AlfalfaGEDB | MsaG023972

M. sativa ssp. caerulea / MsaG023972

KEGG: -
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010500 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048449 GO:0048462 GO:0048467 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023972	XP_024627548.1	93.878	245	13	1	1	243	21	265	1.14e-144	415

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023972	sp\|Q9LXD8\|HEC3_ARATH	81.651	109	13	1	65	166	92	200	1.22e-45	155

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023972	tr\|A0A396GSG3\|A0A396GSG3_MEDTR	93.878	245	13	1	1	243	21	265	5.43e-145	415

TFs/TRs:

Gene ID	Type	Classification
MsaG023972	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000005	MsaG023972	0.861108	2.550399e-63	2.068296e-60
MsaG000219	MsaG023972	0.812605	6.704432e-51	1.220489e-48
MsaG000377	MsaG023972	0.857511	3.024852e-62	2.141873e-59
MsaG000479	MsaG023972	0.805694	1.996482e-49	3.076066e-47
MsaG000553	MsaG023972	0.829756	7.736295e-55	2.223336e-52
MsaG000545	MsaG023972	0.812233	8.076161e-51	1.456606e-48
MsaG000801	MsaG023972	0.818605	3.135232e-52	6.647211e-50
MsaG000944	MsaG023972	0.814776	2.242180e-51	4.309972e-49
MsaG001223	MsaG023972	0.821444	7.073879e-53	1.616389e-50
MsaG001307	MsaG023972	0.821270	7.757223e-53	1.764429e-50
MsaG001308	MsaG023972	0.821016	8.871034e-53	2.004299e-50
MsaG001771	MsaG023972	0.818772	2.873886e-52	6.119694e-50
MsaG001772	MsaG023972	0.826940	3.669776e-54	9.741831e-52
MsaG001828	MsaG023972	0.822942	3.190132e-53	7.588298e-51
MsaG002061	MsaG023972	0.836988	1.241297e-56	4.413651e-54
MsaG002123	MsaG023972	0.809014	3.978291e-50	6.634080e-48
MsaG002167	MsaG023972	0.813445	4.396167e-51	8.172652e-49
MsaG002290	MsaG023972	0.859103	1.020828e-62	7.671283e-60
MsaG002530	MsaG023972	0.839278	3.213991e-57	1.226562e-54
MsaG002717	MsaG023972	0.824472	1.403294e-53	3.479441e-51
MsaG002975	MsaG023972	0.840621	1.441329e-57	5.737188e-55
MsaG003089	MsaG023972	0.809674	2.875409e-50	4.871844e-48
MsaG003306	MsaG023972	0.860351	4.314997e-63	3.400858e-60
MsaG003375	MsaG023972	0.825674	7.323391e-54	1.876738e-51
MsaG003512	MsaG023972	0.806675	1.243551e-49	1.960890e-47
MsaG003517	MsaG023972	0.834987	3.972072e-56	1.329998e-53
MsaG003738	MsaG023972	0.807252	9.399544e-50	1.502432e-47
MsaG003740	MsaG023972	0.868460	1.298370e-65	1.411557e-62
MsaG003745	MsaG023972	0.848494	1.120318e-59	5.767570e-57
MsaG003880	MsaG023972	0.843033	3.349124e-58	1.439594e-55
MsaG003976	MsaG023972	0.850452	3.205957e-60	1.764715e-57
MsaG003977	MsaG023972	0.826843	3.869454e-54	1.024399e-51
MsaG004420	MsaG023972	0.829370	9.592238e-55	2.726360e-52
MsaG004444	MsaG023972	0.841749	7.305470e-58	3.013579e-55
MsaG004465	MsaG023972	0.809047	3.913983e-50	6.532161e-48
MsaG004510	MsaG023972	0.846354	4.308630e-59	2.064794e-56
MsaG004669	MsaG023972	0.814345	2.790268e-51	5.305659e-49
MsaG004685	MsaG023972	0.818766	2.883454e-52	6.139041e-50
MsaG004820	MsaG023972	0.823899	1.910901e-53	4.664696e-51
MsaG004838	MsaG023972	0.854479	2.311378e-61	1.465773e-58
MsaG005257	MsaG023972	0.849388	6.341317e-60	3.366158e-57
MsaG005574	MsaG023972	0.849789	4.906682e-60	2.640215e-57
MsaG005685	MsaG023972	0.813075	5.295363e-51	9.753617e-49
MsaG005636	MsaG023972	0.833252	1.075647e-55	3.420935e-53
MsaG005769	MsaG023972	0.817426	5.774320e-52	1.187554e-49
MsaG005881	MsaG023972	0.818215	3.838192e-52	8.055887e-50
MsaG005892	MsaG023972	0.815590	1.481286e-51	2.906548e-49
MsaG006021	MsaG023972	0.809287	3.478571e-50	5.838766e-48
MsaG006140	MsaG023972	0.847336	2.327443e-59	1.152638e-56
MsaG006156	MsaG023972	0.809253	3.538027e-50	5.933709e-48
MsaG006231	MsaG023972	0.803537	5.598425e-49	8.204632e-47
MsaG006491	MsaG023972	0.831713	2.578263e-55	7.840128e-53
MsaG006563	MsaG023972	0.865723	9.615413e-65	9.350391e-62
MsaG006640	MsaG023972	0.807954	6.682050e-50	1.086199e-47
MsaG006686	MsaG023972	0.814270	2.897772e-51	5.499717e-49
MsaG006701	MsaG023972	0.820250	1.327126e-52	2.938433e-50
MsaG006813	MsaG023972	0.817366	5.956008e-52	1.223019e-49
MsaG007015	MsaG023972	0.810842	1.614373e-50	2.814113e-48
MsaG007508	MsaG023972	0.810552	1.863856e-50	3.226089e-48
MsaG007525	MsaG023972	0.812493	7.092230e-51	1.287524e-48
MsaG007546	MsaG023972	0.853098	5.746463e-61	3.469382e-58
MsaG007610	MsaG023972	0.827107	3.348283e-54	8.929959e-52
MsaG007663	MsaG023972	0.816013	1.193448e-51	2.366983e-49
MsaG007762	MsaG023972	0.822693	3.643964e-53	8.609538e-51
MsaG008647	MsaG023972	0.807872	6.953722e-50	1.128169e-47
MsaG010004	MsaG023972	0.853636	4.034088e-61	2.482279e-58
MsaG010148	MsaG023972	0.888090	1.751618e-72	4.679055e-69
MsaG010302	MsaG023972	0.822161	4.835460e-53	1.126230e-50
MsaG010994	MsaG023972	0.814375	2.748106e-51	5.229442e-49
MsaG011043	MsaG023972	0.810217	2.199782e-50	3.776447e-48
MsaG011563	MsaG023972	0.830123	6.304092e-55	1.830873e-52
MsaG011578	MsaG023972	0.850112	3.988405e-60	2.169647e-57
MsaG011805	MsaG023972	0.804632	3.322086e-49	4.993569e-47
MsaG012385	MsaG023972	0.808894	4.219619e-50	7.016301e-48
MsaG012442	MsaG023972	0.877925	8.892260e-69	1.458370e-65
MsaG012443	MsaG023972	0.809948	2.512903e-50	4.285873e-48
MsaG012595	MsaG023972	0.801303	1.607872e-48	2.238811e-46
MsaG012747	MsaG023972	0.810810	1.640427e-50	2.857263e-48
MsaG013086	MsaG023972	0.828208	1.827348e-54	5.026369e-52
MsaG013231	MsaG023972	0.825875	6.564108e-54	1.691694e-51
MsaG013827	MsaG023972	0.838201	6.082622e-57	2.244801e-54
MsaG013810	MsaG023972	0.854941	1.700212e-61	1.096047e-58
MsaG014844	MsaG023972	0.823641	2.194851e-53	5.320804e-51
MsaG015353	MsaG023972	0.831797	2.458333e-55	7.493792e-53
MsaG015898	MsaG023972	0.867196	3.292130e-65	3.398321e-62
MsaG016390	MsaG023972	0.807581	8.010607e-50	1.290524e-47
MsaG016700	MsaG023972	0.811290	1.292321e-50	2.277585e-48
MsaG016706	MsaG023972	0.803677	5.237609e-49	7.700742e-47
MsaG017152	MsaG023972	0.802219	1.044981e-48	1.485659e-46
MsaG017261	MsaG023972	0.835049	3.833845e-56	1.286069e-53
MsaG017323	MsaG023972	0.835979	2.235373e-56	7.710478e-54
MsaG017380	MsaG023972	0.800623	2.211039e-48	3.031880e-46
MsaG017406	MsaG023972	0.840381	1.664470e-57	6.576164e-55
MsaG017469	MsaG023972	0.840047	2.033015e-57	7.948197e-55
MsaG017724	MsaG023972	0.813609	4.047069e-51	7.554560e-49
MsaG017802	MsaG023972	0.826168	5.597362e-54	1.454290e-51
MsaG017905	MsaG023972	0.856629	5.493667e-62	3.765755e-59
MsaG017957	MsaG023972	0.851652	1.476615e-60	8.472846e-58
MsaG017958	MsaG023972	0.865158	1.445277e-64	1.374209e-61
MsaG018062	MsaG023972	0.846410	4.159935e-59	1.997166e-56
MsaG018234	MsaG023972	0.802487	9.209776e-49	1.317452e-46
MsaG018368	MsaG023972	0.848785	9.311354e-60	4.841489e-57
MsaG018384	MsaG023972	0.841560	8.189806e-58	3.358377e-55
MsaG018426	MsaG023972	0.808496	5.125844e-50	8.441838e-48
MsaG018592	MsaG023972	0.801607	1.393854e-48	1.954279e-46
MsaG018783	MsaG023972	0.811023	1.475658e-50	2.583697e-48
MsaG018860	MsaG023972	0.837657	8.381481e-57	3.041796e-54
MsaG018922	MsaG023972	0.817064	6.957274e-52	1.417599e-49
MsaG019269	MsaG023972	0.824207	1.619297e-53	3.986033e-51
MsaG019290	MsaG023972	0.832026	2.159916e-55	6.628003e-53
MsaG019292	MsaG023972	0.823104	2.925422e-53	6.989059e-51
MsaG019501	MsaG023972	0.818696	2.990801e-52	6.355783e-50
MsaG019493	MsaG023972	0.834660	4.796793e-56	1.590581e-53
MsaG019616	MsaG023972	0.806498	1.354236e-49	2.126599e-47
MsaG019740	MsaG023972	0.810345	2.065119e-50	3.556550e-48
MsaG019937	MsaG023972	0.813567	4.134007e-51	7.708836e-49
MsaG020133	MsaG023972	0.826375	4.999074e-54	1.306350e-51
MsaG020206	MsaG023972	0.836719	1.452149e-56	5.121758e-54
MsaG020335	MsaG023972	0.866751	4.555725e-65	4.618768e-62
MsaG020337	MsaG023972	0.818163	3.943855e-52	8.266588e-50
MsaG020607	MsaG023972	0.851657	1.471725e-60	8.446218e-58
MsaG020593	MsaG023972	0.842915	3.598028e-58	1.540749e-55
MsaG020599	MsaG023972	0.839831	2.311778e-57	8.977045e-55
MsaG020679	MsaG023972	0.853592	4.152101e-61	2.550825e-58
MsaG020894	MsaG023972	0.847614	1.954631e-59	9.770577e-57
MsaG021001	MsaG023972	0.810747	1.692132e-50	2.942756e-48
MsaG021274	MsaG023972	0.843987	1.867199e-58	8.274824e-56
MsaG021317	MsaG023972	0.865107	1.499437e-64	1.422700e-61
MsaG021422	MsaG023972	0.837195	1.099587e-56	3.934583e-54
MsaG021816	MsaG023972	0.850142	3.913884e-60	2.131292e-57
MsaG022191	MsaG023972	0.837508	9.151029e-57	3.306107e-54
MsaG022192	MsaG023972	0.844691	1.210410e-58	5.490204e-56
MsaG022461	MsaG023972	0.829351	9.695068e-55	2.754030e-52
MsaG022554	MsaG023972	0.840870	1.241048e-57	4.978893e-55
MsaG022584	MsaG023972	0.817334	6.055375e-52	1.242399e-49
MsaG023662	MsaG023972	0.806002	1.721367e-49	2.671314e-47
MsaG023666	MsaG023972	0.813067	5.315716e-51	9.789252e-49
MsaG023852	MsaG023972	0.810793	1.653990e-50	2.879733e-48
MsaG023972	MsaG024027	0.810630	1.793599e-50	3.110320e-48
MsaG023972	MsaG024122	0.802318	9.974050e-49	1.421308e-46
MsaG023972	MsaG024144	0.850977	2.285350e-60	1.281056e-57
MsaG023972	MsaG024335	0.835663	2.685936e-56	9.177404e-54
MsaG023972	MsaG024823	0.820526	1.148431e-52	2.561179e-50
MsaG023972	MsaG025252	0.838124	6.366114e-57	2.343799e-54
MsaG023972	MsaG025864	0.816585	8.904288e-52	1.791984e-49
MsaG023972	MsaG026243	0.827873	2.198565e-54	5.990806e-52
MsaG023972	MsaG026722	0.822707	3.616760e-53	8.548607e-51
MsaG023972	MsaG026756	0.884727	3.221851e-71	7.279580e-68
MsaG023972	MsaG026770	0.830130	6.277127e-55	1.823442e-52
MsaG023972	MsaG026822	0.819338	2.140188e-52	4.625838e-50
MsaG023972	MsaG027028	0.816145	1.115447e-51	2.219853e-49
MsaG023972	MsaG027255	0.845227	8.685665e-59	4.009657e-56
MsaG023972	MsaG027285	0.867954	1.887528e-65	2.009397e-62
MsaG023972	MsaG027309	0.803439	5.866243e-49	8.577448e-47
MsaG023972	MsaG027342	0.873559	2.757024e-67	3.721443e-64
MsaG023972	MsaG027367	0.812906	5.764918e-51	1.057361e-48
MsaG023972	MsaG027495	0.800437	2.411300e-48	3.292564e-46
MsaG023972	MsaG027500	0.810791	1.656087e-50	2.883209e-48
MsaG023972	MsaG027773	0.855878	9.098070e-62	6.067250e-59
MsaG023972	MsaG027802	0.835907	2.332012e-56	8.026367e-54
MsaG023972	MsaG027929	0.841769	7.215715e-58	2.978585e-55
MsaG023972	MsaG027935	0.822224	4.677213e-53	1.091204e-50
MsaG023972	MsaG027969	0.852408	9.025403e-61	5.318673e-58
MsaG023972	MsaG027971	0.812544	6.912251e-51	1.256452e-48
MsaG023972	MsaG028003	0.835814	2.460479e-56	8.444966e-54
MsaG023972	MsaG028242	0.820775	1.006861e-52	2.260256e-50
MsaG023972	MsaG028243	0.809640	2.924669e-50	4.951218e-48
MsaG023972	MsaG028348	0.814025	3.280655e-51	6.188046e-49
MsaG023972	MsaG028553	0.832606	1.554297e-55	4.850260e-53
MsaG023972	MsaG028668	0.827611	2.538911e-54	6.867674e-52
MsaG023972	MsaG028787	0.808693	4.655037e-50	7.703236e-48
MsaG023972	MsaG028813	0.809433	3.238230e-50	5.454857e-48
MsaG023972	MsaG028830	0.807562	8.084741e-50	1.301890e-47
MsaG023972	MsaG028927	0.832156	2.006220e-55	6.179558e-53
MsaG023972	MsaG029443	0.824475	1.401362e-53	3.474928e-51
MsaG023972	MsaG029650	0.828536	1.524003e-54	4.230832e-52
MsaG023972	MsaG029892	0.864918	1.717854e-64	1.617624e-61
MsaG023972	MsaG029873	0.810148	2.276040e-50	3.900801e-48
MsaG023972	MsaG029875	0.813028	5.422565e-51	9.976143e-49
MsaG023972	MsaG030993	0.801901	1.213893e-48	1.713424e-46
MsaG023972	MsaG031022	0.844906	1.059540e-58	4.841101e-56
MsaG023972	MsaG031612	0.854222	2.739834e-61	1.721619e-58
MsaG023972	MsaG031586	0.836419	1.730261e-56	6.048136e-54
MsaG023972	MsaG031750	0.851778	1.360580e-60	7.842173e-58
MsaG023972	MsaG032331	0.840950	1.182423e-57	4.755793e-55
MsaG023972	MsaG032424	0.813383	4.535329e-51	8.418246e-49
MsaG023972	MsaG035122	0.810976	1.510692e-50	2.641966e-48
MsaG023972	MsaG035300	0.801492	1.471212e-48	2.057322e-46
MsaG023972	MsaG035531	0.802261	1.024408e-48	1.457826e-46
MsaG023972	MsaG036211	0.824542	1.351954e-53	3.358584e-51
MsaG023972	MsaG036485	0.821382	7.310137e-53	1.667636e-50
MsaG023972	MsaG036511	0.832879	1.330407e-55	4.184826e-53
MsaG023972	MsaG036954	0.850134	3.933190e-60	2.141249e-57
MsaG023972	MsaG040366	0.823523	2.337626e-53	5.648586e-51
MsaG023972	MsaG040696	0.852165	1.057341e-60	6.177727e-58
MsaG023972	MsaG041117	0.836307	1.847435e-56	6.435847e-54
MsaG023972	MsaG042750	0.808195	5.939498e-50	9.711126e-48
MsaG023972	MsaG042972	0.844748	1.168198e-58	5.308883e-56
MsaG023972	MsaG042981	0.822020	5.213771e-53	1.209740e-50
MsaG023972	MsaG044317	0.841679	7.622504e-58	3.137458e-55
MsaG023972	MsaG044707	0.846389	4.216206e-59	2.022822e-56
MsaG023972	MsaG044884	0.807609	7.904414e-50	1.274259e-47
MsaG023972	MsaG045111	0.820395	1.229879e-52	2.733458e-50
MsaG023972	MsaG045302	0.812495	7.083826e-51	1.286068e-48
MsaG023972	MsaG045261	0.804831	3.019977e-49	4.560626e-47
MsaG023972	MsaG045320	0.823301	2.633653e-53	6.325675e-51
MsaG023972	MsaG045326	0.812764	6.188521e-51	1.131042e-48
MsaG023972	MsaG045515	0.838038	6.698528e-57	2.459596e-54
MsaG023972	MsaG045582	0.843221	2.984920e-58	1.290786e-55
MsaG023972	MsaG045595	0.852975	6.227735e-61	3.743896e-58
MsaG023972	MsaG046223	0.873074	4.005966e-67	5.295159e-64
MsaG023972	MsaG046172	0.857872	2.368310e-62	1.699687e-59
MsaG023972	MsaG046181	0.871065	1.851613e-66	2.244567e-63
MsaG023972	MsaG046263	0.839963	2.137107e-57	8.333122e-55
MsaG023972	MsaG046491	0.816021	1.188777e-51	2.358204e-49
MsaG023972	MsaG046492	0.856906	4.556845e-62	3.155268e-59
MsaG023972	MsaG003008	0.873816	2.260877e-67	3.086870e-64
MsaG023972	MsaG005822	0.827183	3.211923e-54	8.584297e-52
MsaG023972	MsaG001553	0.807179	9.737747e-50	1.553856e-47
MsaG023972	MsaG002238	0.817996	4.301099e-52	8.976563e-50
MsaG023972	MsaG001632	0.835740	2.568349e-56	8.795634e-54
MsaG023972	MsaG002372	0.833594	8.850261e-56	2.843015e-53
MsaG023972	MsaG002683	0.809398	3.293729e-50	5.543577e-48
MsaG023972	MsaG001709	0.828348	1.690826e-54	4.669318e-52
MsaG023972	MsaG002776	0.813585	4.095803e-51	7.641104e-49
MsaG023972	MsaG001614	0.864811	1.855521e-64	1.739897e-61
MsaG023972	MsaG008213	0.833102	1.172116e-55	3.711343e-53
MsaG023972	MsaG007899	0.844226	1.612143e-58	7.201708e-56
MsaG023972	MsaG013515	0.817646	5.154908e-52	1.066108e-49
MsaG023972	MsaG011720	0.842279	5.299835e-58	2.223593e-55
MsaG023972	MsaG014174	0.817375	5.928595e-52	1.217673e-49
MsaG023972	MsaG019481	0.811106	1.416044e-50	2.484380e-48
MsaG023972	MsaG020251	0.808245	5.796741e-50	9.489269e-48
MsaG023972	MsaG027071	0.857694	2.672109e-62	1.904963e-59
MsaG023972	MsaG027837	0.861266	2.283507e-63	1.863075e-60
MsaG023972	MsaG032588	0.877501	1.248447e-68	2.008437e-65
MsaG023972	MsaG031608	0.839736	2.447773e-57	9.476446e-55
MsaG023972	MsaG034393	0.827174	3.227721e-54	8.624366e-52
MsaG023972	MsaG032019	0.826829	3.899337e-54	1.031904e-51
MsaG023972	MsaG032681	0.861473	1.976040e-63	1.625001e-60
MsaG023972	MsaG034035	0.801479	1.480504e-48	2.069714e-46
MsaG023972	MsaG031589	0.865669	9.995854e-65	9.698689e-62
MsaG023972	MsaG033091	0.835018	3.902354e-56	1.307877e-53
MsaG023972	MsaG031725	0.808364	5.469855e-50	8.979403e-48
MsaG023972	MsaG034413	0.814849	2.160145e-51	4.159873e-49
MsaG023972	MsaG034268	0.858596	1.445066e-62	1.065424e-59
MsaG023972	MsaG031297	0.802708	8.293873e-49	1.192430e-46
MsaG023972	MsaG034266	0.816589	8.882993e-52	1.787906e-49
MsaG023972	MsaG031897	0.808141	6.097122e-50	9.955940e-48
MsaG023972	MsaG040050	0.819853	1.634735e-52	3.581271e-50
MsaG023972	MsaG037487	0.815617	1.461143e-51	2.869020e-49
MsaG023972	MsaG036566	0.838830	4.194172e-57	1.578572e-54
MsaG023972	MsaG037652	0.818930	2.648031e-52	5.662191e-50
MsaG023972	MsaG035337	0.809450	3.211312e-50	5.411861e-48
MsaG023972	MsaG035309	0.863789	3.854691e-64	3.470373e-61
MsaG023972	MsaG041722	0.876969	1.908456e-68	2.997134e-65
MsaG023972	MsaG043789	0.857858	2.391052e-62	1.715099e-59
MsaG023972	MsaG043527	0.864233	2.807598e-64	2.572686e-61
MsaG023972	MsaG042308	0.898710	9.289138e-77	4.406721e-73
MsaG023972	MsaG044878	0.823112	2.913472e-53	6.962017e-51
MsaG023972	MsaG042389	0.870816	2.234748e-66	2.680646e-63
MsaG023972	MsaG042526	0.809414	3.268891e-50	5.503886e-48
MsaG023972	MsaG043234	0.809161	3.701529e-50	6.194345e-48
MsaG023972	MsaG041796	0.833970	7.131718e-56	2.316394e-53
MsaG023972	MsaG041547	0.801828	1.256268e-48	1.770271e-46
MsaG023972	MsaG043778	0.853992	3.189636e-61	1.987880e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023972	MtrunA17_Chr8g0384141	93.878	245	13	1	1	243	21	265	1.05e-148	415
MsaG023972	MtrunA17_Chr3g0134001	73.958	96	25	0	60	155	139	234	4.44e-47	157
MsaG023972	MtrunA17_Chr8g0375121	68.571	105	33	0	60	164	100	204	4.53e-38	133
MsaG023972	MtrunA17_Chr5g0402161	64.545	110	39	0	60	169	105	214	1.01e-37	132
MsaG023972	MtrunA17_Chr8g0341421	60.577	104	36	2	58	156	289	392	5.51e-29	113
MsaG023972	MtrunA17_Chr2g0330641	62.105	95	35	1	63	156	260	354	6.39e-27	107
MsaG023972	MtrunA17_Chr7g0243041	67.857	56	18	0	98	153	32	87	9.73e-21	85.5
MsaG023972	MtrunA17_Chr5g0435021	45.455	99	52	2	58	154	182	280	1.39e-19	85.9
MsaG023972	MtrunA17_Chr1g0152651	66.071	56	19	0	101	156	283	338	5.78e-19	84.7
MsaG023972	MtrunA17_Chr5g0393721	66.071	56	19	0	101	156	233	288	5.99e-19	84.3
MsaG023972	MtrunA17_Chr1g0207301	41.176	102	59	1	56	156	251	352	1.23e-18	84.0
MsaG023972	MtrunA17_Chr1g0207311	66.071	56	19	0	101	156	205	260	2.05e-18	82.0
MsaG023972	MtrunA17_Chr3g0134741	60.606	66	25	1	92	156	228	293	5.10e-18	81.6
MsaG023972	MtrunA17_Chr4g0074161	50.667	75	37	0	80	154	194	268	1.43e-15	75.1
MsaG023972	MtrunA17_Chr1g0179061	59.259	54	22	0	102	155	180	233	2.01e-14	70.5
MsaG023972	MtrunA17_Chr1g0190731	50.000	70	35	0	85	154	186	255	1.33e-13	69.3
MsaG023972	MtrunA17_Chr2g0311101	44.737	76	40	1	82	155	157	232	1.79e-13	68.6
MsaG023972	MtrunA17_Chr2g0323091	52.632	57	27	0	102	158	146	202	2.24e-13	68.2
MsaG023972	MtrunA17_Chr4g0014771	59.259	54	21	1	102	154	128	181	2.12e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG023972	AT5G09750.1	81.651	109	13	1	65	166	92	200	1.25e-46	155
MsaG023972	AT4G00120.1	82.022	89	16	0	67	155	87	175	2.16e-46	153
MsaG023972	AT3G21330.1	52.632	133	56	1	56	188	233	358	7.68e-38	136
MsaG023972	AT5G67060.2	75.824	91	22	0	65	155	83	173	4.25e-36	128
MsaG023972	AT5G67060.1	75.824	91	22	0	65	155	95	185	6.44e-36	127
MsaG023972	AT3G50330.1	74.725	91	23	0	65	155	92	182	2.04e-35	126
MsaG023972	AT5G01305.1	64.179	67	24	0	90	156	35	101	3.75e-21	87.4
MsaG023972	AT2G14760.1	67.857	56	18	0	101	156	246	301	6.19e-19	84.7
MsaG023972	AT5G43175.1	47.500	80	42	0	77	156	117	196	6.65e-19	82.8
MsaG023972	AT4G33880.1	67.857	56	18	0	101	156	275	330	7.04e-19	84.7
MsaG023972	AT1G27740.1	50.704	71	35	0	86	156	161	231	1.13e-17	80.1
MsaG023972	AT1G66470.1	64.815	54	19	0	101	154	204	257	1.33e-17	80.5
MsaG023972	AT5G37800.1	52.778	72	26	1	83	154	200	263	1.65e-17	80.5
MsaG023972	AT4G30980.1	59.091	66	26	1	90	154	127	192	1.94e-16	77.4
MsaG023972	AT4G30980.2	59.091	66	26	1	90	154	175	240	3.98e-16	77.0
MsaG023972	AT2G24260.2	62.963	54	20	0	101	154	44	97	4.55e-16	75.5
MsaG023972	AT2G24260.1	49.333	75	32	1	86	154	126	200	9.26e-16	75.9
MsaG023972	AT2G14760.3	55.072	69	18	1	101	156	246	314	1.46e-15	75.1
MsaG023972	AT5G58010.1	52.113	71	33	1	85	154	91	161	5.43e-15	73.2

Find 52 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTATGAATTCTTCTGGAATT+TGG	0.166878	4:+94319382	MsaT023972.1:CDS
GGTTCACTCAGTGACATATT+AGG	0.250977	4:+94319456	MsaT023972.1:CDS
TTGTTATTGTCTCCTTCTTC+TGG	0.266342	4:+94319873	MsaT023972.1:CDS
TGTTCCTGGTGGAACTAAAA+TGG	0.289003	4:+94319698	MsaT023972.1:CDS
CAAGTTCCTATGAATTCTTC+TGG	0.298023	4:+94319375	MsaT023972.1:CDS
ATCATGCTGTTGTAGCTATT+TGG	0.316175	4:-94319408	None:intergenic
CTTCTTCTGGTTGTGACGTC+TGG	0.336110	4:+94319886	MsaT023972.1:CDS
GTGGAAGTGAGTAGTAAATT+TGG	0.351622	4:-94319918	None:intergenic
ATTCGAACGTTTCTTCGCTT+TGG	0.353088	4:-94319597	None:intergenic
TGTCTAGCTGCAACACTTTG+TGG	0.381712	4:-94319630	None:intergenic
ATCCTTCAAAGACTTGTTCC+TGG	0.399593	4:+94319684	MsaT023972.1:CDS
GAAGAACAAGAAGAAGAGTT+AGG	0.401481	4:+94319501	MsaT023972.1:CDS
AGAAGAGTTAGGAGCTATGA+AGG	0.405429	4:+94319512	MsaT023972.1:CDS
GTTCACTCAGTGACATATTA+GGG	0.414540	4:+94319457	MsaT023972.1:CDS
GATCTTGTTGGAGAATAATA+CGG	0.432514	4:-94319347	None:intergenic
AGTAGTAAATTTGGTGCAAA+AGG	0.442540	4:-94319909	None:intergenic
GTTCTTCTACATCTTCGATT+CGG	0.446833	4:-94319485	None:intergenic
TCCGGCGTCAAATTGAATTC+CGG	0.450878	4:-94319967	None:intergenic
CAAATTCCAGAAGAATTCAT+AGG	0.451806	4:-94319381	None:intergenic
CAGAAGAATTCATAGGAACT+TGG	0.471897	4:-94319374	None:intergenic
CACCAGGAACAAGTCTTTGA+AGG	0.481487	4:-94319686	None:intergenic
GAACTTGGTGGTGATCTTGT+TGG	0.483925	4:-94319359	None:intergenic
CTTCTACATCTTCGATTCGG+TGG	0.493447	4:-94319482	None:intergenic
CAAGATTGCAGCTATGCAAC+CGG	0.495861	4:+94319545	MsaT023972.1:CDS
GCACCACCACCACCTTCATC+AGG	0.499844	4:+94319435	MsaT023972.1:CDS
GTCCACTGTGGCAGCTGTTG+TGG	0.509617	4:-94319937	None:intergenic
CAGACGTCACAACCAGAAGA+AGG	0.532660	4:-94319885	None:intergenic
TAGCTACAACAGCATGATCA+TGG	0.539866	4:+94319413	MsaT023972.1:CDS
ATGCTGTTGTAGCTATTTGG+TGG	0.542016	4:-94319405	None:intergenic
GAACCTGATGAAGGTGGTGG+TGG	0.552409	4:-94319438	None:intergenic
ATGAACATGTGAATGTCCTC+CGG	0.556908	4:-94319985	None:intergenic
GGCGTCAAATTGAATTCCGG+TGG	0.574382	4:-94319964	None:intergenic
CAAGAACTTAACATAACGAA+TGG	0.583966	4:-94319745	None:intergenic
TCACATGTTCATGCTTGTGA+AGG	0.591006	4:+94319996	MsaT023972.1:CDS
GCCACAGTGGACTTACCCAC+CGG	0.591865	4:+94319948	MsaT023972.1:CDS
AAGAATTCATAGGAACTTGG+TGG	0.592411	4:-94319371	None:intergenic
ACTCACTAATTACCTCATGA+TGG	0.592814	4:-94320034	None:intergenic
GACAATAACAAAGCACTAGG+AGG	0.606861	4:-94319861	None:intergenic
GGAGACAATAACAAAGCACT+AGG	0.609214	4:-94319864	None:intergenic
GGAATTCAATTTGACGCCGG+AGG	0.622262	4:+94319969	MsaT023972.1:CDS
CTTCAAAGACTTGTTCCTGG+TGG	0.627271	4:+94319687	MsaT023972.1:CDS
GTTGCTGGGTCGATATCCAC+CGG	0.629556	4:-94319564	None:intergenic
ACCGGAATTCAATTTGACGC+CGG	0.643580	4:+94319966	MsaT023972.1:CDS
ATCAAGCTTTAACCATCATG+AGG	0.658321	4:+94320022	MsaT023972.1:CDS
TTAATGCATTGTGATGAAAG+TGG	0.662271	4:-94319831	None:intergenic
TCACTGAGTGAACCTGATGA+AGG	0.669394	4:-94319447	None:intergenic
GATTGCAGCTATGCAACCGG+TGG	0.671341	4:+94319548	MsaT023972.1:CDS
GCGTCAAATTGAATTCCGGT+GGG	0.674022	4:-94319963	None:intergenic
TTCCACAACAGCTGCCACAG+TGG	0.676021	4:+94319935	MsaT023972.1:CDS
AGTGAACCTGATGAAGGTGG+TGG	0.679836	4:-94319441	None:intergenic
CTGAGTGAACCTGATGAAGG+TGG	0.711599	4:-94319444	None:intergenic
TCCGGTGGGTAAGTCCACTG+TGG	0.759981	4:-94319949	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	94319327	94320058	94319327	ID=MsaG023972
Chr4	mRNA	94319327	94320058	94319327	ID=MsaT023972.1;Parent=MsaG023972
Chr4	exon	94319327	94320058	94319327	ID=MsaT023972.1.exon1;Parent=MsaT023972.1
Chr4	CDS	94319327	94320058	94319327	ID=cds.MsaT023972.1;Parent=MsaT023972.1

Gene Sequence

>MsaT023972.1

ATGGAAACAAATGAACAAAACCGTATTATTCTCCAACAAGATCACCACCAAGTTCCTATGAATTCTTCTGGAATTTGGCCACCAAATAGCTACAACAGCATGATCATGGCACCACCACCACCTTCATCAGGTTCACTCAGTGACATATTAGGGATCCACCGAATCGAAGATGTAGAAGAACAAGAAGAAGAGTTAGGAGCTATGAAGGAAATGATGTACAAGATTGCAGCTATGCAACCGGTGGATATCGACCCAGCAACGATTCGAAAACCAAAGCGAAGAAACGTTCGAATCAGCGACGATCCACAAAGTGTTGCAGCTAGACATAGAAGAGAAAGAATCAGTGAGAAGATTCGTATCCTTCAAAGACTTGTTCCTGGTGGAACTAAAATGGATACAGCTTCTATGCTTGATGAAGCCATTCGTTATGTTAAGTTCTTGAAGAGACAAATCAAGTTGCTTCAATCCACTCCTCAAAATCAACAACAACAACACATTCAATTGCCACTTTCATCACAATGCATTAATTCTACTCCTCCTAGTGCTTTGTTATTGTCTCCTTCTTCTGGTTGTGACGTCTGGCCTTTTGCACCAAATTTACTACTCACTTCCACAACAGCTGCCACAGTGGACTTACCCACCGGAATTCAATTTGACGCCGGAGGACATTCACATGTTCATGCTTGTGAAGGCTCATCAAGCTTTAACCATCATGAGGTAATTAGTGAGTGA

Protein sequence

>MsaT023972.1

METNEQNRIILQQDHHQVPMNSSGIWPPNSYNSMIMAPPPPSSGSLSDILGIHRIEDVEEQEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLLQSTPQNQQQQHIQLPLSSQCINSTPPSALLLSPSSGCDVWPFAPNLLLTSTTAATVDLPTGIQFDAGGHSHVHACEGSSSFNHHEVISE*