AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG024065

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG024065 MtrunA17_Chr8g0385321 89.557 316 29 2 1 316 1 312 4.89e-174 484
MsaG024065 MtrunA17_Chr3g0131121 49.026 308 98 7 1 282 1 275 5.75e-89 268
MsaG024065 MtrunA17_Chr4g0037141 47.022 319 124 9 1 312 1 281 2.52e-86 261
MsaG024065 MtrunA17_Chr5g0435101 61.644 146 51 1 3 148 2 142 6.92e-66 206
MsaG024065 MtrunA17_Chr7g0270891 57.862 159 67 0 1 159 1 159 9.12e-65 208
MsaG024065 MtrunA17_Chr4g0058631 42.629 251 118 3 1 225 1 251 2.02e-64 207
MsaG024065 MtrunA17_Chr1g0193371 68.217 129 41 0 1 129 1 129 6.30e-64 206
MsaG024065 MtrunA17_Chr1g0193801 52.247 178 78 1 1 178 1 171 1.19e-63 206
MsaG024065 MtrunA17_Chr4g0048511 66.667 129 42 1 1 128 1 129 2.13e-63 204
MsaG024065 MtrunA17_Chr2g0281071 67.442 129 41 1 1 128 1 129 3.84e-63 203
MsaG024065 MtrunA17_Chr2g0323411 67.969 128 41 0 1 128 1 128 7.61e-63 202
MsaG024065 MtrunA17_Chr3g0115821 63.636 132 48 0 1 132 1 132 8.10e-63 202
MsaG024065 MtrunA17_Chr4g0039971 66.406 128 43 0 1 128 2 129 1.14e-62 202
MsaG024065 MtrunA17_Chr4g0042671 49.746 197 96 1 1 197 1 194 2.43e-62 203
MsaG024065 MtrunA17_Chr7g0217741 65.625 128 44 0 1 128 1 128 2.57e-62 200
MsaG024065 MtrunA17_Chr4g0057031 65.891 129 44 0 1 129 1 129 6.01e-62 198
MsaG024065 MtrunA17_Chr5g0410961 66.406 128 43 0 1 128 1 128 1.34e-61 199
MsaG024065 MtrunA17_Chr3g0117091 65.891 129 44 0 1 129 1 129 1.82e-61 199
MsaG024065 MtrunA17_Chr8g0349261 57.233 159 66 2 1 157 1 159 2.78e-61 197
MsaG024065 MtrunA17_Chr5g0434571 62.590 139 51 1 1 139 37 174 7.94e-61 197
MsaG024065 MtrunA17_Chr1g0211161 55.414 157 59 1 3 159 4 149 8.66e-61 193
MsaG024065 MtrunA17_Chr3g0110351 61.268 142 52 1 1 142 1 139 4.57e-60 194
MsaG024065 MtrunA17_Chr6g0453471 55.346 159 69 1 1 157 1 159 7.66e-60 195
MsaG024065 MtrunA17_Chr7g0271241 68.217 129 41 0 1 129 1 129 9.84e-60 196
MsaG024065 MtrunA17_Chr4g0044421 64.000 125 44 1 3 126 2 126 3.25e-59 188
MsaG024065 MtrunA17_Chr7g0228891 44.776 201 103 2 1 199 1 195 1.00e-58 189
MsaG024065 MtrunA17_Chr3g0121241 48.947 190 88 2 5 185 35 224 1.74e-58 190
MsaG024065 MtrunA17_Chr1g0187761 58.278 151 59 1 1 151 1 147 3.45e-58 187
MsaG024065 MtrunA17_Chr1g0203411 67.241 116 38 0 1 116 1 116 9.55e-58 188
MsaG024065 MtrunA17_Chr8g0342541 52.469 162 73 1 1 162 1 158 1.44e-57 189
MsaG024065 MtrunA17_Chr2g0330041 59.859 142 54 1 1 142 1 139 4.03e-57 189
MsaG024065 MtrunA17_Chr8g0342521 53.704 162 67 2 1 162 1 154 6.36e-57 187
MsaG024065 MtrunA17_Chr5g0395281 60.938 128 50 0 1 128 1 128 1.24e-56 185
MsaG024065 MtrunA17_Chr4g0068061 68.376 117 37 0 1 117 1 117 1.45e-56 186
MsaG024065 MtrunA17_Chr7g0275911 51.786 168 80 1 1 167 1 168 2.17e-56 183
MsaG024065 MtrunA17_Chr3g0103281 54.902 153 68 1 1 153 1 152 2.73e-56 185
MsaG024065 MtrunA17_Chr1g0167691 55.333 150 67 0 1 150 1 150 3.50e-56 182
MsaG024065 MtrunA17_Chr2g0309911 62.903 124 46 0 6 129 5 128 9.94e-56 183
MsaG024065 MtrunA17_Chr4g0070611 66.379 116 39 0 1 116 1 116 1.32e-55 182
MsaG024065 MtrunA17_Chr6g0452271 52.980 151 68 1 1 151 1 148 1.47e-55 183
MsaG024065 MtrunA17_Chr4g0070641 66.379 116 39 0 1 116 1 116 2.18e-55 177
MsaG024065 MtrunA17_Chr8g0346561 66.379 116 39 0 1 116 1 116 2.89e-55 181
MsaG024065 MtrunA17_Chr1g0167661 53.247 154 71 1 1 154 1 153 3.78e-54 177
MsaG024065 MtrunA17_Chr7g0274581 55.862 145 63 1 1 145 1 144 3.89e-54 176
MsaG024065 MtrunA17_Chr7g0261281 65.517 116 40 0 1 116 1 116 1.30e-53 177
MsaG024065 MtrunA17_Chr8g0387421 64.655 116 41 0 1 116 1 116 1.67e-53 177
MsaG024065 MtrunA17_Chr8g0342481 51.534 163 73 2 1 162 1 158 4.46e-53 179
MsaG024065 MtrunA17_Chr1g0194951 62.500 128 48 0 1 128 1 128 5.39e-53 178
MsaG024065 MtrunA17_Chr7g0269831 64.662 133 46 1 1 132 1 133 1.63e-52 176
MsaG024065 MtrunA17_Chr5g0397231 66.364 110 37 0 1 110 1 110 9.69e-52 174
MsaG024065 MtrunA17_Chr4g0022881 64.035 114 41 0 1 114 1 114 2.00e-51 169
MsaG024065 MtrunA17_Chr2g0311221 67.273 110 36 0 2 111 4 113 1.78e-50 170
MsaG024065 MtrunA17_Chr4g0060721 62.069 116 44 0 1 116 2 117 2.53e-50 170
MsaG024065 MtrunA17_Chr2g0323351 62.069 116 44 0 1 116 1 116 4.43e-50 167
MsaG024065 MtrunA17_Chr3g0135311 39.744 234 130 3 1 226 1 231 4.71e-50 169
MsaG024065 MtrunA17_Chr4g0022931 50.000 158 67 2 1 146 1 158 5.66e-50 167
MsaG024065 MtrunA17_Chr4g0022891 55.882 136 56 1 1 132 1 136 6.50e-50 166
MsaG024065 MtrunA17_Chr7g0217221 59.483 116 47 0 1 116 1 116 7.27e-50 167
MsaG024065 MtrunA17_Chr2g0328771 66.990 103 34 0 14 116 22 124 7.35e-50 168
MsaG024065 MtrunA17_Chr1g0151941 57.983 119 49 1 1 118 1 119 7.86e-50 166
MsaG024065 MtrunA17_Chr5g0417821 64.348 115 41 0 14 128 9 123 9.29e-50 167
MsaG024065 MtrunA17_Chr7g0254411 58.730 126 50 1 1 124 1 126 1.34e-49 168
MsaG024065 MtrunA17_Chr5g0400821 44.286 210 97 5 1 197 1 203 1.87e-49 167
MsaG024065 MtrunA17_Chr4g0032401 66.990 103 34 0 14 116 19 121 4.69e-49 166
MsaG024065 MtrunA17_Chr4g0028311 57.252 131 54 2 1 130 1 130 6.13e-49 166
MsaG024065 MtrunA17_Chr4g0022901 55.882 136 54 3 1 134 1 132 6.29e-49 164
MsaG024065 MtrunA17_Chr1g0152011 48.750 160 81 1 1 159 1 160 1.63e-48 165
MsaG024065 MtrunA17_Chr4g0022911 59.483 116 46 1 1 115 1 116 2.63e-48 163
MsaG024065 MtrunA17_Chr1g0203441 56.489 131 55 2 1 130 1 130 3.19e-48 162
MsaG024065 MtrunA17_Chr7g0264641 58.824 119 48 1 1 118 1 119 7.93e-48 161
MsaG024065 MtrunA17_Chr3g0092401 59.483 116 47 0 1 116 2 117 1.16e-47 162
MsaG024065 MtrunA17_Chr3g0088461 62.963 108 40 0 9 116 19 126 2.67e-47 162
MsaG024065 MtrunA17_Chr6g0470971 44.809 183 87 3 7 186 9 180 7.20e-47 159
MsaG024065 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 2.40e-46 159
MsaG024065 MtrunA17_Chr7g0228231 61.017 118 44 1 1 116 1 118 1.13e-45 154
MsaG024065 MtrunA17_Chr6g0450101 61.017 118 44 1 1 116 1 118 1.57e-45 154
MsaG024065 MtrunA17_Chr6g0453211 57.658 111 47 0 1 111 1 111 4.81e-45 155
MsaG024065 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 6.15e-45 154
MsaG024065 MtrunA17_Chr6g0487491 47.742 155 70 4 1 146 1 153 3.97e-44 152
MsaG024065 MtrunA17_Chr4g0072751 61.261 111 42 1 1 110 1 111 9.34e-44 153
MsaG024065 MtrunA17_Chr1g0186061 61.111 108 42 0 8 115 16 123 1.13e-43 150
MsaG024065 MtrunA17_Chr4g0055981 44.304 158 88 0 9 166 52 209 1.92e-43 149
MsaG024065 MtrunA17_Chr8g0343831 56.897 116 46 1 1 116 1 112 2.19e-43 149
MsaG024065 MtrunA17_Chr7g0247131 67.778 90 29 0 44 133 10 99 2.53e-43 150
MsaG024065 MtrunA17_Chr1g0168661 59.091 110 45 0 6 115 15 124 4.25e-43 149
MsaG024065 MtrunA17_Chr8g0354661 63.725 102 37 0 14 115 39 140 5.58e-43 155
MsaG024065 MtrunA17_Chr1g0209661 56.522 115 50 0 8 122 23 137 6.95e-43 150
MsaG024065 MtrunA17_Chr3g0099131 62.745 102 38 0 14 115 43 144 1.69e-42 154
MsaG024065 MtrunA17_Chr7g0240821 47.059 153 78 2 16 165 5 157 3.15e-42 145
MsaG024065 MtrunA17_Chr1g0180391 61.165 103 40 0 14 116 21 123 1.45e-41 144
MsaG024065 MtrunA17_Chr1g0194301 52.101 119 57 0 14 132 35 153 1.25e-40 143
MsaG024065 MtrunA17_Chr1g0194291 61.765 102 39 0 14 115 23 124 2.11e-40 142
MsaG024065 MtrunA17_Chr3g0080861 57.843 102 43 0 14 115 39 140 6.08e-40 146
MsaG024065 MtrunA17_Chr5g0434931 42.308 156 85 1 14 169 37 187 7.50e-39 138
MsaG024065 MtrunA17_Chr7g0220341 42.331 163 87 3 14 174 27 184 7.80e-39 138
MsaG024065 MtrunA17_Chr8g0342511 65.517 87 30 0 1 87 1 87 8.31e-39 132
MsaG024065 MtrunA17_Chr4g0042611 63.636 88 32 0 1 88 1 88 1.14e-38 132
MsaG024065 MtrunA17_Chr1g0154031 59.804 102 41 0 14 115 78 179 1.14e-38 141
MsaG024065 MtrunA17_Chr5g0434911 50.442 113 56 0 7 119 16 128 1.36e-38 137
MsaG024065 MtrunA17_Chr2g0294811 64.773 88 31 0 1 88 1 88 2.13e-38 132
MsaG024065 MtrunA17_Chr1g0192411 51.667 120 52 1 14 127 14 133 3.50e-38 140
MsaG024065 MtrunA17_Chr5g0434831 53.774 106 49 0 14 119 9 114 4.02e-38 134
MsaG024065 MtrunA17_Chr2g0327821 42.953 149 79 2 9 154 3 148 6.48e-38 134
MsaG024065 MtrunA17_Chr2g0293911 62.376 101 38 0 14 114 26 126 4.48e-37 135
MsaG024065 MtrunA17_Chr8g0342531 61.798 89 34 0 1 89 1 89 5.79e-37 130
MsaG024065 MtrunA17_Chr4g0068921 61.386 101 39 0 14 114 26 126 1.01e-36 130
MsaG024065 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 1.11e-36 128
MsaG024065 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 2.32e-36 127
MsaG024065 MtrunA17_Chr7g0228991 53.774 106 49 0 14 119 31 136 2.84e-36 131
MsaG024065 MtrunA17_Chr4g0030881 51.351 111 47 1 12 115 7 117 7.52e-36 130
MsaG024065 MtrunA17_Chr2g0322521 58.824 102 42 0 14 115 31 132 1.18e-35 132
MsaG024065 MtrunA17_Chr5g0434841 52.830 106 50 0 14 119 22 127 3.72e-35 129
MsaG024065 MtrunA17_Chr5g0440781 52.212 113 52 2 12 123 12 123 4.01e-35 126
MsaG024065 MtrunA17_Chr5g0440761 52.212 113 52 2 12 123 12 123 9.19e-35 127
MsaG024065 MtrunA17_Chr5g0441141 52.212 113 52 2 12 123 12 123 1.30e-34 127
MsaG024065 MtrunA17_Chr8g0360111 54.545 99 45 0 14 112 27 125 1.46e-34 126
MsaG024065 MtrunA17_Chr8g0334881 50.000 108 53 1 8 114 6 113 1.41e-32 123
MsaG024065 MtrunA17_Chr2g0323321 56.522 92 39 1 1 92 1 91 1.71e-32 116
MsaG024065 MtrunA17_Chr5g0395221 57.955 88 37 0 1 88 1 88 3.72e-32 115
MsaG024065 MtrunA17_Chr5g0401731 44.872 156 84 2 14 169 15 168 1.72e-31 120
MsaG024065 MtrunA17_Chr4g0008551 40.437 183 97 4 14 195 38 209 3.30e-31 120
MsaG024065 MtrunA17_Chr5g0441131 50.442 113 54 2 12 123 9 120 6.83e-31 115
MsaG024065 MtrunA17_Chr4g0013361 45.528 123 64 2 8 127 6 128 2.86e-30 116
MsaG024065 MtrunA17_Chr5g0429661 47.170 106 54 2 14 119 122 225 2.52e-29 115
MsaG024065 MtrunA17_Chr3g0099141 56.250 80 35 0 14 93 42 121 5.00e-29 108
MsaG024065 MtrunA17_Chr3g0093811 53.933 89 41 0 44 132 14 102 1.14e-28 111
MsaG024065 MtrunA17_Chr4g0053431 45.070 142 68 3 14 149 5 142 2.39e-28 110
MsaG024065 MtrunA17_Chr6g0454921 37.624 202 112 6 14 213 15 204 4.62e-28 108
MsaG024065 MtrunA17_Chr7g0229101 60.000 70 28 0 44 113 4 73 8.69e-27 104
MsaG024065 MtrunA17_Chr4g0058991 48.598 107 51 3 14 119 209 312 2.34e-26 108
MsaG024065 MtrunA17_Chr3g0133601 50.000 102 50 1 14 115 37 137 2.52e-26 103
MsaG024065 MtrunA17_Chr3g0117511 32.979 188 100 5 3 167 170 354 5.93e-26 107
MsaG024065 MtrunA17_Chr7g0238631 44.860 107 50 2 14 116 113 214 9.16e-26 107
MsaG024065 MtrunA17_Chr5g0437321 49.495 99 49 1 14 112 19 116 3.38e-25 102
MsaG024065 MtrunA17_Chr7g0229131 52.778 72 34 0 45 116 5 76 6.69e-25 98.6
MsaG024065 MtrunA17_Chr3g0139671 42.857 105 59 1 14 118 85 188 2.12e-24 103
MsaG024065 MtrunA17_Chr7g0228531 44.643 112 56 3 8 115 210 319 2.16e-24 102
MsaG024065 MtrunA17_Chr5g0434901 57.353 68 29 0 46 113 7 74 2.46e-24 95.5
MsaG024065 MtrunA17_Chr1g0157731 43.810 105 58 1 14 118 91 194 4.33e-24 102
MsaG024065 MtrunA17_Chr6g0480581 40.650 123 62 4 14 129 4 122 9.20e-24 97.4
MsaG024065 MtrunA17_Chr5g0425591 49.412 85 42 1 12 95 9 93 1.97e-23 92.4
MsaG024065 MtrunA17_Chr7g0228401 33.333 204 119 6 25 228 290 476 6.15e-23 99.0
MsaG024065 MtrunA17_Chr5g0397841 45.833 96 51 1 14 109 110 204 7.25e-22 95.5
MsaG024065 MtrunA17_Chr6g0453751 48.315 89 37 2 14 93 22 110 7.85e-22 89.4
MsaG024065 MtrunA17_Chr3g0125801 45.098 102 55 1 14 115 16 116 2.49e-21 92.0
MsaG024065 MtrunA17_Chr1g0177901 45.652 92 48 2 25 116 5 94 3.01e-21 90.1
MsaG024065 MtrunA17_Chr5g0417621 41.748 103 59 1 14 116 134 235 3.62e-21 93.6
MsaG024065 MtrunA17_Chr4g0042501 41.176 102 59 1 14 115 105 205 3.85e-21 93.2
MsaG024065 MtrunA17_Chr6g0460661 39.175 97 58 1 14 110 16 111 9.13e-21 87.4
MsaG024065 MtrunA17_Chr7g0238651 31.443 194 107 5 13 182 6 197 1.31e-20 90.9
MsaG024065 MtrunA17_Chr7g0254261 32.984 191 112 5 1 182 81 264 3.50e-20 89.7
MsaG024065 MtrunA17_Chr7g0228481 40.000 120 63 4 8 120 210 327 3.74e-20 90.5
MsaG024065 MtrunA17_Chr6g0460671 33.333 156 101 2 14 169 99 251 5.65e-20 89.0
MsaG024065 MtrunA17_Chr7g0233061 42.342 111 48 4 12 116 178 278 3.45e-19 87.0
MsaG024065 MtrunA17_Chr3g0145551 60.784 51 20 0 91 141 1 51 2.67e-16 72.8
MsaG024065 MtrunA17_Chr1g0193901 57.692 52 22 0 17 68 17 68 1.99e-15 71.2
MsaG024065 MtrunA17_Chr1g0193891 57.692 52 22 0 17 68 17 68 1.99e-15 71.2
MsaG024065 MtrunA17_Chr1g0193871 57.692 52 22 0 17 68 17 68 1.99e-15 71.2
MsaG024065 MtrunA17_Chr1g0193881 57.692 52 22 0 17 68 17 68 1.99e-15 71.2
MsaG024065 MtrunA17_Chr5g0395231 56.863 51 22 0 78 128 5 55 6.19e-15 73.2
MsaG024065 MtrunA17_Chr5g0416341 35.354 99 63 1 17 115 29 126 8.77e-15 74.7
MsaG024065 MtrunA17_Chr4g0042621 52.308 65 31 0 88 152 14 78 1.84e-14 73.2
MsaG024065 MtrunA17_Chr8g0362231 36.364 99 61 2 17 114 25 122 2.92e-14 73.2
MsaG024065 MtrunA17_Chr7g0247141 59.574 47 18 1 1 46 1 47 8.96e-14 65.5
MsaG024065 MtrunA17_Chr5g0434871 51.111 45 22 0 74 118 2 46 3.34e-13 63.9
MsaG024065 MtrunA17_Chr7g0233151 47.059 51 27 0 65 115 1 51 2.66e-12 64.3
MsaG024065 MtrunA17_Chr3g0104491 38.028 71 39 2 53 119 1 70 1.13e-11 64.3
MsaG024065 MtrunA17_Chr5g0434891 54.545 44 20 0 77 120 1 44 4.18e-11 60.5
MsaG024065 MtrunA17_Chr3g0145571 88.462 26 3 0 1 26 1 26 8.84e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG024065 AT4G38620.1 76.510 149 34 1 1 149 1 148 8.17e-82 249
MsaG024065 AT2G16720.1 82.171 129 23 0 1 129 1 129 9.29e-81 246
MsaG024065 AT4G09460.1 63.483 178 50 2 1 176 1 165 2.15e-78 239
MsaG024065 AT4G34990.1 67.296 159 44 1 1 159 1 151 4.05e-78 239
MsaG024065 AT1G22640.1 80.315 127 25 0 1 127 1 127 2.33e-77 237
MsaG024065 AT1G35515.1 78.571 126 27 0 1 126 1 126 7.54e-74 226
MsaG024065 AT4G12350.1 49.495 198 90 2 1 198 1 188 2.34e-66 210
MsaG024065 AT5G26660.1 60.248 161 61 1 1 161 1 158 5.99e-66 211
MsaG024065 AT5G16770.4 67.188 128 42 0 1 128 1 128 1.23e-65 209
MsaG024065 AT5G16770.3 67.188 128 42 0 1 128 1 128 1.23e-65 209
MsaG024065 AT3G02940.2 68.750 128 40 0 1 128 1 128 2.62e-65 208
MsaG024065 AT5G16770.1 67.188 128 42 0 1 128 1 128 3.19e-65 209
MsaG024065 AT5G16770.2 67.188 128 42 0 1 128 1 128 3.19e-65 209
MsaG024065 AT1G57560.2 54.688 192 78 2 1 183 1 192 3.32e-65 207
MsaG024065 AT4G21440.1 62.162 148 53 1 1 145 1 148 4.47e-65 209
MsaG024065 AT1G57560.1 59.494 158 63 1 1 158 1 157 5.15e-65 207
MsaG024065 AT3G02940.1 68.750 128 40 0 1 128 1 128 6.58e-65 207
MsaG024065 AT3G02940.3 68.750 128 40 0 1 128 1 128 6.58e-65 207
MsaG024065 AT4G22680.1 68.992 129 40 0 1 129 1 129 9.44e-65 205
MsaG024065 AT4G28110.1 67.188 128 42 0 1 128 1 128 1.80e-64 205
MsaG024065 AT1G09540.1 56.395 172 74 1 1 171 1 172 9.73e-64 206
MsaG024065 AT3G61250.1 57.516 153 65 0 1 153 1 153 2.26e-63 202
MsaG024065 AT4G05100.1 68.217 129 40 1 1 128 1 129 3.50e-63 203
MsaG024065 AT5G15310.4 51.053 190 85 3 1 185 1 187 8.99e-63 199
MsaG024065 AT4G01680.3 51.232 203 88 3 1 203 1 192 1.47e-62 199
MsaG024065 AT5G15310.2 51.053 190 85 3 1 185 1 187 4.22e-62 200
MsaG024065 AT5G15310.1 51.053 190 85 3 1 185 1 187 5.05e-62 200
MsaG024065 AT4G01680.1 66.667 132 44 0 1 132 1 132 9.94e-62 200
MsaG024065 AT5G07690.1 64.341 129 46 0 1 129 1 129 3.01e-61 198
MsaG024065 AT1G34670.1 63.636 132 48 0 1 132 1 132 5.08e-61 199
MsaG024065 AT3G01140.2 51.075 186 82 1 1 186 1 177 5.36e-61 198
MsaG024065 AT1G74080.1 55.280 161 70 1 1 161 1 159 8.19e-61 197
MsaG024065 AT5G16600.1 60.417 144 57 0 1 144 1 144 1.50e-60 196
MsaG024065 AT5G61420.2 63.566 129 47 0 1 129 1 129 1.87e-60 197
MsaG024065 AT5G60890.1 62.791 129 48 0 1 129 1 129 2.36e-60 195
MsaG024065 AT1G66230.1 63.566 129 47 0 1 129 1 129 5.07e-60 194
MsaG024065 AT3G13540.1 63.492 126 46 0 4 129 15 140 8.07e-60 192
MsaG024065 AT1G18570.1 64.615 130 45 1 1 129 1 130 8.59e-60 195
MsaG024065 AT5G10280.1 60.938 128 50 0 1 128 1 128 1.48e-59 194
MsaG024065 AT5G65230.1 64.844 128 45 0 1 128 1 128 1.58e-59 193
MsaG024065 AT4G17785.2 64.341 129 45 1 1 128 1 129 1.77e-59 194
MsaG024065 AT4G17785.1 64.341 129 45 1 1 128 1 129 1.81e-59 194
MsaG024065 AT5G07700.1 62.016 129 49 0 1 129 1 129 9.58e-59 192
MsaG024065 AT5G07700.2 62.016 129 49 0 1 129 1 129 9.58e-59 192
MsaG024065 AT4G01680.2 62.411 141 41 1 1 129 1 141 3.18e-58 191
MsaG024065 AT3G01140.1 50.273 183 82 1 4 186 47 220 6.81e-58 191
MsaG024065 AT5G62320.1 61.654 133 44 1 2 127 3 135 1.91e-57 186
MsaG024065 AT3G23250.1 49.457 184 90 2 1 183 1 182 3.64e-57 186
MsaG024065 AT5G49330.1 67.797 118 38 0 1 118 1 118 6.32e-57 187
MsaG024065 AT2G47460.1 61.429 140 54 0 1 140 1 140 1.09e-56 187
MsaG024065 AT5G14340.1 59.398 133 54 0 1 133 13 145 1.22e-56 184
MsaG024065 AT5G54230.1 65.625 128 44 0 1 128 1 128 1.31e-56 186
MsaG024065 AT3G13890.2 66.949 118 39 0 1 118 1 118 3.39e-56 186
MsaG024065 AT5G56110.1 59.091 132 54 0 1 132 1 132 3.94e-56 185
MsaG024065 AT1G06180.1 51.667 180 80 2 1 180 1 173 5.87e-56 182
MsaG024065 AT3G62610.1 53.750 160 69 1 1 160 1 155 6.14e-56 185
MsaG024065 AT3G12720.1 62.810 121 45 0 6 126 16 136 7.18e-56 184
MsaG024065 AT2G31180.1 54.088 159 62 1 1 148 1 159 5.30e-55 179
MsaG024065 AT1G16490.1 54.605 152 59 1 2 153 4 145 2.79e-54 179
MsaG024065 AT1G79180.1 67.826 115 37 0 2 116 4 118 8.09e-54 178
MsaG024065 AT1G63910.1 55.705 149 58 1 1 149 1 141 1.45e-53 179
MsaG024065 AT3G13890.1 62.205 127 39 1 1 118 1 127 4.60e-53 178
MsaG024065 AT3G28470.1 50.000 164 81 1 1 164 1 163 1.37e-52 176
MsaG024065 AT3G12820.1 65.812 117 40 0 3 119 5 121 4.30e-52 172
MsaG024065 AT1G56160.1 64.348 115 41 0 2 116 4 118 2.20e-51 172
MsaG024065 AT1G74430.1 55.639 133 59 0 1 133 1 133 3.66e-51 170
MsaG024065 AT1G74650.1 62.931 116 43 0 1 116 1 116 1.76e-50 170
MsaG024065 AT2G36890.1 48.876 178 76 2 1 177 1 164 2.32e-49 166
MsaG024065 AT3G47600.1 60.345 116 46 0 1 116 1 116 4.16e-49 167
MsaG024065 AT5G14750.1 45.304 181 89 3 14 194 18 188 8.22e-49 162
MsaG024065 AT2G36890.2 48.876 178 76 2 1 177 42 205 8.38e-49 166
MsaG024065 AT5G62470.2 61.207 116 45 0 1 116 1 116 9.11e-49 166
MsaG024065 AT1G08810.1 62.069 116 44 0 1 116 1 116 1.03e-48 164
MsaG024065 AT4G37780.1 60.833 120 46 1 1 119 1 120 3.73e-48 164
MsaG024065 AT5G57620.1 59.167 120 48 1 1 119 1 120 4.50e-48 164
MsaG024065 AT3G28910.1 55.039 129 56 1 1 129 1 127 1.26e-47 163
MsaG024065 AT5G23000.1 59.829 117 46 1 1 116 1 117 1.31e-47 163
MsaG024065 AT5G62470.1 61.207 116 44 1 1 116 1 115 3.11e-47 162
MsaG024065 AT5G65790.1 57.500 120 50 1 1 119 1 120 3.32e-47 163
MsaG024065 AT1G79180.2 52.703 148 37 1 2 116 4 151 3.54e-47 162
MsaG024065 AT5G12870.1 65.049 103 36 0 14 116 20 122 5.80e-47 160
MsaG024065 AT3G08500.1 62.037 108 41 0 9 116 27 134 7.90e-47 161
MsaG024065 AT3G49690.1 57.500 120 50 1 1 119 1 120 1.11e-46 160
MsaG024065 AT3G01530.1 48.148 162 82 1 14 175 27 186 6.35e-46 155
MsaG024065 AT5G40330.1 56.881 109 46 1 9 116 8 116 4.29e-45 153
MsaG024065 AT3G27810.1 52.448 143 55 2 14 156 22 151 4.36e-44 150
MsaG024065 AT5G40350.1 50.350 143 71 0 14 156 19 161 4.80e-44 150
MsaG024065 AT5G35550.1 59.259 108 44 0 9 116 11 118 6.60e-44 151
MsaG024065 AT3G27920.1 52.500 120 54 1 8 124 10 129 1.16e-43 150
MsaG024065 AT3G11440.2 62.745 102 38 0 14 115 43 144 2.36e-43 155
MsaG024065 AT5G26660.2 59.829 117 44 1 45 161 14 127 3.34e-43 151
MsaG024065 AT1G18710.1 46.032 189 81 3 1 188 1 169 4.71e-43 149
MsaG024065 AT5G55020.1 63.107 103 38 0 14 116 28 130 5.52e-43 155
MsaG024065 AT3G48920.1 58.491 106 44 0 9 114 15 120 9.52e-43 148
MsaG024065 AT3G11440.3 62.745 102 38 0 14 115 43 144 1.03e-42 155
MsaG024065 AT3G11440.4 62.745 102 38 0 14 115 43 144 1.03e-42 155
MsaG024065 AT3G11440.1 62.745 102 38 0 14 115 43 144 1.03e-42 155
MsaG024065 AT3G24310.1 63.725 102 37 0 14 115 20 121 2.42e-42 147
MsaG024065 AT4G13480.1 64.706 102 36 0 14 115 8 109 2.62e-42 147
MsaG024065 AT1G25340.1 38.967 213 115 5 14 221 20 222 5.47e-42 147
MsaG024065 AT4G26930.1 62.376 101 38 0 14 114 21 121 6.66e-42 149
MsaG024065 AT4G25560.1 62.745 102 38 0 14 115 12 113 9.50e-42 146
MsaG024065 AT2G26960.1 42.541 181 88 3 9 173 17 197 1.02e-41 150
MsaG024065 AT5G06100.1 60.784 102 40 0 14 115 34 135 1.47e-41 150
MsaG024065 AT5G52260.1 58.261 115 48 0 1 115 1 115 2.69e-41 145
MsaG024065 AT5G06100.5 60.784 102 40 0 14 115 34 135 4.69e-41 150
MsaG024065 AT5G06100.2 60.784 102 40 0 14 115 34 135 4.69e-41 150
MsaG024065 AT5G06100.3 60.784 102 40 0 14 115 34 135 4.69e-41 150
MsaG024065 AT5G06100.4 60.784 102 40 0 14 115 34 135 4.69e-41 150
MsaG024065 AT2G32460.1 59.804 102 41 0 14 115 20 121 5.57e-41 149
MsaG024065 AT2G32460.2 59.804 102 41 0 14 115 8 109 5.89e-41 149
MsaG024065 AT5G52600.1 41.176 170 91 1 9 169 9 178 6.90e-41 142
MsaG024065 AT2G47190.1 40.415 193 95 3 8 180 16 208 1.14e-40 143
MsaG024065 AT1G68320.1 59.804 102 41 0 14 115 21 122 6.58e-40 142
MsaG024065 AT1G48000.1 58.416 101 42 0 14 114 34 134 9.37e-40 140
MsaG024065 AT3G30210.1 61.386 101 39 0 14 114 29 129 1.15e-39 140
MsaG024065 AT3G53200.1 60.784 102 40 0 14 115 11 112 2.18e-39 139
MsaG024065 AT5G49620.1 48.077 156 69 1 8 151 22 177 2.76e-38 138
MsaG024065 AT5G59780.3 54.206 107 49 0 9 115 5 111 3.08e-38 135
MsaG024065 AT3G46130.1 51.261 119 56 1 8 124 5 123 3.94e-38 136
MsaG024065 AT3G06490.1 56.303 119 52 0 14 132 21 139 9.96e-38 137
MsaG024065 AT1G25340.2 37.559 213 113 6 14 221 20 217 2.66e-37 134
MsaG024065 AT1G25340.3 37.559 213 113 6 14 221 20 217 5.47e-37 134
MsaG024065 AT1G22640.3 81.429 70 13 0 58 127 1 70 6.66e-37 131
MsaG024065 AT5G14750.3 45.161 155 72 4 40 194 13 154 3.23e-36 128
MsaG024065 AT1G66370.1 51.304 115 52 1 1 115 1 111 5.63e-36 130
MsaG024065 AT5G49620.2 44.118 170 69 2 8 151 22 191 1.28e-34 129
MsaG024065 AT1G66380.1 56.863 102 44 0 14 115 10 111 1.83e-33 120
MsaG024065 AT2G26950.1 47.788 113 58 1 9 121 13 124 3.40e-33 126
MsaG024065 AT3G12820.2 73.611 72 19 0 48 119 2 73 3.87e-33 121
MsaG024065 AT1G56650.1 37.019 208 107 5 14 207 10 207 3.45e-32 120
MsaG024065 AT1G66390.1 55.882 102 45 0 14 115 10 111 4.59e-32 120
MsaG024065 AT3G60460.1 49.541 109 54 1 7 114 6 114 1.55e-31 120
MsaG024065 AT5G35550.2 63.636 77 28 0 40 116 45 121 6.52e-31 117
MsaG024065 AT3G47600.2 66.667 72 24 0 45 116 39 110 1.79e-30 117
MsaG024065 AT3G27810.2 35.533 197 81 4 45 241 4 154 1.82e-30 114
MsaG024065 AT3G46130.3 61.446 83 30 1 44 124 9 91 2.65e-30 115
MsaG024065 AT3G53200.2 67.606 71 23 0 45 115 9 79 2.90e-30 114
MsaG024065 AT5G40350.2 47.321 112 59 0 45 156 5 116 4.67e-30 112
MsaG024065 AT5G59780.2 67.606 71 23 0 45 115 20 90 4.74e-30 114
MsaG024065 AT3G46130.4 62.195 82 29 1 45 124 20 101 6.06e-30 114
MsaG024065 AT3G09230.1 41.243 177 88 5 14 185 55 220 1.20e-29 117
MsaG024065 AT5G67300.1 41.463 164 85 5 14 172 6 163 5.18e-29 113
MsaG024065 AT1G71030.2 44.526 137 71 3 51 183 5 140 8.22e-29 109
MsaG024065 AT5G40360.1 43.220 118 65 2 1 118 145 260 9.08e-29 114
MsaG024065 AT1G71030.1 58.442 77 32 0 51 127 19 95 1.37e-28 109
MsaG024065 AT3G50060.1 49.020 102 51 1 14 115 6 106 3.71e-27 108
MsaG024065 AT3G23250.2 43.939 132 61 3 58 183 1 125 4.57e-27 106
MsaG024065 AT3G27785.1 47.170 106 54 2 14 119 189 292 5.21e-27 110
MsaG024065 AT3G55730.1 53.398 103 45 2 14 115 56 156 8.59e-27 109
MsaG024065 AT5G14750.4 47.619 105 49 2 58 162 1 99 1.10e-26 102
MsaG024065 AT5G14750.2 47.619 105 49 2 58 162 1 99 1.10e-26 102
MsaG024065 AT5G58850.1 44.118 102 56 1 14 115 105 205 1.23e-26 109
MsaG024065 AT4G37260.1 43.262 141 66 3 14 141 13 152 1.47e-26 107
MsaG024065 AT4G18770.1 44.340 106 58 1 14 119 217 321 2.13e-26 108
MsaG024065 AT2G23290.1 50.980 102 49 1 14 115 13 113 2.14e-26 106
MsaG024065 AT2G39880.1 50.980 102 49 1 14 115 50 150 2.21e-26 107
MsaG024065 AT1G18960.1 43.220 118 60 4 14 129 10 122 3.88e-26 105
MsaG024065 AT5G02320.1 44.660 103 56 1 14 116 127 228 7.34e-26 107
MsaG024065 AT5G02320.2 44.660 103 56 1 14 116 127 228 7.34e-26 107
MsaG024065 AT5G02320.3 44.660 103 56 1 14 116 67 168 1.28e-25 107
MsaG024065 AT4G32730.5 30.556 216 127 5 14 225 87 283 1.42e-25 107
MsaG024065 AT4G32730.4 30.556 216 127 5 14 225 87 283 1.42e-25 107
MsaG024065 AT4G32730.3 30.556 216 127 5 14 225 87 283 1.42e-25 107
MsaG024065 AT4G32730.2 30.556 216 127 5 14 225 87 283 1.42e-25 107
MsaG024065 AT4G32730.1 30.556 216 127 5 14 225 87 283 1.49e-25 107
MsaG024065 AT5G11050.1 43.137 102 57 1 14 115 105 205 3.10e-25 105
MsaG024065 AT3G09370.1 44.340 106 50 2 14 115 130 230 1.56e-24 103
MsaG024065 AT3G09370.2 37.580 157 84 3 14 161 135 286 1.60e-24 103
MsaG024065 AT3G09370.3 37.580 157 84 3 14 161 143 294 1.69e-24 103
MsaG024065 AT1G66380.3 59.722 72 29 0 44 115 7 78 4.54e-24 94.7
MsaG024065 AT5G11510.3 41.905 105 60 1 14 118 81 184 1.35e-23 102
MsaG024065 AT5G11510.3 33.654 104 67 2 10 112 25 127 9.91e-12 66.2
MsaG024065 AT5G11510.1 41.905 105 60 1 14 118 81 184 1.35e-23 102
MsaG024065 AT5G11510.1 33.654 104 67 2 10 112 25 127 9.91e-12 66.2
MsaG024065 AT5G11510.4 41.905 105 60 1 14 118 81 184 1.35e-23 102
MsaG024065 AT5G11510.4 33.654 104 67 2 10 112 25 127 9.91e-12 66.2
MsaG024065 AT5G11510.2 41.905 105 60 1 14 118 81 184 1.86e-23 101
MsaG024065 AT5G11510.2 33.654 104 67 2 10 112 25 127 1.03e-11 66.2
MsaG024065 AT5G11510.5 41.905 105 60 1 14 118 81 184 1.97e-23 101
MsaG024065 AT5G11510.5 33.654 104 67 2 10 112 25 127 1.15e-11 65.9
MsaG024065 AT1G17950.1 42.105 114 59 2 14 121 5 117 3.35e-23 96.7
MsaG024065 AT2G25230.1 39.316 117 70 1 4 120 16 131 1.71e-22 94.4
MsaG024065 AT1G69560.2 40.741 108 63 1 9 116 118 224 4.86e-22 95.1
MsaG024065 AT1G69560.1 40.741 108 63 1 9 116 102 208 5.78e-22 94.7
MsaG024065 AT5G17800.1 38.462 130 77 2 14 143 93 219 2.14e-21 93.2
MsaG024065 AT1G26780.1 42.157 102 58 1 14 115 98 198 2.76e-21 92.0
MsaG024065 AT1G26780.2 42.157 102 58 1 14 115 98 198 4.18e-21 92.8
MsaG024065 AT4G33450.1 37.168 113 65 2 3 115 13 119 7.67e-21 90.1
MsaG024065 AT1G73410.1 44.660 103 54 2 14 115 6 106 8.33e-21 89.7
MsaG024065 AT1G73410.2 44.660 103 54 2 14 115 6 106 1.19e-20 88.6
MsaG024065 AT3G29020.2 38.835 103 62 1 14 116 67 168 3.15e-20 89.4
MsaG024065 AT3G29020.1 38.835 103 62 1 14 116 65 166 3.30e-20 88.2
MsaG024065 AT4G00540.2 43.396 106 56 2 14 116 103 207 4.47e-20 90.5
MsaG024065 AT4G00540.1 43.396 106 56 2 14 116 101 205 7.33e-20 90.1
MsaG024065 AT1G66380.2 50.633 79 39 0 14 92 10 88 6.65e-19 81.3
MsaG024065 AT5G61420.1 71.429 49 14 0 81 129 2 50 7.21e-19 85.5
MsaG024065 AT5G40430.1 36.036 111 69 2 4 114 44 152 1.03e-17 81.6
MsaG024065 AT1G22640.2 76.190 42 10 0 88 129 16 57 1.32e-16 77.0
MsaG024065 AT2G37630.1 41.667 96 54 1 17 110 7 102 2.78e-16 79.0
MsaG024065 AT5G39700.1 37.000 100 62 1 15 114 57 155 5.22e-16 75.5
MsaG024065 AT2G02820.2 38.384 99 60 1 17 115 33 130 6.28e-16 78.6
MsaG024065 AT2G02820.1 38.384 99 60 1 17 115 33 130 8.04e-16 78.2
MsaG024065 AT2G02820.3 38.384 99 60 1 17 115 33 130 2.01e-15 76.3
MsaG024065 AT5G59780.1 63.043 46 17 0 70 115 1 46 3.45e-15 72.8
MsaG024065 AT3G46130.2 56.140 57 23 1 70 124 1 57 3.83e-15 73.2
MsaG024065 AT4G25560.2 67.442 43 14 0 73 115 5 47 4.05e-15 73.6
MsaG024065 AT4G28110.2 68.293 41 13 0 88 128 4 44 7.55e-15 72.4
MsaG024065 AT1G14350.2 37.374 99 61 1 17 115 28 125 9.35e-15 75.1
MsaG024065 AT1G14350.1 37.374 99 61 1 17 115 28 125 9.35e-15 75.1
MsaG024065 AT5G15310.3 40.777 103 53 3 88 185 9 108 4.81e-14 71.2
MsaG024065 AT3G28910.2 52.830 53 23 1 77 129 1 51 6.74e-13 67.8
MsaG024065 AT1G74650.3 65.000 40 14 0 77 116 1 40 2.86e-12 66.2
MsaG024065 AT1G74430.2 47.368 57 30 0 77 133 8 64 2.98e-12 65.1
MsaG024065 AT3G18100.1 36.792 106 61 2 12 117 544 643 6.53e-12 67.0
MsaG024065 AT3G18100.4 31.757 148 87 4 12 159 383 516 7.39e-12 66.6
MsaG024065 AT3G18100.3 31.757 148 87 4 12 159 496 629 7.61e-12 66.6
MsaG024065 AT5G14340.2 54.348 46 21 0 88 133 10 55 7.65e-12 63.5
MsaG024065 AT3G18100.2 31.973 147 86 4 12 158 331 463 9.99e-12 66.2

Find 78 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCGTCAAATATCTTT+AGG 0.182062 4:+95407487 MsaT024065.1:CDS
GATCTCATTGTCTGTTCTTC+CGG 0.221330 4:-95406999 None:intergenic
ATCTCATTGTCTGTTCTTCC+GGG 0.278170 4:-95406998 None:intergenic
TAATATATACCTGCGGCTTT+AGG 0.316628 4:-95406511 None:intergenic
AATCAACTTGGAACTTTCAT+TGG 0.322311 4:+95407420 MsaT024065.1:CDS
GTTGTTTGATATAGTTAATA+AGG 0.322850 4:-95406462 None:intergenic
TTGAGTGGCTGATGTGTTGT+AGG 0.350899 4:-95407076 None:intergenic
AACAACAAGGTGAAGGTTGC+TGG 0.363863 4:+95406479 MsaT024065.1:CDS
AATGAAAGTTCCAAGTTGAT+TGG 0.369039 4:-95407418 None:intergenic
TTTGTCGTCAAATATCTTTA+GGG 0.370282 4:+95407488 MsaT024065.1:CDS
GGCGCCGCTGCCGCTTCAGC+CGG 0.372168 4:+95407109 MsaT024065.1:CDS
ACAATGAGATCAAGAACTAT+TGG 0.386834 4:+95407011 MsaT024065.1:CDS
AAGGCGTTCATCTTCTTCCT+TGG 0.409969 4:-95406443 None:intergenic
GGCTGAAGCGGCAGCGGCGC+CGG 0.415460 4:-95407107 None:intergenic
AAGTTTCCACGTTTAAGATC+AGG 0.434602 4:-95406696 None:intergenic
AGTACTGCTCTCGTTGGTTG+AGG 0.444995 4:-95407218 None:intergenic
AGAAGCTGCTTCTCCTTCAA+TGG 0.455907 4:+95407159 MsaT024065.1:CDS
TTCCCGACGCCGGTGGTAGC+AGG 0.460111 4:-95407601 None:intergenic
TCTTAATCTTGTTGTGGTGG+TGG 0.469641 4:-95407255 None:intergenic
GTTGCAACTGATTCTGTCCA+TGG 0.469860 4:+95407328 MsaT024065.1:CDS
ACGCCGGTGGTAGCAGGTGG+TGG 0.472661 4:-95407595 None:intergenic
CAAATATCTTTAGGGTTACA+TGG 0.477003 4:+95407496 MsaT024065.1:CDS
GCTACCACCGGCGTCGGGAA+TGG 0.480018 4:+95407604 MsaT024065.1:CDS
TTATTATTAACAACCATTGA+AGG 0.483862 4:-95407172 None:intergenic
AGCGGCAGCGGCGCCGGAGA+GGG 0.484893 4:-95407101 None:intergenic
CACCTGCTACCACCGGCGTC+GGG 0.491522 4:+95407599 MsaT024065.1:CDS
TCAGTAATTTCAGTGGCTCT+CGG 0.500245 4:+95407293 MsaT024065.1:CDS
AGAAGCAGCTTCTGCGGAGG+TGG 0.515199 4:-95407149 None:intergenic
AGTACCGGCTGAAGCGGCAG+CGG 0.515809 4:-95407113 None:intergenic
CACTCTTAATCTTGTTGTGG+TGG 0.527882 4:-95407258 None:intergenic
CAGCCACTCAAAACCCTCTC+CGG 0.529029 4:+95407088 MsaT024065.1:CDS
AGTTCCAAGTTGATTGGAGG+AGG 0.529728 4:-95407412 None:intergenic
GAAAGTTCCAAGTTGATTGG+AGG 0.531148 4:-95407415 None:intergenic
TGAGGGTACTACAGGTAATA+CGG 0.532096 4:-95407200 None:intergenic
TATCATTAGCCTCCACGCTA+TGG 0.539507 4:+95406740 MsaT024065.1:CDS
GTACTGCTCTCGTTGGTTGA+GGG 0.539997 4:-95407217 None:intergenic
TATTGCAGCAACAAGGTTGG+TGG 0.541765 4:-95407525 None:intergenic
TCGTTGGTTGAGGGTACTAC+AGG 0.542515 4:-95407208 None:intergenic
TGCGGAGGTGGTTGTTGCTG+AGG 0.545243 4:-95407137 None:intergenic
AAGCGGCAGCGGCGCCGGAG+AGG 0.551698 4:-95407102 None:intergenic
AACACACAAACAAAGGTGCT+TGG 0.551791 4:+95406419 MsaT024065.1:CDS
CGTTCTCTTCCTAAAGCCGC+AGG 0.552268 4:+95406502 MsaT024065.1:CDS
ATTAGCCTCCACGCTATGGT+TGG 0.553340 4:+95406744 MsaT024065.1:CDS
CTGTGGCTGTTGAGAGGGAG+AGG 0.555159 4:-95407449 None:intergenic
CCACCTGCTACCACCGGCGT+CGG 0.562507 4:+95407598 MsaT024065.1:CDS
AAACTTGACAATCCCTGCCC+CGG 0.568210 4:-95407641 None:intergenic
AACACAGGCTTGGCAAGATG+TGG 0.575098 4:+95406636 MsaT024065.1:intron
TGAGGAAGTACCGGCTGAAG+CGG 0.577777 4:-95407119 None:intergenic
TATTATTGCAGCAACAAGGT+TGG 0.582196 4:-95407528 None:intergenic
ACTCACTCTTAATCTTGTTG+TGG 0.587928 4:-95407261 None:intergenic
AAACAAAGGTGCTTGGTCCA+AGG 0.588189 4:+95406426 MsaT024065.1:CDS
TTATCCTCCTCCAATCAACT+TGG 0.588353 4:+95407408 MsaT024065.1:CDS
CAGTTATTCAGTAATTTCAG+TGG 0.590300 4:+95407286 MsaT024065.1:CDS
GCTCCACCACCTGCTACCAC+CGG 0.597086 4:+95407592 MsaT024065.1:CDS
CTCAGACCTGATCTTAAACG+TGG 0.598711 4:+95406690 MsaT024065.1:CDS
AAACGCAAACTCTATAGCCG+TGG 0.599125 4:+95407046 MsaT024065.1:CDS
TGAAGGAGAAGCAGCTTCTG+CGG 0.602575 4:-95407155 None:intergenic
GAAGTTGAAACACCAACGAT+AGG 0.603237 4:-95407556 None:intergenic
GGTTGTTGCTGAGGAAGTAC+CGG 0.604216 4:-95407128 None:intergenic
ATGGTATTATTGCAGCAACA+AGG 0.622111 4:-95407532 None:intergenic
ACTTGTTTCCAACCATAGCG+TGG 0.623181 4:-95406752 None:intergenic
TATATCAAACAACAAGGTGA+AGG 0.624328 4:+95406472 MsaT024065.1:CDS
TAGCAGTGGTGTTACCGTTG+AGG 0.625555 4:+95407378 MsaT024065.1:CDS
CCGACGCCGGTGGTAGCAGG+TGG 0.625901 4:-95407598 None:intergenic
GCTACTAGTACTGCTCTCGT+TGG 0.626573 4:-95407224 None:intergenic
TCAGTTTCAAACAGTAGCAG+TGG 0.628636 4:+95407364 MsaT024065.1:CDS
AATAATACCATGCCTATCGT+TGG 0.630120 4:+95407544 MsaT024065.1:CDS
ACGTGGAAACTTCACTCATG+AGG 0.636253 4:+95406707 MsaT024065.1:CDS
AGGATAAGCTATATCCTCAA+CGG 0.643736 4:-95407392 None:intergenic
CTGATTCTTCAACACCACCA+TGG 0.645930 4:-95407345 None:intergenic
AAAACCATTCCCGACGCCGG+TGG 0.648900 4:-95407608 None:intergenic
GTGTTGTAGGATCAATTCCA+CGG 0.654495 4:-95407063 None:intergenic
TGAAACACCAACGATAGGCA+TGG 0.666214 4:-95407551 None:intergenic
AGGAGAAGCAGCTTCTGCGG+AGG 0.667672 4:-95407152 None:intergenic
ACAGCAAGGAGATCTACCCA+TGG 0.704613 4:-95406389 None:intergenic
GCAACTGATTCTGTCCATGG+TGG 0.713175 4:+95407331 MsaT024065.1:CDS
ATTAACTATATCAAACAACA+AGG 0.716458 4:+95406466 MsaT024065.1:CDS
TGTTTCCAACCATAGCGTGG+AGG 0.719128 4:-95406749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 95406391 95407666 95406391 ID=MsaG024065
Chr4 mRNA 95406391 95407666 95406391 ID=MsaT024065.1;Parent=MsaG024065
Chr4 exon 95406391 95406523 95406391 ID=MsaT024065.1.exon1;Parent=MsaT024065.1
Chr4 CDS 95406391 95406523 95406391 ID=cds.MsaT024065.1;Parent=MsaT024065.1
Chr4 exon 95406643 95406772 95406643 ID=MsaT024065.1.exon2;Parent=MsaT024065.1
Chr4 CDS 95406643 95406772 95406643 ID=cds.MsaT024065.1;Parent=MsaT024065.1
Chr4 exon 95406973 95407666 95406973 ID=MsaT024065.1.exon3;Parent=MsaT024065.1
Chr4 CDS 95406973 95407666 95406973 ID=cds.MsaT024065.1;Parent=MsaT024065.1
Gene Sequence

>MsaT024065.1

ATGGGTAGATCTCCTTGCTGTGAAAAACAACACACAAACAAAGGTGCTTGGTCCAAGGAAGAAGATGAACGCCTTATTAACTATATCAAACAACAAGGTGAAGGTTGCTGGCGTTCTCTTCCTAAAGCCGCAGGCTTGGCAAGATGTGGAAAAAGCTGTAGATTGAGATGGATCAATTATCTCAGACCTGATCTTAAACGTGGAAACTTCACTCATGAGGAAGATGAACTTATCATTAGCCTCCACGCTATGGTTGGAAACAAATGGTCTCAGATTGCTCAAAAATTGCCCGGAAGAACAGACAATGAGATCAAGAACTATTGGAACACTCACATAAAACGCAAACTCTATAGCCGTGGAATTGATCCTACAACACATCAGCCACTCAAAACCCTCTCCGGCGCCGCTGCCGCTTCAGCCGGTACTTCCTCAGCAACAACCACCTCCGCAGAAGCTGCTTCTCCTTCAATGGTTGTTAATAATAATTCATCCGTATTACCTGTAGTACCCTCAACCAACGAGAGCAGTACTAGTAGCAGCATGAGCCACCACCACAACAAGATTAAGAGTGAGTTTCAGTTATTCAGTAATTTCAGTGGCTCTCGGCTTAAAAAGTTTGTTGCAACTGATTCTGTCCATGGTGGTGTTGAAGAATCAGTTTCAAACAGTAGCAGTGGTGTTACCGTTGAGGATATAGCTTATCCTCCTCCAATCAACTTGGAACTTTCATTGGCTATATCCTCTCCCTCTCAACAGCCACAGCAAAAAGCTTTGTGTCTTTGTCGTCAAATATCTTTAGGGTTACATGGTAGTAGCCACCAACCTTGTTGCTGCAATAATACCATGCCTATCGTTGGTGTTTCAACTTCTTATGCTGTTACTGCTCCACCACCTGCTACCACCGGCGTCGGGAATGGTTTTTTCAAATTTTCCGGGGCAGGGATTGTCAAGTTTTGA
Protein sequence

>MsaT024065.1

MGRSPCCEKQHTNKGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTHEEDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGIDPTTHQPLKTLSGAAAASAGTSSATTTSAEAASPSMVVNNNSSVLPVVPSTNESSTSSSMSHHHNKIKSEFQLFSNFSGSRLKKFVATDSVHGGVEESVSNSSSGVTVEDIAYPPPINLELSLAISSPSQQPQQKALCLCRQISLGLHGSSHQPCCCNNTMPIVGVSTSYAVTAPPPATTGVGNGFFKFSGAGIVKF*