 0 1 128 2 129 1.14e-64 206
MsaG023542 MtrunA17_Chr5g0410961 66.906 139 46 0 1 139 1 139 1.30e-64 206
MsaG023542 MtrunA17_Chr7g0270891 53.039 181 80 1 1 176 1 181 1.66e-64 206
MsaG023542 MtrunA17_Chr3g0115821 65.625 128 44 0 1 128 1 128 2.22e-63 202
MsaG023542 MtrunA17_Chr4g0057031 67.176 131 43 0 1 131 1 131 5.71e-63 199
MsaG023542 MtrunA17_Chr7g0275911 73.109 119 32 0 1 119 1 119 7.94e-63 198
MsaG023542 MtrunA17_Chr5g0434571 57.576 165 60 3 1 156 37 200 1.55e-62 201
MsaG023542 MtrunA17_Chr4g0042671 63.571 140 51 0 1 140 1 140 3.70e-62 201
MsaG023542 MtrunA17_Chr8g0346561 74.138 116 30 0 1 116 1 116 4.17e-62 198
MsaG023542 MtrunA17_Chr6g0453471 54.601 163 69 1 1 158 1 163 8.07e-62 199
MsaG023542 MtrunA17_Chr3g0121241 68.000 125 40 0 5 129 35 159 8.56e-62 197
MsaG023542 MtrunA17_Chr1g0193371 50.265 189 92 1 1 187 1 189 1.03e-61 199
MsaG023542 MtrunA17_Chr8g0349261 51.323 189 87 3 1 184 1 189 1.16e-61 197
MsaG023542 MtrunA17_Chr3g0110351 61.871 139 53 0 1 139 1 139 5.21e-61 196
MsaG023542 MtrunA17_Chr4g0058631 53.012 166 66 1 1 166 1 154 1.14e-60 196
MsaG023542 MtrunA17_Chr4g0068061 59.355 155 57 1 1 149 1 155 2.92e-60 194
MsaG023542 MtrunA17_Chr1g0193801 62.879 132 49 0 1 132 1 132 3.31e-60 196
MsaG023542 MtrunA17_Chr6g0452271 60.606 132 52 0 1 132 1 132 4.18e-59 191
MsaG023542 MtrunA17_Chr1g0187761 61.111 144 55 1 1 144 1 143 5.10e-59 189
MsaG023542 MtrunA17_Chr1g0211161 63.780 127 46 0 3 129 4 130 5.33e-59 188
MsaG023542 MtrunA17_Chr7g0228891 50.867 173 80 1 1 168 1 173 8.41e-59 189
MsaG023542 MtrunA17_Chr3g0103281 61.364 132 51 0 1 132 1 132 9.48e-59 190
MsaG023542 MtrunA17_Chr3g0117091 62.791 129 48 0 1 129 1 129 1.06e-58 191
MsaG023542 MtrunA17_Chr4g0070641 71.552 116 33 0 1 116 1 116 1.49e-58 184
MsaG023542 MtrunA17_Chr4g0070611 71.552 116 33 0 1 116 1 116 1.71e-58 189
MsaG023542 MtrunA17_Chr1g0203411 43.103 232 118 4 1 221 1 229 6.48e-58 187
MsaG023542 MtrunA17_Chr5g0395281 62.500 128 48 0 1 128 1 128 6.74e-58 187
MsaG023542 MtrunA17_Chr1g0167661 68.644 118 37 0 1 118 1 118 2.61e-57 184
MsaG023542 MtrunA17_Chr7g0271241 64.885 131 46 0 1 131 1 131 5.55e-57 187
MsaG023542 MtrunA17_Chr1g0167691 69.231 117 36 0 1 117 1 117 8.53e-57 183
MsaG023542 MtrunA17_Chr7g0274581 65.517 116 40 0 1 116 1 116 1.90e-56 181
MsaG023542 MtrunA17_Chr2g0309911 49.701 167 77 1 6 172 5 164 3.48e-55 181
MsaG023542 MtrunA17_Chr7g0261281 47.449 196 73 3 1 196 1 166 3.71e-55 179
MsaG023542 MtrunA17_Chr8g0342521 60.484 124 49 0 1 124 1 124 7.14e-54 178
MsaG023542 MtrunA17_Chr2g0330041 60.000 125 50 0 1 125 1 125 1.31e-53 179
MsaG023542 MtrunA17_Chr1g0194951 61.719 128 49 0 1 128 1 128 4.86e-53 177
MsaG023542 MtrunA17_Chr4g0060721 49.432 176 80 4 1 170 2 174 4.98e-53 176
MsaG023542 MtrunA17_Chr8g0342541 59.677 124 50 0 1 124 1 124 5.06e-53 176
MsaG023542 MtrunA17_Chr7g0269831 63.158 133 48 1 1 132 1 133 2.39e-52 174
MsaG023542 MtrunA17_Chr3g0135311 61.667 120 45 1 1 119 1 120 4.09e-52 174
MsaG023542 MtrunA17_Chr1g0151941 48.276 174 85 3 1 173 1 170 5.56e-52 171
MsaG023542 MtrunA17_Chr7g0217221 41.038 212 114 2 1 201 1 212 6.69e-52 171
MsaG023542 MtrunA17_Chr3g0092401 63.793 116 42 0 1 116 2 117 1.11e-51 171
MsaG023542 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 1.98e-51 171
MsaG023542 MtrunA17_Chr8g0387421 48.256 172 83 2 1 166 1 172 1.98e-51 171
MsaG023542 MtrunA17_Chr7g0254411 61.111 126 47 1 1 124 1 126 2.28e-51 171
MsaG023542 MtrunA17_Chr5g0400821 47.561 164 80 2 1 163 1 159 6.81e-51 169
MsaG023542 MtrunA17_Chr4g0022881 63.158 114 42 0 1 114 1 114 1.68e-50 166
MsaG023542 MtrunA17_Chr1g0152011 60.833 120 46 1 1 119 1 120 1.83e-50 169
MsaG023542 MtrunA17_Chr5g0417821 51.613 155 73 1 14 168 9 161 1.91e-50 167
MsaG023542 MtrunA17_Chr4g0022891 54.930 142 60 1 1 138 1 142 2.61e-50 166
MsaG023542 MtrunA17_Chr4g0022931 46.821 173 76 4 1 172 1 158 5.12e-50 166
MsaG023542 MtrunA17_Chr8g0342481 57.600 125 52 1 1 124 1 125 7.11e-50 169
MsaG023542 MtrunA17_Chr2g0323351 62.393 117 44 0 1 117 1 117 8.10e-50 165
MsaG023542 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 5.03e-49 166
MsaG023542 MtrunA17_Chr4g0022901 59.664 119 47 1 1 118 1 119 5.92e-49 163
MsaG023542 MtrunA17_Chr4g0032401 48.256 172 73 3 14 173 19 186 7.52e-49 165
MsaG023542 MtrunA17_Chr4g0022911 58.824 119 48 1 1 118 1 119 8.59e-49 163
MsaG023542 MtrunA17_Chr4g0054391 43.662 213 89 4 1 195 1 200 3.61e-48 162
MsaG023542 MtrunA17_Chr6g0453211 62.162 111 42 0 1 111 1 111 3.86e-48 162
MsaG023542 MtrunA17_Chr4g0028311 58.475 118 48 1 1 117 1 118 4.34e-48 162
MsaG023542 MtrunA17_Chr7g0264641 56.780 118 50 1 1 117 1 118 6.00e-48 160
MsaG023542 MtrunA17_Chr2g0328771 65.714 105 36 0 14 118 22 126 8.53e-48 162
MsaG023542 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 1.81e-47 161
MsaG023542 MtrunA17_Chr4g0055981 64.486 107 38 0 9 115 52 158 2.43e-47 158
MsaG023542 MtrunA17_Chr8g0343831 61.207 116 41 1 1 116 1 112 2.09e-46 156
MsaG023542 MtrunA17_Chr3g0088461 62.037 108 41 0 9 116 19 126 3.22e-46 158
MsaG023542 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 1.33e-45 157
MsaG023542 MtrunA17_Chr1g0203441 37.743 257 150 6 1 256 1 248 2.63e-45 154
MsaG023542 MtrunA17_Chr7g0240821 67.327 101 33 0 16 116 5 105 6.15e-45 152
MsaG023542 MtrunA17_Chr6g0450101 60.169 118 45 1 1 116 1 118 1.96e-44 150
MsaG023542 MtrunA17_Chr7g0228231 44.944 178 83 2 14 189 16 180 4.84e-44 149
MsaG023542 MtrunA17_Chr6g0487491 53.968 126 49 2 1 117 1 126 7.70e-44 150
MsaG023542 MtrunA17_Chr6g0470971 52.713 129 60 1 7 135 9 136 2.57e-43 149
MsaG023542 MtrunA17_Chr7g0220341 47.436 156 71 3 14 159 27 181 8.74e-43 147
MsaG023542 MtrunA17_Chr7g0247131 54.545 121 52 1 44 161 10 130 1.11e-42 147
MsaG023542 MtrunA17_Chr1g0186061 59.091 110 45 0 6 115 14 123 1.24e-42 146
MsaG023542 MtrunA17_Chr1g0209661 55.200 125 56 0 8 132 23 147 1.56e-42 148
MsaG023542 MtrunA17_Chr8g0354661 63.725 102 37 0 14 115 39 140 1.80e-42 152
MsaG023542 MtrunA17_Chr1g0168661 62.857 105 39 0 14 118 23 127 2.39e-42 146
MsaG023542 MtrunA17_Chr5g0434931 58.333 108 45 0 14 121 37 144 4.31e-42 146
MsaG023542 MtrunA17_Chr5g0434911 55.752 113 50 0 7 119 16 128 9.35e-42 145
MsaG023542 MtrunA17_Chr3g0099131 60.377 106 42 0 10 115 39 144 6.87e-41 148
MsaG023542 MtrunA17_Chr3g0080861 60.784 102 40 0 14 115 39 140 2.11e-40 146
MsaG023542 MtrunA17_Chr7g0228991 59.434 106 43 0 14 119 31 136 2.90e-40 141
MsaG023542 MtrunA17_Chr1g0180391 62.136 103 39 0 14 116 21 123 2.95e-40 139
MsaG023542 MtrunA17_Chr5g0434831 58.491 106 44 0 14 119 9 114 3.92e-40 138
MsaG023542 MtrunA17_Chr1g0194291 65.657 99 34 0 14 112 23 121 7.34e-40 139
MsaG023542 MtrunA17_Chr5g0434841 59.434 106 43 0 14 119 22 127 1.20e-39 140
MsaG023542 MtrunA17_Chr2g0294811 64.130 92 33 0 1 92 1 92 2.56e-39 134
MsaG023542 MtrunA17_Chr8g0360111 60.606 99 39 0 14 112 27 125 4.52e-39 137
MsaG023542 MtrunA17_Chr1g0194301 58.824 102 42 0 14 115 35 136 1.03e-38 137
MsaG023542 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 2.12e-38 130
MsaG023542 MtrunA17_Chr2g0327821 46.667 135 67 2 14 145 8 140 1.05e-37 133
MsaG023542 MtrunA17_Chr1g0154031 56.863 102 44 0 14 115 78 179 3.54e-37 136
MsaG023542 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 5.49e-37 127
MsaG023542 MtrunA17_Chr1g0192411 51.261 119 52 1 14 126 14 132 1.81e-36 134
MsaG023542 MtrunA17_Chr8g0342531 49.138 116 54 1 1 111 1 116 2.19e-36 127
MsaG023542 MtrunA17_Chr2g0322521 61.765 102 39 0 14 115 31 132 2.61e-36 133
MsaG023542 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 8.08e-36 125
MsaG023542 MtrunA17_Chr2g0293911 63.366 101 37 0 14 114 26 126 8.26e-36 130
MsaG023542 MtrunA17_Chr4g0068921 61.386 101 39 0 14 114 26 126 1.07e-35 127
MsaG023542 MtrunA17_Chr5g0440781 47.015 134 67 3 12 142 12 144 1.42e-35 126
MsaG023542 MtrunA17_Chr4g0030881 53.153 111 45 1 12 115 7 117 2.13e-35 128
MsaG023542 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 2.86e-35 124
MsaG023542 MtrunA17_Chr5g0440761 47.015 134 67 3 12 142 12 144 6.32e-35 127
MsaG023542 MtrunA17_Chr5g0441141 47.015 134 67 3 12 142 12 144 8.76e-35 127
MsaG023542 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 1.91e-34 120
MsaG023542 MtrunA17_Chr5g0395221 60.227 88 35 0 1 88 1 88 5.09e-33 116
MsaG023542 MtrunA17_Chr7g0229101 68.571 70 22 0 44 113 4 73 2.06e-30 113
MsaG023542 MtrunA17_Chr8g0334881 47.222 108 56 1 8 114 6 113 6.43e-30 115
MsaG023542 MtrunA17_Chr5g0441131 49.038 104 52 1 12 114 9 112 9.89e-30 111
MsaG023542 MtrunA17_Chr4g0013361 39.716 141 81 3 8 147 6 143 2.34e-29 113
MsaG023542 MtrunA17_Chr3g0099141 52.874 87 41 0 8 94 36 122 1.64e-28 106
MsaG023542 MtrunA17_Chr3g0093811 50.562 89 44 0 44 132 14 102 7.77e-28 108
MsaG023542 MtrunA17_Chr7g0229131 58.108 74 31 0 44 117 4 77 9.86e-28 105
MsaG023542 MtrunA17_Chr5g0434901 66.667 66 22 0 48 113 9 74 2.40e-27 102
MsaG023542 MtrunA17_Chr7g0238631 38.037 163 87 4 14 167 113 270 2.46e-27 110
MsaG023542 MtrunA17_Chr5g0401731 46.552 116 61 1 14 129 15 129 2.70e-27 108
MsaG023542 MtrunA17_Chr5g0429661 37.107 159 89 4 14 169 122 272 4.25e-27 108
MsaG023542 MtrunA17_Chr6g0454921 50.000 102 50 1 14 115 15 115 8.60e-27 103
MsaG023542 MtrunA17_Chr4g0008551 49.123 114 51 3 14 126 38 145 1.41e-26 106
MsaG023542 MtrunA17_Chr3g0117511 47.500 120 58 3 3 119 170 287 1.29e-25 105
MsaG023542 MtrunA17_Chr4g0058991 48.598 107 52 2 14 119 209 313 1.94e-25 104
MsaG023542 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 2.85e-25 101
MsaG023542 MtrunA17_Chr5g0425591 50.602 83 40 1 12 93 9 91 2.92e-24 94.0
MsaG023542 MtrunA17_Chr6g0480581 39.568 139 73 5 14 145 4 138 7.87e-24 97.1
MsaG023542 MtrunA17_Chr7g0228531 49.091 110 51 3 14 120 220 327 8.10e-24 100
MsaG023542 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 1.72e-23 95.9
MsaG023542 MtrunA17_Chr1g0157731 42.718 103 58 1 14 116 91 192 4.13e-23 99.4
MsaG023542 MtrunA17_Chr5g0437321 44.340 106 56 2 8 112 13 116 6.43e-23 95.5
MsaG023542 MtrunA17_Chr5g0417621 42.241 116 59 3 2 116 127 235 2.62e-22 95.9
MsaG023542 MtrunA17_Chr3g0139671 40.385 104 59 2 14 116 85 186 5.70e-22 95.9
MsaG023542 MtrunA17_Chr5g0397841 47.917 96 49 1 14 109 110 204 9.58e-22 94.4
MsaG023542 MtrunA17_Chr5g0397841 33.621 116 70 3 4 112 41 156 9.17e-12 65.1
MsaG023542 MtrunA17_Chr4g0042501 40.870 115 60 3 2 115 98 205 1.21e-21 94.0
MsaG023542 MtrunA17_Chr6g0460661 41.237 97 56 1 14 110 16 111 6.96e-21 87.0
MsaG023542 MtrunA17_Chr7g0228401 45.192 104 49 3 25 128 290 385 9.36e-21 91.7
MsaG023542 MtrunA17_Chr6g0453751 47.191 89 38 2 14 93 22 110 2.39e-20 84.7
MsaG023542 MtrunA17_Chr3g0145551 69.231 52 16 0 91 142 1 52 2.53e-20 83.2
MsaG023542 MtrunA17_Chr1g0177901 46.067 89 47 1 25 113 5 92 3.10e-20 86.7
MsaG023542 MtrunA17_Chr3g0125801 46.602 103 52 2 14 115 16 116 7.85e-20 87.0
MsaG023542 MtrunA17_Chr7g0233061 41.509 106 55 2 10 113 176 276 1.35e-19 87.4
MsaG023542 MtrunA17_Chr7g0228481 42.727 110 58 3 14 120 220 327 3.78e-19 86.7
MsaG023542 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 8.83e-19 85.1
MsaG023542 MtrunA17_Chr7g0238651 37.391 115 64 2 17 123 10 124 1.01e-18 85.1
MsaG023542 MtrunA17_Chr7g0254261 38.793 116 63 3 1 115 81 189 1.66e-17 81.6
MsaG023542 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 9.78e-16 77.0
MsaG023542 MtrunA17_Chr5g0434871 60.000 45 18 0 74 118 2 46 1.54e-15 70.1
MsaG023542 MtrunA17_Chr8g0362231 35.714 112 70 2 16 127 24 133 2.53e-15 75.5
MsaG023542 MtrunA17_Chr1g0193901 53.846 52 24 0 17 68 17 68 1.02e-14 68.9
MsaG023542 MtrunA17_Chr1g0193891 53.846 52 24 0 17 68 17 68 1.02e-14 68.9
MsaG023542 MtrunA17_Chr1g0193871 53.846 52 24 0 17 68 17 68 1.02e-14 68.9
MsaG023542 MtrunA17_Chr1g0193881 53.846 52 24 0 17 68 17 68 1.02e-14 68.9
MsaG023542 MtrunA17_Chr5g0395231 52.941 51 24 0 78 128 5 55 3.06e-14 70.9
MsaG023542 MtrunA17_Chr4g0042621 58.491 53 22 0 88 140 14 66 7.29e-14 70.9
MsaG023542 MtrunA17_Chr2g0322831 61.538 39 15 0 70 108 34 72 3.07e-13 63.9
MsaG023542 MtrunA17_Chr5g0434891 59.091 44 18 0 77 120 1 44 6.06e-13 65.1
MsaG023542 MtrunA17_Chr7g0247141 54.167 48 21 1 1 47 1 48 8.29e-13 62.4
MsaG023542 MtrunA17_Chr7g0233151 50.847 59 26 1 65 120 1 59 1.24e-12 64.7
MsaG023542 MtrunA17_Chr4g0024181 58.537 41 17 0 70 110 28 68 3.35e-12 60.8
MsaG023542 MtrunA17_Chr3g0104491 38.806 67 37 1 53 115 1 67 1.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG023542 AT4G38620.1 59.732 298 92 10 1 286 1 282 1.04e-110 322
MsaG023542 AT4G34990.1 55.556 297 98 7 1 286 1 274 1.69e-102 300
MsaG023542 AT2G16720.1 51.316 304 95 6 1 286 1 269 1.53e-97 288
MsaG023542 AT4G09460.1 61.111 216 69 4 1 214 1 203 1.66e-87 261
MsaG023542 AT1G22640.1 55.294 255 98 3 1 248 1 246 4.91e-87 261
MsaG023542 AT1G35515.1 60.302 199 79 0 1 199 1 199 4.44e-84 251
MsaG023542 AT5G16770.4 75.781 128 31 0 1 128 1 128 8.65e-71 221
MsaG023542 AT5G16770.3 75.781 128 31 0 1 128 1 128 8.65e-71 221
MsaG023542 AT5G16770.1 75.781 128 31 0 1 128 1 128 1.96e-70 221
MsaG023542 AT5G16770.2 75.781 128 31 0 1 128 1 128 1.96e-70 221
MsaG023542 AT3G02940.2 75.000 128 32 0 1 128 1 128 1.77e-69 218
MsaG023542 AT3G02940.1 75.000 128 32 0 1 128 1 128 3.82e-69 217
MsaG023542 AT3G02940.3 75.000 128 32 0 1 128 1 128 3.82e-69 217
MsaG023542 AT4G21440.1 72.656 128 35 0 1 128 1 128 4.28e-67 213
MsaG023542 AT4G28110.1 71.875 128 36 0 1 128 1 128 4.92e-67 210
MsaG023542 AT4G05100.1 72.868 129 34 1 1 128 1 129 6.69e-66 209
MsaG023542 AT3G61250.1 50.267 187 88 2 1 186 1 183 2.01e-64 204
MsaG023542 AT3G13540.1 69.291 127 39 0 4 130 15 141 2.22e-64 202
MsaG023542 AT3G01140.2 58.385 161 64 1 1 158 1 161 2.40e-64 206
MsaG023542 AT4G12350.1 58.491 159 61 1 1 154 1 159 6.72e-64 202
MsaG023542 AT5G15310.4 52.356 191 84 2 1 188 1 187 6.90e-64 201
MsaG023542 AT5G15310.2 52.356 191 84 2 1 188 1 187 1.55e-63 202
MsaG023542 AT5G15310.1 52.356 191 84 2 1 188 1 187 1.84e-63 202
MsaG023542 AT1G57560.2 62.500 144 54 0 1 144 1 144 5.96e-63 200
MsaG023542 AT5G07690.1 63.121 141 52 0 1 141 1 141 6.27e-63 202
MsaG023542 AT1G57560.1 63.309 139 51 0 1 139 1 139 7.11e-63 201
MsaG023542 AT4G22680.1 63.830 141 51 0 1 141 1 141 9.71e-63 199
MsaG023542 AT5G61420.2 50.276 181 87 1 1 181 1 178 1.20e-62 202
MsaG023542 AT1G09540.1 65.909 132 45 0 1 132 1 132 2.79e-62 201
MsaG023542 AT4G17785.1 62.000 150 55 2 1 148 1 150 6.19e-62 200
MsaG023542 AT4G17785.2 62.000 150 55 2 1 148 1 150 6.78e-62 199
MsaG023542 AT5G26660.1 56.707 164 60 2 1 162 1 155 1.12e-61 199
MsaG023542 AT5G16600.1 62.759 145 53 1 1 144 1 145 1.57e-61 198
MsaG023542 AT5G10280.1 57.143 147 63 0 1 147 1 147 1.84e-61 198
MsaG023542 AT3G01140.1 57.143 161 66 1 1 158 44 204 3.07e-61 199
MsaG023542 AT5G60890.1 62.222 135 51 0 1 135 1 135 3.52e-61 196
MsaG023542 AT1G34670.1 63.043 138 51 0 1 138 1 138 3.58e-61 198
MsaG023542 AT5G14340.1 59.859 142 57 0 1 142 13 154 5.72e-61 194
MsaG023542 AT1G66230.1 61.594 138 53 0 1 138 1 138 1.67e-60 194
MsaG023542 AT5G65230.1 64.062 128 46 0 1 128 1 128 3.27e-60 194
MsaG023542 AT4G01680.3 63.636 132 48 0 1 132 1 132 1.26e-59 190
MsaG023542 AT5G56110.1 62.879 132 49 0 1 132 1 132 1.28e-59 192
MsaG023542 AT1G18570.1 58.553 152 61 2 1 150 1 152 1.97e-59 193
MsaG023542 AT5G62320.1 53.179 173 65 3 2 162 3 171 5.55e-59 189
MsaG023542 AT2G47460.1 65.468 139 48 0 1 139 1 139 6.28e-59 192
MsaG023542 AT4G01680.1 63.636 132 48 0 1 132 1 132 8.31e-59 191
MsaG023542 AT5G07700.1 50.282 177 84 1 1 177 1 173 1.05e-58 191
MsaG023542 AT5G07700.2 50.282 177 84 1 1 177 1 173 1.05e-58 191
MsaG023542 AT5G49330.1 73.276 116 31 0 1 116 1 116 1.62e-58 191
MsaG023542 AT5G54230.1 67.969 128 41 0 1 128 1 128 1.65e-58 190
MsaG023542 AT1G74080.1 62.791 129 48 0 1 129 1 129 5.72e-58 189
MsaG023542 AT3G23250.1 50.000 178 86 2 1 177 1 176 3.50e-57 185
MsaG023542 AT2G31180.1 47.739 199 88 2 1 183 1 199 1.75e-56 182
MsaG023542 AT3G62610.1 71.552 116 33 0 1 116 1 116 1.60e-55 183
MsaG023542 AT4G01680.2 58.333 144 48 1 1 132 1 144 2.35e-55 182
MsaG023542 AT1G16490.1 57.047 149 60 2 2 146 4 152 5.91e-55 179
MsaG023542 AT1G06180.1 68.966 116 36 0 1 116 1 116 8.97e-55 178
MsaG023542 AT3G12720.1 61.983 121 46 0 6 126 16 136 1.29e-54 179
MsaG023542 AT1G79180.1 68.696 115 36 0 2 116 4 118 1.68e-54 179
MsaG023542 AT1G74650.1 64.957 117 41 0 1 117 1 117 2.24e-53 177
MsaG023542 AT3G13890.2 64.103 117 42 0 1 117 1 117 2.28e-53 177
MsaG023542 AT3G28470.1 56.818 132 57 0 1 132 1 132 8.76e-53 175
MsaG023542 AT1G56160.1 65.217 115 40 0 2 116 4 118 2.52e-52 173
MsaG023542 AT5G62470.2 57.857 140 57 1 1 140 1 138 5.87e-52 174
MsaG023542 AT1G08810.1 65.517 116 40 0 1 116 1 116 1.29e-51 171
MsaG023542 AT3G12820.1 64.103 117 42 0 3 119 5 121 1.57e-51 169
MsaG023542 AT3G47600.1 47.872 188 85 3 1 175 1 188 2.29e-51 172
MsaG023542 AT4G37780.1 35.664 286 150 6 1 262 1 276 2.57e-51 171
MsaG023542 AT1G74430.1 57.143 133 57 0 1 133 1 133 9.73e-51 168
MsaG023542 AT5G62470.1 57.857 140 56 2 1 140 1 137 1.28e-50 170
MsaG023542 AT3G28910.1 62.069 116 44 0 1 116 1 116 2.19e-50 169
MsaG023542 AT3G13890.1 59.524 126 42 1 1 117 1 126 2.65e-50 170
MsaG023542 AT1G63910.1 56.250 128 56 0 1 128 1 128 7.02e-50 169
MsaG023542 AT5G57620.1 59.167 120 48 1 1 119 1 120 4.34e-49 166
MsaG023542 AT5G65790.1 59.167 120 48 1 1 119 1 120 4.64e-49 167
MsaG023542 AT3G49690.1 58.333 120 49 1 1 119 1 120 9.94e-49 164
MsaG023542 AT5G14750.1 66.019 103 35 0 14 116 18 120 1.18e-48 160
MsaG023542 AT5G23000.1 59.322 118 47 1 1 117 1 118 3.32e-48 163
MsaG023542 AT5G40330.1 65.049 103 36 0 14 116 14 116 4.53e-48 160
MsaG023542 AT5G35550.1 69.231 104 32 0 13 116 15 118 5.07e-48 161
MsaG023542 AT1G79180.2 53.378 148 36 1 2 116 4 151 1.03e-47 162
MsaG023542 AT1G18710.1 54.264 129 59 0 1 129 1 129 1.08e-47 160
MsaG023542 AT3G01530.1 50.943 159 73 1 8 166 21 174 1.16e-47 158
MsaG023542 AT5G12870.1 66.019 103 35 0 14 116 20 122 1.36e-47 160
MsaG023542 AT2G36890.1 55.118 127 56 1 1 126 1 127 8.86e-47 159
MsaG023542 AT3G27920.1 60.000 110 44 0 8 117 10 119 1.48e-46 156
MsaG023542 AT2G36890.2 55.118 127 56 1 1 126 42 168 1.78e-46 159
MsaG023542 AT3G08500.1 62.037 108 41 0 9 116 27 134 3.23e-46 159
MsaG023542 AT5G52600.1 42.222 180 91 2 9 175 9 188 2.74e-45 152
MsaG023542 AT1G22640.3 46.465 198 90 3 58 248 1 189 4.01e-45 151
MsaG023542 AT5G40350.1 46.243 173 79 1 10 182 15 173 1.64e-44 150
MsaG023542 AT3G27810.1 46.199 171 81 2 9 175 17 180 6.19e-44 149
MsaG023542 AT2G26960.1 44.643 168 78 2 9 161 17 184 8.33e-43 152
MsaG023542 AT4G26930.1 50.340 147 66 2 14 160 21 160 1.21e-42 150
MsaG023542 AT3G30210.1 44.444 180 85 3 14 178 29 208 1.72e-42 147
MsaG023542 AT4G13480.1 65.686 102 35 0 14 115 8 109 2.19e-42 146
MsaG023542 AT2G32460.2 62.745 102 38 0 14 115 8 109 5.62e-42 150
MsaG023542 AT2G32460.1 62.745 102 38 0 14 115 20 121 6.03e-42 150
MsaG023542 AT5G55020.1 61.111 108 41 1 14 121 28 134 6.38e-42 151
MsaG023542 AT4G25560.1 62.500 104 39 0 14 117 12 115 1.85e-41 144
MsaG023542 AT5G06100.1 59.804 102 41 0 14 115 34 135 1.97e-41 149
MsaG023542 AT3G24310.1 63.725 102 37 0 14 115 20 121 4.31e-41 143
MsaG023542 AT5G26660.2 57.500 120 40 2 45 162 14 124 5.28e-41 144
MsaG023542 AT3G11440.2 59.804 102 41 0 14 115 43 144 7.69e-41 147
MsaG023542 AT5G06100.5 59.804 102 41 0 14 115 34 135 7.95e-41 148
MsaG023542 AT5G06100.2 59.804 102 41 0 14 115 34 135 7.95e-41 148
MsaG023542 AT5G06100.3 59.804 102 41 0 14 115 34 135 7.95e-41 148
MsaG023542 AT5G06100.4 59.804 102 41 0 14 115 34 135 7.95e-41 148
MsaG023542 AT1G25340.1 53.600 125 58 0 8 132 14 138 1.72e-40 142
MsaG023542 AT3G11440.3 59.804 102 41 0 14 115 43 144 3.79e-40 147
MsaG023542 AT3G11440.4 59.804 102 41 0 14 115 43 144 3.79e-40 147
MsaG023542 AT3G11440.1 59.804 102 41 0 14 115 43 144 3.79e-40 147
MsaG023542 AT2G47190.1 56.481 108 47 0 8 115 16 123 4.10e-40 141
MsaG023542 AT5G52260.1 59.829 117 47 0 1 117 1 117 4.38e-40 140
MsaG023542 AT3G48920.1 55.660 106 47 0 9 114 15 120 1.02e-39 139
MsaG023542 AT1G48000.1 61.321 106 39 1 14 117 34 139 1.63e-39 138
MsaG023542 AT1G66370.1 56.522 115 46 1 1 115 1 111 6.01e-39 137
MsaG023542 AT3G53200.1 61.765 102 39 0 14 115 11 112 2.28e-38 135
MsaG023542 AT1G68320.1 52.941 119 56 0 14 132 21 139 6.69e-38 135
MsaG023542 AT1G25340.2 51.200 125 56 1 8 132 14 133 2.99e-36 131
MsaG023542 AT5G59780.3 55.882 102 45 0 14 115 10 111 3.18e-36 129
MsaG023542 AT5G14750.3 72.727 77 18 1 40 116 13 86 3.52e-36 127
MsaG023542 AT3G46130.1 55.882 102 45 0 14 115 11 112 4.08e-36 130
MsaG023542 AT1G66380.1 62.745 102 38 0 14 115 10 111 4.09e-36 126
MsaG023542 AT5G49620.1 61.682 107 41 0 8 114 22 128 5.49e-36 131
MsaG023542 AT1G25340.3 51.200 125 56 1 8 132 14 133 6.93e-36 130
MsaG023542 AT3G06490.1 63.366 101 37 0 14 114 21 121 8.33e-36 131
MsaG023542 AT1G56650.1 61.765 102 39 0 14 115 10 111 8.98e-35 126
MsaG023542 AT1G66390.1 61.765 102 39 0 14 115 10 111 3.76e-34 124
MsaG023542 AT5G35550.2 71.429 77 22 0 40 116 45 121 5.52e-34 124
MsaG023542 AT3G12820.2 71.233 73 21 0 47 119 1 73 1.18e-32 119
MsaG023542 AT5G49620.2 54.545 121 41 1 8 114 22 142 3.27e-32 121
MsaG023542 AT1G71030.2 63.636 77 28 0 51 127 5 81 2.31e-31 115
MsaG023542 AT1G71030.1 57.778 90 37 1 38 127 7 95 2.98e-31 115
MsaG023542 AT2G26950.1 46.903 113 59 1 9 121 13 124 6.88e-31 119
MsaG023542 AT3G47600.2 45.139 144 66 3 45 175 39 182 1.88e-30 117
MsaG023542 AT3G53200.2 70.423 71 21 0 45 115 9 79 9.62e-30 112
MsaG023542 AT3G09230.1 51.376 109 44 2 14 118 55 158 3.19e-29 115
MsaG023542 AT3G27810.2 44.275 131 70 1 45 175 4 131 3.65e-29 109
MsaG023542 AT3G60460.1 46.789 109 57 1 7 114 6 114 4.35e-29 112
MsaG023542 AT5G40350.2 42.754 138 65 1 45 182 5 128 4.59e-29 109
MsaG023542 AT1G18960.1 43.609 133 66 5 1 132 1 125 1.51e-28 111
MsaG023542 AT3G46130.3 64.384 73 26 0 43 115 8 80 2.08e-28 108
MsaG023542 AT5G59780.2 66.197 71 24 0 45 115 20 90 5.06e-28 107
MsaG023542 AT3G46130.4 66.197 71 24 0 45 115 20 90 5.88e-28 108
MsaG023542 AT5G40360.1 47.525 101 52 1 14 114 158 257 2.59e-27 109
MsaG023542 AT3G27785.1 49.074 108 54 1 8 115 183 289 5.75e-27 109
MsaG023542 AT4G18770.1 47.009 117 57 2 14 128 217 330 9.78e-27 108
MsaG023542 AT5G58850.1 49.515 103 49 2 14 115 105 205 1.64e-26 107
MsaG023542 AT5G14750.4 71.186 59 17 0 58 116 1 59 1.67e-26 101
MsaG023542 AT5G14750.2 71.186 59 17 0 58 116 1 59 1.67e-26 101
MsaG023542 AT1G66380.3 63.636 77 28 0 39 115 2 78 5.71e-26 99.0
MsaG023542 AT3G55730.1 52.427 103 46 2 14 115 56 156 6.84e-26 105
MsaG023542 AT2G23290.1 50.980 102 49 1 14 115 13 113 7.32e-26 104
MsaG023542 AT2G39880.1 49.057 106 45 2 14 115 50 150 1.27e-25 104
MsaG023542 AT4G37260.1 49.020 102 51 1 14 115 13 113 1.39e-25 103
MsaG023542 AT5G11050.1 47.573 103 51 2 14 115 105 205 4.02e-25 103
MsaG023542 AT5G67300.1 37.662 154 91 3 14 163 6 158 6.25e-25 101
MsaG023542 AT3G23250.2 52.381 84 38 1 58 141 1 82 1.04e-24 99.4
MsaG023542 AT5G02320.1 43.689 103 57 1 14 116 127 228 1.42e-24 103
MsaG023542 AT5G02320.2 43.689 103 57 1 14 116 127 228 1.42e-24 103
MsaG023542 AT5G02320.3 43.689 103 57 1 14 116 67 168 2.21e-24 102
MsaG023542 AT1G69560.1 44.954 109 57 2 9 116 102 208 3.92e-24 100
MsaG023542 AT3G50060.1 45.098 102 55 1 14 115 6 106 4.29e-24 99.4
MsaG023542 AT1G69560.2 44.954 109 57 2 9 116 118 224 4.42e-24 100
MsaG023542 AT3G09370.1 37.576 165 82 5 14 169 130 282 4.98e-23 98.6
MsaG023542 AT3G09370.2 37.576 165 82 5 14 169 135 287 5.33e-23 98.6
MsaG023542 AT3G09370.3 37.576 165 82 5 14 169 143 295 5.43e-23 98.6
MsaG023542 AT2G25230.1 41.880 117 67 1 4 120 16 131 7.42e-23 94.7
MsaG023542 AT1G22640.2 36.905 168 90 3 88 248 16 174 1.74e-22 92.4
MsaG023542 AT1G26780.1 45.631 103 53 2 14 115 98 198 2.04e-22 94.4
MsaG023542 AT5G11510.3 41.905 105 56 2 14 116 81 182 2.49e-22 97.4
MsaG023542 AT5G11510.3 35.294 102 64 2 12 112 27 127 1.36e-11 65.5
MsaG023542 AT5G11510.1 41.905 105 56 2 14 116 81 182 2.49e-22 97.4
MsaG023542 AT5G11510.1 35.294 102 64 2 12 112 27 127 1.36e-11 65.5
MsaG023542 AT5G11510.4 41.905 105 56 2 14 116 81 182 2.49e-22 97.4
MsaG023542 AT5G11510.4 35.294 102 64 2 12 112 27 127 1.36e-11 65.5
MsaG023542 AT5G11510.2 41.905 105 56 2 14 116 81 182 3.46e-22 96.7
MsaG023542 AT5G11510.2 35.294 102 64 2 12 112 27 127 1.16e-11 65.5
MsaG023542 AT1G26780.2 45.631 103 53 2 14 115 98 198 3.46e-22 95.1
MsaG023542 AT5G11510.5 41.905 105 56 2 14 116 81 182 4.21e-22 96.7
MsaG023542 AT5G11510.5 35.294 102 64 2 12 112 27 127 1.26e-11 65.5
MsaG023542 AT1G17950.1 42.241 116 60 3 14 128 5 114 4.39e-22 92.8
MsaG023542 AT4G32730.5 41.346 104 58 2 14 116 87 188 4.51e-22 96.7
MsaG023542 AT4G32730.4 41.346 104 58 2 14 116 87 188 4.51e-22 96.7
MsaG023542 AT4G32730.3 41.346 104 58 2 14 116 87 188 4.51e-22 96.7
MsaG023542 AT4G32730.2 41.346 104 58 2 14 116 87 188 4.51e-22 96.7
MsaG023542 AT4G32730.1 40.777 103 60 1 14 116 87 188 4.95e-22 96.3
MsaG023542 AT4G33450.1 38.938 113 63 2 3 115 13 119 2.94e-21 90.5
MsaG023542 AT3G29020.1 38.835 103 62 1 14 116 65 166 3.24e-20 87.4
MsaG023542 AT3G29020.2 38.462 104 63 1 13 116 66 168 3.42e-20 89.0
MsaG023542 AT1G66380.2 55.696 79 35 0 14 92 10 88 9.41e-20 82.8
MsaG023542 AT1G73410.1 43.689 103 55 2 14 115 6 106 1.81e-19 85.5
MsaG023542 AT5G17800.1 42.157 102 58 1 14 115 93 193 2.45e-19 86.7
MsaG023542 AT5G61420.1 40.594 101 57 1 81 181 2 99 2.49e-19 86.3
MsaG023542 AT1G73410.2 43.269 104 56 2 13 115 5 106 2.94e-19 84.3
MsaG023542 AT5G40430.1 36.937 111 68 1 4 114 44 152 5.80e-18 81.6
MsaG023542 AT4G00540.2 40.952 105 60 1 14 116 103 207 7.34e-18 83.2
MsaG023542 AT4G00540.1 40.952 105 60 1 14 116 101 205 1.21e-17 82.8
MsaG023542 AT2G37630.1 41.667 96 54 1 17 110 7 102 6.05e-17 80.5
MsaG023542 AT5G39700.1 34.615 130 79 2 15 144 57 180 8.00e-17 77.4
MsaG023542 AT4G28110.2 73.171 41 11 0 88 128 4 44 4.27e-16 75.5
MsaG023542 AT5G15310.3 61.224 49 19 0 84 132 5 53 4.27e-15 73.6
MsaG023542 AT5G14340.2 50.909 55 27 0 88 142 10 64 4.66e-15 72.4
MsaG023542 AT2G02820.1 37.000 100 62 1 16 115 32 130 1.10e-14 74.3
MsaG023542 AT2G02820.2 37.000 100 62 1 16 115 32 130 1.24e-14 73.9
MsaG023542 AT2G02820.3 37.000 100 62 1 16 115 32 130 1.63e-14 73.2
MsaG023542 AT4G25560.2 66.667 45 15 0 73 117 5 49 2.76e-14 70.9
MsaG023542 AT1G14350.2 36.000 100 63 1 16 115 27 125 4.32e-14 72.4
MsaG023542 AT1G14350.1 36.000 100 63 1 16 115 27 125 4.32e-14 72.4
MsaG023542 AT5G59780.1 60.870 46 18 0 70 115 1 46 8.81e-14 68.6
MsaG023542 AT3G46130.2 60.870 46 18 0 70 115 1 46 1.07e-13 68.6
MsaG023542 AT1G74650.3 63.415 41 15 0 77 117 1 41 3.29e-12 65.5
MsaG023542 AT3G28910.2 50.000 54 25 1 77 130 1 52 5.32e-12 64.7
MsaG023542 AT3G18100.4 37.113 97 60 1 12 108 383 478 7.71e-11 62.8
MsaG023542 AT3G18100.1 37.113 97 60 1 12 108 544 639 9.70e-11 62.8

Find 52 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGAGAAACTTCGTTTAA+AGG 0.146777 4:+89853790 None:intergenic
ATGATATTGTTCTTGTTTAA+TGG 0.156062 4:+89853639 None:intergenic
CTGTGAAGTTACCACGTTTA+AGG 0.167024 4:+89854215 None:intergenic
TGCACCTGCTTATGATTTCT+TGG 0.191888 4:-89853380 MsaT023542.1:CDS
CGGAGTAAGCCAGCTGCTTT+AGG 0.231555 4:+89854286 None:intergenic
TGGGTTTGAAAGGTGGTGTT+TGG 0.257123 4:-89853360 MsaT023542.1:CDS
ATAATGAGATAAAGAATTAT+TGG 0.265414 4:-89853870 MsaT023542.1:CDS
ATCAAACTCCATAGTCTTCT+TGG 0.271142 4:-89854172 MsaT023542.1:CDS
ATGAACGCAAACATGGTTAA+AGG 0.308174 4:-89853598 MsaT023542.1:CDS
ATCTCATTATCTGTTCTTCC+AGG 0.316676 4:+89853883 None:intergenic
GGGTTTGAAAGGTGGTGTTT+GGG 0.359186 4:-89853359 MsaT023542.1:CDS
ATAGACTTATATCATATATT+AGG 0.379307 4:-89854339 MsaT023542.1:CDS
ACTTGTTACCAAGAAGACTA+TGG 0.391300 4:+89854164 None:intergenic
GCACCTGCTTATGATTTCTT+GGG 0.393603 4:-89853379 MsaT023542.1:CDS
GGAGTAAGCCAGCTGCTTTA+GGG 0.400092 4:+89854287 None:intergenic
GGTCACATGGTGAAGGTTGT+TGG 0.406342 4:-89854318 MsaT023542.1:CDS
GGAAATTCTAGCAGTGGAAA+TGG 0.412132 4:-89853409 MsaT023542.1:CDS
GTTAGCTCAAGATTCAAATC+AGG 0.414650 4:+89853556 None:intergenic
TTTGGGTTTGCAGAATAGTA+AGG 0.428430 4:-89853455 MsaT023542.1:CDS
CGCAAACATGGTTAAAGGGT+TGG 0.434916 4:-89853593 MsaT023542.1:CDS
TTTAGATGGTCTTTGATAGC+TGG 0.445911 4:-89853913 MsaT023542.1:intron
TCCGGTGGATTAACTATCTC+AGG 0.459556 4:-89854243 MsaT023542.1:CDS
TTTAAAGGCCTATGAGTAGC+AGG 0.460680 4:+89853805 None:intergenic
GAATTGACCCTGCTACTCAT+AGG 0.470038 4:-89853813 MsaT023542.1:CDS
TGAACGCAAACATGGTTAAA+GGG 0.471288 4:-89853597 MsaT023542.1:CDS
TATGATTTCTTGGGTTTGAA+AGG 0.475287 4:-89853370 MsaT023542.1:CDS
AAGTTACCACGTTTAAGGTC+TGG 0.484461 4:+89854220 None:intergenic
GTGGTAAAAGTTGCCGTCTC+CGG 0.484647 4:-89854261 MsaT023542.1:CDS
TTGATAGCTGGAAGATTACC+TGG 0.490973 4:-89853901 MsaT023542.1:CDS
CAAAAGATATAGTCGTTGGT+AGG 0.491921 4:+89853668 None:intergenic
ATTTCCAACAATTTCATCAC+AGG 0.514829 4:+89853426 None:intergenic
TGTACCTGTGATGAAATTGT+TGG 0.517658 4:-89853430 MsaT023542.1:CDS
GATTTCTTGGGTTTGAAAGG+TGG 0.519673 4:-89853367 MsaT023542.1:CDS
AGATCTCTCCCTAAAGCAGC+TGG 0.542426 4:-89854295 MsaT023542.1:CDS
GTAAAAGTTGCCGTCTCCGG+TGG 0.547589 4:-89854258 MsaT023542.1:CDS
GCCTGAGATAGTTAATCCAC+CGG 0.564577 4:+89854242 None:intergenic
ATTGTTGGAAATTCTAGCAG+TGG 0.566489 4:-89853415 MsaT023542.1:CDS
GATAGTTAATCCACCGGAGA+CGG 0.571465 4:+89854248 None:intergenic
AAAAGATATAGTCGTTGGTA+GGG 0.576763 4:+89853669 None:intergenic
GATGCAAAAGATATAGTCGT+TGG 0.582148 4:+89853664 None:intergenic
TCAAGAAATGAACGCAAACA+TGG 0.586898 4:-89853605 MsaT023542.1:CDS
TATATTAGGTCACATGGTGA+AGG 0.596697 4:-89854325 MsaT023542.1:CDS
CTCATACAAACAAAGGAGCA+TGG 0.596781 4:-89854378 MsaT023542.1:CDS
AAACCCAAGAAATCATAAGC+AGG 0.597600 4:+89853376 None:intergenic
TCATGTTCTTGAACGCGTGG+TGG 0.611488 4:+89853526 None:intergenic
GGTGGTGTTTGGGATTACAA+AGG 0.622062 4:-89853349 MsaT023542.1:CDS
ATATCATATATTAGGTCACA+TGG 0.626116 4:-89854331 MsaT023542.1:CDS
TCATCATGTTCTTGAACGCG+TGG 0.653692 4:+89853523 None:intergenic
AACAATTCAGAAACAGAGAG+AGG 0.655779 4:-89853501 MsaT023542.1:CDS
TTAAAGGCCTATGAGTAGCA+GGG 0.677936 4:+89853806 None:intergenic
CTCAGGCCAGACCTTAAACG+TGG 0.678637 4:-89854226 MsaT023542.1:CDS
GCAGCTGGCTTACTCCGATG+TGG 0.683014 4:-89854280 MsaT023542.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 89853333 89854428 89853333 ID=MsaG023542
Chr4 mRNA 89853333 89854428 89853333 ID=MsaT023542.1;Parent=MsaG023542
Chr4 exon 89853333 89853930 89853333 ID=MsaT023542.1.exon2;Parent=MsaT023542.1
Chr4 CDS 89853333 89853930 89853333 ID=cds.MsaT023542.1;Parent=MsaT023542.1
Chr4 exon 89854166 89854428 89854166 ID=MsaT023542.1.exon1;Parent=MsaT023542.1
Chr4 CDS 89854166 89854428 89854166 ID=cds.MsaT023542.1;Parent=MsaT023542.1
Gene Sequence

>MsaT023542.1

ATGGGAAGATCACCTTGTTGTGAAAAAGCTCATACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGACTTATATCATATATTAGGTCACATGGTGAAGGTTGTTGGAGATCTCTCCCTAAAGCAGCTGGCTTACTCCGATGTGGTAAAAGTTGCCGTCTCCGGTGGATTAACTATCTCAGGCCAGACCTTAAACGTGGTAACTTCACAGAAGAAGAAGATGAACTCATCATCAAACTCCATAGTCTTCTTGGTAACAAATGGTCTTTGATAGCTGGAAGATTACCTGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATAAGAAGAAAGCTTTTGAATAGAGGAATTGACCCTGCTACTCATAGGCCTTTAAACGAAGTTTCTCATTCTCAATCTCAATCACAATCTCAAACTCTTCATCTTCAAAATCAAGAAGCTGTTACAATAGCTGTAGCAGCATCTACATCAGCTCCTACTGCCACAAAAACCCTACCAACGACTATATCTTTTGCATCATCCATTAAACAAGAACAATATCATCATCATCATCATCAAGAAATGAACGCAAACATGGTTAAAGGGTTGGTTTTAGAACGTTGTCCTGATTTGAATCTTGAGCTAACAATTAGTCCACCACGCGTTCAAGAACATGATGAACAATTCAGAAACAGAGAGAGGAACAATCTCTGTTTTGTTTGTAGTTTGGGTTTGCAGAATAGTAAGGATTGTACCTGTGATGAAATTGTTGGAAATTCTAGCAGTGGAAATGGTTCTACTGCACCTGCTTATGATTTCTTGGGTTTGAAAGGTGGTGTTTGGGATTACAAAGGCTTAGAAATGAAATGA
Protein sequence

>MsaT023542.1

MGRSPCCEKAHTNKGAWTKEEDDRLISYIRSHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEVSHSQSQSQSQTLHLQNQEAVTIAVAASTSAPTATKTLPTTISFASSIKQEQYHHHHHQEMNANMVKGLVLERCPDLNLELTISPPRVQEHDEQFRNRERNNLCFVCSLGLQNSKDCTCDEIVGNSSSGNGSTAPAYDFLGLKGGVWDYKGLEMK*