Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG024429 | XP_013447300.1 | 94.010 | 384 | 15 | 3 | 1 | 379 | 1 | 381 | 0.0 | 716 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG024429 | sp|Q9M0G2|C3H49_ARATH | 54.308 | 383 | 137 | 14 | 1 | 373 | 1 | 355 | 4.08e-125 | 367 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG024429 | tr|A0A072TV59|A0A072TV59_MEDTR | 94.010 | 384 | 15 | 3 | 1 | 379 | 1 | 381 | 0.0 | 716 |
Gene ID | Type | Classification |
---|---|---|
MsaG024429 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000049 | MsaG024429 | 0.808619 | 4.826535e-50 | 7.972450e-48 |
MsaG001127 | MsaG024429 | 0.803889 | 4.736503e-49 | 6.998069e-47 |
MsaG002061 | MsaG024429 | 0.801381 | 1.550310e-48 | 2.162506e-46 |
MsaG003590 | MsaG024429 | 0.825804 | 6.824472e-54 | 1.755264e-51 |
MsaG006102 | MsaG024429 | 0.821883 | 5.605252e-53 | 1.295863e-50 |
MsaG007308 | MsaG024429 | 0.818281 | 3.710479e-52 | 7.800818e-50 |
MsaG007566 | MsaG024429 | 0.830270 | 5.803603e-55 | 1.692651e-52 |
MsaG008049 | MsaG024429 | 0.809941 | 2.520959e-50 | 4.298904e-48 |
MsaG008183 | MsaG024429 | 0.814591 | 2.462212e-51 | 4.710729e-49 |
MsaG010431 | MsaG024429 | 0.818991 | 2.565213e-52 | 5.493842e-50 |
MsaG010432 | MsaG024429 | 0.829588 | 8.496254e-55 | 2.430125e-52 |
MsaG010757 | MsaG024429 | 0.818193 | 3.882871e-52 | 8.144965e-50 |
MsaG011401 | MsaG024429 | 0.820927 | 9.295960e-53 | 2.095330e-50 |
MsaG011539 | MsaG024429 | 0.800437 | 2.411216e-48 | 3.292493e-46 |
MsaG012310 | MsaG024429 | 0.805093 | 2.663885e-49 | 4.047358e-47 |
MsaG015820 | MsaG024429 | 0.802041 | 1.136152e-48 | 1.608773e-46 |
MsaG017849 | MsaG024429 | 0.806949 | 1.088753e-49 | 1.727884e-47 |
MsaG017867 | MsaG024429 | 0.812663 | 6.512174e-51 | 1.187187e-48 |
MsaG024429 | MsaG025252 | 0.802024 | 1.145607e-48 | 1.621494e-46 |
MsaG024429 | MsaG027490 | 0.803643 | 5.324097e-49 | 7.821505e-47 |
MsaG024429 | MsaG028787 | 0.802472 | 9.273754e-49 | 1.326170e-46 |
MsaG024429 | MsaG028794 | 0.814847 | 2.162651e-51 | 4.164504e-49 |
MsaG024429 | MsaG028772 | 0.817390 | 5.883277e-52 | 1.208839e-49 |
MsaG024429 | MsaG028773 | 0.844128 | 1.712280e-58 | 7.624781e-56 |
MsaG024429 | MsaG029128 | 0.832726 | 1.451654e-55 | 4.546032e-53 |
MsaG024429 | MsaG031647 | 0.803307 | 6.246306e-49 | 9.105357e-47 |
MsaG024429 | MsaG036211 | 0.829746 | 7.780766e-55 | 2.235458e-52 |
MsaG024429 | MsaG041770 | 0.801953 | 1.184362e-48 | 1.673684e-46 |
MsaG024429 | MsaG041810 | 0.801392 | 1.541846e-48 | 2.151256e-46 |
MsaG024429 | MsaG041813 | 0.804072 | 4.339743e-49 | 6.439552e-47 |
MsaG024429 | MsaG041826 | 0.816958 | 7.350466e-52 | 1.493579e-49 |
MsaG024429 | MsaG042105 | 0.835627 | 2.742820e-56 | 9.361370e-54 |
MsaG024429 | MsaG017605 | 0.834565 | 5.066193e-56 | 1.675070e-53 |
MsaG024429 | MsaG028048 | 0.821828 | 5.771531e-53 | 1.332311e-50 |
MsaG024429 | MsaG027785 | 0.827448 | 2.776872e-54 | 7.476959e-52 |
MsaG024429 | MsaG033084 | 0.839071 | 3.636057e-57 | 1.378795e-54 |
MsaG024429 | MsaG033169 | 0.806489 | 1.360694e-49 | 2.136240e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG024429 | MtrunA17_Chr8g0389561 | 94.010 | 384 | 15 | 3 | 1 | 379 | 1 | 381 | 0.0 | 716 |
MsaG024429 | MtrunA17_Chr6g0487481 | 55.366 | 410 | 112 | 8 | 1 | 373 | 1 | 376 | 1.97e-141 | 407 |
MsaG024429 | MtrunA17_Chr3g0135351 | 44.242 | 330 | 114 | 9 | 46 | 374 | 18 | 278 | 6.05e-77 | 239 |
MsaG024429 | MtrunA17_Chr4g0040391 | 71.818 | 110 | 31 | 0 | 75 | 184 | 54 | 163 | 6.27e-58 | 191 |
MsaG024429 | MtrunA17_Chr2g0324781 | 74.757 | 103 | 26 | 0 | 81 | 183 | 77 | 179 | 4.62e-57 | 191 |
MsaG024429 | MtrunA17_Chr7g0257831 | 72.897 | 107 | 29 | 0 | 77 | 183 | 260 | 366 | 3.54e-54 | 190 |
MsaG024429 | MtrunA17_Chr5g0430211 | 46.025 | 239 | 97 | 9 | 77 | 283 | 226 | 464 | 7.18e-53 | 186 |
MsaG024429 | MtrunA17_Chr3g0088521 | 51.515 | 165 | 70 | 2 | 77 | 235 | 260 | 420 | 1.47e-51 | 183 |
MsaG024429 | MtrunA17_Chr5g0437251 | 54.037 | 161 | 70 | 1 | 77 | 237 | 213 | 369 | 1.03e-50 | 180 |
MsaG024429 | MtrunA17_Chr3g0092221 | 66.379 | 116 | 38 | 1 | 68 | 183 | 146 | 260 | 1.34e-50 | 174 |
MsaG024429 | MtrunA17_Chr1g0171151 | 63.551 | 107 | 39 | 0 | 77 | 183 | 240 | 346 | 9.44e-49 | 174 |
MsaG024429 | MtrunA17_Chr1g0187591 | 67.290 | 107 | 35 | 0 | 77 | 183 | 225 | 331 | 2.44e-47 | 170 |
MsaG024429 | MtrunA17_Chr3g0113651 | 49.693 | 163 | 54 | 3 | 77 | 237 | 159 | 295 | 2.47e-47 | 168 |
MsaG024429 | MtrunA17_Chr3g0092171 | 47.024 | 168 | 78 | 4 | 77 | 243 | 271 | 428 | 3.64e-46 | 165 |
MsaG024429 | MtrunA17_Chr3g0105141 | 56.410 | 117 | 50 | 1 | 75 | 190 | 30 | 146 | 1.65e-44 | 151 |
MsaG024429 | MtrunA17_Chr3g0105121 | 46.914 | 162 | 75 | 4 | 79 | 238 | 7 | 159 | 3.53e-40 | 145 |
MsaG024429 | MtrunA17_Chr3g0105131 | 55.140 | 107 | 34 | 1 | 77 | 183 | 176 | 268 | 3.18e-33 | 129 |
MsaG024429 | MtrunA17_Chr3g0105101 | 68.056 | 72 | 23 | 0 | 112 | 183 | 195 | 266 | 2.58e-30 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG024429 | AT4G29190.1 | 54.308 | 383 | 137 | 14 | 1 | 373 | 1 | 355 | 4.15e-126 | 367 |
MsaG024429 | AT2G19810.1 | 51.309 | 382 | 153 | 10 | 1 | 373 | 1 | 358 | 5.50e-114 | 337 |
MsaG024429 | AT2G25900.2 | 44.904 | 363 | 138 | 9 | 1 | 350 | 1 | 314 | 1.73e-90 | 275 |
MsaG024429 | AT2G25900.1 | 44.904 | 363 | 138 | 9 | 1 | 350 | 1 | 314 | 1.73e-90 | 275 |
MsaG024429 | AT1G03790.1 | 63.433 | 134 | 48 | 1 | 52 | 184 | 53 | 186 | 4.67e-58 | 194 |
MsaG024429 | AT5G44260.1 | 68.548 | 124 | 30 | 2 | 62 | 184 | 49 | 164 | 2.15e-55 | 187 |
MsaG024429 | AT2G41900.1 | 71.028 | 107 | 31 | 0 | 77 | 183 | 257 | 363 | 3.50e-53 | 187 |
MsaG024429 | AT5G12850.1 | 71.963 | 107 | 30 | 0 | 77 | 183 | 253 | 359 | 5.05e-53 | 187 |
MsaG024429 | AT3G55980.1 | 46.829 | 205 | 94 | 4 | 77 | 278 | 207 | 399 | 1.27e-51 | 181 |
MsaG024429 | AT3G55980.2 | 46.829 | 205 | 94 | 4 | 77 | 278 | 274 | 466 | 3.22e-51 | 181 |
MsaG024429 | AT5G58620.1 | 69.159 | 107 | 33 | 0 | 77 | 183 | 205 | 311 | 7.41e-51 | 179 |
MsaG024429 | AT5G07500.1 | 63.333 | 120 | 42 | 1 | 66 | 183 | 35 | 154 | 9.51e-51 | 170 |
MsaG024429 | AT2G40140.2 | 53.459 | 159 | 69 | 1 | 77 | 235 | 210 | 363 | 1.06e-48 | 174 |
MsaG024429 | AT2G40140.1 | 53.459 | 159 | 69 | 1 | 77 | 235 | 210 | 363 | 1.06e-48 | 174 |
Find 125 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAGTCTGGGAGAGATATA+AGG | 0.228314 | 4:-99369552 | MsaT024429.1:CDS |
GGAGCTGGTGAGCCCTTTCT+TGG | 0.256293 | 4:-99369431 | MsaT024429.1:CDS |
GGGTCGGATCACGGGTCCTC+TGG | 0.290200 | 4:+99369684 | None:intergenic |
GTGATGGAGAGGGTGGAGTC+TGG | 0.299570 | 4:-99369565 | MsaT024429.1:CDS |
AATGGATCGGGTTCAGGTTC+GGG | 0.301747 | 4:-99369490 | MsaT024429.1:CDS |
TCCGGATGTTGGGTGGGTTT+CGG | 0.313054 | 4:-99369452 | MsaT024429.1:CDS |
CGTTGGTAGGCTACAGAATC+CGG | 0.322086 | 4:+99369663 | None:intergenic |
CAACTTCCTTTACGAAAATC+AGG | 0.327092 | 4:+99370159 | None:intergenic |
CTCACACGGCGGAGCAACTT+AGG | 0.327174 | 4:-99370014 | MsaT024429.1:CDS |
CACACCGCCGCCATGATGTT+AGG | 0.327724 | 4:-99370552 | None:intergenic |
TGAAGTCATTACCTTCTTCA+TGG | 0.329074 | 4:-99369741 | MsaT024429.1:CDS |
TTCTCGCCGGGATGAGAAAA+AGG | 0.329763 | 4:+99370231 | None:intergenic |
CCGGAGTAGTTATACTTTCT+CGG | 0.332203 | 4:+99370192 | None:intergenic |
TAATGGATCGGGTTCAGGTT+CGG | 0.338161 | 4:-99369491 | MsaT024429.1:CDS |
TGTTGGGTGGGTTTCGGAGC+TGG | 0.339180 | 4:-99369446 | MsaT024429.1:CDS |
CGCATGGTGTGTTCGAGTGC+TGG | 0.340661 | 4:-99370110 | MsaT024429.1:CDS |
TAATCGTCGTTGGAGGTTAA+AGG | 0.353804 | 4:+99370447 | None:intergenic |
GCCGTTGGATTGTTCATTGT+TGG | 0.354051 | 4:+99370483 | None:intergenic |
GACCGAGTCATCGGAGTAAT+CGG | 0.354759 | 4:+99369838 | None:intergenic |
CAAATGGGTTCTCCTAGATT+CGG | 0.355364 | 4:-99369712 | MsaT024429.1:CDS |
TTCTTCATGGAATGTTCAAA+TGG | 0.360051 | 4:-99369728 | MsaT024429.1:CDS |
TACTCCGATGACTCGGTCCT+TGG | 0.371166 | 4:-99369833 | MsaT024429.1:CDS |
CGTATGACGGTTCTCCTCTC+AGG | 0.385313 | 4:-99369948 | MsaT024429.1:CDS |
CGTAAAGGAAGTTGCAAGAA+AGG | 0.403608 | 4:-99370150 | MsaT024429.1:CDS |
ACAAACTGGCCGGCGACAAC+TGG | 0.411554 | 4:+99370044 | None:intergenic |
TTGTTCATTGTTGGCCATGC+TGG | 0.418920 | 4:+99370492 | None:intergenic |
TGAAGAAGGTAATGACTTCA+TGG | 0.429121 | 4:+99369744 | None:intergenic |
TCCTCCTGGATCGGTTTCTC+CGG | 0.431746 | 4:-99369881 | MsaT024429.1:CDS |
GAGCTGGTGAGCCCTTTCTT+GGG | 0.442916 | 4:-99369430 | MsaT024429.1:CDS |
ACACCGCCGCCATGATGTTA+GGG | 0.445475 | 4:-99370551 | None:intergenic |
CGGAGTAGTTATACTTTCTC+GGG | 0.448222 | 4:+99370193 | None:intergenic |
CCTCTGGGAGACCCGAATCT+AGG | 0.450232 | 4:+99369700 | None:intergenic |
GGGTGAAGTGGTTGAAGATC+CGG | 0.455522 | 4:-99369470 | MsaT024429.1:CDS |
CAGAATCCGGGTCGGATCAC+GGG | 0.457628 | 4:+99369676 | None:intergenic |
AACATTCAATCACCCAAGAA+AGG | 0.463244 | 4:+99369418 | None:intergenic |
TTCGGCGATGCGCACGTGGC+AGG | 0.465958 | 4:-99370275 | MsaT024429.1:CDS |
CTTCCGTTCATGTCTCCTCC+TGG | 0.466787 | 4:-99369895 | MsaT024429.1:CDS |
TCCGAAACCCACCCAACATC+CGG | 0.467976 | 4:+99369451 | None:intergenic |
ATCAACGCAGTGCACACTCC+GGG | 0.469752 | 4:+99369972 | None:intergenic |
GTTCATGTCTCCTCCTGGAT+CGG | 0.471938 | 4:-99369890 | MsaT024429.1:CDS |
TCACACGGCGGAGCAACTTA+GGG | 0.475617 | 4:-99370013 | MsaT024429.1:CDS |
ACTCCGATGACTCGGTCCTT+GGG | 0.476813 | 4:-99369832 | MsaT024429.1:CDS |
GGAGTCTGGGAGAGATATAA+GGG | 0.478478 | 4:-99369551 | MsaT024429.1:CDS |
ATTTGAACATTCCATGAAGA+AGG | 0.481692 | 4:+99369730 | None:intergenic |
CGGCGGCGAGCTTTCTCGCC+GGG | 0.483303 | 4:+99370219 | None:intergenic |
CGCAGGTGCCGAGTCGTGGT+AGG | 0.483561 | 4:-99369633 | MsaT024429.1:CDS |
GGTCGGATCACGGGTCCTCT+GGG | 0.485156 | 4:+99369685 | None:intergenic |
CGTCTTTACACGGCTGAGTA+CGG | 0.485485 | 4:+99370070 | None:intergenic |
GACTCCACCCTCTCCATCAC+AGG | 0.494303 | 4:+99369568 | None:intergenic |
TCTTCATGGAATGTTCAAAT+GGG | 0.500081 | 4:-99369727 | MsaT024429.1:CDS |
CTCCGACTCAACAGAGTCCC+CGG | 0.512371 | 4:-99369990 | MsaT024429.1:CDS |
TCGGTCCTTGGGAAGATCTG+TGG | 0.513782 | 4:-99369821 | MsaT024429.1:CDS |
TCCACCGGAGAAACCGATCC+AGG | 0.514556 | 4:+99369877 | None:intergenic |
TGGTTGAAGATCCGGATGTT+GGG | 0.514839 | 4:-99369462 | MsaT024429.1:CDS |
ACAGAATCCGGGTCGGATCA+CGG | 0.517668 | 4:+99369675 | None:intergenic |
TTCTAGCTCTGTGAATGAAA+TGG | 0.520762 | 4:-99369797 | MsaT024429.1:CDS |
TCCTGGATCGGTTTCTCCGG+TGG | 0.521510 | 4:-99369878 | MsaT024429.1:CDS |
ACGGCGGCGAGCTTTCTCGC+CGG | 0.522012 | 4:+99370218 | None:intergenic |
TGATGGAGAGGGTGGAGTCT+GGG | 0.525229 | 4:-99369564 | MsaT024429.1:CDS |
CGGTCCTTGGGAAGATCTGT+GGG | 0.525368 | 4:-99369820 | MsaT024429.1:CDS |
TTGAAGATCCGGATGTTGGG+TGG | 0.525953 | 4:-99369459 | MsaT024429.1:CDS |
CACGTGGCAGGTCACATGAC+TGG | 0.526588 | 4:-99370263 | MsaT024429.1:CDS |
CTTCCCAAGGACCGAGTCAT+CGG | 0.527368 | 4:+99369829 | None:intergenic |
AAAATCAGGACACGAAGTGC+CGG | 0.531042 | 4:+99370173 | None:intergenic |
GCATGTTCGAGTTTAAGATT+CGG | 0.531245 | 4:-99370293 | MsaT024429.1:CDS |
ACATTCAATCACCCAAGAAA+GGG | 0.534836 | 4:+99369419 | None:intergenic |
CTCCGGGGACTCTGTTGAGT+CGG | 0.537123 | 4:+99369988 | None:intergenic |
AAATGGGTTCTCCTAGATTC+GGG | 0.537187 | 4:-99369711 | MsaT024429.1:CDS |
AGTTATACTTTCTCGGGTCA+CGG | 0.538971 | 4:+99370199 | None:intergenic |
CCTGCGTAGGTGTCGTTGGT+AGG | 0.548899 | 4:+99369650 | None:intergenic |
CAACTGGTTCCGTCTTTACA+CGG | 0.558745 | 4:+99370060 | None:intergenic |
CGTACTCAGCCGTGTAAAGA+CGG | 0.559308 | 4:-99370069 | MsaT024429.1:CDS |
TGAAGATCCGGATGTTGGGT+GGG | 0.561336 | 4:-99369458 | MsaT024429.1:CDS |
CTCCGATTACTCCGATGACT+CGG | 0.561730 | 4:-99369840 | MsaT024429.1:CDS |
GGGTTCAGGTTCGGGTGAAG+TGG | 0.562356 | 4:-99369482 | MsaT024429.1:CDS |
GTGGTTGAAGATCCGGATGT+TGG | 0.565014 | 4:-99369463 | MsaT024429.1:CDS |
AGGTGGTTCCCCTAACATCA+TGG | 0.567452 | 4:+99370542 | None:intergenic |
GACTCAATAGCAAGCCTGAG+AGG | 0.570639 | 4:+99369934 | None:intergenic |
AGAGCCTGTGATGGAGAGGG+TGG | 0.580941 | 4:-99369572 | MsaT024429.1:CDS |
GTTGGATTTGTACGATGAGG+TGG | 0.581590 | 4:+99370525 | None:intergenic |
TGGCCATGCTGGAACGTGTA+CGG | 0.582344 | 4:+99370503 | None:intergenic |
AATCAACGCAGTGCACACTC+CGG | 0.582408 | 4:+99369971 | None:intergenic |
TCTCTGAGAAACTTACAACT+TGG | 0.583296 | 4:-99369769 | MsaT024429.1:CDS |
AGGAAGAGCCTGTGATGGAG+AGG | 0.585551 | 4:-99369576 | MsaT024429.1:CDS |
GGCACCTGCGTAGGTGTCGT+TGG | 0.587787 | 4:+99369646 | None:intergenic |
CACTGCGTTGATTCGTATGA+CGG | 0.588289 | 4:-99369961 | MsaT024429.1:CDS |
CTGAGGATAATCGTCGTTGG+AGG | 0.595113 | 4:+99370440 | None:intergenic |
CGACGACACCGATTCCGACT+CGG | 0.598832 | 4:-99370367 | MsaT024429.1:CDS |
AGAGGACCCGTGATCCGACC+CGG | 0.601883 | 4:-99369682 | MsaT024429.1:CDS |
GTTGGTAGGCTACAGAATCC+GGG | 0.603145 | 4:+99369664 | None:intergenic |
TTGCGAGGAAGAGCCTGTGA+TGG | 0.605419 | 4:-99369581 | MsaT024429.1:CDS |
TGATTAACCCTACCACGACT+CGG | 0.606063 | 4:+99369625 | None:intergenic |
GCAGGTGCCGAGTCGTGGTA+GGG | 0.610663 | 4:-99369632 | MsaT024429.1:CDS |
GAACTGAGGATAATCGTCGT+TGG | 0.611416 | 4:+99370437 | None:intergenic |
CACCGCCGCCATGATGTTAG+GGG | 0.612627 | 4:-99370550 | None:intergenic |
AAGACGGAACCAGTTGTCGC+CGG | 0.615571 | 4:-99370053 | MsaT024429.1:CDS |
CCACGACTCGGCACCTGCGT+AGG | 0.618584 | 4:+99369637 | None:intergenic |
AAGATTCGGCGATGCGCACG+TGG | 0.619291 | 4:-99370279 | MsaT024429.1:CDS |
GAATCCACCGATTCATGACT+CGG | 0.619620 | 4:+99370336 | None:intergenic |
TAGCTCTGTGAATGAAATGG+TGG | 0.623336 | 4:-99369794 | MsaT024429.1:CDS |
CCGAGAAAGTATAACTACTC+CGG | 0.623467 | 4:-99370192 | MsaT024429.1:CDS |
GGAAGAGCCTGTGATGGAGA+GGG | 0.627453 | 4:-99369575 | MsaT024429.1:CDS |
GATTCGTGTGAGTTTGCGCA+TGG | 0.630448 | 4:-99370126 | MsaT024429.1:CDS |
CCTACGCAGGTGCCGAGTCG+TGG | 0.632046 | 4:-99369637 | MsaT024429.1:CDS |
ATCGGAGTAATCGGAGACAT+CGG | 0.633731 | 4:+99369847 | None:intergenic |
GGCTGAGTACGGTAACGAGA+AGG | 0.636999 | 4:+99370081 | None:intergenic |
GCCAACAATGAACAATCCAA+CGG | 0.640124 | 4:-99370484 | MsaT024429.1:CDS |
GGAGTAATCGGAGACATCGG+AGG | 0.641390 | 4:+99369850 | None:intergenic |
TGGCAGGTCACATGACTGGA+CGG | 0.644811 | 4:-99370259 | MsaT024429.1:CDS |
CAACCGTACACGTTCCAGCA+TGG | 0.649929 | 4:-99370506 | MsaT024429.1:CDS |
CATGCTGGAACGTGTACGGT+TGG | 0.652730 | 4:+99370507 | None:intergenic |
TCAACGCAGTGCACACTCCG+GGG | 0.673364 | 4:+99369973 | None:intergenic |
GACATCGGAGGAGACTCCAC+CGG | 0.675579 | 4:+99369862 | None:intergenic |
CCTAGATTCGGGTCTCCCAG+AGG | 0.678542 | 4:-99369700 | MsaT024429.1:CDS |
GATCCAGGAGGAGACATGAA+CGG | 0.679198 | 4:+99369892 | None:intergenic |
GAATCTTAAACTCGAACATG+CGG | 0.686731 | 4:+99370295 | None:intergenic |
GCTTCTTGCATGTAGAACTG+AGG | 0.687997 | 4:+99370423 | None:intergenic |
AACAATGAACAATCCAACGG+CGG | 0.692559 | 4:-99370481 | MsaT024429.1:CDS |
ACCGGAGAAACCGATCCAGG+AGG | 0.697000 | 4:+99369880 | None:intergenic |
GTAGGCTACAGAATCCGGGT+CGG | 0.700260 | 4:+99369668 | None:intergenic |
AGAACCCACAGATCTTCCCA+AGG | 0.706781 | 4:+99369816 | None:intergenic |
ACGGTTGGATTTGTACGATG+AGG | 0.707900 | 4:+99370522 | None:intergenic |
CCTACCAACGACACCTACGC+AGG | 0.710974 | 4:-99369650 | MsaT024429.1:CDS |
TCTTTGGGATCAGTGTTGCG+AGG | 0.716443 | 4:-99369596 | MsaT024429.1:CDS |
TATACTTTCTCGGGTCACGG+CGG | 0.737764 | 4:+99370202 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 99369423 | 99370562 | 99369423 | ID=MsaG024429 |
Chr4 | mRNA | 99369423 | 99370562 | 99369423 | ID=MsaT024429.1;Parent=MsaG024429 |
Chr4 | exon | 99369423 | 99370562 | 99369423 | ID=MsaT024429.1.exon1;Parent=MsaT024429.1 |
Chr4 | CDS | 99369423 | 99370562 | 99369423 | ID=cds.MsaT024429.1;Parent=MsaT024429.1 |
Gene Sequence |
Protein sequence |