AlfalfaGEDB | MsaG024159

M. sativa ssp. caerulea / MsaG024159

KEGG: K09377
GO: -
PFAM: PF00412.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG024159	KEH21040.1	98.104	211	4	0	1	211	1	211	5.62e-151	427

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG024159	sp\|Q500W4\|PLI2C_ARATH	54.930	213	87	3	2	210	3	210	2.73e-78	236
MsaG024159	sp\|Q500W4\|PLI2C_ARATH	53.425	73	34	0	93	165	2	74	1.33e-20	89.0

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG024159	tr\|A0A072U5A9\|A0A072U5A9_MEDTR	98.104	211	4	0	1	211	1	211	2.68e-151	427

TFs/TRs:

Gene ID	Type	Classification
MsaG024159	TF	LIM

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000005	MsaG024159	0.814564	2.496981e-51	4.773981e-49
MsaG000234	MsaG024159	0.804210	4.063984e-49	6.049536e-47
MsaG000364	MsaG024159	0.811004	1.489477e-50	2.606690e-48
MsaG000520	MsaG024159	0.826058	5.943060e-54	1.539412e-51
MsaG000842	MsaG024159	0.803923	4.660729e-49	6.891599e-47
MsaG001771	MsaG024159	0.811126	1.402269e-50	2.461372e-48
MsaG001828	MsaG024159	0.842152	5.722233e-58	2.391071e-55
MsaG002209	MsaG024159	0.815306	1.712239e-51	3.335671e-49
MsaG002405	MsaG024159	0.873412	3.087340e-67	4.141043e-64
MsaG002484	MsaG024159	0.835343	3.232865e-56	1.094066e-53
MsaG002530	MsaG024159	0.810778	1.666724e-50	2.900788e-48
MsaG002717	MsaG024159	0.816464	9.471891e-52	1.900313e-49
MsaG002731	MsaG024159	0.839833	2.309233e-57	8.967790e-55
MsaG002975	MsaG024159	0.817040	7.044219e-52	1.434440e-49
MsaG003089	MsaG024159	0.848155	1.388616e-59	7.068754e-57
MsaG003292	MsaG024159	0.873669	2.532696e-67	3.435765e-64
MsaG003299	MsaG024159	0.836752	1.425033e-56	5.031097e-54
MsaG003305	MsaG024159	0.808409	5.349973e-50	8.792226e-48
MsaG003306	MsaG024159	0.825657	7.392306e-54	1.893440e-51
MsaG003743	MsaG024159	0.837025	1.214809e-56	4.324374e-54
MsaG003740	MsaG024159	0.845211	8.773027e-59	4.047842e-56
MsaG003750	MsaG024159	0.819931	1.569151e-52	3.444813e-50
MsaG003769	MsaG024159	0.851764	1.373219e-60	7.910795e-58
MsaG003880	MsaG024159	0.807769	7.309689e-50	1.182972e-47
MsaG003896	MsaG024159	0.807415	8.685721e-50	1.393770e-47
MsaG003934	MsaG024159	0.838076	6.549451e-57	2.407718e-54
MsaG003938	MsaG024159	0.863195	5.876180e-64	5.167672e-61
MsaG004111	MsaG024159	0.824881	1.125421e-53	2.821808e-51
MsaG004227	MsaG024159	0.812041	8.889086e-51	1.595721e-48
MsaG004199	MsaG024159	0.819717	1.755180e-52	3.831269e-50
MsaG004306	MsaG024159	0.818775	2.869750e-52	6.111379e-50
MsaG004367	MsaG024159	0.818593	3.154707e-52	6.686374e-50
MsaG004465	MsaG024159	0.867314	3.019363e-65	3.131592e-62
MsaG004510	MsaG024159	0.820934	9.263511e-53	2.088358e-50
MsaG004805	MsaG024159	0.836340	1.812268e-56	6.319526e-54
MsaG005023	MsaG024159	0.834049	6.818675e-56	2.219872e-53
MsaG005455	MsaG024159	0.811467	1.183485e-50	2.094838e-48
MsaG005524	MsaG024159	0.826602	4.415946e-54	1.161243e-51
MsaG005574	MsaG024159	0.805648	2.040889e-49	3.141122e-47
MsaG005664	MsaG024159	0.846784	3.293369e-59	1.601113e-56
MsaG005942	MsaG024159	0.802324	9.942459e-49	1.417022e-46
MsaG006357	MsaG024159	0.817936	4.435005e-52	9.241784e-50
MsaG006425	MsaG024159	0.852452	8.770121e-61	5.175936e-58
MsaG006586	MsaG024159	0.855309	1.331220e-61	8.696814e-59
MsaG006552	MsaG024159	0.851372	1.770307e-60	1.005921e-57
MsaG006640	MsaG024159	0.802133	1.087962e-48	1.543750e-46
MsaG006701	MsaG024159	0.823157	2.843982e-53	6.804172e-51
MsaG006743	MsaG024159	0.826607	4.404090e-54	1.158285e-51
MsaG006813	MsaG024159	0.824702	1.239617e-53	3.092914e-51
MsaG006910	MsaG024159	0.801134	1.739990e-48	2.413583e-46
MsaG007015	MsaG024159	0.802136	1.086618e-48	1.541930e-46
MsaG007525	MsaG024159	0.807045	1.039344e-49	1.653214e-47
MsaG007663	MsaG024159	0.832158	2.003801e-55	6.172508e-53
MsaG007665	MsaG024159	0.843930	1.934161e-58	8.556353e-56
MsaG007759	MsaG024159	0.841608	7.956146e-58	3.267451e-55
MsaG008168	MsaG024159	0.851070	2.151970e-60	1.210170e-57
MsaG009372	MsaG024159	0.832477	1.672414e-55	5.199383e-53
MsaG010004	MsaG024159	0.808442	5.263540e-50	8.657330e-48
MsaG010148	MsaG024159	0.807921	6.787797e-50	1.102579e-47
MsaG010418	MsaG024159	0.856003	8.367095e-62	5.605434e-59
MsaG010631	MsaG024159	0.842720	4.051337e-58	1.724097e-55
MsaG010621	MsaG024159	0.810185	2.234951e-50	3.833830e-48
MsaG010703	MsaG024159	0.849331	6.576796e-60	3.484198e-57
MsaG010994	MsaG024159	0.818745	2.915195e-52	6.203183e-50
MsaG011587	MsaG024159	0.822518	4.000529e-53	9.407427e-51
MsaG011657	MsaG024159	0.842269	5.329199e-58	2.235228e-55
MsaG011749	MsaG024159	0.804617	3.346904e-49	5.029049e-47
MsaG012438	MsaG024159	0.815345	1.678705e-51	3.273538e-49
MsaG012458	MsaG024159	0.802245	1.032102e-48	1.468233e-46
MsaG012461	MsaG024159	0.823297	2.639187e-53	6.338367e-51
MsaG012521	MsaG024159	0.812134	8.485977e-51	1.526804e-48
MsaG012747	MsaG024159	0.851479	1.651596e-60	9.420431e-58
MsaG012982	MsaG024159	0.874545	1.283464e-67	1.809520e-64
MsaG013426	MsaG024159	0.835962	2.257806e-56	7.783928e-54
MsaG013708	MsaG024159	0.833862	7.590224e-56	2.457381e-53
MsaG013895	MsaG024159	0.848351	1.226450e-59	6.283760e-57
MsaG014560	MsaG024159	0.807255	9.387653e-50	1.500637e-47
MsaG015096	MsaG024159	0.825265	9.142444e-54	2.316579e-51
MsaG015329	MsaG024159	0.813014	5.459332e-51	1.004038e-48
MsaG015353	MsaG024159	0.811637	1.087613e-50	1.933122e-48
MsaG015358	MsaG024159	0.833881	7.505701e-56	2.431380e-53
MsaG016390	MsaG024159	0.813270	4.800208e-51	8.884485e-49
MsaG016827	MsaG024159	0.864883	1.762257e-64	1.657128e-61
MsaG016906	MsaG024159	0.841458	8.707679e-58	3.559169e-55
MsaG016972	MsaG024159	0.830212	5.996088e-55	1.745874e-52
MsaG017085	MsaG024159	0.845594	6.920196e-59	3.233666e-56
MsaG017380	MsaG024159	0.855773	9.757076e-62	6.481779e-59
MsaG017418	MsaG024159	0.825895	6.491781e-54	1.674019e-51
MsaG017724	MsaG024159	0.801402	1.534711e-48	2.141779e-46
MsaG017802	MsaG024159	0.829778	7.643188e-55	2.197982e-52
MsaG018097	MsaG024159	0.824205	1.620547e-53	3.988935e-51
MsaG018234	MsaG024159	0.845380	7.900816e-59	3.666077e-56
MsaG018226	MsaG024159	0.820410	1.220125e-52	2.712846e-50
MsaG018384	MsaG024159	0.812458	7.216704e-51	1.308968e-48
MsaG018726	MsaG024159	0.828751	1.353155e-54	3.778966e-52
MsaG018806	MsaG024159	0.859159	9.824297e-63	7.397945e-60
MsaG018847	MsaG024159	0.813572	4.122063e-51	7.687669e-49
MsaG018860	MsaG024159	0.805622	2.066125e-49	3.178047e-47
MsaG018863	MsaG024159	0.814372	2.752183e-51	5.236791e-49
MsaG018919	MsaG024159	0.815153	1.850655e-51	3.591295e-49
MsaG018920	MsaG024159	0.803342	6.142034e-49	8.960658e-47
MsaG018922	MsaG024159	0.841555	8.215075e-58	3.368194e-55
MsaG019031	MsaG024159	0.848176	1.370497e-59	6.981398e-57
MsaG019214	MsaG024159	0.838587	4.841698e-57	1.808444e-54
MsaG019456	MsaG024159	0.814638	2.404486e-51	4.605750e-49
MsaG019501	MsaG024159	0.815331	1.690644e-51	3.295668e-49
MsaG019492	MsaG024159	0.833121	1.159206e-55	3.672632e-53
MsaG019621	MsaG024159	0.825837	6.700599e-54	1.725025e-51
MsaG019629	MsaG024159	0.852848	6.769084e-61	4.050813e-58
MsaG019779	MsaG024159	0.805112	2.639726e-49	4.012391e-47
MsaG020016	MsaG024159	0.808498	5.121654e-50	8.435330e-48
MsaG020017	MsaG024159	0.808736	4.559308e-50	7.552526e-48
MsaG020135	MsaG024159	0.806409	1.414279e-49	2.216186e-47
MsaG020206	MsaG024159	0.810770	1.673069e-50	2.911288e-48
MsaG020312	MsaG024159	0.843026	3.362044e-58	1.444869e-55
MsaG020335	MsaG024159	0.804933	2.876295e-49	4.353860e-47
MsaG020365	MsaG024159	0.853959	3.259119e-61	2.028910e-58
MsaG020498	MsaG024159	0.813342	4.628343e-51	8.581969e-49
MsaG020578	MsaG024159	0.847828	1.707494e-59	8.597930e-57
MsaG020670	MsaG024159	0.843432	2.623440e-58	1.142215e-55
MsaG020679	MsaG024159	0.858562	1.479397e-62	1.089417e-59
MsaG020780	MsaG024159	0.806780	1.181638e-49	1.867913e-47
MsaG021001	MsaG024159	0.847671	1.885467e-59	9.443190e-57
MsaG021077	MsaG024159	0.833521	9.225231e-56	2.957170e-53
MsaG021079	MsaG024159	0.821818	5.804024e-53	1.339431e-50
MsaG021816	MsaG024159	0.807399	8.753393e-50	1.404076e-47
MsaG022478	MsaG024159	0.820989	8.995905e-53	2.031074e-50
MsaG022584	MsaG024159	0.862713	8.265304e-64	7.132576e-61
MsaG022824	MsaG024159	0.801793	1.277348e-48	1.798508e-46
MsaG023378	MsaG024159	0.812495	7.081770e-51	1.285721e-48
MsaG023442	MsaG024159	0.817687	5.046198e-52	1.044750e-49
MsaG023666	MsaG024159	0.813362	4.582438e-51	8.501110e-49
MsaG023817	MsaG024159	0.841021	1.133497e-57	4.569253e-55
MsaG023907	MsaG024159	0.815100	1.901265e-51	3.684559e-49
MsaG023993	MsaG024159	0.847577	2.000270e-59	9.986792e-57
MsaG024150	MsaG024159	0.817117	6.771572e-52	1.381639e-49
MsaG024152	MsaG024159	0.821996	5.278538e-53	1.224014e-50
MsaG024159	MsaG024652	0.815604	1.471250e-51	2.887890e-49
MsaG024159	MsaG025160	0.815970	1.219925e-51	2.416938e-49
MsaG024159	MsaG025404	0.807186	9.707376e-50	1.549258e-47
MsaG024159	MsaG026770	0.809482	3.161138e-50	5.331484e-48
MsaG024159	MsaG026822	0.811791	1.007152e-50	1.796899e-48
MsaG024159	MsaG026926	0.829698	7.991175e-55	2.292803e-52
MsaG024159	MsaG026966	0.838227	5.992299e-57	2.213152e-54
MsaG024159	MsaG027028	0.800346	2.515781e-48	3.428151e-46
MsaG024159	MsaG027054	0.818804	2.827024e-52	6.024860e-50
MsaG024159	MsaG027285	0.830387	5.436393e-55	1.590904e-52
MsaG024159	MsaG027309	0.859959	5.659988e-63	4.393777e-60
MsaG024159	MsaG027630	0.801860	1.237440e-48	1.745022e-46
MsaG024159	MsaG027773	0.845188	8.901024e-59	4.103713e-56
MsaG024159	MsaG028255	0.804071	4.341676e-49	6.442321e-47
MsaG024159	MsaG028348	0.814523	2.549645e-51	4.869705e-49
MsaG024159	MsaG028553	0.838787	4.302210e-57	1.616992e-54
MsaG024159	MsaG028607	0.853818	3.578872e-61	2.216577e-58
MsaG024159	MsaG028787	0.827440	2.789920e-54	7.510299e-52
MsaG024159	MsaG028801	0.804165	4.151589e-49	6.173487e-47
MsaG024159	MsaG028830	0.863969	3.388601e-64	3.072534e-61
MsaG024159	MsaG028985	0.843219	2.988468e-58	1.292250e-55
MsaG024159	MsaG029443	0.842111	5.866745e-58	2.448232e-55
MsaG024159	MsaG029702	0.818315	3.644881e-52	7.669581e-50
MsaG024159	MsaG029813	0.843807	2.085381e-58	9.189124e-56
MsaG024159	MsaG029875	0.800906	1.936127e-48	2.671823e-46
MsaG024159	MsaG030518	0.804369	3.766659e-49	5.627676e-47
MsaG024159	MsaG030993	0.804954	2.847955e-49	4.313055e-47
MsaG024159	MsaG031491	0.802111	1.099648e-48	1.559508e-46
MsaG024159	MsaG031586	0.864081	3.130089e-64	2.850732e-61
MsaG024159	MsaG031750	0.855468	1.196999e-61	7.865408e-59
MsaG024159	MsaG033702	0.841973	6.378829e-58	2.650495e-55
MsaG024159	MsaG033966	0.839868	2.262187e-57	8.794759e-55
MsaG024159	MsaG034740	0.824172	1.649783e-53	4.057209e-51
MsaG024159	MsaG034949	0.825961	6.265600e-54	1.618621e-51
MsaG024159	MsaG034956	0.818950	2.620096e-52	5.605458e-50
MsaG024159	MsaG034999	0.807786	7.249583e-50	1.173747e-47
MsaG024159	MsaG035275	0.831791	2.466786e-55	7.518322e-53
MsaG024159	MsaG035323	0.836274	1.883053e-56	6.553530e-54
MsaG024159	MsaG035580	0.803881	4.753795e-49	7.022367e-47
MsaG024159	MsaG036060	0.813979	3.356759e-51	6.324561e-49
MsaG024159	MsaG036111	0.862317	1.092859e-63	9.285520e-61
MsaG024159	MsaG036130	0.845853	5.889441e-59	2.775586e-56
MsaG024159	MsaG036131	0.867007	3.780659e-65	3.873284e-62
MsaG024159	MsaG036211	0.831346	3.172141e-55	9.541844e-53
MsaG024159	MsaG036294	0.806871	1.130737e-49	1.791218e-47
MsaG024159	MsaG036485	0.800365	2.493504e-48	3.399285e-46
MsaG024159	MsaG036511	0.802543	8.967992e-49	1.284534e-46
MsaG024159	MsaG036512	0.819426	2.044058e-52	4.428085e-50
MsaG024159	MsaG037763	0.803985	4.524871e-49	6.700363e-47
MsaG024159	MsaG038022	0.850390	3.336794e-60	1.832684e-57
MsaG024159	MsaG039325	0.819419	2.051860e-52	4.444123e-50
MsaG024159	MsaG040443	0.804440	3.642100e-49	5.450302e-47
MsaG024159	MsaG040696	0.863252	5.646506e-64	4.977006e-61
MsaG024159	MsaG040755	0.840271	1.777129e-57	6.996918e-55
MsaG024159	MsaG041015	0.819766	1.710474e-52	3.738548e-50
MsaG024159	MsaG041017	0.810344	2.066557e-50	3.558872e-48
MsaG024159	MsaG041019	0.830319	5.648471e-55	1.649669e-52
MsaG024159	MsaG041044	0.828298	1.738823e-54	4.794830e-52
MsaG024159	MsaG041117	0.825784	6.896387e-54	1.772775e-51
MsaG024159	MsaG041171	0.844482	1.376489e-58	6.200533e-56
MsaG024159	MsaG041172	0.827018	3.516348e-54	9.354517e-52
MsaG024159	MsaG041230	0.829366	9.617141e-55	2.733075e-52
MsaG024159	MsaG041392	0.820185	1.373173e-52	3.035142e-50
MsaG024159	MsaG042225	0.820559	1.128682e-52	2.519345e-50
MsaG024159	MsaG042323	0.803743	5.077956e-49	7.477408e-47
MsaG024159	MsaG043344	0.843140	3.136422e-58	1.352793e-55
MsaG024159	MsaG043967	0.809884	2.593562e-50	4.416639e-48
MsaG024159	MsaG044023	0.814530	2.540727e-51	4.853437e-49
MsaG024159	MsaG044025	0.844867	1.085461e-58	4.952641e-56
MsaG024159	MsaG045111	0.822534	3.965725e-53	9.329758e-51
MsaG024159	MsaG045254	0.805017	2.763252e-49	4.191020e-47
MsaG024159	MsaG045309	0.854212	2.758584e-61	1.732756e-58
MsaG024159	MsaG045261	0.840402	1.643715e-57	6.498162e-55
MsaG024159	MsaG045283	0.842679	4.154090e-58	1.765556e-55
MsaG024159	MsaG045515	0.819261	2.228242e-52	4.806261e-50
MsaG024159	MsaG045550	0.849703	5.186641e-60	2.782829e-57
MsaG024159	MsaG045551	0.846991	2.891366e-59	1.415444e-56
MsaG024159	MsaG045589	0.820246	1.330255e-52	2.945013e-50
MsaG024159	MsaG045766	0.859696	6.787844e-63	5.216801e-60
MsaG024159	MsaG045828	0.807951	6.689472e-50	1.087355e-47
MsaG024159	MsaG045883	0.801332	1.586163e-48	2.210095e-46
MsaG024159	MsaG046223	0.856074	7.978766e-62	5.359241e-59
MsaG024159	MsaG046263	0.814490	2.591738e-51	4.946089e-49
MsaG024159	MsaG046380	0.809835	2.655910e-50	4.517691e-48
MsaG024159	MsaG046532	0.831110	3.622205e-55	1.082178e-52
MsaG024159	MsaG046491	0.829105	1.111902e-54	3.136440e-52
MsaG024159	MsaG046732	0.832813	1.381540e-55	4.337250e-53
MsaG024159	MsaG046804	0.815475	1.571214e-51	3.073944e-49
MsaG024159	MsaG046955	0.810188	2.231721e-50	3.828598e-48
MsaG024159	MsaG002505	0.859366	8.523831e-63	6.469537e-60
MsaG024159	MsaG001553	0.823585	2.261475e-53	5.473925e-51
MsaG024159	MsaG001996	0.842123	5.825902e-58	2.432108e-55
MsaG024159	MsaG001256	0.833917	7.353337e-56	2.384702e-53
MsaG024159	MsaG003316	0.818543	3.237462e-52	6.852805e-50
MsaG024159	MsaG004869	0.835449	3.040323e-56	1.032199e-53
MsaG024159	MsaG001683	0.852323	9.539333e-61	5.604828e-58
MsaG024159	MsaG002115	0.828575	1.491446e-54	4.144980e-52
MsaG024159	MsaG002776	0.865315	1.291122e-64	1.235297e-61
MsaG024159	MsaG002551	0.828435	1.612059e-54	4.462699e-52
MsaG024159	MsaG001614	0.868889	9.449428e-66	1.045398e-62
MsaG024159	MsaG007925	0.802933	7.456700e-49	1.077644e-46
MsaG024159	MsaG008690	0.802698	8.335741e-49	1.198174e-46
MsaG024159	MsaG011523	0.817560	5.389259e-52	1.112176e-49
MsaG024159	MsaG013383	0.803542	5.585807e-49	8.187120e-47
MsaG024159	MsaG013255	0.813298	4.734196e-51	8.768258e-49
MsaG024159	MsaG011720	0.831237	3.373534e-55	1.011533e-52
MsaG024159	MsaG019459	0.858118	2.003042e-62	1.450588e-59
MsaG024159	MsaG019026	0.824452	1.418612e-53	3.515619e-51
MsaG024159	MsaG019334	0.815441	1.598052e-51	3.123887e-49
MsaG024159	MsaG022732	0.833236	1.085532e-55	3.450857e-53
MsaG024159	MsaG020251	0.827050	3.454744e-54	9.198947e-52
MsaG024159	MsaG026416	0.807538	8.182082e-50	1.316806e-47
MsaG024159	MsaG025840	0.870371	3.124346e-66	3.677442e-63
MsaG024159	MsaG026810	0.807364	8.902042e-50	1.426744e-47
MsaG024159	MsaG026155	0.817138	6.697351e-52	1.367256e-49
MsaG024159	MsaG027119	0.832119	2.048731e-55	6.303987e-53
MsaG024159	MsaG027196	0.828103	1.936127e-54	5.309983e-52
MsaG024159	MsaG034393	0.848716	9.730505e-60	5.047618e-57
MsaG024159	MsaG032143	0.815094	1.907454e-51	3.695958e-49
MsaG024159	MsaG032019	0.814780	2.237848e-51	4.302053e-49
MsaG024159	MsaG034035	0.833485	9.416730e-56	3.015353e-53
MsaG024159	MsaG033091	0.813108	5.207683e-51	9.599705e-49
MsaG024159	MsaG034413	0.810154	2.269058e-50	3.889456e-48
MsaG024159	MsaG031111	0.855137	1.492779e-61	9.691142e-59
MsaG024159	MsaG032719	0.806579	1.302356e-49	2.049059e-47
MsaG024159	MsaG030868	0.847173	2.579021e-59	1.270301e-56
MsaG024159	MsaG034266	0.846890	3.081579e-59	1.503408e-56
MsaG024159	MsaG031897	0.846264	4.557261e-59	2.177475e-56
MsaG024159	MsaG030261	0.803862	4.798398e-49	7.085077e-47
MsaG024159	MsaG040050	0.839288	3.194464e-57	1.219501e-54
MsaG024159	MsaG037255	0.868656	1.123589e-65	1.231270e-62
MsaG024159	MsaG036465	0.819509	1.956650e-52	4.247867e-50
MsaG024159	MsaG037532	0.853427	4.628026e-61	2.826977e-58
MsaG024159	MsaG036656	0.828567	1.498318e-54	4.163126e-52
MsaG024159	MsaG041722	0.800961	1.887534e-48	2.607974e-46
MsaG024159	MsaG043527	0.809625	2.946014e-50	4.985627e-48
MsaG024159	MsaG042389	0.839064	3.649912e-57	1.383793e-54
MsaG024159	MsaG043311	0.813974	3.366525e-51	6.342030e-49
MsaG024159	MsaG044409	0.834249	6.078438e-56	1.990757e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG024159	MtrunA17_Chr8g0386501	98.104	211	4	0	1	211	1	211	5.17e-155	427
MsaG024159	MtrunA17_Chr3g0113051	60.656	183	64	1	1	175	1	183	2.74e-76	228
MsaG024159	MtrunA17_Chr8g0349391	59.538	173	68	1	1	171	1	173	8.41e-74	222
MsaG024159	MtrunA17_Chr7g0247111	53.302	212	95	2	1	208	1	212	8.41e-73	219
MsaG024159	MtrunA17_Chr1g0152431	55.367	177	67	4	1	167	1	175	1.68e-61	190
MsaG024159	MtrunA17_Chr4g0059371	52.000	175	77	2	2	169	3	177	4.95e-61	188
MsaG024159	MtrunA17_Chr4g0059371	50.704	71	35	0	93	163	2	72	3.28e-18	78.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG024159	AT3G61230.1	54.930	213	87	3	2	210	3	210	2.77e-79	236
MsaG024159	AT3G61230.1	53.425	73	34	0	93	165	2	74	1.35e-21	89.0
MsaG024159	AT2G45800.1	56.250	208	85	3	1	202	1	208	1.80e-77	232
MsaG024159	AT2G39900.1	61.538	182	63	2	1	175	1	182	4.22e-77	230
MsaG024159	AT3G55770.3	57.286	199	79	1	1	193	1	199	1.69e-75	226
MsaG024159	AT3G55770.5	57.286	199	79	1	1	193	1	199	1.69e-75	226
MsaG024159	AT3G55770.2	57.286	199	79	1	1	193	1	199	1.69e-75	226
MsaG024159	AT3G55770.1	57.286	199	79	1	1	193	1	199	1.69e-75	226
MsaG024159	AT1G01780.1	53.659	205	88	2	1	203	1	200	3.38e-74	223
MsaG024159	AT3G55770.7	48.927	233	79	2	1	193	1	233	5.59e-68	208
MsaG024159	AT1G10200.1	54.802	177	68	4	1	167	1	175	1.68e-61	190
MsaG024159	AT2G45800.2	54.217	166	70	3	43	202	12	177	3.71e-53	169
MsaG024159	AT2G45800.2	48.438	64	33	0	3	66	68	131	5.50e-15	70.9
MsaG024159	AT3G55770.4	53.906	128	53	1	1	122	1	128	4.31e-42	139
MsaG024159	AT3G55770.4	46.392	97	41	1	95	191	3	88	3.04e-23	91.3
MsaG024159	AT3G55770.6	54.098	122	50	1	1	116	1	122	4.15e-39	131
MsaG024159	AT3G55770.6	46.392	97	41	1	95	191	3	88	2.28e-23	91.3
MsaG024159	AT1G10200.2	51.145	131	54	3	46	167	4	133	1.36e-37	128
MsaG024159	AT1G10200.2	45.455	66	36	0	3	68	61	126	7.70e-15	69.3

Find 47 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATCCTATGCTGCTCTTGA+TGG	0.220465	4:-96514411	MsaT024159.1:CDS
ATTACCCGTCTGGGGTTTCT+TGG	0.257758	4:+96515169	None:intergenic
AAACTTTCTGCTTTCTTCTC+AGG	0.328680	4:-96514879	MsaT024159.1:CDS
TTTACCACAAGTCATGCTTT+AGG	0.384207	4:-96514464	MsaT024159.1:CDS
CACAAGCCTTGCATTTCTGT+TGG	0.387121	4:+96515795	None:intergenic
ACAAGCCTTGCATTTCTGTT+GGG	0.412168	4:+96515796	None:intergenic
AAAGGATCTTATTACCCGTC+TGG	0.436417	4:+96515159	None:intergenic
TCTGTCTCTGTGTCTGATGC+TGG	0.438805	4:+96514255	None:intergenic
TCTCAGTTGTTTAAGGCAAA+AGG	0.442224	4:-96514363	MsaT024159.1:CDS
ACCCGTCTGGGGTTTCTTGG+AGG	0.447284	4:+96515172	None:intergenic
AGAAAGCAGAAAGTTTGCTT+GGG	0.452697	4:+96514886	None:intergenic
GAAAGTTTGCTTGGGGCCCT+AGG	0.452962	4:+96514894	None:intergenic
AGCAGGAAAGCCTAGTGAAC+TGG	0.468952	4:-96515027	MsaT024159.1:intron
AACTTTCTGCTTTCTTCTCA+GGG	0.473345	4:-96514878	MsaT024159.1:CDS
TCAATAACCATGTCTTTCAC+TGG	0.477166	4:-96515821	None:intergenic
CAAGAAAACTGTATATCCAT+TGG	0.479463	4:-96514832	MsaT024159.1:CDS
AAGAAAGCAGAAAGTTTGCT+TGG	0.480734	4:+96514885	None:intergenic
AAGGATCTTATTACCCGTCT+GGG	0.489662	4:+96515160	None:intergenic
AACTGTATATCCATTGGAAA+AGG	0.494668	4:-96514826	MsaT024159.1:intron
TCAAGAGCAGCATAGGATGA+AGG	0.519729	4:+96514414	None:intergenic
CTGGGGTTTCTTGGAGGCGA+AGG	0.523891	4:+96515178	None:intergenic
CTTAAACAACTGAGAAAAGT+GGG	0.527258	4:+96514371	None:intergenic
GAATCCATCAAGAGCAGCAT+AGG	0.537698	4:+96514407	None:intergenic
GTTGATACGTTATCTGCTGA+TGG	0.547689	4:-96515755	MsaT024159.1:CDS
AGAATACACACCAGTTCACT+AGG	0.547764	4:+96515017	None:intergenic
CCTTAAACAACTGAGAAAAG+TGG	0.548044	4:+96514370	None:intergenic
TCATGCTTTAGGTGCACACA+TGG	0.562402	4:-96514453	MsaT024159.1:CDS
TACACCTCTTGTGTAACAGC+AGG	0.567186	4:+96514213	None:intergenic
CAAGAGCAGCATAGGATGAA+GGG	0.580724	4:+96514415	None:intergenic
TTGTGATAAAACTGTTCACT+TGG	0.580761	4:-96515777	MsaT024159.1:CDS
GCCTCCAAGAAACCCCAGAC+GGG	0.596184	4:-96515173	MsaT024159.1:intron
TGATCCTGCTGTTACACAAG+AGG	0.603788	4:-96514217	MsaT024159.1:CDS
AGACACAGAGACAGAGACAA+AGG	0.606794	4:-96514247	MsaT024159.1:CDS
CGCCTCCAAGAAACCCCAGA+CGG	0.608247	4:-96515174	MsaT024159.1:CDS
AGTAACTATCAATCAATCGA+AGG	0.610154	4:-96515245	MsaT024159.1:CDS
TTCAGATGTAATCAATGCAA+TGG	0.611041	4:-96515710	MsaT024159.1:CDS
CGTATGTATATACCGCGAGA+AGG	0.635292	4:+96515687	None:intergenic
TTATGACAGTTGACAGTGGA+AGG	0.635630	4:-96514492	MsaT024159.1:intron
GAAAGCAGAAAGTTTGCTTG+GGG	0.651424	4:+96514887	None:intergenic
AGGATCTTATTACCCGTCTG+GGG	0.652203	4:+96515161	None:intergenic
TGGAACCCAACAGAAATGCA+AGG	0.666590	4:-96515801	MsaT024159.1:CDS
TGCTTTAGGTGCACACATGG+AGG	0.676247	4:-96514450	MsaT024159.1:CDS
CTGTTTATGACAGTTGACAG+TGG	0.680767	4:-96514496	MsaT024159.1:intron
TTAAACAACTGAGAAAAGTG+GGG	0.688189	4:+96514372	None:intergenic
TTGGGTTCCAGTGAAAGACA+TGG	0.695332	4:+96515814	None:intergenic
TCAATGCAATGGCCTTCTCG+CGG	0.702963	4:-96515699	MsaT024159.1:intron
TGCACCTAAAGCATGACTTG+TGG	0.763367	4:+96514460	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	96514212	96515834	96514212	ID=MsaG024159
Chr4	mRNA	96514212	96515834	96514212	ID=MsaT024159.1;Parent=MsaG024159
Chr4	exon	96514212	96514505	96514212	ID=MsaT024159.1.exon5;Parent=MsaT024159.1
Chr4	CDS	96514212	96514505	96514212	ID=cds.MsaT024159.1;Parent=MsaT024159.1
Chr4	exon	96514827	96514916	96514827	ID=MsaT024159.1.exon4;Parent=MsaT024159.1
Chr4	CDS	96514827	96514916	96514827	ID=cds.MsaT024159.1;Parent=MsaT024159.1
Chr4	exon	96515028	96515047	96515028	ID=MsaT024159.1.exon3;Parent=MsaT024159.1
Chr4	CDS	96515028	96515047	96515028	ID=cds.MsaT024159.1;Parent=MsaT024159.1
Chr4	exon	96515174	96515270	96515174	ID=MsaT024159.1.exon2;Parent=MsaT024159.1
Chr4	CDS	96515174	96515270	96515174	ID=cds.MsaT024159.1;Parent=MsaT024159.1
Chr4	exon	96515700	96515834	96515700	ID=MsaT024159.1.exon1;Parent=MsaT024159.1
Chr4	CDS	96515700	96515834	96515700	ID=cds.MsaT024159.1;Parent=MsaT024159.1

Gene Sequence

>MsaT024159.1

ATGTCTTTCACTGGAACCCAACAGAAATGCAAGGCTTGTGATAAAACTGTTCACTTGGTTGATACGTTATCTGCTGATGGTAATGTTTTTCACAAGAACTGCTTCAGATGTAATCAATGCAATGGCCTTCTCGCGATGAGTAACTATCAATCAATCGAAGGAGTTTTATACTGCAAGACTCACGCTGAGCAGCTTTTCAAGGATTCCTTCGCCTCCAAGAAACCCCAGACGGCAGGAAAGCCTAGTGAACTGCCTAGGGCCCCAAGCAAACTTTCTGCTTTCTTCTCAGGGACTCAAGACAAATGTTCATCATGCAAGAAAACTGTATATCCATTGGAAAAGTTGACAGTGGAAGGTGAGTTTTACCACAAGTCATGCTTTAGGTGCACACATGGAGGATGTTTTCTCAGCCCTTCATCCTATGCTGCTCTTGATGGATTCATCTACTGCAAACCCCACTTTTCTCAGTTGTTTAAGGCAAAAGGTAGCTATAGTTATCTCTCTAAACAAGCTTCAATAAAGAAAAATGAAGAAATGCAACAAGCTGCAGCAGAGAAAAATGAATCAGCACCAGCATCAGACACAGAGACAGAGACAAAGGAAGAACATGATCCTGCTGTTACACAAGAGGTGTAG

Protein sequence

>MsaT024159.1

MSFTGTQQKCKACDKTVHLVDTLSADGNVFHKNCFRCNQCNGLLAMSNYQSIEGVLYCKTHAEQLFKDSFASKKPQTAGKPSELPRAPSKLSAFFSGTQDKCSSCKKTVYPLEKLTVEGEFYHKSCFRCTHGGCFLSPSSYAALDGFIYCKPHFSQLFKAKGSYSYLSKQASIKKNEEMQQAAAEKNESAPASDTETETKEEHDPAVTQEV*