AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG024247

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG024247 MtrunA17_Chr8g0387421 95.425 306 12 2 1 304 1 306 0.0 580
MsaG024247 MtrunA17_Chr8g0387411 92.655 177 2 1 317 482 1 177 6.17e-114 333
MsaG024247 MtrunA17_Chr5g0397231 59.467 338 88 15 1 300 1 327 4.83e-111 332
MsaG024247 MtrunA17_Chr5g0397241 90.132 152 9 2 317 465 1 149 1.44e-72 227
MsaG024247 MtrunA17_Chr2g0330041 76.471 119 28 0 1 119 1 119 1.47e-63 211
MsaG024247 MtrunA17_Chr8g0342541 73.228 127 34 0 1 127 1 127 3.85e-63 209
MsaG024247 MtrunA17_Chr8g0342521 70.149 134 40 0 1 134 1 134 6.62e-63 208
MsaG024247 MtrunA17_Chr1g0193371 72.034 118 33 0 1 118 1 118 2.69e-60 202
MsaG024247 MtrunA17_Chr7g0270891 72.034 118 33 0 1 118 1 118 7.98e-60 201
MsaG024247 MtrunA17_Chr4g0058631 72.269 119 33 0 1 119 1 119 2.20e-59 199
MsaG024247 MtrunA17_Chr1g0193801 69.492 118 36 0 1 118 1 118 5.05e-59 199
MsaG024247 MtrunA17_Chr2g0309911 73.276 116 30 1 1 116 1 115 1.36e-58 196
MsaG024247 MtrunA17_Chr3g0117091 69.748 119 36 0 1 119 1 119 8.54e-57 192
MsaG024247 MtrunA17_Chr1g0211161 70.085 117 35 0 3 119 4 120 9.53e-57 188
MsaG024247 MtrunA17_Chr8g0342481 72.650 117 31 1 1 116 1 117 1.40e-56 193
MsaG024247 MtrunA17_Chr7g0271241 72.477 109 30 0 1 109 1 109 7.61e-55 188
MsaG024247 MtrunA17_Chr1g0203411 65.254 118 41 0 1 118 1 118 2.68e-52 178
MsaG024247 MtrunA17_Chr5g0410961 65.254 118 41 0 1 118 1 118 6.82e-52 179
MsaG024247 MtrunA17_Chr3g0088461 67.273 110 36 0 8 117 18 127 1.64e-51 178
MsaG024247 MtrunA17_Chr2g0328771 49.412 170 74 1 12 169 20 189 3.03e-51 176
MsaG024247 MtrunA17_Chr4g0032401 68.182 110 35 0 11 120 16 125 4.77e-51 176
MsaG024247 MtrunA17_Chr5g0435101 64.602 113 40 0 6 118 5 117 1.08e-50 171
MsaG024247 MtrunA17_Chr6g0453471 61.864 118 45 0 1 118 1 118 1.26e-50 176
MsaG024247 MtrunA17_Chr3g0131121 58.209 134 49 1 1 127 1 134 2.35e-50 173
MsaG024247 MtrunA17_Chr8g0385321 64.655 116 41 0 1 116 1 116 2.35e-50 174
MsaG024247 MtrunA17_Chr4g0037141 48.851 174 76 3 1 171 1 164 7.05e-50 172
MsaG024247 MtrunA17_Chr3g0115821 60.345 116 46 0 1 116 1 116 1.52e-49 172
MsaG024247 MtrunA17_Chr6g0452271 47.486 179 72 3 1 157 1 179 1.58e-49 172
MsaG024247 MtrunA17_Chr4g0039971 62.069 116 44 0 1 116 2 117 1.96e-49 172
MsaG024247 MtrunA17_Chr1g0203441 66.667 108 36 0 11 118 12 119 2.58e-49 170
MsaG024247 MtrunA17_Chr4g0048511 63.866 119 42 1 1 118 1 119 2.88e-49 172
MsaG024247 MtrunA17_Chr7g0217221 43.396 212 97 4 1 194 1 207 3.89e-49 169
MsaG024247 MtrunA17_Chr2g0281071 63.025 119 43 1 1 118 1 119 1.08e-48 170
MsaG024247 MtrunA17_Chr3g0110351 47.778 180 85 2 1 171 1 180 1.20e-48 169
MsaG024247 MtrunA17_Chr7g0217741 60.169 118 47 0 1 118 1 118 1.32e-48 169
MsaG024247 MtrunA17_Chr2g0323411 62.712 118 44 0 1 118 1 118 2.23e-48 169
MsaG024247 MtrunA17_Chr4g0057031 63.559 118 43 0 1 118 1 118 2.48e-48 167
MsaG024247 MtrunA17_Chr5g0434571 61.864 118 45 0 1 118 37 154 1.04e-47 168
MsaG024247 MtrunA17_Chr4g0042671 51.656 151 62 1 1 140 1 151 1.08e-47 169
MsaG024247 MtrunA17_Chr1g0151941 61.538 117 44 1 1 116 1 117 1.08e-47 165
MsaG024247 MtrunA17_Chr7g0228891 62.393 117 44 0 1 117 1 117 3.15e-47 164
MsaG024247 MtrunA17_Chr5g0395281 66.355 107 36 0 12 118 12 118 3.26e-47 165
MsaG024247 MtrunA17_Chr7g0274581 46.386 166 87 2 1 166 1 164 7.51e-47 161
MsaG024247 MtrunA17_Chr4g0070641 55.303 132 57 1 1 130 1 132 1.17e-46 159
MsaG024247 MtrunA17_Chr4g0068061 57.937 126 53 0 1 126 1 126 1.86e-46 164
MsaG024247 MtrunA17_Chr4g0070611 55.303 132 57 1 1 130 1 132 2.42e-46 163
MsaG024247 MtrunA17_Chr1g0187761 59.350 123 50 0 1 123 1 123 3.79e-46 161
MsaG024247 MtrunA17_Chr6g0470971 58.015 131 44 2 11 130 13 143 4.79e-46 161
MsaG024247 MtrunA17_Chr8g0349261 61.864 118 43 2 1 116 1 118 5.69e-46 162
MsaG024247 MtrunA17_Chr7g0275911 58.974 117 48 0 1 117 1 117 7.22e-46 160
MsaG024247 MtrunA17_Chr3g0103281 60.345 116 46 0 1 116 1 116 8.34e-46 162
MsaG024247 MtrunA17_Chr8g0342511 77.011 87 20 0 1 87 1 87 1.27e-45 154
MsaG024247 MtrunA17_Chr8g0346561 53.788 132 61 0 1 132 1 132 1.27e-45 161
MsaG024247 MtrunA17_Chr8g0342531 71.277 94 27 0 1 94 1 94 1.57e-45 156
MsaG024247 MtrunA17_Chr4g0060721 57.258 124 53 0 1 124 2 125 3.47e-45 160
MsaG024247 MtrunA17_Chr7g0254411 50.968 155 70 2 1 149 1 155 4.90e-45 160
MsaG024247 MtrunA17_Chr1g0167661 49.660 147 72 1 1 145 1 147 1.39e-44 157
MsaG024247 MtrunA17_Chr4g0044421 59.322 118 48 0 1 118 1 118 1.71e-44 154
MsaG024247 MtrunA17_Chr2g0323351 56.198 121 53 0 7 127 7 127 2.81e-44 155
MsaG024247 MtrunA17_Chr2g0311221 61.468 109 42 0 2 110 4 112 5.29e-44 157
MsaG024247 MtrunA17_Chr4g0028311 59.829 117 46 1 1 116 1 117 9.26e-44 157
MsaG024247 MtrunA17_Chr7g0261281 47.742 155 78 1 1 155 1 152 9.78e-44 155
MsaG024247 MtrunA17_Chr3g0092401 43.915 189 98 4 6 194 7 187 2.21e-43 155
MsaG024247 MtrunA17_Chr1g0167691 56.897 116 50 0 1 116 1 116 3.76e-43 153
MsaG024247 MtrunA17_Chr1g0152011 35.294 272 163 6 1 269 1 262 3.99e-43 155
MsaG024247 MtrunA17_Chr3g0135311 58.974 117 47 1 1 116 1 117 4.54e-43 155
MsaG024247 MtrunA17_Chr3g0121241 59.459 111 45 0 6 116 36 146 4.96e-43 154
MsaG024247 MtrunA17_Chr4g0022911 48.148 135 70 0 5 139 6 140 7.21e-43 153
MsaG024247 MtrunA17_Chr7g0228231 44.086 186 95 3 1 184 1 179 7.84e-43 150
MsaG024247 MtrunA17_Chr1g0194951 58.268 127 51 1 1 127 1 125 8.03e-43 155
MsaG024247 MtrunA17_Chr7g0264641 58.120 117 48 1 1 116 1 117 1.25e-42 152
MsaG024247 MtrunA17_Chr6g0453211 59.167 120 49 0 6 125 6 125 1.81e-42 153
MsaG024247 MtrunA17_Chr4g0022931 57.143 112 48 0 5 116 6 117 2.53e-42 151
MsaG024247 MtrunA17_Chr5g0400821 57.265 117 49 1 1 116 1 117 6.23e-42 151
MsaG024247 MtrunA17_Chr8g0342461 68.421 95 29 1 1 94 1 95 6.46e-42 146
MsaG024247 MtrunA17_Chr2g0327351 58.559 111 45 1 1 110 1 111 1.15e-41 151
MsaG024247 MtrunA17_Chr8g0342471 69.565 92 27 1 1 91 1 92 2.21e-41 144
MsaG024247 MtrunA17_Chr4g0022901 56.757 111 48 0 5 115 6 116 4.18e-41 148
MsaG024247 MtrunA17_Chr6g0450101 55.833 120 51 1 1 118 1 120 8.79e-41 145
MsaG024247 MtrunA17_Chr1g0209661 56.410 117 51 0 9 125 24 140 1.37e-40 148
MsaG024247 MtrunA17_Chr7g0269831 49.390 164 67 3 1 164 1 148 1.60e-40 149
MsaG024247 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 2.36e-40 147
MsaG024247 MtrunA17_Chr6g0487491 49.351 154 66 3 1 142 1 154 3.14e-40 145
MsaG024247 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 6.71e-40 147
MsaG024247 MtrunA17_Chr8g0343831 57.798 109 46 0 10 118 6 114 7.26e-40 144
MsaG024247 MtrunA17_Chr1g0194291 55.932 118 52 0 8 125 17 134 1.99e-39 143
MsaG024247 MtrunA17_Chr5g0417821 58.095 105 44 0 12 116 7 111 2.63e-39 144
MsaG024247 MtrunA17_Chr4g0055981 52.308 130 59 1 9 135 52 181 4.27e-39 141
MsaG024247 MtrunA17_Chr1g0168661 47.761 134 70 0 4 137 13 146 1.05e-38 141
MsaG024247 MtrunA17_Chr3g0080861 58.491 106 44 0 12 117 37 142 1.85e-38 146
MsaG024247 MtrunA17_Chr4g0022881 58.252 103 43 0 12 114 12 114 5.26e-38 138
MsaG024247 MtrunA17_Chr4g0022891 56.863 102 44 0 12 113 12 113 2.74e-37 137
MsaG024247 MtrunA17_Chr3g0099131 57.009 107 46 0 12 118 41 147 3.63e-37 143
MsaG024247 MtrunA17_Chr1g0194301 54.386 114 52 0 12 125 33 146 5.36e-37 137
MsaG024247 MtrunA17_Chr1g0186061 50.000 124 62 0 5 128 13 136 1.05e-36 135
MsaG024247 MtrunA17_Chr8g0354661 55.660 106 47 0 12 117 37 142 1.14e-36 142
MsaG024247 MtrunA17_Chr7g0247131 72.973 74 20 0 44 117 10 83 1.17e-34 130
MsaG024247 MtrunA17_Chr4g0068921 54.386 114 52 0 12 125 24 137 1.51e-34 128
MsaG024247 MtrunA17_Chr8g0360111 56.311 103 45 0 8 110 21 123 1.56e-34 130
MsaG024247 MtrunA17_Chr1g0154031 54.717 106 48 0 12 117 76 181 1.58e-34 134
MsaG024247 MtrunA17_Chr2g0327821 46.400 125 67 0 9 133 3 127 1.97e-34 129
MsaG024247 MtrunA17_Chr1g0180391 39.877 163 83 3 12 174 19 166 4.43e-34 128
MsaG024247 MtrunA17_Chr4g0042611 59.091 88 36 0 1 88 1 88 1.42e-33 122
MsaG024247 MtrunA17_Chr7g0240821 44.186 129 72 0 17 145 6 134 1.49e-33 126
MsaG024247 MtrunA17_Chr2g0293911 53.390 118 55 0 8 125 20 137 2.33e-33 129
MsaG024247 MtrunA17_Chr5g0434911 50.000 110 55 0 7 116 16 125 3.31e-33 127
MsaG024247 MtrunA17_Chr7g0220341 54.206 107 47 1 12 116 25 131 5.37e-33 126
MsaG024247 MtrunA17_Chr5g0434931 51.429 105 51 0 12 116 35 139 7.34e-33 126
MsaG024247 MtrunA17_Chr4g0030881 36.058 208 114 4 6 194 1 208 1.25e-32 125
MsaG024247 MtrunA17_Chr2g0294811 55.682 88 39 0 1 88 1 88 1.73e-32 120
MsaG024247 MtrunA17_Chr2g0322521 54.717 106 48 0 12 117 29 134 2.61e-32 127
MsaG024247 MtrunA17_Chr5g0434831 51.429 105 51 0 12 116 7 111 6.65e-32 120
MsaG024247 MtrunA17_Chr1g0192411 37.912 182 100 4 11 189 11 182 7.03e-32 126
MsaG024247 MtrunA17_Chr7g0228991 51.429 105 51 0 12 116 29 133 1.79e-31 122
MsaG024247 MtrunA17_Chr8g0334881 48.696 115 58 1 4 117 2 116 3.72e-31 122
MsaG024247 MtrunA17_Chr5g0434841 49.524 105 53 0 12 116 20 124 4.06e-30 119
MsaG024247 MtrunA17_Chr5g0395221 62.338 77 29 0 12 88 12 88 1.86e-29 110
MsaG024247 MtrunA17_Chr2g0323321 54.651 86 39 0 7 92 6 91 1.97e-29 111
MsaG024247 MtrunA17_Chr5g0440781 48.148 108 54 2 12 118 12 118 2.08e-29 114
MsaG024247 MtrunA17_Chr4g0013361 46.789 109 57 1 12 119 10 118 1.31e-28 114
MsaG024247 MtrunA17_Chr5g0441141 48.148 108 54 2 12 118 12 118 1.41e-28 114
MsaG024247 MtrunA17_Chr5g0440761 48.148 108 54 2 12 118 12 118 1.42e-28 114
MsaG024247 MtrunA17_Chr5g0441131 46.789 109 53 2 12 119 9 113 4.46e-27 107
MsaG024247 MtrunA17_Chr3g0099141 49.425 87 44 0 8 94 36 122 1.09e-26 105
MsaG024247 MtrunA17_Chr5g0429661 41.593 113 65 1 14 126 122 233 2.74e-26 109
MsaG024247 MtrunA17_Chr5g0401731 48.246 114 56 2 4 115 3 115 5.89e-26 108
MsaG024247 MtrunA17_Chr6g0454921 50.980 102 49 1 14 115 15 115 1.35e-25 103
MsaG024247 MtrunA17_Chr4g0053431 50.000 102 50 1 14 115 5 105 1.59e-25 105
MsaG024247 MtrunA17_Chr4g0008551 47.059 102 53 1 14 115 38 138 2.99e-25 106
MsaG024247 MtrunA17_Chr6g0460661 39.200 125 72 3 11 134 13 134 2.24e-24 99.4
MsaG024247 MtrunA17_Chr6g0480581 46.667 105 55 1 14 118 4 107 2.88e-24 101
MsaG024247 MtrunA17_Chr5g0417621 43.750 112 62 1 11 122 131 241 5.52e-24 104
MsaG024247 MtrunA17_Chr5g0437321 50.485 103 49 2 8 110 14 114 1.13e-23 100
MsaG024247 MtrunA17_Chr4g0058991 37.879 132 81 1 12 143 207 337 1.37e-23 103
MsaG024247 MtrunA17_Chr3g0133601 47.273 110 55 2 8 115 29 137 1.38e-23 99.0
MsaG024247 MtrunA17_Chr4g0042501 44.037 109 60 1 14 122 105 212 1.82e-23 102
MsaG024247 MtrunA17_Chr7g0238631 46.602 103 54 1 14 116 113 214 2.59e-23 103
MsaG024247 MtrunA17_Chr3g0117511 36.154 130 82 1 14 143 183 311 6.03e-23 101
MsaG024247 MtrunA17_Chr7g0229131 54.795 73 33 0 44 116 4 76 6.31e-23 95.5
MsaG024247 MtrunA17_Chr7g0229101 58.571 70 29 0 44 113 4 73 7.20e-23 96.7
MsaG024247 MtrunA17_Chr5g0434901 60.000 65 26 0 46 110 7 71 1.02e-22 93.2
MsaG024247 MtrunA17_Chr3g0139671 44.037 109 60 1 14 122 85 192 1.50e-22 101
MsaG024247 MtrunA17_Chr3g0125801 47.222 108 54 2 14 120 16 121 3.84e-22 96.3
MsaG024247 MtrunA17_Chr7g0228531 40.323 124 69 3 3 126 212 330 1.37e-21 97.1
MsaG024247 MtrunA17_Chr1g0157731 41.964 112 64 1 11 122 88 198 1.89e-21 98.2
MsaG024247 MtrunA17_Chr5g0425591 46.988 83 43 1 12 93 9 91 4.39e-21 87.8
MsaG024247 MtrunA17_Chr6g0460671 41.284 109 63 1 14 122 99 206 1.05e-20 93.2
MsaG024247 MtrunA17_Chr1g0177901 47.674 86 44 1 25 110 5 89 3.22e-20 89.0
MsaG024247 MtrunA17_Chr3g0093811 50.667 75 37 0 44 118 14 88 6.17e-20 89.7
MsaG024247 MtrunA17_Chr6g0453751 45.055 91 41 2 12 93 20 110 9.73e-20 85.1
MsaG024247 MtrunA17_Chr5g0397841 44.118 102 55 2 8 109 105 204 1.52e-19 91.3
MsaG024247 MtrunA17_Chr7g0238651 35.714 126 79 1 14 137 7 132 1.95e-19 89.7
MsaG024247 MtrunA17_Chr7g0228401 47.674 86 44 1 25 110 290 374 2.57e-19 90.5
MsaG024247 MtrunA17_Chr7g0254261 40.741 108 63 1 14 121 89 195 2.38e-18 86.3
MsaG024247 MtrunA17_Chr7g0228481 38.136 118 68 3 12 126 218 333 4.38e-18 86.3
MsaG024247 MtrunA17_Chr7g0233061 45.679 81 42 1 48 128 211 289 1.25e-16 81.3
MsaG024247 MtrunA17_Chr1g0193901 55.000 60 26 1 10 68 9 68 8.28e-16 73.6
MsaG024247 MtrunA17_Chr1g0193891 55.000 60 26 1 10 68 9 68 8.28e-16 73.6
MsaG024247 MtrunA17_Chr1g0193871 55.000 60 26 1 10 68 9 68 8.28e-16 73.6
MsaG024247 MtrunA17_Chr1g0193881 55.000 60 26 1 10 68 9 68 8.28e-16 73.6
MsaG024247 MtrunA17_Chr5g0416341 35.644 101 64 1 17 117 29 128 1.04e-15 79.3
MsaG024247 MtrunA17_Chr8g0362231 38.393 112 67 2 17 128 25 134 1.09e-15 79.0
MsaG024247 MtrunA17_Chr2g0322831 53.704 54 18 1 70 123 34 80 1.76e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG024247 AT1G63910.1 47.790 362 105 15 1 289 1 351 8.97e-84 263
MsaG024247 AT4G25740.1 81.119 143 24 1 317 459 1 140 1.22e-68 217
MsaG024247 AT5G52650.1 82.222 135 24 0 317 451 1 135 5.90e-66 210
MsaG024247 AT3G13890.2 77.586 116 26 0 1 116 1 116 2.07e-63 210
MsaG024247 AT1G09540.1 73.729 118 31 0 1 118 1 118 2.37e-61 205
MsaG024247 AT4G01680.3 73.504 117 31 0 1 117 1 117 4.38e-61 200
MsaG024247 AT5G26660.1 72.881 118 32 0 1 118 1 118 4.67e-61 204
MsaG024247 AT4G01680.1 73.504 117 31 0 1 117 1 117 1.89e-60 201
MsaG024247 AT5G41520.1 74.658 146 31 5 317 459 1 143 2.74e-60 196
MsaG024247 AT3G13890.1 72.000 125 26 1 1 116 1 125 3.14e-60 202
MsaG024247 AT1G57560.1 70.339 118 35 0 1 118 1 118 4.33e-59 197
MsaG024247 AT1G57560.2 70.339 118 35 0 1 118 1 118 6.87e-59 195
MsaG024247 AT3G12720.1 72.566 113 31 0 4 116 14 126 5.63e-57 191
MsaG024247 AT4G01680.2 66.667 129 31 1 1 117 1 129 6.23e-57 192
MsaG024247 AT3G01140.2 44.041 193 84 2 1 169 1 193 7.54e-53 182
MsaG024247 AT5G12870.1 67.257 113 37 0 10 122 16 128 5.88e-52 177
MsaG024247 AT2G16720.1 62.931 116 43 0 1 116 1 116 3.46e-51 175
MsaG024247 AT3G01140.1 54.167 144 57 1 6 140 49 192 7.25e-51 178
MsaG024247 AT3G02940.2 63.793 116 42 0 1 116 1 116 7.76e-51 175
MsaG024247 AT5G15310.4 61.864 118 45 0 1 118 1 118 1.00e-50 173
MsaG024247 AT5G15310.1 61.864 118 45 0 1 118 1 118 1.28e-50 175
MsaG024247 AT4G05100.1 63.866 119 42 1 1 118 1 119 1.42e-50 175
MsaG024247 AT5G15310.2 61.864 118 45 0 1 118 1 118 1.55e-50 175
MsaG024247 AT3G02940.1 63.793 116 42 0 1 116 1 116 1.55e-50 175
MsaG024247 AT3G02940.3 63.793 116 42 0 1 116 1 116 1.55e-50 175
MsaG024247 AT4G09460.1 60.504 119 47 0 1 119 1 119 2.33e-50 172
MsaG024247 AT3G08500.1 50.299 167 73 2 4 160 19 185 3.55e-50 175
MsaG024247 AT4G34990.1 62.931 116 43 0 1 116 1 116 4.15e-50 172
MsaG024247 AT4G21440.1 41.532 248 104 6 1 221 1 234 1.54e-49 173
MsaG024247 AT4G38620.1 61.207 116 45 0 1 116 1 116 1.65e-49 171
MsaG024247 AT1G22640.1 50.000 156 69 1 1 147 1 156 1.70e-49 170
MsaG024247 AT5G60890.1 59.322 118 48 0 1 118 1 118 3.35e-49 171
MsaG024247 AT4G25740.2 63.190 163 41 1 317 479 1 144 3.74e-49 166
MsaG024247 AT5G49330.1 57.778 135 57 0 1 135 1 135 5.38e-49 171
MsaG024247 AT4G28110.1 61.864 118 45 0 1 118 1 118 9.88e-49 169
MsaG024247 AT3G61250.1 62.069 116 44 0 1 116 1 116 1.02e-48 169
MsaG024247 AT5G16770.4 61.207 116 45 0 1 116 1 116 1.18e-48 170
MsaG024247 AT5G16770.3 61.207 116 45 0 1 116 1 116 1.18e-48 170
MsaG024247 AT5G10280.1 60.345 116 46 0 1 116 1 116 1.21e-48 170
MsaG024247 AT1G66230.1 62.712 118 44 0 1 118 1 118 1.52e-48 168
MsaG024247 AT4G17785.2 63.248 117 42 1 1 116 1 117 1.70e-48 170
MsaG024247 AT1G34670.1 60.345 116 46 0 1 116 1 116 2.44e-48 170
MsaG024247 AT5G16770.1 61.207 116 45 0 1 116 1 116 2.72e-48 169
MsaG024247 AT5G16770.2 61.207 116 45 0 1 116 1 116 2.72e-48 169
MsaG024247 AT4G17785.1 63.248 117 42 1 1 116 1 117 2.77e-48 170
MsaG024247 AT3G47600.1 57.895 133 56 0 1 133 1 133 2.80e-48 169
MsaG024247 AT4G12350.1 60.169 118 47 0 1 118 1 118 4.34e-48 167
MsaG024247 AT5G65230.1 61.207 116 45 0 1 116 1 116 5.59e-48 168
MsaG024247 AT3G23250.1 54.688 128 58 0 1 128 1 128 9.65e-48 166
MsaG024247 AT4G22680.1 61.017 118 46 0 1 118 1 118 1.44e-47 165
MsaG024247 AT5G16600.1 61.017 118 46 0 1 118 1 118 2.19e-47 167
MsaG024247 AT2G31180.1 51.553 161 74 2 1 159 1 159 2.29e-47 164
MsaG024247 AT5G54230.1 63.559 118 43 0 1 118 1 118 3.27e-47 166
MsaG024247 AT1G18570.1 62.185 119 44 1 1 118 1 119 3.66e-47 167
MsaG024247 AT1G08810.1 53.147 143 61 1 1 137 1 143 9.12e-47 164
MsaG024247 AT1G35515.1 59.483 116 47 0 1 116 1 116 1.22e-46 161
MsaG024247 AT5G56110.1 60.345 116 46 0 1 116 1 116 1.81e-46 164
MsaG024247 AT1G06180.1 58.015 131 54 1 1 131 1 130 1.87e-46 162
MsaG024247 AT5G61420.2 58.621 116 48 0 1 116 1 116 5.19e-46 164
MsaG024247 AT5G07690.1 59.483 116 47 0 1 116 1 116 8.19e-46 163
MsaG024247 AT2G47460.1 57.252 131 52 1 1 127 1 131 8.46e-46 164
MsaG024247 AT1G79180.1 48.408 157 79 1 2 156 4 160 1.67e-45 160
MsaG024247 AT5G14340.1 43.646 181 100 1 1 181 13 191 4.61e-45 159
MsaG024247 AT1G56160.1 60.870 115 45 0 2 116 4 118 6.80e-45 159
MsaG024247 AT1G74080.1 59.322 118 48 0 1 118 1 118 6.99e-45 160
MsaG024247 AT5G62470.2 55.725 131 58 0 1 131 1 131 7.83e-45 160
MsaG024247 AT3G62610.1 54.478 134 59 1 1 134 1 132 8.03e-45 160
MsaG024247 AT5G07700.1 57.759 116 49 0 1 116 1 116 9.41e-45 160
MsaG024247 AT5G07700.2 57.759 116 49 0 1 116 1 116 9.41e-45 160
MsaG024247 AT1G74430.1 51.449 138 63 1 1 134 1 138 1.89e-44 157
MsaG024247 AT5G23000.1 59.829 117 46 1 1 116 1 117 2.88e-44 159
MsaG024247 AT1G74650.1 61.207 116 45 0 1 116 1 116 4.02e-44 158
MsaG024247 AT1G16490.1 59.130 115 47 0 2 116 4 118 4.71e-44 156
MsaG024247 AT3G48920.1 51.938 129 60 1 8 134 14 142 6.46e-44 155
MsaG024247 AT3G28910.1 59.664 119 48 0 6 124 6 124 1.65e-43 156
MsaG024247 AT2G36890.1 60.684 117 45 1 1 116 1 117 3.16e-43 155
MsaG024247 AT3G13540.1 57.018 114 49 0 6 119 17 130 4.18e-43 153
MsaG024247 AT5G62470.1 55.725 131 57 1 1 131 1 130 4.19e-43 156
MsaG024247 AT3G28470.1 57.273 110 47 0 1 110 1 110 5.08e-43 155
MsaG024247 AT2G36890.2 60.684 117 45 1 1 116 42 158 5.41e-43 155
MsaG024247 AT5G52260.1 55.200 125 56 0 9 133 9 133 5.45e-43 153
MsaG024247 AT5G35550.1 46.875 160 80 1 9 163 11 170 1.35e-42 152
MsaG024247 AT4G25560.1 59.821 112 45 0 10 121 8 119 1.82e-42 152
MsaG024247 AT3G49690.1 58.120 117 48 1 1 116 1 117 3.48e-42 152
MsaG024247 AT5G57620.1 57.265 117 49 1 1 116 1 117 4.18e-42 153
MsaG024247 AT1G18710.1 55.932 118 52 0 1 118 1 118 1.69e-41 149
MsaG024247 AT5G40350.1 48.966 145 70 2 11 152 16 159 1.79e-41 147
MsaG024247 AT3G27810.1 51.538 130 57 1 9 138 17 140 2.18e-41 147
MsaG024247 AT5G62320.1 50.382 131 58 1 2 125 3 133 3.92e-41 147
MsaG024247 AT5G40330.1 56.481 108 47 0 9 116 9 116 4.55e-41 147
MsaG024247 AT3G12820.1 58.407 113 47 0 6 118 8 120 4.68e-41 147
MsaG024247 AT5G14750.1 57.692 104 44 0 13 116 17 120 5.65e-41 146
MsaG024247 AT3G27920.1 54.237 118 54 0 10 127 12 129 6.91e-41 146
MsaG024247 AT4G37780.1 55.556 117 51 1 1 116 1 117 9.84e-41 148
MsaG024247 AT5G52600.1 54.032 124 50 1 12 135 12 128 1.03e-40 145
MsaG024247 AT5G65790.1 56.410 117 50 1 1 116 1 117 1.04e-40 150
MsaG024247 AT3G01530.1 47.826 161 73 3 12 169 25 177 1.81e-40 144
MsaG024247 AT1G79180.2 40.000 190 79 2 2 156 4 193 6.12e-39 144
MsaG024247 AT3G24310.1 54.167 120 55 0 13 132 19 138 7.94e-39 142
MsaG024247 AT1G68320.1 56.897 116 50 0 10 125 17 132 1.29e-38 142
MsaG024247 AT2G32460.1 58.491 106 44 0 12 117 18 123 1.84e-38 146
MsaG024247 AT2G32460.2 58.491 106 44 0 12 117 6 111 2.09e-38 146
MsaG024247 AT1G48000.1 55.652 115 51 0 11 125 31 145 2.42e-38 140
MsaG024247 AT4G26930.1 57.944 107 45 0 12 118 19 125 2.53e-38 144
MsaG024247 AT5G06100.1 57.547 106 45 0 12 117 32 137 1.36e-37 143
MsaG024247 AT3G30210.1 42.697 178 82 4 13 176 28 199 2.33e-37 138
MsaG024247 AT5G55020.1 56.075 107 47 0 12 118 26 132 2.52e-37 144
MsaG024247 AT2G47190.1 41.104 163 89 1 12 174 20 175 2.63e-37 138
MsaG024247 AT2G26960.1 46.259 147 76 1 9 155 17 160 3.01e-37 142
MsaG024247 AT4G13480.1 55.000 120 47 1 13 132 7 119 3.02e-37 137
MsaG024247 AT5G06100.5 56.481 108 47 0 10 117 30 137 3.74e-37 143
MsaG024247 AT5G06100.2 56.481 108 47 0 10 117 30 137 3.74e-37 143
MsaG024247 AT5G06100.3 56.481 108 47 0 10 117 30 137 3.74e-37 143
MsaG024247 AT5G06100.4 56.481 108 47 0 10 117 30 137 3.74e-37 143
MsaG024247 AT3G11440.2 54.717 106 48 0 12 117 41 146 4.24e-36 139
MsaG024247 AT1G25340.1 53.097 113 53 0 13 125 19 131 7.57e-36 134
MsaG024247 AT5G26660.2 70.000 80 24 0 39 118 8 87 9.53e-36 135
MsaG024247 AT3G11440.3 54.717 106 48 0 12 117 41 146 1.92e-35 139
MsaG024247 AT3G11440.4 54.717 106 48 0 12 117 41 146 1.92e-35 139
MsaG024247 AT3G11440.1 54.717 106 48 0 12 117 41 146 1.92e-35 139
MsaG024247 AT5G41520.2 75.000 100 20 4 362 459 1 97 4.92e-35 127
MsaG024247 AT3G06490.1 55.932 118 52 0 8 125 15 132 9.41e-35 132
MsaG024247 AT3G47600.2 55.455 110 45 1 24 133 22 127 1.85e-33 129
MsaG024247 AT1G66370.1 46.667 120 64 0 12 131 8 127 3.76e-33 126
MsaG024247 AT5G49620.1 53.846 117 54 0 9 125 23 139 7.19e-33 127
MsaG024247 AT5G59780.3 49.091 110 56 0 9 118 5 114 2.28e-32 124
MsaG024247 AT3G60460.1 49.107 112 56 1 7 117 6 117 1.15e-31 124
MsaG024247 AT1G25340.2 50.442 113 51 1 13 125 19 126 3.62e-31 122
MsaG024247 AT3G53200.1 49.533 107 54 0 9 115 6 112 4.77e-31 120
MsaG024247 AT1G25340.3 50.442 113 51 1 13 125 19 126 7.11e-31 122
MsaG024247 AT3G46130.1 50.485 103 51 0 13 115 10 112 7.63e-31 120
MsaG024247 AT1G66380.1 53.846 104 48 0 12 115 8 111 1.69e-30 115
MsaG024247 AT3G27810.2 55.319 94 36 1 45 138 4 91 4.38e-30 115
MsaG024247 AT5G40350.2 50.450 111 51 2 45 152 5 114 6.99e-30 115
MsaG024247 AT1G66390.1 53.846 104 48 0 12 115 8 111 9.31e-30 117
MsaG024247 AT5G49620.2 48.092 131 54 1 9 125 23 153 2.29e-29 117
MsaG024247 AT1G56650.1 52.885 104 49 0 12 115 8 111 2.77e-29 115
MsaG024247 AT5G35550.2 46.774 124 61 1 45 163 50 173 4.21e-29 115
MsaG024247 AT2G26950.1 48.936 94 48 0 17 110 21 114 3.11e-28 115
MsaG024247 AT5G14750.3 63.768 69 25 0 48 116 18 86 2.27e-27 108
MsaG024247 AT3G12820.2 66.197 71 24 0 48 118 2 72 8.79e-27 107
MsaG024247 AT5G59780.2 59.211 76 31 0 43 118 18 93 2.07e-26 107
MsaG024247 AT5G11050.1 36.306 157 92 3 10 159 101 256 3.36e-26 110
MsaG024247 AT3G46130.3 60.000 75 30 0 44 118 9 83 3.79e-26 106
MsaG024247 AT3G46130.4 61.644 73 28 0 43 115 18 90 6.18e-26 106
MsaG024247 AT5G58850.1 42.373 118 65 2 14 129 105 221 2.55e-25 108
MsaG024247 AT1G69560.1 46.281 121 60 3 5 122 96 214 3.04e-25 106
MsaG024247 AT3G27785.1 46.789 109 54 2 12 120 187 291 4.48e-25 107
MsaG024247 AT1G69560.2 46.281 121 60 3 5 122 112 230 4.80e-25 106
MsaG024247 AT1G26780.1 47.273 110 55 2 14 122 98 205 1.54e-24 103
MsaG024247 AT1G26780.2 47.273 110 55 2 14 122 98 205 1.92e-24 104
MsaG024247 AT5G40360.1 33.117 154 98 3 12 161 156 308 4.37e-24 103
MsaG024247 AT3G53200.2 56.579 76 33 0 40 115 4 79 6.54e-24 99.8
MsaG024247 AT2G23290.1 50.000 102 50 1 14 115 13 113 3.08e-23 100
MsaG024247 AT5G02320.1 45.045 111 60 1 14 124 127 236 3.28e-23 103
MsaG024247 AT5G02320.2 45.045 111 60 1 14 124 127 236 3.28e-23 103
MsaG024247 AT5G02320.3 45.045 111 60 1 14 124 67 176 3.37e-23 102
MsaG024247 AT3G55730.1 41.606 137 78 2 9 145 52 186 5.20e-23 101
MsaG024247 AT4G37260.1 47.222 108 55 2 8 115 8 113 5.40e-23 99.8
MsaG024247 AT4G18770.1 37.705 122 75 1 14 135 217 337 5.58e-23 101
MsaG024247 AT1G17950.1 44.860 107 58 1 14 120 5 110 8.50e-23 97.8
MsaG024247 AT3G50060.1 46.078 102 54 1 14 115 6 106 1.36e-22 98.2
MsaG024247 AT3G09230.1 39.850 133 76 2 14 146 55 183 1.54e-22 99.8
MsaG024247 AT3G09370.2 47.059 102 53 1 14 115 135 235 2.40e-22 100
MsaG024247 AT3G09370.1 47.059 102 53 1 14 115 130 230 2.59e-22 100
MsaG024247 AT3G09370.3 47.059 102 53 1 14 115 143 243 3.63e-22 99.8
MsaG024247 AT1G22640.3 46.465 99 44 1 58 147 1 99 3.91e-22 94.4
MsaG024247 AT5G67300.1 47.059 102 53 1 14 115 6 106 4.11e-22 97.1
MsaG024247 AT4G33450.1 39.837 123 73 1 13 135 18 139 5.24e-22 95.5
MsaG024247 AT2G39880.1 46.729 107 55 2 9 115 46 150 6.69e-22 97.4
MsaG024247 AT3G29020.1 40.367 109 64 1 14 122 65 172 8.14e-22 94.4
MsaG024247 AT1G66380.3 59.722 72 29 0 44 115 7 78 9.21e-22 90.5
MsaG024247 AT3G29020.2 40.367 109 64 1 14 122 67 174 1.13e-21 95.9
MsaG024247 AT5G11510.3 42.857 112 63 1 11 122 78 188 1.55e-21 99.0
MsaG024247 AT5G11510.1 42.857 112 63 1 11 122 78 188 1.55e-21 99.0
MsaG024247 AT5G11510.4 42.857 112 63 1 11 122 78 188 1.55e-21 99.0
MsaG024247 AT5G11510.2 42.857 112 63 1 11 122 78 188 2.12e-21 98.2
MsaG024247 AT5G11510.5 42.857 112 63 1 11 122 78 188 2.16e-21 98.2
MsaG024247 AT3G23250.2 54.930 71 32 0 58 128 1 71 4.56e-21 92.4
MsaG024247 AT1G73410.1 44.860 107 58 1 14 120 6 111 6.43e-21 92.0
MsaG024247 AT5G17800.1 39.831 118 70 1 1 118 80 196 7.45e-21 93.6
MsaG024247 AT2G25230.1 34.586 133 86 1 17 149 29 160 8.71e-21 91.7
MsaG024247 AT4G32730.5 41.071 112 65 1 11 122 84 194 1.12e-20 96.3
MsaG024247 AT4G32730.4 41.071 112 65 1 11 122 84 194 1.12e-20 96.3
MsaG024247 AT4G32730.3 41.071 112 65 1 11 122 84 194 1.12e-20 96.3
MsaG024247 AT4G32730.2 41.071 112 65 1 11 122 84 194 1.12e-20 96.3
MsaG024247 AT1G73410.2 44.860 107 58 1 14 120 6 111 1.32e-20 90.1
MsaG024247 AT4G32730.1 41.071 112 65 1 11 122 84 194 1.42e-20 95.5
MsaG024247 AT1G18960.1 41.584 101 54 3 17 116 13 109 6.23e-20 90.9
MsaG024247 AT1G71030.2 39.604 101 56 1 51 146 5 105 9.58e-20 87.0
MsaG024247 AT1G71030.1 38.889 108 60 2 44 146 13 119 1.04e-19 87.4
MsaG024247 AT1G66380.2 49.398 83 42 0 12 94 8 90 4.50e-19 83.2
MsaG024247 AT5G14750.4 57.627 59 25 0 58 116 1 59 6.11e-19 83.6
MsaG024247 AT5G14750.2 57.627 59 25 0 58 116 1 59 6.11e-19 83.6
MsaG024247 AT1G14350.2 37.500 112 69 1 17 128 28 138 5.91e-18 86.7
MsaG024247 AT1G14350.1 37.500 112 69 1 17 128 28 138 5.91e-18 86.7
MsaG024247 AT5G39700.1 35.246 122 78 1 9 130 51 171 9.91e-18 81.6
MsaG024247 AT2G37630.1 36.207 116 72 1 13 126 3 118 9.47e-17 82.0
MsaG024247 AT2G02820.3 37.624 101 62 1 17 117 33 132 9.63e-17 81.6
MsaG024247 AT2G02820.1 37.624 101 62 1 17 117 33 132 1.05e-16 82.8
MsaG024247 AT2G02820.2 37.624 101 62 1 17 117 33 132 1.11e-16 82.8
MsaG024247 AT5G40430.1 30.000 130 89 2 12 141 52 179 2.82e-16 79.0
MsaG024247 AT4G00540.2 38.938 113 65 2 12 121 101 212 5.13e-16 80.5
MsaG024247 AT4G00540.1 38.938 113 65 2 12 121 99 210 7.49e-16 80.1
MsaG024247 AT5G59780.1 57.143 49 21 0 70 118 1 49 9.35e-13 67.0
MsaG024247 AT3G46130.2 57.143 49 21 0 70 118 1 49 2.66e-12 66.2
MsaG024247 AT4G25560.2 55.769 52 23 0 70 121 2 53 6.26e-12 65.5
MsaG024247 AT1G14350.3 38.356 73 45 0 56 128 23 95 1.88e-11 66.2
MsaG024247 AT1G14350.4 38.356 73 45 0 56 128 23 95 1.88e-11 66.2
MsaG024247 AT3G28910.2 61.905 42 16 0 77 118 1 42 2.86e-11 64.3
MsaG024247 AT1G74650.3 65.000 40 14 0 77 116 1 40 4.83e-11 63.5

Find 124 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTAATCACCTGCAAATT+TGG 0.141151 4:+97372844 None:intergenic
ACCACCAAATTCATCAAATA+TGG 0.189419 4:-97378638 MsaT024247.1:CDS
GGTCGTGGATCTGGTGGTTT+TGG 0.201005 4:-97371431 MsaT024247.1:CDS
TGCCAAATTGAAATCCTTCT+TGG 0.227664 4:+97372888 None:intergenic
GGGTCTAAACGATGGAATTT+TGG 0.238910 4:+97373685 None:intergenic
GGAGAAAACAAGGTTGTTTC+TGG 0.256153 4:+97379024 None:intergenic
TCTCCTCTCCCCTTCAAATC+TGG 0.263606 4:+97372530 None:intergenic
GGAGGTCCTCGTGGTGAATT+TGG 0.264246 4:-97372480 MsaT024247.1:CDS
TATTCTCTTGGTTGGAAAAC+TGG 0.273736 4:+97379064 None:intergenic
TTGCTTGGATGAATTATTAC+TGG 0.274951 4:-97372780 MsaT024247.1:CDS
TGCCAAGAAGGATTTCAATT+TGG 0.277902 4:-97372890 MsaT024247.1:CDS
GTTCCCATATTTGATGAATT+TGG 0.278649 4:+97378634 None:intergenic
TTTGAAGGGGAGAGGAGATT+TGG 0.304539 4:-97372525 MsaT024247.1:CDS
AAATTTGGAACATCGATTTC+TGG 0.305282 4:+97372859 None:intergenic
TCCCAGAAAAGAAAGTTATT+AGG 0.327528 4:+97378703 None:intergenic
CAGGGTCCTGGTGGAAGGCC+TGG 0.329758 4:-97371458 MsaT024247.1:CDS
ACAATGAAATAAAGAATTAC+TGG 0.332830 4:-97379209 MsaT024247.1:CDS
TAAAGAATTACTGGAATTCA+TGG 0.339337 4:-97379200 MsaT024247.1:CDS
AAGCCACCTGGTAGACCTTT+TGG 0.340230 4:-97372670 MsaT024247.1:CDS
GAGCCCGGTGATTCATTTCA+TGG 0.344990 4:-97378979 MsaT024247.1:CDS
TTGCTGTTGTTATATTCTCT+TGG 0.350771 4:+97379052 None:intergenic
AACCTTCCTCTTCTAATATC+AGG 0.353809 4:+97380324 None:intergenic
TGTCTTGTTGTGCAGGGTCC+TGG 0.359491 4:-97371470 MsaT024247.1:intron
CCTGGATTTGGTCGTGGATC+TGG 0.375183 4:-97371440 MsaT024247.1:CDS
TTGGAGGAGGTAGTGATGAT+TGG 0.377550 4:+97378866 None:intergenic
GAAGACTGACCAGCTTTGTC+TGG 0.378100 4:+97380590 None:intergenic
TTCACAGTGTTGTTGGCAAC+AGG 0.382667 4:-97380269 MsaT024247.1:intron
TTCTGGGACAATATTGTTCA+AGG 0.397659 4:-97378688 MsaT024247.1:CDS
CCTGGTGGAAGGCCTGGATT+TGG 0.398371 4:-97371452 MsaT024247.1:CDS
ATTAGCCTTCACAGTGTTGT+TGG 0.407577 4:-97380276 MsaT024247.1:CDS
AATCGATGTTCCAAATTTGC+AGG 0.408613 4:-97372854 MsaT024247.1:CDS
ATAATTAACTTCTCCTCATC+AGG 0.409106 4:+97380297 None:intergenic
TTATACCGTTTATAGAATCT+TGG 0.426214 4:+97378911 None:intergenic
CTCCTCTCCCCTTCAAATCT+GGG 0.426727 4:+97372531 None:intergenic
GCTTGTTTCTTCAAAGTAGC+AGG 0.433371 4:+97372694 None:intergenic
TACTTCCAAGATTCTATAAA+CGG 0.434921 4:-97378916 MsaT024247.1:CDS
TAGAATGCTTGCAGAGTCAA+TGG 0.439026 4:-97378747 MsaT024247.1:CDS
AGAAGGTTAAGAGAGGTCTT+TGG 0.444852 4:-97380682 MsaT024247.1:CDS
TTGTGCAGGGTCCTGGTGGA+AGG 0.448944 4:-97371463 MsaT024247.1:intron
CTTTAAGCATCTGAGCTAGT+TGG 0.449096 4:+97371401 None:intergenic
ATTGTTCAAGGGCATGGACT+TGG 0.450777 4:-97378676 MsaT024247.1:CDS
AATAATTTATCCATCTCAAT+CGG 0.463684 4:+97380352 None:intergenic
GAAGGGGAGAGGAGATTTGG+TGG 0.472199 4:-97372522 MsaT024247.1:CDS
TGTTGTTATATTCTCTTGGT+TGG 0.473413 4:+97379056 None:intergenic
CCACCAAATTCATCAAATAT+GGG 0.474503 4:-97378637 MsaT024247.1:CDS
TTATGCAGAGCTTCAAATCA+AGG 0.477684 4:-97372822 MsaT024247.1:CDS
GTTCAAGGGCATGGACTTGG+TGG 0.480608 4:-97378673 MsaT024247.1:CDS
AGGGGTCCACCCAGATTTGA+AGG 0.489080 4:-97372540 MsaT024247.1:CDS
CCACTCATGGCTATGGCTGT+TGG 0.495505 4:-97380622 MsaT024247.1:CDS
ATTAGAATTATAATTGAGGT+GGG 0.501076 4:+97379098 None:intergenic
GGTACTTGCAGATCTCTTTG+CGG 0.502239 4:+97373025 None:intergenic
AATATAATATACCTTGGAAA+AGG 0.503793 4:+97373004 None:intergenic
TACTGGTTTCTCACTAATGA+CGG 0.504599 4:-97372763 MsaT024247.1:CDS
TTCAAGGGCATGGACTTGGT+GGG 0.505959 4:-97378672 MsaT024247.1:CDS
GACAATATTGTTCAAGGGCA+TGG 0.513323 4:-97378682 MsaT024247.1:CDS
TTATATTAGAATTATAATTG+AGG 0.523372 4:+97379094 None:intergenic
GTCCACAGGGTGATCGTCCT+AGG 0.525900 4:-97372645 MsaT024247.1:intron
TAAGCATCTGAGCTAGTTGG+AGG 0.527305 4:+97371404 None:intergenic
ATCACTTACATTACCACTCA+TGG 0.527630 4:-97380635 MsaT024247.1:CDS
CACCCAGATTTGAAGGGGAG+AGG 0.528752 4:-97372533 MsaT024247.1:CDS
ATGTTAGAGAAACCTTTGCT+TGG 0.529285 4:-97372795 MsaT024247.1:CDS
TACATTACCACTCATGGCTA+TGG 0.531044 4:-97380629 MsaT024247.1:CDS
AAAGTTGTTGATATTGGAGG+AGG 0.535605 4:+97378853 None:intergenic
GGAAGGCCTGGATTTGGTCG+TGG 0.535608 4:-97371446 MsaT024247.1:CDS
CCAGATCCACGACCAAATCC+AGG 0.536843 4:+97371440 None:intergenic
TATTAGAATTATAATTGAGG+TGG 0.537844 4:+97379097 None:intergenic
GAAAACAAGGTTGTTTCTGG+TGG 0.547757 4:+97379027 None:intergenic
TTAAGACCTGATATTAGAAG+AGG 0.550895 4:-97380330 MsaT024247.1:CDS
TCACCCTGTGGACCACCAAA+AGG 0.552245 4:+97372655 None:intergenic
AACATAAACAAAGGGCATGT+GGG 0.552285 4:+97379003 None:intergenic
ATTTCATTGTCAGTTCTACC+AGG 0.553828 4:+97379222 None:intergenic
CGGGCTCAAACATAAACAAA+GGG 0.554670 4:+97378995 None:intergenic
GTAATAATTCATCCAAGCAA+AGG 0.557485 4:+97372783 None:intergenic
AAACATAAACAAAGGGCATG+TGG 0.559335 4:+97379002 None:intergenic
TGTTCCATGAAATGAATCAC+CGG 0.561446 4:+97378975 None:intergenic
CTTGTTGTGCAGGGTCCTGG+TGG 0.561938 4:-97371467 MsaT024247.1:intron
TCAAGGGCATGGACTTGGTG+GGG 0.562532 4:-97378671 MsaT024247.1:CDS
CCCATATTTGATGAATTTGG+TGG 0.563290 4:+97378637 None:intergenic
CACATTGCAAGTCACTTACC+TGG 0.565343 4:-97379240 MsaT024247.1:CDS
CCAAATCCAGGCCTTCCACC+AGG 0.566613 4:+97371452 None:intergenic
AGAATCTTGGAAGTATTGAT+CGG 0.567267 4:+97378924 None:intergenic
ACGGTATAAGCTCTGAAACA+TGG 0.571232 4:-97378897 MsaT024247.1:CDS
GGGTGTATGCTATGCCAAGA+AGG 0.572773 4:-97372902 MsaT024247.1:CDS
TCTGGGACAATATTGTTCAA+GGG 0.578297 4:-97378687 MsaT024247.1:CDS
AGTGAAGTTCCAGACAAAGC+TGG 0.579211 4:-97380599 MsaT024247.1:intron
GATTTGGTGGTGACCGTGAT+GGG 0.582420 4:-97372509 MsaT024247.1:CDS
GGGGTCCACCCAGATTTGAA+GGG 0.582776 4:-97372539 MsaT024247.1:CDS
ACCACCTTTGATAGAGAATG+TGG 0.583136 4:-97378806 MsaT024247.1:CDS
GTAGCAGGAACAATCTCAGA+AGG 0.584325 4:+97372709 None:intergenic
CTCTCCCCTTCAAATCTGGG+TGG 0.586327 4:+97372534 None:intergenic
GGATTTGGTCGTGGATCTGG+TGG 0.587952 4:-97371437 MsaT024247.1:CDS
AAGAAACAAGCTAAGCCACC+TGG 0.590290 4:-97372682 MsaT024247.1:CDS
GGACCACCAAAAGGTCTACC+AGG 0.594043 4:+97372664 None:intergenic
CCTTTGTTTATGTTTGAGCC+CGG 0.594664 4:-97378994 MsaT024247.1:CDS
TTCTTGCTGCAATCAACAGA+AGG 0.596356 4:-97380699 MsaT024247.1:CDS
TCCACATTCTCTATCAAAGG+TGG 0.596829 4:+97378805 None:intergenic
TAATCAGGGCTTCAAAGATG+TGG 0.602301 4:-97380384 MsaT024247.1:intron
AGAATGCTTGCAGAGTCAAT+GGG 0.603509 4:-97378746 MsaT024247.1:CDS
GGTCCTCGTGGTGAATTTGG+AGG 0.607108 4:-97372477 MsaT024247.1:CDS
AGGGCATGTGGGAGAAAACA+AGG 0.610416 4:+97379014 None:intergenic
GTAAGAGTTGCCGATTGAGA+TGG 0.611865 4:-97380362 MsaT024247.1:CDS
TGGTGAATTTGGAGGAGACA+AGG 0.613678 4:-97372469 MsaT024247.1:CDS
GACGAGGAAGCAGATCATAG+AGG 0.616597 4:-97378775 MsaT024247.1:CDS
CCGGGCTCAAACATAAACAA+AGG 0.617355 4:+97378994 None:intergenic
TATGCAGAGCTTCAAATCAA+GGG 0.617426 4:-97372821 MsaT024247.1:CDS
GACCTCCACGGTACCCATCA+CGG 0.617977 4:+97372496 None:intergenic
GGTGACCGTGATGGGTACCG+TGG 0.630160 4:-97372501 MsaT024247.1:CDS
AGGAAGGTTTACACCTGATG+AGG 0.633114 4:-97380310 MsaT024247.1:CDS
GATAGAGAATGTGGAAAACA+TGG 0.635293 4:-97378797 MsaT024247.1:CDS
AGATTTGGTGGTGACCGTGA+TGG 0.637024 4:-97372510 MsaT024247.1:CDS
GTTCCATGAAATGAATCACC+GGG 0.637744 4:+97378976 None:intergenic
TGTTGCCAACAACACTGTGA+AGG 0.638450 4:+97380271 None:intergenic
GACCTGATATTAGAAGAGGA+AGG 0.643800 4:-97380326 MsaT024247.1:CDS
GAATGTGGAAAACATGGACG+AGG 0.646679 4:-97378791 MsaT024247.1:CDS
GGGTCCACCCAGATTTGAAG+GGG 0.646728 4:-97372538 MsaT024247.1:CDS
GACCGTGATGGGTACCGTGG+AGG 0.672660 4:-97372498 MsaT024247.1:CDS
ATTCACCACGAGGACCTCCA+CGG 0.674159 4:+97372484 None:intergenic
CCAACAGCCATAGCCATGAG+TGG 0.685006 4:+97380622 None:intergenic
AATCAACAGAAGGTTAAGAG+AGG 0.686133 4:-97380689 MsaT024247.1:CDS
GGGTACCGTGGAGGTCCTCG+TGG 0.696695 4:-97372489 MsaT024247.1:CDS
TGAATTTGGAGGAGACAAGG+AGG 0.717749 4:-97372466 MsaT024247.1:intron
TACCTAGGACGATCACCCTG+TGG 0.729018 4:+97372643 None:intergenic
CCACCAAAAGGTCTACCAGG+TGG 0.744640 4:+97372667 None:intergenic
TCTCCTCCAAATTCACCACG+AGG 0.768981 4:+97372474 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 97371403 97380732 97371403 ID=MsaG024247
Chr4 mRNA 97371403 97380732 97371403 ID=MsaT024247.1;Parent=MsaG024247
Chr4 exon 97371403 97371477 97371403 ID=MsaT024247.1.exon8;Parent=MsaT024247.1
Chr4 CDS 97371403 97371477 97371403 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97372467 97372560 97372467 ID=MsaT024247.1.exon7;Parent=MsaT024247.1
Chr4 CDS 97372467 97372560 97372467 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97372646 97372925 97372646 ID=MsaT024247.1.exon6;Parent=MsaT024247.1
Chr4 CDS 97372646 97372925 97372646 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97373016 97373064 97373016 ID=MsaT024247.1.exon5;Parent=MsaT024247.1
Chr4 CDS 97373016 97373064 97373016 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97373695 97373741 97373695 ID=MsaT024247.1.exon4;Parent=MsaT024247.1
Chr4 CDS 97373695 97373741 97373695 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97378629 97379269 97378629 ID=MsaT024247.1.exon3;Parent=MsaT024247.1
Chr4 CDS 97378629 97379269 97378629 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97380270 97380399 97380270 ID=MsaT024247.1.exon2;Parent=MsaT024247.1
Chr4 CDS 97380270 97380399 97380270 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Chr4 exon 97380600 97380732 97380600 ID=MsaT024247.1.exon1;Parent=MsaT024247.1
Chr4 CDS 97380600 97380732 97380600 ID=cds.MsaT024247.1;Parent=MsaT024247.1
Gene Sequence

>MsaT024247.1

ATGGGTCAGCATTCTTGCTGCAATCAACAGAAGGTTAAGAGAGGTCTTTGGTCCCCTGAAGAAGATGAAAAACTCATCACTTACATTACCACTCATGGCTATGGCTGTTGGAGTGAAGTTCCAGACAAAGCTGGGCTTCAAAGATGTGGTAAGAGTTGCCGATTGAGATGGATAAATTATTTAAGACCTGATATTAGAAGAGGAAGGTTTACACCTGATGAGGAGAAGTTAATTATTAGCCTTCACAGTGTTGTTGGCAACAGATGGGCTCACATTGCAAGTCACTTACCTGGTAGAACTGACAATGAAATAAAGAATTACTGGAATTCATGGATCAAAAAGAAAATAAGAAAGCATTCATCAAGCTCTAATTCAACCACTAATAATGTTACACAAAATGTTGTTCATCATTCCCACCTCAATTATAATTCTAATATAAAATTAGACCAGTTTTCCAACCAAGAGAATATAACAACAGCAAAACCACCAGAAACAACCTTGTTTTCTCCCACATGCCCTTTGTTTATGTTTGAGCCCGGTGATTCATTTCATGGAACAACAACAGAAAACAGTAATAATCTGCAAACCGATCAATACTTCCAAGATTCTATAAACGGTATAAGCTCTGAAACATGGAATCAAGTCCAATCATCACTACCTCCTCCAATATCAACAACTTTTTCAATGGACACAATGAATTATCTACCACCTTTGATAGAGAATGTGGAAAACATGGACGAGGAAGCAGATCATAGAGGAGTACTAGAATGCTTGCAGAGTCAATGGGTAGAAACACATCAACAATGTCCTAATAACTTTCTTTTCTGGGACAATATTGTTCAAGGGCATGGACTTGGTGGGGAAGAACAACTACCACCAAATTCATCAAATATGGGAACAAACAAAGGGACTTCTTACGAGACTCCGCCCCTCAAAATCCAAAATTCCATCATCATATCTGAGAAAAACCGCAAAGAGATCTGCAAGTACCTTTTCCAAGAGGGTGTATGCTATGCCAAGAAGGATTTCAATTTGGCAAAGCATCCAGAAATCGATGTTCCAAATTTGCAGGTGATTAAGCTTATGCAGAGCTTCAAATCAAGGGAATATGTTAGAGAAACCTTTGCTTGGATGAATTATTACTGGTTTCTCACTAATGACGGAATTGAGTTTCTCAGAACTTACTTGAATCTTCCTTCTGAGATTGTTCCTGCTACTTTGAAGAAACAAGCTAAGCCACCTGGTAGACCTTTTGGTGGTCCACAGGGTGATCGTCCTAGGGGTCCACCCAGATTTGAAGGGGAGAGGAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCTCGTGGTGAATTTGGAGGAGACAAGGAGGGTCCTGGTGGAAGGCCTGGATTTGGTCGTGGATCTGGTGGTTTTGGGGCTCCTCCAACTAGCTCAGATGCTTAA
Protein sequence

>MsaT024247.1

MGQHSCCNQQKVKRGLWSPEEDEKLITYITTHGYGCWSEVPDKAGLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKHSSSSNSTTNNVTQNVVHHSHLNYNSNIKLDQFSNQENITTAKPPETTLFSPTCPLFMFEPGDSFHGTTTENSNNLQTDQYFQDSINGISSETWNQVQSSLPPPISTTFSMDTMNYLPPLIENVENMDEEADHRGVLECLQSQWVETHQQCPNNFLFWDNIVQGHGLGGEEQLPPNSSNMGTNKGTSYETPPLKIQNSIIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPQGDRPRGPPRFEGERRFGGDRDGYRGGPRGEFGGDKEGPGGRPGFGRGSGGFGAPPTSSDA*