AlfalfaGEDB | MsaG023902

M. sativa ssp. caerulea / MsaG023902

KEGG: -
GO: GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043455 GO:0043565 GO:0044212 GO:0045595 GO:0045597 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900376 GO:1901141 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1904368 GO:1904369 GO:1990837 GO:2000112 GO:2000762 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023902	XP_003630131.2	97.619	126	3	0	1	126	109	234	6.21e-88	265

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023902	sp\|Q9SVB7\|WRK13_ARATH	71.200	125	24	3	13	126	181	304	4.60e-58	184

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023902	tr\|G7LBC7\|G7LBC7_MEDTR	97.619	126	3	0	1	126	109	234	2.97e-88	265

TFs/TRs:

Gene ID	Type	Classification
MsaG023902	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG005136	MsaG023902	0.805025	2.753014e-49	4.176255e-47
MsaG009121	MsaG023902	0.800675	2.157969e-48	2.962566e-46
MsaG016304	MsaG023902	0.803965	4.567085e-49	6.759872e-47
MsaG016358	MsaG023902	0.813212	4.943552e-51	9.136713e-49
MsaG023705	MsaG023902	0.848554	1.078440e-59	5.563762e-57
MsaG023706	MsaG023902	0.884104	5.466382e-71	1.198914e-67
MsaG023711	MsaG023902	0.823218	2.752854e-53	6.597042e-51
MsaG023716	MsaG023902	0.804371	3.762681e-49	5.621943e-47
MsaG023718	MsaG023902	0.893665	1.136270e-74	4.070526e-71
MsaG023792	MsaG023902	0.838850	4.143663e-57	1.560521e-54
MsaG023794	MsaG023902	0.851401	1.736963e-60	9.879805e-58
MsaG023834	MsaG023902	0.840093	1.977003e-57	7.740284e-55
MsaG023902	MsaG024053	0.845812	6.039587e-59	2.842710e-56
MsaG023902	MsaG029618	0.810733	1.703959e-50	2.962331e-48
MsaG023902	MsaG031124	0.804742	3.152041e-49	4.750133e-47
MsaG023902	MsaG035277	0.809255	3.533589e-50	5.926612e-48
MsaG023902	MsaG004075	0.849917	4.521105e-60	2.443312e-57
MsaG023902	MsaG041727	0.800925	1.919450e-48	2.649903e-46
MsaG023902	MsaG042876	0.828435	1.611525e-54	4.461257e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023902	MtrunA17_Chr8g0383351	97.619	126	3	0	1	126	109	234	5.72e-92	265
MsaG023902	MtrunA17_Chr3g0129361	85.217	115	13	3	14	126	108	220	1.41e-59	182
MsaG023902	MtrunA17_Chr8g0335811	73.737	99	25	1	20	118	123	220	1.25e-46	150
MsaG023902	MtrunA17_Chr5g0418781	64.368	87	30	1	22	108	95	180	2.28e-33	117
MsaG023902	MtrunA17_Chr1g0194481	65.432	81	26	2	32	111	139	218	6.89e-31	112
MsaG023902	MtrunA17_Chr2g0294231	66.667	78	24	2	35	111	187	263	7.72e-30	110
MsaG023902	MtrunA17_Chr4g0051881	69.444	72	21	1	37	108	164	234	9.35e-30	109
MsaG023902	MtrunA17_Chr3g0106491	62.025	79	29	1	30	108	344	421	1.23e-29	111
MsaG023902	MtrunA17_Chr3g0106491	56.140	57	24	1	52	108	198	253	2.16e-15	71.2
MsaG023902	MtrunA17_Chr7g0270191	56.566	99	39	3	10	108	107	201	1.28e-29	108
MsaG023902	MtrunA17_Chr3g0101131	62.338	77	28	1	32	108	396	471	1.69e-29	111
MsaG023902	MtrunA17_Chr3g0101131	53.030	66	29	2	44	108	234	298	1.53e-15	71.6
MsaG023902	MtrunA17_Chr5g0445311	59.740	77	30	1	32	108	345	420	2.40e-29	110
MsaG023902	MtrunA17_Chr5g0445311	53.125	64	26	2	52	112	200	262	1.11e-14	68.9
MsaG023902	MtrunA17_Chr7g0218081	50.926	108	51	2	2	108	360	466	2.81e-29	110
MsaG023902	MtrunA17_Chr7g0218081	52.174	69	31	2	41	108	216	283	5.94e-17	75.5
MsaG023902	MtrunA17_Chr5g0432161	58.242	91	31	2	18	108	394	477	4.04e-29	110
MsaG023902	MtrunA17_Chr5g0432161	56.140	57	24	1	52	108	244	299	2.30e-15	71.2
MsaG023902	MtrunA17_Chr7g0248721	53.000	100	41	4	23	119	110	206	7.69e-29	104
MsaG023902	MtrunA17_Chr5g0443131	65.278	72	24	1	37	108	143	213	3.09e-28	104
MsaG023902	MtrunA17_Chr5g0418191	54.023	87	39	1	22	108	291	376	6.78e-28	105
MsaG023902	MtrunA17_Chr5g0418191	45.745	94	44	4	34	123	134	224	4.34e-16	73.2
MsaG023902	MtrunA17_Chr4g0042831	40.769	130	64	2	4	124	221	346	9.79e-28	104
MsaG023902	MtrunA17_Chr4g0042831	54.386	57	26	0	52	108	145	201	4.14e-16	72.8
MsaG023902	MtrunA17_Chr3g0079691	57.831	83	33	2	27	108	470	551	2.32e-27	105
MsaG023902	MtrunA17_Chr3g0079691	56.140	57	24	1	52	108	280	335	1.22e-15	72.0
MsaG023902	MtrunA17_Chr4g0068541	66.216	74	24	1	35	108	192	264	3.45e-27	103
MsaG023902	MtrunA17_Chr7g0224801	62.857	70	25	1	39	108	81	149	4.06e-27	98.6
MsaG023902	MtrunA17_Chr8g0386241	40.870	115	62	2	16	125	63	176	4.54e-27	99.0
MsaG023902	MtrunA17_Chr1g0150801	55.814	86	37	1	23	108	74	158	4.91e-27	98.2
MsaG023902	MtrunA17_Chr4g0004911	57.500	80	33	1	29	108	314	392	1.00e-26	103
MsaG023902	MtrunA17_Chr4g0004911	52.632	57	27	0	52	108	184	240	8.37e-16	72.4
MsaG023902	MtrunA17_Chr7g0249311	50.575	87	42	1	22	108	363	448	2.43e-26	102
MsaG023902	MtrunA17_Chr7g0249311	55.172	58	25	1	52	109	179	235	2.42e-16	73.9
MsaG023902	MtrunA17_Chr7g0249301	52.874	87	40	1	22	108	263	348	3.85e-26	100
MsaG023902	MtrunA17_Chr7g0249301	52.381	63	29	1	50	112	60	121	6.81e-16	72.4
MsaG023902	MtrunA17_Chr7g0243891	55.696	79	34	1	30	108	353	430	1.83e-25	99.8
MsaG023902	MtrunA17_Chr7g0243891	54.386	57	25	1	52	108	216	271	5.94e-15	69.7
MsaG023902	MtrunA17_Chr1g0188941	47.826	92	47	1	17	108	17	107	3.59e-25	92.0
MsaG023902	MtrunA17_Chr3g0129321	58.442	77	30	2	37	112	104	179	3.35e-24	92.0
MsaG023902	MtrunA17_Chr7g0263531	57.534	73	30	1	36	108	346	417	4.03e-24	95.5
MsaG023902	MtrunA17_Chr7g0263531	57.143	56	23	1	53	108	190	244	2.66e-15	70.9
MsaG023902	MtrunA17_Chr1g0189391	43.519	108	46	2	31	123	62	169	2.31e-22	89.7
MsaG023902	MtrunA17_Chr7g0238921	42.424	99	57	0	10	108	82	180	2.67e-22	89.4
MsaG023902	MtrunA17_Chr8g0383251	53.521	71	32	1	38	108	95	164	9.92e-21	82.8
MsaG023902	MtrunA17_Chr5g0447701	50.667	75	36	1	36	110	237	310	2.42e-20	84.7
MsaG023902	MtrunA17_Chr2g0333851	44.086	93	45	3	33	123	149	236	7.07e-20	82.8
MsaG023902	MtrunA17_Chr1g0147881	44.318	88	44	2	23	109	237	320	4.48e-19	80.9
MsaG023902	MtrunA17_Chr6g0485431	47.945	73	36	2	37	108	140	211	6.26e-19	80.5
MsaG023902	MtrunA17_Chr4g0053281	43.678	87	44	2	24	109	242	324	6.29e-19	80.5
MsaG023902	MtrunA17_Chr5g0401821	43.820	89	45	2	24	111	175	259	8.15e-19	79.3
MsaG023902	MtrunA17_Chr3g0139021	46.429	84	40	3	26	108	292	371	1.46e-18	79.7
MsaG023902	MtrunA17_Chr4g0060271	46.753	77	39	2	34	109	238	313	3.81e-18	79.0
MsaG023902	MtrunA17_Chr2g0322391	48.718	78	38	2	46	121	343	420	5.76e-18	78.6
MsaG023902	MtrunA17_Chr7g0228941	50.000	66	32	1	49	113	49	114	9.55e-18	73.6
MsaG023902	MtrunA17_Chr4g0074001	48.052	77	39	1	32	108	340	415	1.83e-17	77.0
MsaG023902	MtrunA17_Chr1g0150281	52.632	57	26	1	53	108	141	197	2.77e-17	75.5
MsaG023902	MtrunA17_Chr3g0099641	49.231	65	32	1	46	109	245	309	3.28e-17	76.3
MsaG023902	MtrunA17_Chr7g0216891	52.381	63	29	1	47	108	214	276	4.66e-17	75.9
MsaG023902	MtrunA17_Chr4g0071521	39.080	87	48	2	24	109	221	303	5.95e-17	74.7
MsaG023902	MtrunA17_Chr3g0136961	50.000	60	29	1	51	109	137	196	1.56e-16	73.6
MsaG023902	MtrunA17_Chr1g0184691	47.619	63	32	1	48	109	289	351	2.39e-16	73.6
MsaG023902	MtrunA17_Chr7g0270831	51.562	64	30	1	46	108	210	273	2.61e-16	73.6
MsaG023902	MtrunA17_Chr4g0025061	45.349	86	44	3	38	121	347	431	6.07e-16	72.8
MsaG023902	MtrunA17_Chr4g0075201	51.562	64	30	1	46	108	261	324	7.47e-16	72.4
MsaG023902	MtrunA17_Chr4g0001361	43.478	69	38	1	50	117	160	228	9.89e-16	71.6
MsaG023902	MtrunA17_Chr3g0126391	53.333	60	25	1	51	107	132	191	9.96e-16	71.6
MsaG023902	MtrunA17_Chr2g0288871	50.000	64	31	1	46	108	299	362	1.13e-15	72.0
MsaG023902	MtrunA17_Chr8g0387981	50.769	65	29	1	52	113	132	196	1.16e-15	71.6
MsaG023902	MtrunA17_Chr1g0150271	43.077	65	36	1	50	113	99	163	1.31e-15	70.5
MsaG023902	MtrunA17_Chr4g0051181	51.667	60	28	1	50	108	241	300	1.42e-15	71.6
MsaG023902	MtrunA17_Chr8g0348311	40.816	98	48	4	12	108	124	212	8.51e-15	68.9
MsaG023902	MtrunA17_Chr7g0244981	50.847	59	26	1	52	107	122	180	1.36e-14	68.2
MsaG023902	MtrunA17_Chr2g0315381	50.820	61	27	1	50	107	142	202	3.29e-14	67.4
MsaG023902	MtrunA17_Chr5g0432071	52.632	57	26	1	52	108	104	159	4.69e-14	65.9
MsaG023902	MtrunA17_Chr8g0379461	48.276	58	29	1	53	109	77	134	5.73e-14	65.9
MsaG023902	MtrunA17_Chr5g0447711	42.667	75	42	1	36	110	215	288	6.87e-14	66.2
MsaG023902	MtrunA17_Chr2g0302391	34.711	121	64	4	2	108	149	268	8.76e-14	66.6
MsaG023902	MtrunA17_Chr2g0315361	45.902	61	30	1	50	107	146	206	9.21e-14	65.9
MsaG023902	MtrunA17_Chr7g0275531	50.000	60	27	1	51	107	117	176	1.48e-13	65.5
MsaG023902	MtrunA17_Chr4g0025051	45.946	74	38	2	50	121	333	406	1.58e-13	65.9
MsaG023902	MtrunA17_Chr8g0387501	47.692	65	32	2	46	108	122	186	1.80e-13	65.1
MsaG023902	MtrunA17_Chr7g0244971	35.043	117	63	4	1	107	68	181	2.03e-13	65.1
MsaG023902	MtrunA17_Chr2g0284321	46.552	58	30	1	53	109	36	93	2.39e-13	63.9
MsaG023902	MtrunA17_Chr2g0289181	46.552	58	30	1	53	109	15	72	6.70e-13	62.8
MsaG023902	MtrunA17_Chr7g0270051	49.123	57	28	1	53	108	54	110	8.20e-13	63.2
MsaG023902	MtrunA17_Chr7g0248691	44.118	68	31	2	42	108	150	211	8.66e-13	63.5
MsaG023902	MtrunA17_Chr8g0334541	45.763	59	29	1	52	107	103	161	9.96e-13	62.8
MsaG023902	MtrunA17_Chr8g0347251	41.096	73	40	1	51	120	135	207	1.22e-12	63.2
MsaG023902	MtrunA17_Chr8g0350621	44.068	59	30	1	52	107	111	169	1.39e-12	62.4
MsaG023902	MtrunA17_Chr2g0293481	46.667	60	31	1	50	108	265	324	2.19e-12	62.4
MsaG023902	MtrunA17_Chr3g0128671	40.580	69	33	2	50	110	125	193	3.50e-12	61.6
MsaG023902	MtrunA17_Chr2g0319961	46.552	58	30	1	53	109	81	138	4.76e-12	60.8
MsaG023902	MtrunA17_Chr2g0315371	42.623	61	32	1	50	107	139	199	8.35e-12	60.5
MsaG023902	MtrunA17_Chr1g0202461	36.264	91	51	2	20	109	235	319	1.69e-11	60.1
MsaG023902	MtrunA17_Chr4g0024391	41.892	74	41	2	50	121	227	300	2.29e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023902	AT4G39410.1	71.200	125	24	3	13	126	181	304	4.67e-59	184
MsaG023902	AT2G44745.1	77.895	95	19	2	20	113	113	206	2.58e-46	149
MsaG023902	AT1G69310.4	65.060	83	28	1	26	108	122	203	3.70e-34	120
MsaG023902	AT1G69310.2	65.060	83	28	1	26	108	122	203	3.70e-34	120
MsaG023902	AT1G69310.1	65.060	83	28	1	26	108	122	203	3.70e-34	120
MsaG023902	AT2G46130.1	59.091	88	34	2	32	119	11	96	1.01e-30	106
MsaG023902	AT1G64000.1	63.415	82	29	1	27	108	90	170	1.23e-30	108
MsaG023902	AT5G41570.1	61.176	85	32	1	24	108	71	154	1.45e-30	108
MsaG023902	AT4G18170.1	60.000	95	36	2	19	112	140	233	2.90e-30	110
MsaG023902	AT5G49520.1	67.568	74	23	1	35	108	205	277	3.83e-30	111
MsaG023902	AT4G26640.5	62.338	77	28	1	32	108	186	261	1.32e-29	110
MsaG023902	AT4G26640.5	53.125	64	29	1	45	108	28	90	4.10e-15	70.5
MsaG023902	AT4G26640.6	62.338	77	28	1	32	108	186	261	1.32e-29	110
MsaG023902	AT4G26640.6	53.125	64	29	1	45	108	28	90	4.10e-15	70.5
MsaG023902	AT4G26640.4	62.338	77	28	1	32	108	186	261	1.32e-29	110
MsaG023902	AT4G26640.4	53.125	64	29	1	45	108	28	90	4.10e-15	70.5
MsaG023902	AT4G26640.3	62.338	77	28	1	32	108	186	261	1.32e-29	110
MsaG023902	AT4G26640.3	53.125	64	29	1	45	108	28	90	4.10e-15	70.5
MsaG023902	AT4G26640.7	56.044	91	35	2	32	122	322	407	2.21e-29	110
MsaG023902	AT4G26640.7	53.125	64	29	1	45	108	164	226	2.67e-15	71.2
MsaG023902	AT4G26640.1	56.044	91	35	2	32	122	290	375	2.43e-29	110
MsaG023902	AT4G26640.1	53.125	64	29	1	45	108	132	194	3.04e-15	71.2
MsaG023902	AT4G26640.2	56.044	91	35	2	32	122	362	447	2.87e-29	110
MsaG023902	AT4G26640.2	53.125	64	29	1	45	108	204	266	2.45e-15	71.2
MsaG023902	AT5G07100.2	57.647	85	35	1	24	108	114	197	7.57e-29	104
MsaG023902	AT5G07100.2	52.632	57	27	0	52	108	24	80	6.57e-15	68.6
MsaG023902	AT5G07100.4	57.647	85	35	1	24	108	114	197	7.57e-29	104
MsaG023902	AT5G07100.4	52.632	57	27	0	52	108	24	80	6.57e-15	68.6
MsaG023902	AT5G07100.5	57.647	85	35	1	24	108	114	197	7.57e-29	104
MsaG023902	AT5G07100.5	52.632	57	27	0	52	108	24	80	6.57e-15	68.6
MsaG023902	AT5G07100.3	57.647	85	35	1	24	108	114	197	7.57e-29	104
MsaG023902	AT5G07100.3	52.632	57	27	0	52	108	24	80	6.57e-15	68.6
MsaG023902	AT5G26170.1	64.000	75	26	1	38	112	100	173	1.36e-28	102
MsaG023902	AT5G07100.1	57.647	85	35	1	24	108	207	290	1.59e-28	105
MsaG023902	AT5G07100.1	52.632	57	27	0	52	108	117	173	5.87e-15	69.7
MsaG023902	AT1G69310.3	60.241	83	28	2	26	108	122	199	1.62e-28	105
MsaG023902	AT1G13960.2	61.039	77	29	1	32	108	237	312	3.80e-28	105
MsaG023902	AT1G13960.2	53.226	62	28	1	52	113	76	136	1.28e-15	72.0
MsaG023902	AT1G29860.1	64.865	74	25	1	35	108	120	192	3.96e-28	104
MsaG023902	AT2G38470.1	63.636	77	27	1	32	108	343	418	4.44e-28	107
MsaG023902	AT2G38470.1	54.386	57	25	1	52	108	184	239	1.44e-14	69.3
MsaG023902	AT1G13960.1	61.039	77	29	1	32	108	390	465	4.51e-28	107
MsaG023902	AT1G13960.1	53.226	62	28	1	52	113	229	289	5.12e-16	73.2
MsaG023902	AT2G47260.1	60.465	86	32	2	23	108	147	230	5.21e-28	105
MsaG023902	AT2G03340.1	61.039	77	29	1	32	108	396	471	6.00e-28	107
MsaG023902	AT2G03340.1	56.140	57	24	1	52	108	250	305	1.44e-14	69.3
MsaG023902	AT2G30250.1	63.636	77	27	1	32	108	309	384	6.53e-28	105
MsaG023902	AT2G30250.1	50.877	57	27	1	52	108	166	221	4.07e-12	62.0
MsaG023902	AT5G56270.1	59.036	83	32	2	27	108	462	543	1.56e-27	106
MsaG023902	AT5G56270.1	56.140	57	24	1	52	108	273	328	3.87e-16	73.6
MsaG023902	AT5G46350.1	63.636	77	26	2	37	112	169	244	2.79e-27	103
MsaG023902	AT3G01080.2	61.039	77	29	1	32	108	325	400	4.66e-27	104
MsaG023902	AT3G01080.2	56.140	57	24	1	52	108	205	260	6.19e-16	73.2
MsaG023902	AT5G13080.1	58.228	79	32	1	38	116	54	131	5.99e-27	97.8
MsaG023902	AT3G01080.1	55.056	89	35	2	24	108	275	362	6.65e-27	103
MsaG023902	AT3G01080.1	56.140	57	24	1	52	108	167	222	1.07e-15	72.4
MsaG023902	AT3G01970.1	54.444	90	37	2	38	124	52	140	8.11e-27	97.4
MsaG023902	AT2G46130.2	54.545	88	34	3	32	119	11	92	4.04e-25	92.0
MsaG023902	AT2G37260.2	62.500	64	24	0	45	108	260	323	1.06e-24	96.7
MsaG023902	AT2G37260.2	49.367	79	38	2	37	114	68	145	4.85e-15	70.1
MsaG023902	AT2G37260.3	62.500	64	24	0	45	108	262	325	1.10e-24	96.7
MsaG023902	AT2G37260.3	49.367	79	38	2	37	114	70	147	5.24e-15	70.1
MsaG023902	AT4G26440.1	58.108	74	30	1	35	108	356	428	1.92e-24	97.4
MsaG023902	AT4G26440.1	55.172	58	25	1	52	109	178	234	3.65e-17	76.6
MsaG023902	AT3G62340.1	59.524	84	31	2	25	108	94	174	1.93e-24	94.7
MsaG023902	AT2G37260.1	62.500	64	24	0	45	108	342	405	2.21e-24	96.7
MsaG023902	AT2G37260.1	49.367	79	38	2	37	114	150	227	6.64e-15	70.1
MsaG023902	AT5G64810.1	59.155	71	28	1	38	108	97	166	1.27e-23	90.9
MsaG023902	AT2G04880.2	60.000	60	24	0	49	108	280	339	2.28e-21	88.6
MsaG023902	AT2G04880.2	55.932	59	25	1	50	108	109	166	3.64e-15	70.9
MsaG023902	AT2G04880.1	60.000	60	24	0	49	108	304	363	2.90e-21	88.2
MsaG023902	AT2G04880.1	55.932	59	25	1	50	108	109	166	3.92e-15	70.9
MsaG023902	AT1G55600.1	45.882	85	46	0	24	108	279	363	5.46e-21	87.4
MsaG023902	AT2G21900.1	47.253	91	41	4	27	111	80	169	7.57e-20	81.3
MsaG023902	AT2G23320.1	42.718	103	54	2	24	125	216	314	1.79e-19	82.0
MsaG023902	AT5G43290.1	50.704	71	35	0	38	108	100	170	2.49e-19	81.3
MsaG023902	AT4G31550.2	39.024	123	64	3	4	125	207	319	5.90e-19	80.9
MsaG023902	AT4G31550.1	39.024	123	65	3	4	125	207	320	6.53e-19	80.5
MsaG023902	AT4G30935.1	54.839	62	28	0	47	108	326	387	1.32e-18	80.5
MsaG023902	AT4G31800.2	47.887	71	36	1	50	119	109	179	1.39e-18	78.6
MsaG023902	AT2G25000.2	51.667	60	28	1	51	109	102	161	1.76e-18	78.2
MsaG023902	AT2G25000.4	51.667	60	28	1	51	109	102	161	1.76e-18	78.2
MsaG023902	AT2G25000.3	53.448	58	26	1	53	109	126	183	2.33e-18	78.2
MsaG023902	AT4G31800.1	50.000	68	33	1	53	119	177	244	2.73e-18	79.0
MsaG023902	AT2G25000.1	51.667	60	28	1	51	109	145	204	3.18e-18	78.2
MsaG023902	AT5G28650.1	41.379	87	46	2	24	109	238	320	1.97e-17	76.6
MsaG023902	AT4G04450.1	43.529	85	46	2	25	108	266	349	2.30e-17	77.0
MsaG023902	AT2G30590.1	43.023	86	44	2	24	108	289	370	2.58e-17	76.6
MsaG023902	AT5G15130.2	46.250	80	41	2	31	109	165	243	3.29e-17	76.6
MsaG023902	AT5G15130.1	46.250	80	41	2	31	109	207	285	3.59e-17	76.6
MsaG023902	AT1G80840.1	46.575	73	37	2	38	108	131	203	3.84e-17	75.5
MsaG023902	AT1G62300.1	42.697	89	38	2	21	108	293	369	5.90e-17	75.9
MsaG023902	AT2G24570.1	44.186	86	43	2	24	108	219	300	9.19e-17	74.7
MsaG023902	AT3G04670.1	40.230	87	47	2	24	109	238	320	1.29e-16	74.3
MsaG023902	AT4G01720.1	51.562	64	30	1	46	108	233	296	2.17e-16	74.3
MsaG023902	AT3G01080.3	56.140	57	24	1	52	108	205	260	2.21e-16	73.9
MsaG023902	AT4G24240.1	40.230	87	47	2	24	109	257	339	4.70e-16	73.2
MsaG023902	AT1G18860.1	49.206	63	31	1	47	108	234	296	4.81e-16	73.6
MsaG023902	AT4G04450.2	38.679	106	52	2	4	108	162	255	7.96e-16	72.8
MsaG023902	AT1G68150.1	39.394	99	57	3	12	108	195	292	2.03e-15	71.2
MsaG023902	AT4G22070.4	51.562	64	30	1	46	108	291	354	4.32e-15	70.9
MsaG023902	AT4G22070.3	51.562	64	30	1	46	108	291	354	4.32e-15	70.9
MsaG023902	AT4G22070.2	51.562	64	30	1	46	108	291	354	4.32e-15	70.9
MsaG023902	AT4G22070.1	51.562	64	30	1	46	108	291	354	4.32e-15	70.9
MsaG023902	AT3G56400.1	37.349	83	43	2	34	107	96	178	6.70e-15	69.3
MsaG023902	AT1G66550.2	49.153	59	27	1	52	107	103	161	9.73e-15	68.6
MsaG023902	AT1G66550.1	49.153	59	27	1	52	107	108	166	1.19e-14	68.2
MsaG023902	AT4G01250.1	41.463	82	38	3	31	108	110	185	1.20e-14	68.9
MsaG023902	AT1G66560.1	49.153	59	27	1	52	107	103	161	1.22e-14	68.2
MsaG023902	AT1G29280.1	44.444	63	34	1	47	108	69	131	3.84e-14	67.0
MsaG023902	AT1G69810.2	44.156	77	40	3	34	108	128	203	3.87e-14	67.4
MsaG023902	AT1G69810.1	44.156	77	40	3	34	108	186	261	4.52e-14	67.8
MsaG023902	AT5G01900.1	35.366	82	50	1	29	107	87	168	6.45e-14	66.2
MsaG023902	AT5G52830.1	45.312	64	34	1	46	108	159	222	1.18e-13	66.2
MsaG023902	AT2G40740.1	45.714	70	34	2	40	106	162	230	1.72e-13	65.5
MsaG023902	AT2G40740.3	45.714	70	34	2	40	106	171	239	2.04e-13	65.5
MsaG023902	AT1G66600.1	47.458	59	28	1	51	106	102	160	2.82e-13	64.3
MsaG023902	AT4G12020.6	44.928	69	37	1	51	119	467	534	2.87e-13	65.5
MsaG023902	AT4G12020.8	44.928	69	37	1	51	119	467	534	2.87e-13	65.5
MsaG023902	AT4G23550.1	44.262	61	33	1	49	108	137	197	2.98e-13	65.1
MsaG023902	AT4G12020.5	44.928	69	37	1	51	119	400	467	3.11e-13	65.5
MsaG023902	AT4G12020.10	44.928	69	37	1	51	119	467	534	3.14e-13	65.5
MsaG023902	AT4G12020.2	44.928	69	37	1	51	119	467	534	3.14e-13	65.5
MsaG023902	AT4G12020.1	44.928	69	37	1	51	119	467	534	3.17e-13	65.5
MsaG023902	AT4G12020.9	44.928	69	37	1	51	119	467	534	3.17e-13	65.5
MsaG023902	AT4G12020.3	44.928	69	37	1	51	119	467	534	3.17e-13	65.5
MsaG023902	AT4G12020.4	44.928	69	37	1	51	119	467	534	3.17e-13	65.5
MsaG023902	AT4G12020.7	44.928	69	37	1	51	119	467	534	3.29e-13	65.5
MsaG023902	AT4G12020.11	44.928	69	37	1	51	119	467	534	3.67e-13	65.1
MsaG023902	AT2G34830.2	38.636	88	52	2	23	108	194	281	6.04e-13	64.3
MsaG023902	AT2G34830.1	38.636	88	52	2	23	108	185	272	6.61e-13	64.3
MsaG023902	AT1G30650.1	38.636	88	52	2	23	108	187	274	9.04e-13	63.9
MsaG023902	AT5G24110.1	39.759	83	38	2	50	120	111	193	1.95e-12	62.8
MsaG023902	AT5G22570.1	46.552	58	28	1	53	107	111	168	5.12e-12	61.6
MsaG023902	AT1G80590.1	44.828	58	29	1	53	107	86	143	8.12e-12	60.5
MsaG023902	AT5G45050.4	47.368	57	29	1	53	108	1042	1098	9.98e-12	61.2
MsaG023902	AT5G45050.1	47.368	57	29	1	53	108	1181	1237	1.02e-11	61.2
MsaG023902	AT5G45050.2	47.368	57	29	1	53	108	1153	1209	1.08e-11	61.2
MsaG023902	AT2G40750.1	45.763	59	29	1	52	107	152	210	1.80e-11	60.1
MsaG023902	AT2G46400.1	36.471	85	51	1	25	106	77	161	2.17e-11	59.7
MsaG023902	AT3G58710.1	45.614	57	30	1	53	108	72	128	3.27e-11	58.9
MsaG023902	AT3G58710.2	45.614	57	30	1	53	108	71	127	3.38e-11	58.9
MsaG023902	AT4G11070.2	47.541	61	29	1	52	109	109	169	3.72e-11	58.9
MsaG023902	AT4G11070.1	47.541	61	29	1	52	109	141	201	4.17e-11	58.9

Find 26 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCAATCTGACAATTTCTTA+TGG	0.303911	4:-93566825	MsaT023902.1:CDS
GATCATCATGATAATCATTT+GGG	0.314554	4:-93568002	MsaT023902.1:CDS
TTGAGAGTCTTCAAGATCAT+TGG	0.350233	4:+93566849	None:intergenic
GGTTACAAGTGGAGGAAGTA+TGG	0.371030	4:-93567873	MsaT023902.1:CDS
AGATCATCATGATAATCATT+TGG	0.374995	4:-93568003	MsaT023902.1:CDS
AATAATAGTGGTAAAAGAAA+TGG	0.401015	4:-93568029	MsaT023902.1:CDS
TATGTGGTTATTACCATCCT+TGG	0.403815	4:+93566898	None:intergenic
AGTAATTGCATGAATAATAG+TGG	0.478312	4:-93568041	None:intergenic
CATGAAAATGAAGAAAATGA+AGG	0.488233	4:-93567967	MsaT023902.1:CDS
TACATGTCTTCCTTCATATG+TGG	0.519036	4:+93566882	None:intergenic
ATGGTAATAACCACATATGA+AGG	0.520270	4:-93566892	MsaT023902.1:CDS
ATGAAAATGAAGAAAATGAA+GGG	0.532779	4:-93567966	MsaT023902.1:CDS
GATGTGGATGTGTTGGATGA+TGG	0.559861	4:-93567894	MsaT023902.1:CDS
GAAAGAAAGTGAGAGAGCCT+AGG	0.575300	4:-93567941	MsaT023902.1:CDS
GAGTCTTCAAGATCATTGGA+TGG	0.577891	4:+93566853	None:intergenic
GAGTACTGATGTGGATGTGT+TGG	0.603265	4:-93567901	MsaT023902.1:CDS
TAAAGAACACACAACATCCC+AGG	0.608791	4:-93567839	MsaT023902.1:intron
AGCGCTTAGCTGAAGATCCA+AGG	0.615258	4:-93566915	MsaT023902.1:CDS
TGGATGATGGTTACAAGTGG+AGG	0.635586	4:-93567881	MsaT023902.1:CDS
GACAATTCTCTTGTGTGCAA+CGG	0.637189	4:+93566956	None:intergenic
CTTAGCTGAAGATCCAAGGA+TGG	0.650835	4:-93566911	MsaT023902.1:CDS
ATCATCATGATAATCATTTG+GGG	0.651259	4:-93568001	MsaT023902.1:CDS
AATGTCTTGAAGCAAAACCT+AGG	0.659684	4:+93567924	None:intergenic
TGTTGGATGATGGTTACAAG+TGG	0.666245	4:-93567884	MsaT023902.1:CDS
TTGTCGTGTAAAGAAACGTG+TGG	0.671845	4:-93566938	MsaT023902.1:CDS
CAAGACATTGAGTACTGATG+TGG	0.685676	4:-93567910	MsaT023902.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	93566822	93568054	93566822	ID=MsaG023902
Chr4	mRNA	93566822	93568054	93566822	ID=MsaT023902.1;Parent=MsaG023902
Chr4	exon	93566822	93566987	93566822	ID=MsaT023902.1.exon2;Parent=MsaT023902.1
Chr4	CDS	93566822	93566987	93566822	ID=cds.MsaT023902.1;Parent=MsaT023902.1
Chr4	exon	93567840	93568054	93567840	ID=MsaT023902.1.exon1;Parent=MsaT023902.1
Chr4	CDS	93567840	93568054	93567840	ID=cds.MsaT023902.1;Parent=MsaT023902.1

Gene Sequence

>MsaT023902.1

ATGAATAATAGTGGTAAAAGAAATGGAGTAGATCATCATGATAATCATTTGGGGATTTCTGCTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACACAACATCCCAGAAGCTATTACCGTTGCACACAAGAGAATTGTCGTGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACCACATATGAAGGAAGACATGTACATTCTCCATCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG

Protein sequence

>MsaT023902.1

MNNSGKRNGVDHHDNHLGISATMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW*