AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025065

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025065 MtrunA17_Chr5g0397231 98.119 319 3 2 1 317 1 318 0.0 646
MsaG025065 MtrunA17_Chr5g0397241 100.000 179 0 0 360 538 2 180 8.09e-129 373
MsaG025065 MtrunA17_Chr8g0387411 93.855 179 8 1 360 538 2 177 8.97e-119 347
MsaG025065 MtrunA17_Chr8g0387421 60.494 324 89 11 1 316 1 293 1.38e-110 332
MsaG025065 MtrunA17_Chr8g0342521 72.180 133 36 1 1 133 1 132 7.09e-64 212
MsaG025065 MtrunA17_Chr8g0342541 78.448 116 25 0 1 116 1 116 8.57e-64 212
MsaG025065 MtrunA17_Chr2g0330041 45.290 276 106 7 1 245 1 262 1.13e-61 208
MsaG025065 MtrunA17_Chr1g0193371 72.269 119 33 0 1 119 1 119 1.67e-60 204
MsaG025065 MtrunA17_Chr4g0058631 52.475 202 67 4 1 178 1 197 1.68e-60 203
MsaG025065 MtrunA17_Chr1g0193801 71.186 118 34 0 1 118 1 118 5.00e-60 203
MsaG025065 MtrunA17_Chr7g0270891 72.034 118 33 0 1 118 1 118 2.24e-59 201
MsaG025065 MtrunA17_Chr2g0309911 74.138 116 29 1 1 116 1 115 1.03e-58 197
MsaG025065 MtrunA17_Chr8g0342481 73.504 117 30 1 1 116 1 117 3.31e-58 199
MsaG025065 MtrunA17_Chr1g0211161 62.238 143 44 1 3 145 4 136 3.41e-57 191
MsaG025065 MtrunA17_Chr3g0117091 70.339 118 35 0 1 118 1 118 2.35e-56 192
MsaG025065 MtrunA17_Chr5g0410961 55.844 154 67 1 1 154 1 153 7.07e-55 188
MsaG025065 MtrunA17_Chr7g0271241 72.477 109 30 0 1 109 1 109 1.08e-54 189
MsaG025065 MtrunA17_Chr1g0203411 66.387 119 40 0 1 119 1 119 1.63e-52 180
MsaG025065 MtrunA17_Chr2g0323411 45.161 217 97 4 1 217 1 195 1.66e-52 181
MsaG025065 MtrunA17_Chr3g0088461 67.273 110 36 0 8 117 18 127 3.58e-52 181
MsaG025065 MtrunA17_Chr4g0032401 56.291 151 59 3 9 152 14 164 3.99e-52 181
MsaG025065 MtrunA17_Chr4g0039971 50.610 164 80 1 1 164 2 164 1.16e-50 177
MsaG025065 MtrunA17_Chr2g0328771 66.087 115 38 1 12 125 20 134 1.18e-50 176
MsaG025065 MtrunA17_Chr6g0452271 61.864 118 45 0 1 118 1 118 1.36e-50 176
MsaG025065 MtrunA17_Chr8g0385321 65.517 116 40 0 1 116 1 116 2.31e-50 175
MsaG025065 MtrunA17_Chr6g0453471 61.864 118 45 0 1 118 1 118 5.54e-50 176
MsaG025065 MtrunA17_Chr5g0435101 63.717 113 41 0 6 118 5 117 1.77e-49 169
MsaG025065 MtrunA17_Chr3g0115821 60.345 116 46 0 1 116 1 116 2.22e-49 174
MsaG025065 MtrunA17_Chr3g0131121 62.069 116 44 0 1 116 1 116 3.46e-49 171
MsaG025065 MtrunA17_Chr4g0048511 63.866 119 42 1 1 118 1 119 5.92e-49 172
MsaG025065 MtrunA17_Chr4g0037141 48.824 170 75 2 1 168 1 160 6.76e-49 170
MsaG025065 MtrunA17_Chr1g0203441 66.055 109 37 0 11 119 12 120 6.92e-49 170
MsaG025065 MtrunA17_Chr2g0281071 63.025 119 43 1 1 118 1 119 1.86e-48 171
MsaG025065 MtrunA17_Chr3g0110351 61.864 118 45 0 1 118 1 118 4.96e-48 169
MsaG025065 MtrunA17_Chr7g0274581 43.478 207 101 5 1 206 1 192 6.06e-48 165
MsaG025065 MtrunA17_Chr7g0217741 60.169 118 47 0 1 118 1 118 8.23e-48 168
MsaG025065 MtrunA17_Chr4g0070641 53.623 138 64 0 1 138 1 138 8.32e-48 164
MsaG025065 MtrunA17_Chr1g0151941 41.629 221 98 6 1 204 1 207 1.45e-47 166
MsaG025065 MtrunA17_Chr5g0434571 61.864 118 45 0 1 118 37 154 1.51e-47 169
MsaG025065 MtrunA17_Chr4g0057031 62.712 118 44 0 1 118 1 118 2.70e-47 166
MsaG025065 MtrunA17_Chr7g0217221 61.157 121 47 0 1 121 1 121 3.81e-47 165
MsaG025065 MtrunA17_Chr5g0395281 61.475 122 46 1 12 133 12 132 4.89e-47 166
MsaG025065 MtrunA17_Chr4g0042671 56.391 133 57 1 1 133 1 132 6.24e-47 169
MsaG025065 MtrunA17_Chr8g0349261 55.102 147 63 3 1 145 1 146 8.03e-47 165
MsaG025065 MtrunA17_Chr7g0228891 62.393 117 44 0 1 117 1 117 9.07e-47 164
MsaG025065 MtrunA17_Chr4g0070611 53.623 138 64 0 1 138 1 138 1.17e-46 165
MsaG025065 MtrunA17_Chr8g0342531 72.340 94 26 0 1 94 1 94 1.17e-46 160
MsaG025065 MtrunA17_Chr1g0187761 54.362 149 62 2 1 147 1 145 1.22e-46 163
MsaG025065 MtrunA17_Chr4g0068061 61.207 116 45 0 1 116 1 116 3.26e-46 165
MsaG025065 MtrunA17_Chr8g0342511 77.011 87 20 0 1 87 1 87 3.34e-46 157
MsaG025065 MtrunA17_Chr7g0275911 58.974 117 48 0 1 117 1 117 5.79e-46 162
MsaG025065 MtrunA17_Chr6g0470971 65.138 109 38 0 11 119 13 121 6.59e-46 162
MsaG025065 MtrunA17_Chr4g0028311 51.948 154 66 2 1 153 1 147 4.92e-45 161
MsaG025065 MtrunA17_Chr8g0346561 52.174 138 62 1 1 138 1 134 1.10e-44 159
MsaG025065 MtrunA17_Chr3g0103281 59.483 116 47 0 1 116 1 116 1.36e-44 160
MsaG025065 MtrunA17_Chr4g0060721 57.724 123 52 0 1 123 2 124 1.39e-44 160
MsaG025065 MtrunA17_Chr2g0323351 52.593 135 62 1 7 139 7 141 2.02e-44 157
MsaG025065 MtrunA17_Chr2g0311221 62.385 109 41 0 2 110 4 112 5.04e-44 159
MsaG025065 MtrunA17_Chr1g0167661 53.125 128 60 0 1 128 1 128 8.45e-44 155
MsaG025065 MtrunA17_Chr7g0254411 59.322 118 48 0 1 118 1 118 1.69e-43 157
MsaG025065 MtrunA17_Chr7g0261281 57.759 116 49 0 1 116 1 116 2.70e-43 155
MsaG025065 MtrunA17_Chr4g0044421 59.649 114 46 0 5 118 5 118 3.18e-43 152
MsaG025065 MtrunA17_Chr1g0194951 52.899 138 65 0 1 138 1 138 3.23e-43 157
MsaG025065 MtrunA17_Chr7g0228231 57.258 124 51 1 1 122 1 124 3.98e-43 152
MsaG025065 MtrunA17_Chr3g0135311 59.829 117 46 1 1 116 1 117 4.18e-43 157
MsaG025065 MtrunA17_Chr8g0342461 69.474 95 28 1 1 94 1 95 5.43e-43 150
MsaG025065 MtrunA17_Chr1g0167691 57.759 116 49 0 1 116 1 116 6.87e-43 153
MsaG025065 MtrunA17_Chr7g0264641 58.120 117 48 1 1 116 1 117 1.18e-42 153
MsaG025065 MtrunA17_Chr3g0092401 60.177 113 45 0 6 118 7 119 1.28e-42 154
MsaG025065 MtrunA17_Chr4g0022931 58.036 112 47 0 5 116 6 117 1.32e-42 153
MsaG025065 MtrunA17_Chr1g0152011 58.120 117 48 1 1 116 1 117 1.64e-42 155
MsaG025065 MtrunA17_Chr8g0342471 70.652 92 26 1 1 91 1 92 1.96e-42 148
MsaG025065 MtrunA17_Chr2g0327351 52.899 138 64 1 1 137 1 138 2.65e-42 154
MsaG025065 MtrunA17_Chr3g0121241 58.559 111 46 0 6 116 36 146 3.11e-42 153
MsaG025065 MtrunA17_Chr5g0400821 58.120 117 48 1 1 116 1 117 3.90e-42 153
MsaG025065 MtrunA17_Chr6g0453211 61.321 106 41 0 6 111 6 111 6.73e-42 152
MsaG025065 MtrunA17_Chr4g0022901 57.658 111 47 0 5 115 6 116 2.69e-41 149
MsaG025065 MtrunA17_Chr4g0022911 56.757 111 48 0 5 115 6 116 3.46e-41 150
MsaG025065 MtrunA17_Chr6g0450101 56.667 120 50 1 1 118 1 120 1.05e-40 146
MsaG025065 MtrunA17_Chr4g0054391 60.000 110 43 1 1 109 1 110 1.68e-40 148
MsaG025065 MtrunA17_Chr1g0209661 42.614 176 86 2 9 170 24 198 1.78e-40 149
MsaG025065 MtrunA17_Chr4g0072751 59.459 111 44 1 1 110 1 111 3.62e-40 149
MsaG025065 MtrunA17_Chr8g0343831 56.881 109 47 0 10 118 6 114 1.71e-39 144
MsaG025065 MtrunA17_Chr6g0487491 52.273 132 54 2 1 123 1 132 2.79e-39 144
MsaG025065 MtrunA17_Chr5g0417821 59.048 105 43 0 12 116 7 111 2.82e-39 144
MsaG025065 MtrunA17_Chr4g0055981 59.813 107 43 0 9 115 52 158 3.49e-39 142
MsaG025065 MtrunA17_Chr7g0269831 58.621 116 48 0 1 116 1 116 8.67e-39 145
MsaG025065 MtrunA17_Chr1g0194291 56.757 111 48 0 8 118 17 127 5.02e-38 140
MsaG025065 MtrunA17_Chr4g0022881 50.000 132 58 2 12 135 12 143 7.99e-38 139
MsaG025065 MtrunA17_Chr1g0168661 54.386 114 52 0 4 117 13 126 8.27e-38 140
MsaG025065 MtrunA17_Chr3g0099131 57.944 107 45 0 12 118 41 147 1.48e-37 145
MsaG025065 MtrunA17_Chr4g0022891 55.660 106 47 0 8 113 8 113 1.64e-37 138
MsaG025065 MtrunA17_Chr8g0354661 56.604 106 46 0 12 117 37 142 3.93e-37 144
MsaG025065 MtrunA17_Chr3g0080861 56.604 106 46 0 12 117 37 142 5.17e-37 143
MsaG025065 MtrunA17_Chr1g0186061 54.955 111 50 0 5 115 13 123 1.23e-36 136
MsaG025065 MtrunA17_Chr1g0194301 55.140 107 48 0 12 118 33 139 2.93e-36 136
MsaG025065 MtrunA17_Chr7g0247131 59.223 103 41 1 44 146 10 111 4.88e-35 132
MsaG025065 MtrunA17_Chr1g0154031 55.660 106 47 0 12 117 76 181 1.08e-34 135
MsaG025065 MtrunA17_Chr7g0240821 56.000 100 44 0 17 116 6 105 6.04e-34 128
MsaG025065 MtrunA17_Chr8g0360111 55.340 103 46 0 8 110 21 123 1.07e-33 128
MsaG025065 MtrunA17_Chr4g0068921 59.223 103 42 0 12 114 24 126 2.36e-33 125
MsaG025065 MtrunA17_Chr1g0180391 51.887 106 51 0 12 117 19 124 4.21e-33 126
MsaG025065 MtrunA17_Chr2g0327821 45.238 126 65 1 9 134 3 124 4.50e-33 126
MsaG025065 MtrunA17_Chr4g0042611 59.091 88 36 0 1 88 1 88 5.00e-33 121
MsaG025065 MtrunA17_Chr7g0220341 43.421 152 78 3 12 155 25 176 8.49e-33 126
MsaG025065 MtrunA17_Chr2g0322521 55.660 106 47 0 12 117 29 134 1.06e-32 129
MsaG025065 MtrunA17_Chr2g0293911 57.009 107 46 0 12 118 24 130 1.85e-32 127
MsaG025065 MtrunA17_Chr2g0294811 55.682 88 39 0 1 88 1 88 2.59e-32 120
MsaG025065 MtrunA17_Chr5g0434911 49.091 110 56 0 7 116 16 125 2.99e-32 125
MsaG025065 MtrunA17_Chr5g0434931 50.476 105 52 0 12 116 35 139 8.06e-32 124
MsaG025065 MtrunA17_Chr8g0334881 49.565 115 57 1 4 117 2 116 1.80e-31 124
MsaG025065 MtrunA17_Chr4g0030881 34.184 196 121 2 6 193 1 196 1.96e-31 122
MsaG025065 MtrunA17_Chr1g0192411 40.964 166 87 3 11 172 11 169 5.76e-31 124
MsaG025065 MtrunA17_Chr5g0434831 50.476 105 52 0 12 116 7 111 7.93e-31 118
MsaG025065 MtrunA17_Chr7g0228991 50.476 105 52 0 12 116 29 133 2.34e-30 119
MsaG025065 MtrunA17_Chr4g0013361 49.533 107 53 1 12 117 10 116 6.93e-30 119
MsaG025065 MtrunA17_Chr2g0323321 54.651 86 39 0 7 92 6 91 1.01e-29 112
MsaG025065 MtrunA17_Chr5g0440781 49.074 108 53 2 12 118 12 118 1.65e-29 114
MsaG025065 MtrunA17_Chr5g0395221 62.338 77 29 0 12 88 12 88 3.27e-29 110
MsaG025065 MtrunA17_Chr5g0434841 48.571 105 54 0 12 116 20 124 3.98e-29 117
MsaG025065 MtrunA17_Chr5g0440761 49.074 108 53 2 12 118 12 118 6.33e-29 115
MsaG025065 MtrunA17_Chr5g0441141 49.074 108 53 2 12 118 12 118 6.41e-29 115
MsaG025065 MtrunA17_Chr5g0441131 40.132 152 84 3 12 162 9 154 1.63e-27 109
MsaG025065 MtrunA17_Chr3g0099141 50.575 87 43 0 8 94 36 122 3.29e-27 107
MsaG025065 MtrunA17_Chr5g0401731 48.696 115 56 2 3 115 2 115 6.53e-27 111
MsaG025065 MtrunA17_Chr5g0429661 39.744 156 83 4 14 169 122 266 8.28e-27 111
MsaG025065 MtrunA17_Chr6g0454921 51.961 102 48 1 14 115 15 115 1.59e-26 107
MsaG025065 MtrunA17_Chr4g0008551 49.020 102 51 1 14 115 38 138 1.94e-26 110
MsaG025065 MtrunA17_Chr4g0053431 50.980 102 49 1 14 115 5 105 2.62e-26 108
MsaG025065 MtrunA17_Chr6g0480581 48.571 105 53 1 14 118 4 107 6.17e-25 103
MsaG025065 MtrunA17_Chr6g0460661 43.363 113 61 2 11 122 13 123 8.53e-25 100
MsaG025065 MtrunA17_Chr4g0042501 43.802 121 62 2 2 122 98 212 1.75e-24 105
MsaG025065 MtrunA17_Chr3g0133601 48.182 110 54 2 8 115 29 137 1.80e-24 102
MsaG025065 MtrunA17_Chr5g0417621 45.536 112 60 1 11 122 131 241 1.84e-24 106
MsaG025065 MtrunA17_Chr5g0437321 44.628 121 65 2 8 128 14 132 4.03e-24 102
MsaG025065 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 1.31e-23 104
MsaG025065 MtrunA17_Chr4g0058991 42.857 112 63 1 12 123 207 317 1.64e-23 103
MsaG025065 MtrunA17_Chr3g0117511 41.818 110 63 1 14 123 183 291 3.27e-23 102
MsaG025065 MtrunA17_Chr3g0139671 46.602 103 54 1 14 116 85 186 1.03e-22 102
MsaG025065 MtrunA17_Chr3g0125801 49.074 108 52 2 14 120 16 121 2.26e-22 97.4
MsaG025065 MtrunA17_Chr7g0229101 57.143 70 30 0 44 113 4 73 2.82e-22 95.1
MsaG025065 MtrunA17_Chr1g0177901 37.313 134 83 1 25 158 5 137 2.98e-22 95.1
MsaG025065 MtrunA17_Chr7g0229131 53.425 73 34 0 44 116 4 76 3.38e-22 94.0
MsaG025065 MtrunA17_Chr5g0434901 58.462 65 27 0 46 110 7 71 4.60e-22 91.7
MsaG025065 MtrunA17_Chr1g0157731 45.631 103 55 1 14 116 91 192 8.19e-22 99.8
MsaG025065 MtrunA17_Chr6g0460671 43.119 109 61 1 14 122 99 206 2.99e-21 95.5
MsaG025065 MtrunA17_Chr5g0425591 48.193 83 42 1 12 93 9 91 3.16e-21 88.6
MsaG025065 MtrunA17_Chr7g0228531 43.478 115 58 3 12 121 218 330 4.70e-21 95.9
MsaG025065 MtrunA17_Chr6g0453751 46.154 91 40 2 12 93 20 110 1.92e-20 87.4
MsaG025065 MtrunA17_Chr3g0093811 50.667 75 37 0 44 118 14 88 2.70e-20 90.9
MsaG025065 MtrunA17_Chr7g0228401 45.545 101 51 2 25 125 290 386 6.36e-20 92.8
MsaG025065 MtrunA17_Chr5g0397841 45.098 102 54 2 8 109 105 204 1.03e-19 92.0
MsaG025065 MtrunA17_Chr7g0254261 40.678 118 64 2 1 118 81 192 1.20e-18 87.8
MsaG025065 MtrunA17_Chr7g0238651 34.848 132 84 1 14 143 7 138 1.94e-18 87.0
MsaG025065 MtrunA17_Chr7g0228481 40.000 115 62 3 12 121 218 330 3.14e-18 87.4
MsaG025065 MtrunA17_Chr7g0233061 40.351 114 56 5 14 121 180 287 1.20e-16 81.6
MsaG025065 MtrunA17_Chr5g0416341 34.862 109 70 1 17 125 29 136 6.19e-16 80.5
MsaG025065 MtrunA17_Chr1g0193901 55.000 60 26 1 10 68 9 68 1.14e-15 73.2
MsaG025065 MtrunA17_Chr1g0193891 55.000 60 26 1 10 68 9 68 1.14e-15 73.2
MsaG025065 MtrunA17_Chr1g0193871 55.000 60 26 1 10 68 9 68 1.14e-15 73.2
MsaG025065 MtrunA17_Chr1g0193881 55.000 60 26 1 10 68 9 68 1.14e-15 73.2
MsaG025065 MtrunA17_Chr8g0362231 35.398 113 70 2 17 127 25 136 1.17e-14 76.3
MsaG025065 MtrunA17_Chr3g0104491 34.211 76 46 1 53 124 1 76 5.03e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025065 AT1G63910.1 50.418 359 124 11 1 316 1 348 2.14e-94 292
MsaG025065 AT4G25740.1 81.818 154 23 1 360 513 2 150 1.25e-74 234
MsaG025065 AT5G52650.1 81.290 155 28 1 359 513 1 154 2.72e-67 215
MsaG025065 AT5G41520.1 81.046 153 24 5 360 511 2 150 3.93e-65 210
MsaG025065 AT3G13890.2 77.586 116 26 0 1 116 1 116 6.12e-64 213
MsaG025065 AT3G13890.1 72.000 125 26 1 1 116 1 125 8.39e-61 205
MsaG025065 AT4G01680.3 73.504 117 31 0 1 117 1 117 9.69e-61 201
MsaG025065 AT5G26660.1 59.627 161 55 3 1 160 1 152 1.19e-60 204
MsaG025065 AT1G09540.1 73.729 118 31 0 1 118 1 118 1.42e-60 204
MsaG025065 AT4G01680.1 73.504 117 31 0 1 117 1 117 4.92e-60 202
MsaG025065 AT1G57560.1 71.186 118 34 0 1 118 1 118 6.15e-59 198
MsaG025065 AT1G57560.2 71.186 118 34 0 1 118 1 118 9.52e-59 196
MsaG025065 AT3G12720.1 74.138 116 29 1 1 116 12 126 2.77e-58 196
MsaG025065 AT4G01680.2 66.667 129 31 1 1 117 1 129 1.34e-56 193
MsaG025065 AT4G25740.2 63.068 176 32 1 360 535 2 144 1.63e-53 178
MsaG025065 AT5G12870.1 66.372 113 38 0 10 122 16 128 6.90e-52 179
MsaG025065 AT3G01140.2 54.248 153 62 2 1 153 1 145 9.91e-52 180
MsaG025065 AT3G08500.1 63.559 118 40 1 3 117 18 135 1.11e-50 177
MsaG025065 AT3G02940.2 63.793 116 42 0 1 116 1 116 1.20e-50 176
MsaG025065 AT5G15310.4 62.712 118 44 0 1 118 1 118 2.57e-50 173
MsaG025065 AT5G15310.1 62.712 118 44 0 1 118 1 118 2.70e-50 176
MsaG025065 AT3G02940.1 63.793 116 42 0 1 116 1 116 2.74e-50 176
MsaG025065 AT3G02940.3 63.793 116 42 0 1 116 1 116 2.74e-50 176
MsaG025065 AT4G05100.1 63.866 119 42 1 1 118 1 119 3.00e-50 176
MsaG025065 AT5G15310.2 62.712 118 44 0 1 118 1 118 3.58e-50 175
MsaG025065 AT5G16770.4 52.121 165 73 3 1 160 1 164 4.96e-50 175
MsaG025065 AT5G16770.3 52.121 165 73 3 1 160 1 164 4.96e-50 175
MsaG025065 AT3G01140.1 65.487 113 39 0 6 118 49 161 6.52e-50 176
MsaG025065 AT5G16770.1 52.121 165 73 3 1 160 1 164 1.17e-49 174
MsaG025065 AT5G16770.2 52.121 165 73 3 1 160 1 164 1.17e-49 174
MsaG025065 AT5G60890.1 61.017 118 46 0 1 118 1 118 1.21e-49 173
MsaG025065 AT4G34990.1 62.931 116 43 0 1 116 1 116 2.41e-49 172
MsaG025065 AT2G16720.1 61.207 116 45 0 1 116 1 116 4.47e-49 171
MsaG025065 AT4G28110.1 62.185 119 45 0 1 119 1 119 6.16e-49 171
MsaG025065 AT2G31180.1 40.741 216 116 2 1 204 1 216 1.09e-48 169
MsaG025065 AT4G38620.1 61.207 116 45 0 1 116 1 116 1.21e-48 170
MsaG025065 AT4G21440.1 54.483 145 59 2 1 145 1 138 1.31e-48 172
MsaG025065 AT4G12350.1 43.000 200 91 2 1 200 1 177 1.96e-48 169
MsaG025065 AT5G65230.1 62.069 116 44 0 1 116 1 116 2.94e-48 170
MsaG025065 AT4G17785.2 63.248 117 42 1 1 116 1 117 4.42e-48 171
MsaG025065 AT1G34670.1 60.345 116 46 0 1 116 1 116 5.82e-48 171
MsaG025065 AT4G09460.1 59.483 116 47 0 1 116 1 116 5.96e-48 167
MsaG025065 AT4G17785.1 63.248 117 42 1 1 116 1 117 6.15e-48 171
MsaG025065 AT1G66230.1 61.864 118 45 0 1 118 1 118 7.91e-48 168
MsaG025065 AT1G22640.1 61.207 116 45 0 1 116 1 116 8.59e-48 167
MsaG025065 AT3G61250.1 61.207 116 45 0 1 116 1 116 1.32e-47 168
MsaG025065 AT1G06180.1 45.178 197 98 2 1 189 1 195 1.41e-47 166
MsaG025065 AT5G10280.1 58.621 116 48 0 1 116 1 116 1.49e-47 169
MsaG025065 AT5G16600.1 61.017 118 46 0 1 118 1 118 3.43e-47 167
MsaG025065 AT3G23250.1 55.906 127 56 0 1 127 1 127 3.44e-47 166
MsaG025065 AT5G54230.1 63.559 118 43 0 1 118 1 118 4.98e-47 167
MsaG025065 AT4G22680.1 60.169 118 47 0 1 118 1 118 1.30e-46 164
MsaG025065 AT1G79180.1 57.812 128 54 0 2 129 4 131 2.46e-46 164
MsaG025065 AT5G49330.1 62.069 116 44 0 1 116 1 116 2.75e-46 166
MsaG025065 AT1G18570.1 62.185 119 44 1 1 118 1 119 4.01e-46 165
MsaG025065 AT5G61420.2 59.483 116 47 0 1 116 1 116 6.59e-46 165
MsaG025065 AT5G07690.1 61.404 114 44 0 1 114 1 114 9.43e-46 164
MsaG025065 AT2G47460.1 59.524 126 47 1 1 122 1 126 1.37e-45 164
MsaG025065 AT1G35515.1 58.621 116 48 0 1 116 1 116 2.18e-45 159
MsaG025065 AT1G08810.1 49.080 163 71 2 1 159 1 155 2.78e-45 161
MsaG025065 AT5G56110.1 59.483 116 47 0 1 116 1 116 2.96e-45 162
MsaG025065 AT3G47600.1 59.016 122 50 0 1 122 1 122 5.56e-45 162
MsaG025065 AT5G07700.1 59.483 116 47 0 1 116 1 116 8.81e-45 161
MsaG025065 AT5G07700.2 59.483 116 47 0 1 116 1 116 8.81e-45 161
MsaG025065 AT3G62610.1 59.483 116 47 0 1 116 1 116 2.28e-44 160
MsaG025065 AT5G23000.1 60.684 117 45 1 1 116 1 117 3.00e-44 159
MsaG025065 AT3G27810.1 43.646 181 94 2 9 185 17 193 5.08e-44 155
MsaG025065 AT5G62470.2 59.016 122 50 0 1 122 1 122 5.26e-44 159
MsaG025065 AT2G36890.1 55.882 136 51 2 1 135 1 128 5.74e-44 158
MsaG025065 AT1G74650.1 61.207 116 45 0 1 116 1 116 7.28e-44 159
MsaG025065 AT5G14340.1 59.829 117 47 0 1 117 13 129 7.29e-44 157
MsaG025065 AT1G56160.1 60.000 115 46 0 2 116 4 118 8.05e-44 157
MsaG025065 AT1G16490.1 57.480 127 50 1 2 128 4 126 8.37e-44 157
MsaG025065 AT2G36890.2 55.882 136 51 2 1 135 42 169 9.14e-44 159
MsaG025065 AT1G74430.1 56.780 118 51 0 1 118 1 118 1.05e-43 156
MsaG025065 AT1G74080.1 51.799 139 61 1 6 138 6 144 3.98e-43 157
MsaG025065 AT3G28470.1 57.273 110 47 0 1 110 1 110 6.43e-43 155
MsaG025065 AT3G28910.1 59.322 118 48 0 6 123 6 123 1.24e-42 155
MsaG025065 AT3G48920.1 53.600 125 57 1 8 131 14 138 1.26e-42 153
MsaG025065 AT3G49690.1 58.974 117 47 1 1 116 1 117 1.92e-42 154
MsaG025065 AT5G57620.1 58.120 117 48 1 1 116 1 117 2.04e-42 155
MsaG025065 AT4G25560.1 60.714 112 44 0 10 121 8 119 2.72e-42 153
MsaG025065 AT5G62470.1 59.016 122 49 1 1 122 1 121 2.95e-42 155
MsaG025065 AT5G35550.1 46.012 163 84 1 9 171 11 169 3.36e-42 152
MsaG025065 AT1G18710.1 50.000 146 63 1 1 146 1 136 3.78e-42 152
MsaG025065 AT5G52260.1 52.778 144 49 2 9 133 9 152 4.53e-42 152
MsaG025065 AT5G40350.1 55.556 126 54 1 11 134 16 141 5.87e-42 150
MsaG025065 AT3G13540.1 57.658 111 47 0 6 116 17 127 1.08e-41 150
MsaG025065 AT5G65790.1 57.265 117 49 1 1 116 1 117 3.51e-41 152
MsaG025065 AT3G01530.1 54.400 125 50 1 12 136 25 142 4.76e-41 147
MsaG025065 AT5G40330.1 56.481 108 47 0 9 116 9 116 4.88e-41 147
MsaG025065 AT3G12820.1 59.292 113 46 0 6 118 8 120 6.40e-41 148
MsaG025065 AT5G14750.1 57.692 104 44 0 13 116 17 120 6.86e-41 147
MsaG025065 AT5G62320.1 54.098 122 49 1 2 116 3 124 6.88e-41 148
MsaG025065 AT4G37780.1 56.410 117 50 1 1 116 1 117 8.48e-41 149
MsaG025065 AT5G52600.1 56.637 113 49 0 12 124 12 124 1.46e-40 145
MsaG025065 AT3G27920.1 54.386 114 52 0 10 123 12 125 2.64e-40 146
MsaG025065 AT1G79180.2 45.963 161 54 1 2 129 4 164 7.08e-40 147
MsaG025065 AT5G41520.2 83.333 108 14 4 404 511 1 104 8.59e-40 141
MsaG025065 AT1G48000.1 49.315 146 71 2 11 154 31 175 1.99e-39 144
MsaG025065 AT4G13480.1 51.220 123 60 0 13 135 7 129 1.06e-38 142
MsaG025065 AT3G30210.1 39.720 214 109 5 13 216 28 231 3.09e-38 142
MsaG025065 AT4G26930.1 57.944 107 45 0 12 118 19 125 4.34e-38 144
MsaG025065 AT2G32460.1 57.547 106 45 0 12 117 18 123 4.59e-38 146
MsaG025065 AT2G32460.2 57.547 106 45 0 12 117 6 111 4.92e-38 146
MsaG025065 AT5G06100.1 58.491 106 44 0 12 117 32 137 6.24e-38 145
MsaG025065 AT5G06100.5 58.491 106 44 0 12 117 32 137 2.28e-37 145
MsaG025065 AT5G06100.2 58.491 106 44 0 12 117 32 137 2.28e-37 145
MsaG025065 AT5G06100.3 58.491 106 44 0 12 117 32 137 2.28e-37 145
MsaG025065 AT5G06100.4 58.491 106 44 0 12 117 32 137 2.28e-37 145
MsaG025065 AT1G68320.1 56.881 109 47 0 10 118 17 125 2.55e-37 139
MsaG025065 AT3G24310.1 56.757 111 48 0 13 123 19 129 2.89e-37 139
MsaG025065 AT5G55020.1 55.140 107 48 0 12 118 26 132 1.74e-36 142
MsaG025065 AT3G11440.2 55.660 106 47 0 12 117 41 146 1.83e-36 141
MsaG025065 AT2G47190.1 46.923 130 68 1 12 140 20 149 2.25e-36 136
MsaG025065 AT2G26960.1 41.722 151 74 1 9 145 17 167 6.12e-36 139
MsaG025065 AT3G11440.3 55.660 106 47 0 12 117 41 146 7.28e-36 141
MsaG025065 AT3G11440.4 55.660 106 47 0 12 117 41 146 7.28e-36 141
MsaG025065 AT3G11440.1 55.660 106 47 0 12 117 41 146 7.28e-36 141
MsaG025065 AT1G25340.1 45.455 143 73 2 13 154 19 157 2.69e-35 134
MsaG025065 AT5G26660.2 52.846 123 48 3 39 160 8 121 8.81e-35 134
MsaG025065 AT3G06490.1 54.237 118 54 0 1 118 8 125 8.24e-34 131
MsaG025065 AT1G66370.1 45.802 131 61 1 12 132 8 138 1.80e-32 125
MsaG025065 AT3G27810.2 44.138 145 73 2 45 185 4 144 1.88e-32 123
MsaG025065 AT5G59780.3 49.091 110 56 0 9 118 5 114 3.04e-32 124
MsaG025065 AT5G49620.1 56.364 110 48 0 9 118 23 132 4.35e-32 125
MsaG025065 AT3G53200.1 50.467 107 53 0 9 115 6 112 2.78e-31 121
MsaG025065 AT3G46130.1 50.485 103 51 0 13 115 10 112 7.13e-31 121
MsaG025065 AT1G25340.2 43.357 143 71 3 13 154 19 152 1.05e-30 121
MsaG025065 AT5G40350.2 59.783 92 35 1 45 134 5 96 1.65e-30 117
MsaG025065 AT1G25340.3 43.357 143 71 3 13 154 19 152 1.84e-30 121
MsaG025065 AT3G60460.1 47.321 112 58 1 7 117 6 117 2.16e-30 120
MsaG025065 AT3G47600.2 55.556 99 40 1 24 122 22 116 7.60e-30 120
MsaG025065 AT1G66380.1 52.885 104 49 0 12 115 8 111 8.46e-30 114
MsaG025065 AT5G35550.2 45.669 127 65 1 45 171 50 172 4.24e-29 116
MsaG025065 AT1G66390.1 52.885 104 49 0 12 115 8 111 6.94e-29 115
MsaG025065 AT1G56650.1 51.923 104 50 0 12 115 8 111 7.78e-29 115
MsaG025065 AT2G26950.1 46.078 102 55 0 9 110 13 114 1.12e-28 117
MsaG025065 AT5G49620.2 50.000 124 48 1 9 118 23 146 1.13e-28 116
MsaG025065 AT5G14750.3 63.768 69 25 0 48 116 18 86 1.77e-27 108
MsaG025065 AT3G12820.2 67.606 71 23 0 48 118 2 72 5.26e-27 108
MsaG025065 AT5G59780.2 59.211 76 31 0 43 118 18 93 1.84e-26 107
MsaG025065 AT3G46130.3 60.000 75 30 0 44 118 9 83 2.22e-26 107
MsaG025065 AT3G46130.4 61.644 73 28 0 43 115 18 90 4.32e-26 107
MsaG025065 AT1G69560.1 47.154 123 60 3 3 122 94 214 5.80e-26 108
MsaG025065 AT1G69560.2 47.154 123 60 3 3 122 110 230 7.56e-26 108
MsaG025065 AT3G27785.1 42.241 116 66 1 12 127 187 301 5.31e-25 108
MsaG025065 AT5G58850.1 45.714 105 56 1 14 118 105 208 6.47e-25 107
MsaG025065 AT5G11050.1 36.943 157 92 3 10 160 101 256 8.90e-25 107
MsaG025065 AT5G40360.1 32.086 187 117 5 12 195 156 335 2.60e-24 104
MsaG025065 AT1G26780.1 48.182 110 54 2 14 122 98 205 3.45e-24 102
MsaG025065 AT3G53200.2 58.904 73 30 0 43 115 7 79 4.14e-24 100
MsaG025065 AT1G26780.2 48.182 110 54 2 14 122 98 205 4.69e-24 103
MsaG025065 AT4G37260.1 49.074 108 53 2 8 115 8 113 5.30e-24 103
MsaG025065 AT3G50060.1 48.039 102 52 1 14 115 6 106 7.26e-24 102
MsaG025065 AT1G17950.1 45.045 111 60 1 14 124 5 114 9.23e-24 100
MsaG025065 AT5G02320.1 48.544 103 52 1 14 116 127 228 2.38e-23 104
MsaG025065 AT5G02320.2 48.544 103 52 1 14 116 127 228 2.38e-23 104
MsaG025065 AT5G67300.1 49.020 102 51 1 14 115 6 106 2.55e-23 100
MsaG025065 AT2G39880.1 41.667 132 75 2 9 140 46 175 2.55e-23 102
MsaG025065 AT5G02320.3 48.544 103 52 1 14 116 67 168 2.70e-23 103
MsaG025065 AT4G18770.1 41.818 110 63 1 14 123 217 325 3.05e-23 102
MsaG025065 AT2G23290.1 50.980 102 49 1 14 115 13 113 3.33e-23 100
MsaG025065 AT3G55730.1 49.533 107 52 2 9 115 52 156 1.11e-22 100
MsaG025065 AT3G09370.2 48.039 102 52 1 14 115 135 235 1.12e-22 102
MsaG025065 AT3G09370.1 48.039 102 52 1 14 115 130 230 1.13e-22 101
MsaG025065 AT3G09370.3 48.039 102 52 1 14 115 143 243 1.43e-22 101
MsaG025065 AT3G29020.1 42.202 109 62 1 14 122 65 172 2.12e-22 96.7
MsaG025065 AT3G29020.2 42.202 109 62 1 14 122 67 174 2.63e-22 97.8
MsaG025065 AT3G09230.1 47.059 102 53 1 14 115 55 155 3.15e-22 99.4
MsaG025065 AT4G33450.1 38.686 137 80 2 13 149 18 150 3.21e-22 96.7
MsaG025065 AT5G11510.3 43.750 112 62 1 11 122 78 188 2.18e-21 99.0
MsaG025065 AT5G11510.1 43.750 112 62 1 11 122 78 188 2.18e-21 99.0
MsaG025065 AT5G11510.4 43.750 112 62 1 11 122 78 188 2.18e-21 99.0
MsaG025065 AT1G73410.1 45.794 107 57 1 14 120 6 111 2.61e-21 93.6
MsaG025065 AT5G11510.5 43.750 112 62 1 11 122 78 188 2.62e-21 98.6
MsaG025065 AT5G11510.2 43.750 112 62 1 11 122 78 188 2.65e-21 98.6
MsaG025065 AT1G22640.3 66.102 59 20 0 58 116 1 59 3.10e-21 92.4
MsaG025065 AT3G23250.2 57.143 70 30 0 58 127 1 70 3.75e-21 92.8
MsaG025065 AT1G66380.3 58.333 72 30 0 44 115 7 78 4.26e-21 89.0
MsaG025065 AT5G17800.1 41.176 119 69 1 1 119 80 197 4.79e-21 94.7
MsaG025065 AT1G73410.2 45.794 107 57 1 14 120 6 111 5.34e-21 91.7
MsaG025065 AT4G32730.5 44.660 103 56 1 14 116 87 188 6.36e-21 97.4
MsaG025065 AT4G32730.4 44.660 103 56 1 14 116 87 188 6.36e-21 97.4
MsaG025065 AT4G32730.3 44.660 103 56 1 14 116 87 188 6.36e-21 97.4
MsaG025065 AT4G32730.2 44.660 103 56 1 14 116 87 188 6.36e-21 97.4
MsaG025065 AT4G32730.1 44.660 103 56 1 14 116 87 188 7.62e-21 97.1
MsaG025065 AT1G18960.1 41.228 114 57 5 5 116 4 109 2.32e-20 92.4
MsaG025065 AT5G14750.4 57.627 59 25 0 58 116 1 59 3.75e-19 84.7
MsaG025065 AT5G14750.2 57.627 59 25 0 58 116 1 59 3.75e-19 84.7
MsaG025065 AT2G25230.1 41.489 94 54 1 17 110 29 121 6.61e-19 86.7
MsaG025065 AT1G66380.2 43.299 97 54 1 12 107 8 104 1.67e-18 81.6
MsaG025065 AT1G71030.2 48.529 68 35 0 51 118 5 72 2.62e-18 83.2
MsaG025065 AT1G71030.1 48.529 68 35 0 51 118 19 86 3.37e-18 83.6
MsaG025065 AT2G02820.3 36.697 109 68 1 17 125 33 140 7.90e-18 85.1
MsaG025065 AT5G39700.1 38.596 114 69 1 9 122 51 163 1.05e-17 82.0
MsaG025065 AT2G02820.1 36.697 109 68 1 17 125 33 140 1.11e-17 86.3
MsaG025065 AT2G02820.2 36.697 109 68 1 17 125 33 140 1.62e-17 85.9
MsaG025065 AT2G37630.1 36.154 130 79 2 13 140 3 130 3.74e-17 83.6
MsaG025065 AT1G14350.2 40.594 101 59 1 17 117 28 127 5.50e-17 84.0
MsaG025065 AT1G14350.1 40.594 101 59 1 17 117 28 127 5.50e-17 84.0
MsaG025065 AT4G00540.2 40.741 108 60 2 12 116 101 207 1.02e-16 82.8
MsaG025065 AT4G00540.1 40.741 108 60 2 12 116 99 205 1.64e-16 82.4
MsaG025065 AT5G40430.1 32.456 114 74 3 12 125 52 162 5.00e-15 75.5
MsaG025065 AT5G59780.1 57.143 49 21 0 70 118 1 49 6.04e-13 67.4
MsaG025065 AT3G46130.2 57.143 49 21 0 70 118 1 49 1.24e-12 67.4
MsaG025065 AT4G25560.2 57.692 52 22 0 70 121 2 53 1.64e-12 67.4
MsaG025065 AT3G28910.2 57.447 47 20 0 77 123 1 47 3.23e-11 64.3
MsaG025065 AT1G74650.3 65.000 40 14 0 77 116 1 40 6.46e-11 63.5

Find 134 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATGGATAAATTATTTA+AGG 0.191741 5:+3612723 MsaT025065.1:CDS
GTAATTATCTAGTTGATTAA+TGG 0.205543 5:-3613484 None:intergenic
AGAGGACCTGCTGGTGAATT+TGG 0.215916 5:+3628209 MsaT025065.1:CDS
AGATTTGGCACATCGATTTC+TGG 0.226768 5:-3627821 None:intergenic
AGCTTAATCACTTGCAGATT+TGG 0.235590 5:-3627836 None:intergenic
TGCAAAGAAGGATTTCAATT+TGG 0.241273 5:+3627790 MsaT025065.1:CDS
AGGACATGTTGATGAAAATA+AGG 0.261958 5:-3613541 None:intergenic
TTGCTTGGATGAACTATTAC+TGG 0.272334 5:+3627900 MsaT025065.1:CDS
ATAGTTGGTGTTGATAAATT+AGG 0.292324 5:-3613423 None:intergenic
GCTGACTACAGGCCTTCTTT+TGG 0.293788 5:+3628254 MsaT025065.1:CDS
CCTGGCTTCGGTCGTGGTTC+TGG 0.294525 5:+3629727 MsaT025065.1:CDS
TTTGATGGAGAAAGGAGATT+TGG 0.304890 5:+3628155 MsaT025065.1:CDS
GGTCGTGGTTCTGGTGGCTT+TGG 0.306704 5:+3629736 MsaT025065.1:CDS
CTACTCATGGTTATGGTTGC+TGG 0.308659 5:+3612540 MsaT025065.1:CDS
ATGAGTTTCTCATCTTCTTC+AGG 0.319747 5:-3612506 None:intergenic
CTCCTTTCTCCATCAAATCT+TGG 0.337377 5:-3628149 None:intergenic
TCAAGTGCAATCTTGTAATA+TGG 0.345859 5:+3613833 MsaT025065.1:CDS
AAAAGATGTATTCGATCATT+TGG 0.349983 5:+3614351 MsaT025065.1:CDS
AAGCCAGCTGGAAGGCCCTT+TGG 0.353720 5:+3628010 MsaT025065.1:CDS
AACCTTCCTCTTCTAATATC+AGG 0.359507 5:-3612746 None:intergenic
TCATGATGGAATAGTACTTC+TGG 0.366082 5:-3613627 None:intergenic
TGATGCAGAGCTTCAAATCT+AGG 0.370024 5:+3627858 MsaT025065.1:CDS
TACATTACTACTCATGGTTA+TGG 0.370666 5:+3612533 MsaT025065.1:CDS
TACTGGTTCCTTACCAATGA+TGG 0.373159 5:+3627917 MsaT025065.1:CDS
AGGCCCTTTGGTGGTCCTCC+TGG 0.384336 5:+3628022 MsaT025065.1:CDS
TTCATGGGGTTGTTGGCAAC+AGG 0.386838 5:+3612801 MsaT025065.1:CDS
AAGTTAATTATAAGCCTTCA+TGG 0.404335 5:+3612785 MsaT025065.1:CDS
GATTTGGCACATCGATTTCT+GGG 0.410537 5:-3627820 None:intergenic
TCCACATTATTCTCTATCAA+TGG 0.410595 5:-3613789 None:intergenic
CAGGGTCCTGGTGGTAGACC+TGG 0.422429 5:+3629709 MsaT025065.1:intron
GGAGAGTGTTGAAGGACAAA+TGG 0.424251 5:+3613962 MsaT025065.1:CDS
TAAGCATCGTTTGAACTAGT+TGG 0.424537 5:-3629763 None:intergenic
GAGAAACTCAATTCCATCAT+TGG 0.425707 5:-3627930 None:intergenic
ATAATTAACTTCTCCTCCTC+AGG 0.429297 5:-3612773 None:intergenic
CCACCAAAGGGCCTTCCAGC+TGG 0.433378 5:-3628013 None:intergenic
ATAAGCCTTCATGGGGTTGT+TGG 0.433560 5:+3612794 MsaT025065.1:CDS
AGGAGGAGAGTTATTAACAT+TGG 0.435772 5:+3613863 MsaT025065.1:CDS
ATGATGGAATTGAGTTTCTC+AGG 0.441503 5:+3627933 MsaT025065.1:CDS
AATTCACCAGCAGGTCCTCT+TGG 0.445100 5:-3628206 None:intergenic
TCCTGCTACTTTGAAGAAGC+AGG 0.450643 5:+3627985 MsaT025065.1:CDS
CTGACTCTATTGCAGGGTCC+TGG 0.452836 5:+3629697 MsaT025065.1:intron
GCCTGCTTCTTCAAAGTAGC+AGG 0.453311 5:-3627986 None:intergenic
TTCAGCTGGGAGAGTGTTGA+AGG 0.456330 5:+3613954 MsaT025065.1:CDS
ATTCACCAGCAGGTCCTCTT+GGG 0.458492 5:-3628205 None:intergenic
AGGGGCCCACCAAGATTTGA+TGG 0.462295 5:+3628140 MsaT025065.1:intron
AAGAGACACAAATGTTGAAA+AGG 0.464207 5:-3614426 None:intergenic
GACAAGAAGAGTTGAATGAA+TGG 0.469944 5:+3613898 MsaT025065.1:CDS
GGGAGTTTGCTATGCAAAGA+AGG 0.473090 5:+3627778 MsaT025065.1:CDS
CTTTCTCCATCAAATCTTGG+TGG 0.474542 5:-3628146 None:intergenic
AAGAAGCAGGCTAAGCCAGC+TGG 0.479610 5:+3627998 MsaT025065.1:CDS
CTTGTGTCAAACATAAATAA+AGG 0.479629 5:-3613561 None:intergenic
AAGTGCAGACCAGCTTTCTC+AGG 0.484684 5:-3612572 None:intergenic
GGTAGACCTGGCTTCGGTCG+TGG 0.484946 5:+3629721 MsaT025065.1:CDS
GATGGAGAAAGGAGATTTGG+TGG 0.486392 5:+3628158 MsaT025065.1:CDS
GGCTTCGGTCGTGGTTCTGG+TGG 0.490892 5:+3629730 MsaT025065.1:CDS
CAGGTCCTCTTGGGCCTCCA+CGG 0.492606 5:-3628196 None:intergenic
CACATTGCAAGCCACTTGCC+TGG 0.495527 5:+3613324 MsaT025065.1:CDS
CACCAAGATTTGATGGAGAA+AGG 0.498036 5:+3628147 MsaT025065.1:CDS
TTTCTCCATCAAATCTTGGT+GGG 0.498924 5:-3628145 None:intergenic
TCTGTTGATTGCAGCATGAA+TGG 0.499140 5:-3612460 None:intergenic
AGTTAATTATAAGCCTTCAT+GGG 0.499739 5:+3612786 MsaT025065.1:CDS
ATCACCAGGAGGACCACCAA+AGG 0.501155 5:-3628026 None:intergenic
CCAGCTGGAAGGCCCTTTGG+TGG 0.502902 5:+3628013 MsaT025065.1:CDS
TACTTCTGGTCTTATTACAT+TGG 0.506573 5:-3613613 None:intergenic
GTGGAGCTCCAGCTGACTAC+AGG 0.506847 5:+3628243 MsaT025065.1:CDS
ATTTCATTGTCTGTTCTACC+AGG 0.510091 5:-3613342 None:intergenic
AAAGCTATTGCAGCTGGATG+AGG 0.510638 5:-3613729 None:intergenic
AAGATTATTACCCCAAAAGA+AGG 0.511567 5:-3628266 None:intergenic
ATTAGATACATTACTACTCA+TGG 0.516384 5:+3612527 MsaT025065.1:CDS
TCTCCTCCAAATTCACCAGC+AGG 0.516678 5:-3628215 None:intergenic
AAAGAAGGCCTGTAGTCAGC+TGG 0.516901 5:-3628251 None:intergenic
GGGAGGTGAAGAACAAGTAC+TGG 0.518630 5:+3613983 MsaT025065.1:CDS
AGAAGGTTAAGAGAGGCCTT+TGG 0.525448 5:+3612480 MsaT025065.1:CDS
CCTGGTGGTAGACCTGGCTT+CGG 0.526626 5:+3629715 MsaT025065.1:CDS
GTCCTCCTGGTGATCGCCCT+AGG 0.527814 5:+3628035 MsaT025065.1:CDS
GTTGTAAAAGCTATTGCAGC+TGG 0.529157 5:-3613735 None:intergenic
GGACCTGCTGGTGAATTTGG+AGG 0.530997 5:+3628212 MsaT025065.1:CDS
CCAGAACCACGACCGAAGCC+AGG 0.533716 5:-3629727 None:intergenic
ACAAGAAGAGTTGAATGAAT+GGG 0.537109 5:+3613899 MsaT025065.1:CDS
GAGAGTGTTGAAGGACAAAT+GGG 0.544217 5:+3613963 MsaT025065.1:CDS
ACTCAATTCCATCATTGGTA+AGG 0.545851 5:-3627925 None:intergenic
GCTATTGCAGCTGGATGAGG+AGG 0.549719 5:-3613726 None:intergenic
CATCTTCTTCAGGTGACCAA+AGG 0.550800 5:-3612496 None:intergenic
GGAGGCCCAAGAGGACCTGC+TGG 0.551228 5:+3628200 MsaT025065.1:CDS
GGTATTTGCAGATCTCTCTA+CGG 0.553257 5:-3627657 None:intergenic
ACATTATTCTCTATCAATGG+TGG 0.555492 5:-3613786 None:intergenic
GCAATCTTGTAATATGGATG+AGG 0.555592 5:+3613839 MsaT025065.1:CDS
CACAAGACATACCTTGGAAG+AGG 0.559210 5:-3627678 None:intergenic
AGTGAAGTTCCTGAGAAAGC+TGG 0.559248 5:+3612563 MsaT025065.1:CDS
GTAATAGTTCATCCAAGCAA+AGG 0.564306 5:-3627897 None:intergenic
GTAGCAGGAACAATCTCAGA+TGG 0.565512 5:-3627971 None:intergenic
TCACCAGGAGGACCACCAAA+GGG 0.567521 5:-3628025 None:intergenic
TTAAACTCACAGAATCATGA+TGG 0.568777 5:-3613641 None:intergenic
ATGTGAGGGAAACCTTTGCT+TGG 0.569031 5:+3627885 MsaT025065.1:CDS
TGTAATATGGATGAGGAAGG+AGG 0.573816 5:+3613846 MsaT025065.1:CDS
AGCAGGCTAAGCCAGCTGGA+AGG 0.574627 5:+3628002 MsaT025065.1:CDS
TGTCTGTTCTACCAGGCAAG+TGG 0.576295 5:-3613335 None:intergenic
GTTAATTATAAGCCTTCATG+GGG 0.585238 5:+3612787 MsaT025065.1:CDS
AATTACCTAGGGCGATCACC+AGG 0.586300 5:-3628040 None:intergenic
GGCCTCCACGGTATCCATCA+CGG 0.588978 5:-3628184 None:intergenic
ATCTGCAAATACCTCTTCCA+AGG 0.590451 5:+3627667 MsaT025065.1:CDS
AAGAGGAAGGTTTACACCTG+AGG 0.591737 5:+3612757 MsaT025065.1:CDS
GATGATGTTGATGATGATCA+TGG 0.594936 5:-3613689 None:intergenic
GTAAGAGTTGTAGATTGAGA+TGG 0.595760 5:+3612708 MsaT025065.1:CDS
TGATGATGATGATCAATAGT+TGG 0.596624 5:-3613438 None:intergenic
CCGAAGCCAGGTCTACCACC+AGG 0.597635 5:-3629715 None:intergenic
ATTGAAACCTGTAGAAGGAA+AGG 0.599497 5:+3614300 MsaT025065.1:intron
GATGCAGAGCTTCAAATCTA+GGG 0.604467 5:+3627859 MsaT025065.1:CDS
TCAAATCTAGGGAATATGTG+AGG 0.607518 5:+3627870 MsaT025065.1:CDS
TTAAGGCCTGATATTAGAAG+AGG 0.608039 5:+3612740 MsaT025065.1:CDS
CAAATCTAGGGAATATGTGA+GGG 0.609242 5:+3627871 MsaT025065.1:CDS
TGAGTTTAAGTTCTGACACA+TGG 0.610610 5:+3613655 MsaT025065.1:CDS
ACTCTATTGCAGGGTCCTGG+TGG 0.611110 5:+3629700 MsaT025065.1:intron
TGTTGCCAACAACCCCATGA+AGG 0.617109 5:-3612799 None:intergenic
TCCCAGCTGAAAATAAAGCT+AGG 0.619685 5:-3613942 None:intergenic
TCTTGTAATATGGATGAGGA+AGG 0.621073 5:+3613843 MsaT025065.1:CDS
AGGAAGGTTTACACCTGAGG+AGG 0.624953 5:+3612760 MsaT025065.1:CDS
AGAAGAGTTGAATGAATGGG+TGG 0.627654 5:+3613902 MsaT025065.1:CDS
GGATACCGTGGAGGCCCAAG+AGG 0.629598 5:+3628191 MsaT025065.1:CDS
ACCATTGATAGAGAATAATG+TGG 0.633578 5:+3613788 MsaT025065.1:CDS
GAATAATGTGGAAAACAGCA+TGG 0.636117 5:+3613800 MsaT025065.1:CDS
AGATTTGGTGGTGACCGTGA+TGG 0.637340 5:+3628170 MsaT025065.1:CDS
TTCATGCTGCAATCAACAGA+AGG 0.642237 5:+3612463 MsaT025065.1:CDS
GGCCTGATATTAGAAGAGGA+AGG 0.643800 5:+3612744 MsaT025065.1:CDS
TATTTGACTGTACAAAGTGG+TGG 0.654421 5:+3614374 MsaT025065.1:CDS
AGTGTTGAAGGACAAATGGG+AGG 0.655479 5:+3613966 MsaT025065.1:CDS
GGTGAATTTGGAGGAGACAA+AGG 0.655884 5:+3628221 MsaT025065.1:CDS
GAATTTGGAGGAGACAAAGG+TGG 0.658883 5:+3628224 MsaT025065.1:CDS
GACCGTGATGGATACCGTGG+AGG 0.697879 5:+3628182 MsaT025065.1:CDS
GAACTGTAATTGATCAACTG+AGG 0.702739 5:-3613462 None:intergenic
AATCAACAGAAGGTTAAGAG+AGG 0.703939 5:+3612473 MsaT025065.1:CDS
GGTGACCGTGATGGATACCG+TGG 0.715974 5:+3628179 MsaT025065.1:CDS
TACCTAGGGCGATCACCAGG+AGG 0.726307 5:-3628037 None:intergenic
TGGTATTTGACTGTACAAAG+TGG 0.732730 5:+3614371 MsaT025065.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 3612452 3629786 3612452 ID=MsaG025065
Chr5 mRNA 3612452 3629786 3612452 ID=MsaT025065.1;Parent=MsaG025065
Chr5 exon 3612452 3612584 3612452 ID=MsaT025065.1.exon1;Parent=MsaT025065.1
Chr5 CDS 3612452 3612584 3612452 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3612693 3612822 3612693 ID=MsaT025065.1.exon2;Parent=MsaT025065.1
Chr5 CDS 3612693 3612822 3612693 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3613317 3614004 3613317 ID=MsaT025065.1.exon3;Parent=MsaT025065.1
Chr5 CDS 3613317 3614004 3613317 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3614314 3614439 3614314 ID=MsaT025065.1.exon4;Parent=MsaT025065.1
Chr5 CDS 3614314 3614439 3614314 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3627640 3627688 3627640 ID=MsaT025065.1.exon5;Parent=MsaT025065.1
Chr5 CDS 3627640 3627688 3627640 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3627777 3628056 3627777 ID=MsaT025065.1.exon6;Parent=MsaT025065.1
Chr5 CDS 3627777 3628056 3627777 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3628142 3628277 3628142 ID=MsaT025065.1.exon7;Parent=MsaT025065.1
Chr5 CDS 3628142 3628277 3628142 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Chr5 exon 3629712 3629786 3629712 ID=MsaT025065.1.exon8;Parent=MsaT025065.1
Chr5 CDS 3629712 3629786 3629712 ID=cds.MsaT025065.1;Parent=MsaT025065.1
Gene Sequence

>MsaT025065.1

ATGGGTCACCATTCATGCTGCAATCAACAGAAGGTTAAGAGAGGCCTTTGGTCACCTGAAGAAGATGAGAAACTCATTAGATACATTACTACTCATGGTTATGGTTGCTGGAGTGAAGTTCCTGAGAAAGCTGGGCTTCAAAGGTGTGGTAAGAGTTGTAGATTGAGATGGATAAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGCCACTTGCCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAGTCTTCTTCTTCTTCTCCTAATTTATCAACACCAACTATTGATCATCATCATCATCCTCAGTTGATCAATTACAGTTCCATTAATCAACTAGATAATTACTTTACCAACCAAGAAAATGTAACAACAAAAGAAACCTTATTTTCATCAACATGTCCTTTATTTATGTTTGACACAAGTTCACTACATGAAACAACAGCAACAGACACCAATGTAATAAGACCAGAAGTACTATTCCATCATGATTCTGTGAGTTTAAGTTCTGACACATGGAACTTGAATCACCATGATCATCATCAACATCATCAAGTTCAGACACTTCCTCCTCATCCAGCTGCAATAGCTTTTACAACAATTCATGATACTAGTAATTATAATCTTCCACCATTGATAGAGAATAATGTGGAAAACAGCATGGTGCAAATTGATCAAGTGCAATCTTGTAATATGGATGAGGAAGGAGGAGAGTTATTAACATTGGAGTCATTGCAAAGACAAGAAGAGTTGAATGAATGGGTGGAAACTCAACAACAGTGTCCTAGCTTTATTTTCAGCTGGGAGAGTGTTGAAGGACAAATGGGAGGTGAAGAACAAGTACTGAAGGAAAGGTTATTTGATTTTGAAGATACTTGCATACAAAAGATGTATTCGATCATTTGGTATTTGACTGTACAAAGTGGTGGTTTTTTCTTGAATGATAATAATGGGTTTGCCTTTTCAACATTTATCATTACTGAGAAAAACCGTAGAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGATTTCAATTTGGCTAAGCACCCAGAAATCGATGTGCCAAATCTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCTAGGGAATATGTGAGGGAAACCTTTGCTTGGATGAACTATTACTGGTTCCTTACCAATGATGGAATTGAGTTTCTCAGGACTTATTTGAATCTTCCATCTGAGATTGTTCCTGCTACTTTGAAGAAGCAGGCTAAGCCAGCTGGAAGGCCCTTTGGTGGTCCTCCTGGTGATCGCCCTAGGGGCCCACCAAGATTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGAGGCCCAAGAGGACCTGCTGGTGAATTTGGAGGAGACAAAGGTGGAGCTCCAGCTGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGTAGACCTGGCTTCGGTCGTGGTTCTGGTGGCTTTGGAGCACCAACTAGTTCAAACGATGCTTAA
Protein sequence

>MsaT025065.1

MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSSPNLSTPTIDHHHHPQLINYSSINQLDNYFTNQENVTTKETLFSSTCPLFMFDTSSLHETTATDTNVIRPEVLFHHDSVSLSSDTWNLNHHDHHQHHQVQTLPPHPAAIAFTTIHDTSNYNLPPLIENNVENSMVQIDQVQSCNMDEEGGELLTLESLQRQEELNEWVETQQQCPSFIFSWESVEGQMGGEEQVLKERLFDFEDTCIQKMYSIIWYLTVQSGGFFLNDNNGFAFSTFIITEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA*