AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025084

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025084 MtrunA17_Chr5g0397501 96.908 1326 37 2 1 1326 1 1322 0.0 2650
MsaG025084 MtrunA17_Chr5g0397511 95.464 507 23 0 1329 1835 1 507 0.0 1014
MsaG025084 MtrunA17_Chr1g0189211 40.241 415 204 7 298 679 259 662 5.26e-90 321
MsaG025084 MtrunA17_Chr1g0189211 58.108 74 27 1 23 92 145 218 3.34e-17 88.6
MsaG025084 MtrunA17_Chr2g0303101 39.578 427 211 6 291 682 154 568 1.35e-87 310
MsaG025084 MtrunA17_Chr2g0303101 54.054 74 30 2 23 92 47 120 1.01e-13 77.0
MsaG025084 MtrunA17_Chr8g0380981 38.926 447 222 6 291 700 146 578 1.93e-86 307
MsaG025084 MtrunA17_Chr8g0380981 50.000 74 33 1 23 92 38 111 5.28e-14 77.8
MsaG025084 MtrunA17_Chr7g0261401 31.678 423 242 6 304 687 236 650 1.17e-57 216
MsaG025084 MtrunA17_Chr7g0261401 46.512 86 40 2 28 107 117 202 2.13e-13 75.9
MsaG025084 MtrunA17_Chr5g0410721 35.467 375 209 10 294 656 158 511 1.18e-56 213
MsaG025084 MtrunA17_Chr1g0164731 33.099 426 249 12 305 714 124 529 3.97e-54 201
MsaG025084 MtrunA17_Chr1g0164761 34.232 371 178 12 306 656 88 412 1.18e-46 177
MsaG025084 MtrunA17_Chr1g0199511 37.402 254 144 4 368 609 266 516 1.93e-42 171
MsaG025084 MtrunA17_Chr3g0116441 34.909 275 156 6 305 571 100 359 2.64e-38 157
MsaG025084 MtrunA17_Chr7g0214951 40.870 115 43 3 421 527 104 201 1.13e-15 78.2
MsaG025084 MtrunA17_Chr3g0129871 50.943 53 26 0 240 292 15 67 1.73e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025084 AT1G63490.4 52.487 1347 598 13 1 1323 5 1333 0.0 1409
MsaG025084 AT1G63490.4 35.556 225 118 3 1610 1833 1263 1461 7.10e-35 147
MsaG025084 AT1G63490.2 52.487 1347 597 14 1 1323 5 1332 0.0 1405
MsaG025084 AT1G63490.2 35.556 225 118 3 1610 1833 1262 1460 7.28e-35 147
MsaG025084 AT1G63490.1 50.276 1088 508 10 260 1323 1 1079 0.0 1090
MsaG025084 AT1G63490.1 35.556 225 118 3 1610 1833 1009 1207 3.71e-35 147
MsaG025084 AT1G63490.3 44.432 880 458 9 468 1323 1 873 0.0 730
MsaG025084 AT1G63490.3 35.556 225 118 3 1610 1833 803 1001 3.18e-35 147
MsaG025084 AT4G20400.2 41.259 429 203 9 294 687 105 519 1.96e-90 316
MsaG025084 AT4G20400.1 41.492 429 202 9 294 687 162 576 4.24e-90 317
MsaG025084 AT4G20400.1 48.649 74 34 1 23 92 51 124 4.42e-14 78.6
MsaG025084 AT1G08620.3 40.515 427 205 7 298 687 274 688 3.36e-89 319
MsaG025084 AT1G08620.2 40.515 427 205 7 298 687 260 674 3.37e-89 319
MsaG025084 AT1G08620.4 40.515 427 205 7 298 687 260 674 3.37e-89 319
MsaG025084 AT1G08620.1 40.515 427 205 7 298 687 260 674 3.37e-89 319
MsaG025084 AT1G30810.3 40.143 421 208 8 298 687 169 576 4.08e-87 305
MsaG025084 AT1G30810.3 47.872 94 41 3 5 92 36 127 3.29e-16 85.5
MsaG025084 AT1G30810.2 40.143 421 208 8 298 687 169 576 4.08e-87 305
MsaG025084 AT1G30810.2 47.872 94 41 3 5 92 36 127 3.29e-16 85.5
MsaG025084 AT1G30810.1 40.143 421 208 8 298 687 169 576 4.08e-87 305
MsaG025084 AT1G30810.1 47.872 94 41 3 5 92 36 127 3.29e-16 85.5
MsaG025084 AT2G34880.1 38.028 426 225 9 294 695 169 579 3.39e-84 295
MsaG025084 AT2G34880.1 54.054 74 30 1 23 92 56 129 7.43e-16 84.3
MsaG025084 AT2G38950.1 34.063 411 215 9 305 679 203 593 8.52e-60 221
MsaG025084 AT5G46910.2 35.584 385 195 12 294 656 172 525 1.56e-57 212
MsaG025084 AT5G46910.1 35.584 385 195 12 294 656 172 525 8.57e-57 213
MsaG025084 AT5G04240.1 37.295 244 144 3 374 609 242 484 7.35e-38 156
MsaG025084 AT3G48430.1 31.618 272 168 6 305 567 121 383 1.46e-32 139
MsaG025084 AT3G01460.1 33.071 127 64 4 228 342 1269 1386 1.01e-12 74.3

Find 387 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATCTCATTCCTGTGTTTC+TGG 0.071956 5:+3787306 MsaT025084.1:CDS
TCCCTCTTCTGTTTCTTTCT+AGG 0.152145 5:-3793484 None:intergenic
AATAACTTGCCTAAATTAAA+AGG 0.167352 5:+3773916 MsaT025084.1:CDS
AGCAAATTCCGTTGGGAAAT+TGG 0.191435 5:+3773569 MsaT025084.1:CDS
GGTATAGTTGGAGATGAAAT+TGG 0.198735 5:-3772785 None:intergenic
GCACCTTCAGTTTATGATAA+TGG 0.220075 5:-3780671 None:intergenic
CACCTTCAGTTTATGATAAT+GGG 0.225553 5:-3780670 None:intergenic
TGTTGATGATATGAAAATTA+AGG 0.230101 5:+3773399 MsaT025084.1:CDS
GAATTGTTCCACCGAATAAT+TGG 0.232815 5:+3772906 MsaT025084.1:CDS
TGTTTCTGATTTGTTTCATT+TGG 0.238307 5:-3773832 None:intergenic
TTTAGTCTCTTTCACGTAGA+TGG 0.243554 5:-3781448 None:intergenic
CCATCTGTGTTGCAAGAAAA+TGG 0.259746 5:+3777125 MsaT025084.1:CDS
ATTCCATAGGGTTCAGCTTC+AGG 0.265228 5:-3772878 None:intergenic
AAAGCATCTTAAAGTATCTT+TGG 0.266890 5:+3786295 MsaT025084.1:CDS
CTTTCTAGGGTTTGTATGCC+TGG 0.271084 5:-3793470 None:intergenic
CAATCATTCTCCTTGTTTAG+AGG 0.272940 5:+3786592 MsaT025084.1:CDS
CAAATGGGAAAGAATGTTTA+AGG 0.276394 5:+3793572 MsaT025084.1:CDS
AAAATTGATTATTGCTATAA+AGG 0.277278 5:+3791597 MsaT025084.1:CDS
TGGGATGTAGGTTCGGGATA+TGG 0.277492 5:+3780488 MsaT025084.1:intron
AACAACCCCATGATGCTTCT+TGG 0.283845 5:-3773380 None:intergenic
TTTCAGCATGTAGTGATCTT+TGG 0.284456 5:-3792156 None:intergenic
GGAAAGCTGAACAGTTTCTT+TGG 0.286662 5:+3780368 MsaT025084.1:CDS
GCCAATCCTGTAGGATGTTT+TGG 0.296223 5:+3787269 MsaT025084.1:intron
GATTTGTGTAAGGTGTTTAA+TGG 0.297746 5:+3773115 MsaT025084.1:CDS
TGCAAATAGAGAAGAAGTTC+TGG 0.300936 5:+3773728 MsaT025084.1:CDS
TCTTACTTGTTCTACTTGTA+TGG 0.308333 5:+3789395 MsaT025084.1:CDS
AAGGCCTTTGCATGCAAATC+TGG 0.311114 5:+3791511 MsaT025084.1:CDS
CCCTCTTCTGTTTCTTTCTA+GGG 0.311178 5:-3793483 None:intergenic
AGATATTCTTGCTGATTATC+AGG 0.311533 5:+3787434 MsaT025084.1:CDS
TCCTGTCTATAGCACACTTC+AGG 0.315493 5:+3777151 MsaT025084.1:CDS
GAATGTTGGTTTGCTTCTTA+AGG 0.316666 5:+3785121 MsaT025084.1:intron
CTTAAACATTCTTTCCCATT+TGG 0.323528 5:-3793571 None:intergenic
GGCTATTAAAATGACCTTTA+CGG 0.330834 5:+3788077 MsaT025084.1:intron
TTCTGCCCATTTCTGAGCTT+CGG 0.333478 5:-3780523 None:intergenic
TCGGAAAGTTGAGGACTTGC+AGG 0.335087 5:+3786167 MsaT025084.1:CDS
AGGGTCCTCTTATTTGAAAA+TGG 0.339709 5:+3778652 MsaT025084.1:CDS
TTTAATGGTGTTAAGAGGTT+TGG 0.341660 5:+3773130 MsaT025084.1:CDS
CTGCAGTTGTATGCAGTTGC+AGG 0.342291 5:+3778933 MsaT025084.1:CDS
TGACTGCCTCTGCACAATTA+AGG 0.342513 5:-3778113 None:intergenic
AAAGGAGGTTTCCAATTATT+CGG 0.343099 5:-3772917 None:intergenic
TTCTGAAGTGCATCAATCTC+TGG 0.343707 5:-3784949 None:intergenic
TACCATGGTGGTTTCAATCT+TGG 0.345610 5:+3778001 MsaT025084.1:CDS
ATGCATCTATTACCGCATTA+AGG 0.346653 5:+3780347 MsaT025084.1:CDS
TTCAGCATGTAGTGATCTTT+GGG 0.348789 5:-3792155 None:intergenic
AAGACGTTTGAGCTGGAGTA+TGG 0.349029 5:+3773025 MsaT025084.1:CDS
TTGTGTGATAGGTGTGATAA+AGG 0.350074 5:+3773514 MsaT025084.1:CDS
CATCTTCAGTTCCTACATAT+CGG 0.352101 5:-3778772 None:intergenic
AAAAGATGCATGGATAATAT+TGG 0.356831 5:+3789139 MsaT025084.1:CDS
CTTGCATCATGTTTGCATCT+AGG 0.360998 5:+3793521 MsaT025084.1:CDS
ATCAGTTTGTCTTGTGTGCT+TGG 0.361011 5:+3785839 MsaT025084.1:CDS
TGGACGGTGCTTATTTGAAT+TGG 0.363130 5:+3786394 MsaT025084.1:CDS
ACTTCAGAATTTATTAAATC+AGG 0.366039 5:+3784963 MsaT025084.1:CDS
AAGTGCTGGTACAGTGTTCC+TGG 0.368399 5:+3775741 MsaT025084.1:CDS
AAGTTGAAAAGGTGGAAAAT+TGG 0.369044 5:+3789113 MsaT025084.1:CDS
CTGGGTAGAAATAGCCAAAA+AGG 0.370198 5:+3792208 MsaT025084.1:CDS
GGTTATGTATGGAAATGATT+TGG 0.370997 5:+3773783 MsaT025084.1:CDS
CAAGTTCGTTCCCTATAACT+TGG 0.373258 5:-3788586 None:intergenic
TGGCTCCCACACGGTACATT+TGG 0.373521 5:+3778153 MsaT025084.1:CDS
TGTAAGAGTAAGAGCGATCC+AGG 0.376652 5:+3773331 MsaT025084.1:CDS
GGACAGGCATCAAATGATTC+AGG 0.378549 5:+3792303 MsaT025084.1:intron
GATAGATCACTATACATATA+TGG 0.379836 5:+3789303 MsaT025084.1:CDS
GGCTTCTATTTCTGACTTTG+AGG 0.380573 5:+3785910 MsaT025084.1:CDS
AGGTTGTTGATGGGAAGAAA+TGG 0.380956 5:+3773164 MsaT025084.1:CDS
GAATTGGATACCACTGTTCA+TGG 0.381216 5:+3786410 MsaT025084.1:CDS
AGTTCCTCATTTACATCAAC+AGG 0.383792 5:-3792378 None:intergenic
CAATTAGAAGATGCTAAATA+TGG 0.385291 5:-3786129 None:intergenic
TCTATTTGCACCCTTGAAAC+AGG 0.385704 5:-3773715 None:intergenic
TCACAATATCACTGGTGTTA+TGG 0.387672 5:+3773960 MsaT025084.1:CDS
AGAAGCGAAATTGTTACTTC+AGG 0.392360 5:+3780785 MsaT025084.1:CDS
TGGGGCTCATTGCATGGTAC+TGG 0.393922 5:-3780651 None:intergenic
GGTTGTTGATGGGAAGAAAT+GGG 0.397367 5:+3773165 MsaT025084.1:CDS
TTGGACAGGGACCTGTTTCA+AGG 0.397459 5:+3773704 MsaT025084.1:CDS
GATTTGGATACATCTATCTA+TGG 0.398601 5:+3773799 MsaT025084.1:CDS
GTTTGACCGAAGCTCAGAAA+TGG 0.400920 5:+3780517 MsaT025084.1:CDS
TACATGGCAGGGAATGTCTA+TGG 0.401756 5:+3792124 MsaT025084.1:intron
CAAGGTTTGTGAGGTGTAAT+GGG 0.402131 5:+3773197 MsaT025084.1:CDS
TTTCTGAATCTGTTCAATAG+TGG 0.403641 5:-3791959 None:intergenic
ATCTTCAGTTCCTACATATC+GGG 0.407817 5:-3778771 None:intergenic
AATCTTGGAGGGAGAAACTT+TGG 0.410294 5:+3778702 MsaT025084.1:CDS
GGCAAGTTATTCAAATTCCA+TGG 0.411504 5:-3773904 None:intergenic
ATAACACGCAATCATCCTTC+CGG 0.413360 5:-3792885 None:intergenic
TCTTCAGTTGGATAATAAAC+AGG 0.414313 5:-3772815 None:intergenic
GGGTTTGTATGCCTGGGAGA+AGG 0.414532 5:-3793463 None:intergenic
GGTTTGTATGCCTGGGAGAA+GGG 0.416199 5:-3793462 None:intergenic
ATTCTTAAGGCTAGAAATTG+AGG 0.416853 5:+3785802 MsaT025084.1:intron
CAGAAGCTAATTCCTGGTTA+AGG 0.417266 5:+3786097 MsaT025084.1:CDS
GGAGGATTTAGATTTGTGTA+AGG 0.419324 5:+3773105 MsaT025084.1:CDS
GAAGAAGTTCTGGGAGATTG+TGG 0.419470 5:+3773738 MsaT025084.1:CDS
AAGCAGCAGTTACATAGGTT+TGG 0.422651 5:-3789348 None:intergenic
CAAGTTCATATACTTTATCT+AGG 0.422798 5:-3792335 None:intergenic
GAGGTTTGGTGGTTATGATA+AGG 0.422831 5:+3773144 MsaT025084.1:CDS
GGTTATGATAAGGTTGTTGA+TGG 0.423265 5:+3773154 MsaT025084.1:CDS
GAAAGCTGAACAGTTTCTTT+GGG 0.423318 5:+3780369 MsaT025084.1:CDS
CAATGTCGTTGTATGTTAGA+AGG 0.424866 5:+3785003 MsaT025084.1:CDS
GTATAGTTGGAGATGAAATT+GGG 0.425199 5:-3772784 None:intergenic
CGATCCAGGGGTGGAGAGTT+CGG 0.426328 5:+3773345 MsaT025084.1:CDS
TTCTAACATACAACGACATT+GGG 0.426801 5:-3785001 None:intergenic
AGTAAGAGATTTCTGATCTT+CGG 0.428082 5:-3789379 None:intergenic
AGAGCATCTTTATGATTATG+AGG 0.428209 5:+3773264 MsaT025084.1:CDS
CTCCTAGTTGCTCTTCTAAA+CGG 0.428303 5:-3793610 None:intergenic
CATTATCAGAAGCTAATTCC+TGG 0.429965 5:+3786091 MsaT025084.1:CDS
ATGGTACCCTGGCTATATAT+TGG 0.430550 5:+3773979 MsaT025084.1:CDS
GCAAGGTTTGTGAGGTGTAA+TGG 0.433345 5:+3773196 MsaT025084.1:CDS
TTGCCGACAGAAAGCTTTGA+AGG 0.433480 5:+3785463 MsaT025084.1:CDS
AAGTTCGTTCCCTATAACTT+GGG 0.435171 5:-3788585 None:intergenic
ATGCAAACCTTGAGATTCAT+AGG 0.435905 5:-3785027 None:intergenic
ATGGCTTAGGAGAGCGTTAG+AGG 0.436582 5:+3787362 MsaT025084.1:CDS
TTTGTTTCAGATATCTGAGT+TGG 0.440547 5:+3781395 MsaT025084.1:intron
GAAACCACCATGGTAGGCTC+TGG 0.440874 5:-3777993 None:intergenic
CAGTGGTTTATTGTTTAAAG+TGG 0.443124 5:+3786439 MsaT025084.1:CDS
AGGTGATGCTATTGTGTGAT+AGG 0.443170 5:+3773503 MsaT025084.1:CDS
TGCTTGGTGTCGCCATGCGT+TGG 0.443216 5:+3785855 MsaT025084.1:CDS
TTGGTTTGCTTCTTAAGGAA+TGG 0.444525 5:+3785126 MsaT025084.1:CDS
GTTAATATTCTCCAGGAGCC+TGG 0.445644 5:+3777950 MsaT025084.1:intron
AGGTGTTTAATGGTGTTAAG+AGG 0.447558 5:+3773125 MsaT025084.1:CDS
CTATTGAAAGTACTGGTTGA+TGG 0.447941 5:+3787333 MsaT025084.1:CDS
TGGTTTGCTTCTTAAGGAAT+GGG 0.448809 5:+3785127 MsaT025084.1:CDS
AAAGTAATAACAAAATTTCC+AGG 0.450638 5:-3777968 None:intergenic
CTGACTTTGAGGACATGATA+AGG 0.451932 5:+3785921 MsaT025084.1:CDS
GAGGTGTAATGGGAAGATTT+CGG 0.453749 5:+3773207 MsaT025084.1:CDS
CAAGTCAACATATTATTAAG+TGG 0.455075 5:+3791925 MsaT025084.1:CDS
ATAACATCTGGTGTATCTCT+TGG 0.455221 5:+3786491 MsaT025084.1:CDS
TGAGGTGTGGTCGAGTCGTC+AGG 0.455581 5:+3780572 MsaT025084.1:CDS
TGGTGCTCTATTGAAAGTAC+TGG 0.456728 5:+3787326 MsaT025084.1:CDS
AAGAGATACACCAGATGTTA+TGG 0.456755 5:-3786489 None:intergenic
AATGGTGTTAAGAGGTTTGG+TGG 0.457247 5:+3773133 MsaT025084.1:CDS
GGGGTCGGTTGGTGAGGTTG+AGG 0.457412 5:+3773762 MsaT025084.1:CDS
AGCTATCACTTGCGGTGCAT+TGG 0.458333 5:+3790417 MsaT025084.1:intron
TCGCCATGCGTTGGGAGGAA+AGG 0.460253 5:+3785864 MsaT025084.1:CDS
TTCAAGTTCTGAGCAACTAA+AGG 0.461546 5:-3789077 None:intergenic
CTCCTTTAGCAGTTGCTGAA+TGG 0.461746 5:-3785691 None:intergenic
TCTGACCTGTCATGGTTAGT+AGG 0.462338 5:-3793001 None:intergenic
CGTTGACATAAGCTGAAGAA+AGG 0.463518 5:-3791552 None:intergenic
GCTGAACAGTTTCTTTGGGC+TGG 0.463653 5:+3780373 MsaT025084.1:CDS
AGTTCGGATAGGGAGAGCTT+TGG 0.463981 5:+3773610 MsaT025084.1:CDS
TTGAAGAGCATTCTTGAAGA+AGG 0.463991 5:+3785287 MsaT025084.1:CDS
GGTTTATCTTTGAAAATTCA+AGG 0.464367 5:+3785308 MsaT025084.1:CDS
AGGTCGAGGAGGAGATGGTT+TGG 0.465503 5:+3773685 MsaT025084.1:CDS
ACAGGTGCTGAAGGTATAGT+TGG 0.465671 5:-3772797 None:intergenic
GGCTGTGCATCGAAAAGGTC+AGG 0.466218 5:-3777068 None:intergenic
CGCCATGCGTTGGGAGGAAA+GGG 0.466752 5:+3785865 MsaT025084.1:CDS
GCTTGGTGTCGCCATGCGTT+GGG 0.467028 5:+3785856 MsaT025084.1:CDS
CCATTCAGATGCTGTGTCAT+GGG 0.468220 5:+3785196 MsaT025084.1:CDS
AATATCATCTGAAGTTGAAA+AGG 0.468470 5:+3789102 MsaT025084.1:CDS
GATACATCTATCTATGGTAG+TGG 0.470580 5:+3773805 MsaT025084.1:CDS
TATTGAAAGTACTGGTTGAT+GGG 0.470909 5:+3787334 MsaT025084.1:CDS
GAGGGATTATTGTGGGAAGA+AGG 0.471748 5:+3773057 MsaT025084.1:CDS
ATCCAGTCCGCCATAACATC+TGG 0.473833 5:+3786479 MsaT025084.1:CDS
AGTCTTCTCGTTTATCTCCT+CGG 0.474074 5:+3778741 MsaT025084.1:CDS
TGTCGAACGCCCTTTGATCC+CGG 0.476017 5:+3792866 MsaT025084.1:CDS
AAGTATCTTTGGAAGAAAGA+AGG 0.478046 5:+3786306 MsaT025084.1:CDS
TTTCTAGGGTTTGTATGCCT+GGG 0.478145 5:-3793469 None:intergenic
CCCAACGGAATTTGCTTCAA+CGG 0.478420 5:-3773562 None:intergenic
TTCTGAATCTGTTCAATAGT+GGG 0.479520 5:-3791958 None:intergenic
TGTGGAGGGGTCGGTTGGTG+AGG 0.480136 5:+3773756 MsaT025084.1:CDS
TCCAGCGAATATTGCTTCCC+CGG 0.480546 5:-3773640 None:intergenic
ATCCATTCAGCAACTGCTAA+AGG 0.480727 5:+3785689 MsaT025084.1:CDS
CAAAGGCCTTCTCAATAAGT+TGG 0.481169 5:-3791498 None:intergenic
TAGCATTCCAATATATAGCC+AGG 0.481264 5:-3773986 None:intergenic
CTGGGAGATTGTGGAGGGGT+CGG 0.481973 5:+3773747 MsaT025084.1:CDS
GAGAATGATTGCAGAAACAT+AGG 0.482153 5:-3786580 None:intergenic
CTTCTCTACCGTCATTCACT+TGG 0.482564 5:+3779889 MsaT025084.1:CDS
TTAGTCTCTTTCACGTAGAT+GGG 0.482717 5:-3781447 None:intergenic
TTTAGGGAGAGTTCACAGTC+AGG 0.482791 5:+3785238 MsaT025084.1:CDS
TTGATGGGGTCGAATGGCTT+AGG 0.484200 5:+3787349 MsaT025084.1:CDS
TTGACAATTTACTTCCGTAA+AGG 0.487728 5:-3788091 None:intergenic
AATGCCCTGGCTTGACTACC+AGG 0.488490 5:-3775759 None:intergenic
CCGTGTGGGAGCCAGTCAGC+TGG 0.489230 5:-3778144 None:intergenic
CGGAGAGATTCTTTCAGTTG+AGG 0.489839 5:+3785889 MsaT025084.1:CDS
GGGAAATCCCAATATTCAAA+AGG 0.492126 5:+3790501 MsaT025084.1:CDS
ATCCTCAAAATGCCAGCAAA+AGG 0.493068 5:-3774016 None:intergenic
GGTGAGGTTGAGGTTATGTA+TGG 0.493896 5:+3773772 MsaT025084.1:CDS
ATTGTGTGTCAAACTCTGTT+CGG 0.493928 5:+3786148 MsaT025084.1:CDS
CAGAAACACAGGAATGAGAT+AGG 0.495267 5:-3787305 None:intergenic
GAATCTAGATCCAATGCAAA+AGG 0.495870 5:-3772935 None:intergenic
ACAGGCGATTCATAAGCTTC+AGG 0.496534 5:+3772979 MsaT025084.1:CDS
AATGTAAAAGTGGGTTGCAT+GGG 0.496716 5:+3773479 MsaT025084.1:CDS
AATCTATTGATGATAAGTTA+TGG 0.496758 5:+3773863 MsaT025084.1:CDS
TTAATTGTTTGAGTTCGGAT+AGG 0.496883 5:+3773599 MsaT025084.1:CDS
TTCTTAAGGCTAGAAATTGA+GGG 0.497224 5:+3785803 MsaT025084.1:intron
CAACAAAGCAGCAGTTACAT+AGG 0.497526 5:-3789353 None:intergenic
CTTGTTCTACTTGTATGGAC+TGG 0.498165 5:+3789400 MsaT025084.1:CDS
TAATTGTTTGAGTTCGGATA+GGG 0.499110 5:+3773600 MsaT025084.1:CDS
CAGAGAGATAGAGATATTGC+TGG 0.499289 5:-3778913 None:intergenic
GTTTGTATGCCTGGGAGAAG+GGG 0.499386 5:-3793461 None:intergenic
ATCATCCTTCCGGGATCAAA+GGG 0.499505 5:-3792875 None:intergenic
ATCTTATGAATAAATTCTAA+AGG 0.499809 5:-3772851 None:intergenic
CGGTATCCAAGAAGCATCAT+GGG 0.500771 5:+3773374 MsaT025084.1:CDS
TCGGTATCCAAGAAGCATCA+TGG 0.501410 5:+3773373 MsaT025084.1:CDS
TGGACAGGGACCTGTTTCAA+GGG 0.502224 5:+3773705 MsaT025084.1:CDS
TGGCAAGTTGCAAAATCAAA+AGG 0.502448 5:+3789323 MsaT025084.1:CDS
GGGAGGTTGCAAGGTTTGTG+AGG 0.502755 5:+3773188 MsaT025084.1:CDS
ACCATTCAGATGCTGTGTCA+TGG 0.503189 5:+3785195 MsaT025084.1:CDS
GTGTTCCTGGTAGTCAAGCC+AGG 0.504083 5:+3775754 MsaT025084.1:CDS
TATGGAAATATGCAGAATGT+TGG 0.504343 5:+3785107 MsaT025084.1:intron
TAACACGCAATCATCCTTCC+GGG 0.504392 5:-3792884 None:intergenic
ATTTGTGAGCAATGTAAAAG+TGG 0.504631 5:+3773469 MsaT025084.1:CDS
AATCATCCTTCCGGGATCAA+AGG 0.504866 5:-3792876 None:intergenic
GGCCCTTTCCTCCCAACGCA+TGG 0.505110 5:-3785867 None:intergenic
TTGATGTAAATGAGGAACTC+AGG 0.506593 5:+3792382 MsaT025084.1:CDS
GGTGGAGAGTTCGGTCAGTT+CGG 0.506687 5:+3773354 MsaT025084.1:CDS
TGTCAACTTGAAGAAGCCAT+TGG 0.506831 5:+3788108 MsaT025084.1:CDS
CGGAAATGTCCCCGATATGT+AGG 0.507634 5:+3778761 MsaT025084.1:CDS
GCCGTTGAAGCAAATTCCGT+TGG 0.507654 5:+3773561 MsaT025084.1:CDS
TACCGCAGTTGAGGCTACTA+AGG 0.508191 5:+3785168 MsaT025084.1:CDS
CTTCTAACATACAACGACAT+TGG 0.508433 5:-3785002 None:intergenic
CAAGTTATAGGGAACGAACT+TGG 0.509200 5:+3788587 MsaT025084.1:CDS
AGACCTGAAGCTGAACCCTA+TGG 0.512319 5:+3772875 MsaT025084.1:CDS
CGTTTGAGCTGGAGTATGGT+AGG 0.512739 5:+3773029 MsaT025084.1:CDS
TTCAGCTCAATCTCAACTAC+AGG 0.513357 5:-3785431 None:intergenic
AGTAAAGGTACGAGCACGAG+TGG 0.514944 5:+3773304 MsaT025084.1:CDS
TTATATCAATCAGGCATGGA+TGG 0.515539 5:+3783444 MsaT025084.1:intron
CAGATAGGTCGAGGAGGAGA+TGG 0.517677 5:+3773680 MsaT025084.1:CDS
TTTGACCGAAGCTCAGAAAT+GGG 0.518030 5:+3780518 MsaT025084.1:CDS
GCTTCTTTGTGTAGTAGCCC+AGG 0.518592 5:+3778227 MsaT025084.1:CDS
CTTTCAGACGCATTGCAGAT+AGG 0.518605 5:+3773665 MsaT025084.1:CDS
TGCAATAATCTGACCTGTCA+TGG 0.521459 5:-3793009 None:intergenic
TCTAGTTGTGTACAGGTGAA+TGG 0.522126 5:+3780244 MsaT025084.1:intron
CCGTTGAAGCAAATTCCGTT+GGG 0.524050 5:+3773562 MsaT025084.1:CDS
CACCAGATGTTATGGCGGAC+TGG 0.524929 5:-3786481 None:intergenic
ACCTGAAGTGTGCTATAGAC+AGG 0.526253 5:-3777152 None:intergenic
TGAATTGCTTGGTCATGCAC+TGG 0.528563 5:+3792189 MsaT025084.1:CDS
GAGGAGGAGATGGTTTGGAC+AGG 0.528649 5:+3773690 MsaT025084.1:CDS
AACTTATCATCAATAGATTG+TGG 0.529072 5:-3773859 None:intergenic
AACATGATGCAAGTGTGATT+CGG 0.529938 5:-3793511 None:intergenic
TTGTTGATGGGAAGAAATGG+GGG 0.530821 5:+3773167 MsaT025084.1:CDS
TACTGGTTGATGGGGTCGAA+TGG 0.530976 5:+3787343 MsaT025084.1:CDS
AAACCACCATGGTAGGCTCT+GGG 0.531407 5:-3777992 None:intergenic
TCTGAAGTGCATCAATCTCT+GGG 0.531936 5:-3784948 None:intergenic
AACAATTCTACAAATTCCAT+AGG 0.532031 5:-3772891 None:intergenic
AGGATTTGAAAGTGAAGGAT+CGG 0.532408 5:+3773419 MsaT025084.1:CDS
GCTGCTTCATGCACTGCAGA+AGG 0.533016 5:+3789186 MsaT025084.1:CDS
ACATCAACATCTAATTCAGC+AGG 0.533284 5:-3783499 None:intergenic
AATTGGATACCACTGTTCAT+GGG 0.533604 5:+3786411 MsaT025084.1:CDS
TGATTCGAAGACGTTTGAGC+TGG 0.533945 5:+3773018 MsaT025084.1:CDS
TCTTTGAATTCATCTTCAGT+TGG 0.535029 5:-3772827 None:intergenic
GCAAGTTATTCAAATTCCAT+GGG 0.538554 5:-3773903 None:intergenic
CCCATGACACAGCATCTGAA+TGG 0.539587 5:-3785196 None:intergenic
CTCAACTGAAAGAATCTCTC+CGG 0.539989 5:-3785888 None:intergenic
TTACCTTCAAAGCTTTCTGT+CGG 0.541982 5:-3785466 None:intergenic
TCAAGCATCTTGTTCTACAC+TGG 0.542021 5:+3786541 MsaT025084.1:CDS
AGTGAAGGATCGGAAAGTAA+AGG 0.542799 5:+3773429 MsaT025084.1:CDS
TCTTTGGGCTGGTTCCGAGA+TGG 0.543674 5:+3780384 MsaT025084.1:CDS
TGGCTTTGAATTCCTTAACC+AGG 0.544239 5:-3786109 None:intergenic
ACCTACCTTCTCAAATGCCC+TGG 0.544659 5:-3775772 None:intergenic
GCCGGGGAAGCAATATTCGC+TGG 0.545338 5:+3773639 MsaT025084.1:CDS
CTGACCGAACTCTCCACCCC+TGG 0.545867 5:-3773349 None:intergenic
GAGATTGTGGAGGGGTCGGT+TGG 0.545938 5:+3773751 MsaT025084.1:CDS
GCACGTTCTCTACTTGATGA+TGG 0.545973 5:+3786374 MsaT025084.1:CDS
GATTCAGAAACATCTGAAAG+AGG 0.547055 5:+3791972 MsaT025084.1:CDS
TTCTGAGCAACTAAAGGCAA+TGG 0.548257 5:-3789071 None:intergenic
GCAAATAGAGAAGAAGTTCT+GGG 0.551112 5:+3773729 MsaT025084.1:CDS
GCAGTTGCTGAATGGATTCG+AGG 0.551225 5:-3785683 None:intergenic
TGTGTGATAGGTGTGATAAA+GGG 0.553046 5:+3773515 MsaT025084.1:CDS
GATCAGGCTGTGCATCGAAA+AGG 0.553615 5:-3777073 None:intergenic
TCAAGCCAGGGCATTTGAGA+AGG 0.555651 5:+3775767 MsaT025084.1:CDS
TGCTGGCAAATAATGCATGC+TGG 0.558324 5:-3778896 None:intergenic
GGAACACTGTACCAGCACTT+TGG 0.559044 5:-3775738 None:intergenic
AATTAAGGATTTGAAAGTGA+AGG 0.561224 5:+3773414 MsaT025084.1:CDS
CAATCCAGATTTGCATGCAA+AGG 0.561290 5:-3791515 None:intergenic
CAGTTGATGTACCGCAGTTG+AGG 0.561895 5:+3785159 MsaT025084.1:CDS
GGGGCTCATTGCATGGTACT+GGG 0.563916 5:-3780650 None:intergenic
GGATAATAAACAGGTGCTGA+AGG 0.564496 5:-3772806 None:intergenic
GTCATCAATATTGCAGCTCA+AGG 0.564942 5:+3788609 MsaT025084.1:CDS
ATCATCTGAAGTTGAAAAGG+TGG 0.565196 5:+3789105 MsaT025084.1:CDS
GTTGTTGATGGGAAGAAATG+GGG 0.565480 5:+3773166 MsaT025084.1:CDS
GAAGTTCTGGGAGATTGTGG+AGG 0.566416 5:+3773741 MsaT025084.1:CDS
CTAGGGGAGAGCCAAAGTGC+TGG 0.567038 5:+3775727 MsaT025084.1:intron
ACTTACAAATGTGAATTGCT+TGG 0.568039 5:+3792178 MsaT025084.1:CDS
CAGTTGCTGAATGGATTCGA+GGG 0.568808 5:-3785682 None:intergenic
AGTTGAGATTGAGCTGAAGA+AGG 0.569618 5:+3785436 MsaT025084.1:CDS
ACAATTCTACAAATTCCATA+GGG 0.569821 5:-3772890 None:intergenic
TGATAATGGGGCTCATTGCA+TGG 0.570256 5:-3780657 None:intergenic
GCTGTTCATCACAATATCAC+TGG 0.571306 5:+3773952 MsaT025084.1:CDS
TCCAGACACACAAAAGATGA+TGG 0.571314 5:-3778956 None:intergenic
TTGCATCTTCTAGAATTGCA+AGG 0.571739 5:-3787396 None:intergenic
TCTGAACCAACTTATTGAGA+AGG 0.572121 5:+3791492 MsaT025084.1:CDS
ATGTAGGCTAGTAAAGTGGC+TGG 0.572209 5:+3791838 MsaT025084.1:intron
CAATGTAAAAGTGGGTTGCA+TGG 0.573025 5:+3773478 MsaT025084.1:CDS
ATTCAATGAATTATCTACAC+TGG 0.573102 5:+3774049 MsaT025084.1:CDS
CTTGCCTGTTGATGTAAATG+AGG 0.576021 5:+3792374 MsaT025084.1:CDS
GAAGCTCAGAAATGGGCAGA+AGG 0.578001 5:+3780525 MsaT025084.1:CDS
CCCTAGAAAGAAACAGAAGA+GGG 0.578320 5:+3793483 MsaT025084.1:CDS
GTCTTCGAATCACACGCAGC+AGG 0.578760 5:-3773007 None:intergenic
TATATCAATCAGGCATGGAT+GGG 0.579076 5:+3783445 MsaT025084.1:intron
AAGAGCACTTATAATTTCTG+AGG 0.580027 5:-3790461 None:intergenic
AGAAGGTCCTATGAATCTCA+AGG 0.580730 5:+3785020 MsaT025084.1:CDS
GACGCATTGCAGATAGGTCG+AGG 0.582270 5:+3773671 MsaT025084.1:CDS
GGAGGTTTCCAATTATTCGG+TGG 0.582620 5:-3772914 None:intergenic
ATGGTGATGTTGACAGCAGA+GGG 0.582623 5:+3778633 MsaT025084.1:CDS
TGATAAATGTGACCTTGAGC+TGG 0.582979 5:+3791876 MsaT025084.1:CDS
CCAGCTGACTGGCTCCCACA+CGG 0.584217 5:+3778144 MsaT025084.1:CDS
ATGCGTTGGGAGGAAAGGGC+CGG 0.584917 5:+3785869 MsaT025084.1:CDS
CTGTTCAGCTTTCCTTAATG+CGG 0.587007 5:-3780359 None:intergenic
GTAACAACAGTGATGGTGAA+AGG 0.587180 5:+3772719 None:intergenic
AAGAAGCCATTGGAAAACAT+AGG 0.588399 5:+3788118 MsaT025084.1:CDS
TGTTGATGGGAAGAAATGGG+GGG 0.588740 5:+3773168 MsaT025084.1:CDS
ATGCTGAACATTTCTGTCTG+TGG 0.589048 5:+3790680 MsaT025084.1:CDS
AGCAAGTTCAGTGAAAGTAA+TGG 0.589888 5:-3780272 None:intergenic
GTAAGAGTAAGAGCGATCCA+GGG 0.591679 5:+3773332 MsaT025084.1:CDS
ATATGGACAGCTATCACTTG+CGG 0.594720 5:+3790409 MsaT025084.1:intron
AAGATTGAAACCACCATGGT+AGG 0.595604 5:-3777999 None:intergenic
CATTGCCTACTAACCATGAC+AGG 0.596066 5:+3792996 MsaT025084.1:CDS
TTTGCATCTAGGAATGAAGA+TGG 0.596777 5:+3793532 MsaT025084.1:CDS
GAGTAAGAGCGATCCAGGGG+TGG 0.597004 5:+3773336 MsaT025084.1:CDS
CAATAGAGCACCAGAAACAC+AGG 0.598891 5:-3787316 None:intergenic
TTATATGTAGGCTAGTAAAG+TGG 0.599295 5:+3791834 MsaT025084.1:intron
AAGCTCAGAAATGGGCAGAA+GGG 0.601509 5:+3780526 MsaT025084.1:CDS
TCTTTACAAGTTAAAGTCAG+AGG 0.601985 5:+3783522 MsaT025084.1:CDS
TGATGTAAATGAGGAACTCA+GGG 0.602141 5:+3792383 MsaT025084.1:CDS
ATTGCTCACAAATCTGATCA+CGG 0.602209 5:-3773459 None:intergenic
TGGCTTAGGAGAGCGTTAGA+GGG 0.604851 5:+3787363 MsaT025084.1:CDS
GTATATGAACTTGTAGCGGA+AGG 0.605913 5:+3792345 MsaT025084.1:CDS
GTTATGATAAGGTTGTTGAT+GGG 0.606122 5:+3773155 MsaT025084.1:CDS
AACGGAATTTGCTTCAACGG+CGG 0.606689 5:-3773559 None:intergenic
TAAAAGTGGGTTGCATGGGG+AGG 0.608073 5:+3773483 MsaT025084.1:CDS
TGGTGTCGCCATGCGTTGGG+AGG 0.608679 5:+3785859 MsaT025084.1:CDS
GTTGTACACGGGATACACGC+AGG 0.609044 5:-3792974 None:intergenic
AAGTTCTGGGAGATTGTGGA+GGG 0.610461 5:+3773742 MsaT025084.1:CDS
TGGCATTAGCAAAATACTTG+TGG 0.611106 5:+3791896 MsaT025084.1:CDS
GGCTTAGGAGAGCGTTAGAG+GGG 0.611145 5:+3787364 MsaT025084.1:CDS
AAATTGGAAGAAAAGATGCA+TGG 0.612612 5:+3789129 MsaT025084.1:CDS
TGATGGTGAAAGGAAACCCT+AGG 0.612926 5:+3772729 None:intergenic
ACCCTAGAAAGAAACAGAAG+AGG 0.613699 5:+3793482 MsaT025084.1:CDS
TCACTGGTGTTATGGTACCC+TGG 0.614265 5:+3773968 MsaT025084.1:CDS
TTCCCCAGAGCCTACCATGG+TGG 0.616451 5:+3777989 MsaT025084.1:CDS
CTTCTATACTCTAGAGCTCG+TGG 0.617949 5:+3781420 MsaT025084.1:CDS
ACCTTCAGTTTATGATAATG+GGG 0.620140 5:-3780669 None:intergenic
GTTCTCTACTTGATGATGGA+CGG 0.620504 5:+3786378 MsaT025084.1:CDS
TACAGGCCTTAATTGTGCAG+AGG 0.620572 5:+3778107 MsaT025084.1:intron
GAATTGCTTGGTCATGCACT+GGG 0.620839 5:+3792190 MsaT025084.1:CDS
ATTAACTAGTGGGAAACTTG+AGG 0.620861 5:+3793429 MsaT025084.1:CDS
GTGGCTGGTGTCTATGATCA+AGG 0.621602 5:+3791853 MsaT025084.1:CDS
AAACAATACCAATTTCCCAA+CGG 0.622144 5:-3773577 None:intergenic
ACTGTTCATGGGATAAGCAG+TGG 0.624379 5:+3786422 MsaT025084.1:CDS
AAACTCTGTTCGGAAAGTTG+AGG 0.625374 5:+3786158 MsaT025084.1:CDS
GAACGCCCTTTGATCCCGGA+AGG 0.626539 5:+3792870 MsaT025084.1:CDS
AGAATGATTGCAGAAACATA+GGG 0.627419 5:-3786579 None:intergenic
ACTTGGTGAATTGTATGACT+TGG 0.627476 5:+3779906 MsaT025084.1:CDS
TAAAGTATATGAACTTGTAG+CGG 0.628050 5:+3792341 MsaT025084.1:CDS
ATGGGAAAGAATGTTTAAGG+TGG 0.630279 5:+3793575 MsaT025084.1:CDS
TCTAGATCCAATGCAAAAGG+AGG 0.631627 5:-3772932 None:intergenic
CAGCTCCAAATGTACCGTGT+GGG 0.633288 5:-3778158 None:intergenic
AGAACTCACAGAATCCATCT+CGG 0.634681 5:-3780398 None:intergenic
AGGAGGAGATGGTTTGGACA+GGG 0.639029 5:+3773691 MsaT025084.1:CDS
ATTGCTTACACTCAGGAACG+TGG 0.639938 5:+3789043 MsaT025084.1:intron
ATGTAAAAGTGGGTTGCATG+GGG 0.639965 5:+3773480 MsaT025084.1:CDS
TGAATCGCCTGTGTCTTCGT+CGG 0.640852 5:-3772968 None:intergenic
TATGGTGATGTTGACAGCAG+AGG 0.640879 5:+3778632 MsaT025084.1:CDS
AGGGAAAATTTCATCAACCA+AGG 0.643632 5:+3781479 MsaT025084.1:CDS
TGTTCCTGGTAGTCAAGCCA+GGG 0.643919 5:+3775755 MsaT025084.1:CDS
GGACTAACATCAAAAGACAC+TGG 0.644425 5:+3790438 MsaT025084.1:CDS
CATCTTGTTCTACACTGGAG+TGG 0.645033 5:+3786546 MsaT025084.1:CDS
AGCATTCCAATATATAGCCA+GGG 0.645330 5:-3773985 None:intergenic
GCCCCATTATCATAAACTGA+AGG 0.646102 5:+3780668 MsaT025084.1:CDS
GTGCATCGAAAAGGTCAGGA+AGG 0.647561 5:-3777064 None:intergenic
ACAATTCACCAAGTGAATGA+CGG 0.649852 5:-3779897 None:intergenic
TTAGTAGGCAATGTTGTACA+CGG 0.653018 5:-3792986 None:intergenic
TTGTACACGGGATACACGCA+GGG 0.658389 5:-3792973 None:intergenic
ACTTTCCCCAGAGCCTACCA+TGG 0.658924 5:+3777986 MsaT025084.1:CDS
AGCCGTTTAGAAGAGCAACT+AGG 0.660461 5:+3793608 MsaT025084.1:CDS
CATTCAGCAACTGCTAAAGG+AGG 0.662923 5:+3785692 MsaT025084.1:CDS
TCACTGAACTTGCTACAGAG+TGG 0.665288 5:+3780281 MsaT025084.1:CDS
AAGAATACTCAACAAACCCA+TGG 0.667745 5:+3773887 MsaT025084.1:CDS
TAGTAGGCAATGTTGTACAC+GGG 0.670552 5:-3792985 None:intergenic
ATTGAAAGTACTGGTTGATG+GGG 0.674743 5:+3787335 MsaT025084.1:CDS
TCAGCTCCAAATGTACCGTG+TGG 0.675749 5:-3778159 None:intergenic
TAAGAGTAAGAGCGATCCAG+GGG 0.676576 5:+3773333 MsaT025084.1:CDS
GAAACAGTAACCTCTAAACA+AGG 0.680919 5:-3786602 None:intergenic
GTAAAGGTACGAGCACGAGT+GGG 0.681686 5:+3773305 MsaT025084.1:CDS
ACATATCGGGGACATTTCCG+AGG 0.682927 5:-3778758 None:intergenic
AACCACCATGGTAGGCTCTG+GGG 0.684598 5:-3777991 None:intergenic
AACAGCTGTCTTGTCTCACG+AGG 0.684600 5:+3778203 MsaT025084.1:CDS
TTGGAGCTGATCTCTATAAG+CGG 0.686217 5:+3778172 MsaT025084.1:CDS
TCTTCAGTTCCTACATATCG+GGG 0.686272 5:-3778770 None:intergenic
TTTGTGAGCAATGTAAAAGT+GGG 0.690357 5:+3773470 MsaT025084.1:CDS
GCATTGCAGATAGGTCGAGG+AGG 0.691576 5:+3773674 MsaT025084.1:CDS
AGTTCTGGGAGATTGTGGAG+GGG 0.702191 5:+3773743 MsaT025084.1:CDS
AGTTGCTGAATGGATTCGAG+GGG 0.705208 5:-3785681 None:intergenic
CGTGTTATCAATGTAGTGAG+TGG 0.705989 5:+3792900 MsaT025084.1:CDS
AGATACACCAGATGTTATGG+CGG 0.709983 5:-3786486 None:intergenic
GTGATAGGTGTGATAAAGGG+TGG 0.717925 5:+3773518 MsaT025084.1:CDS
ACTGCTTATCCCATGAACAG+TGG 0.719681 5:-3786420 None:intergenic
TACCAAGATTGAAACCACCA+TGG 0.725006 5:-3778003 None:intergenic
GGTATCCAAGAAGCATCATG+GGG 0.744312 5:+3773375 MsaT025084.1:CDS
TTCCTTAGTAGCCTCAACTG+CGG 0.747253 5:-3785170 None:intergenic
GACATAATATCCTACCAGGG+GGG 0.782419 5:-3790529 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 3772731 3793675 3772731 ID=MsaG025084
Chr5 mRNA 3772731 3793675 3772731 ID=MsaT025084.1;Parent=MsaG025084
Chr5 exon 3772731 3774070 3772731 ID=MsaT025084.1.exon1;Parent=MsaT025084.1
Chr5 CDS 3772731 3774070 3772731 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3775731 3775788 3775731 ID=MsaT025084.1.exon2;Parent=MsaT025084.1
Chr5 CDS 3775731 3775788 3775731 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3777050 3777172 3777050 ID=MsaT025084.1.exon3;Parent=MsaT025084.1
Chr5 CDS 3777050 3777172 3777050 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3777965 3778022 3777965 ID=MsaT025084.1.exon4;Parent=MsaT025084.1
Chr5 CDS 3777965 3778022 3777965 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3778112 3778248 3778112 ID=MsaT025084.1.exon5;Parent=MsaT025084.1
Chr5 CDS 3778112 3778248 3778112 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3778632 3778793 3778632 ID=MsaT025084.1.exon6;Parent=MsaT025084.1
Chr5 CDS 3778632 3778793 3778632 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3778893 3778979 3778893 ID=MsaT025084.1.exon7;Parent=MsaT025084.1
Chr5 CDS 3778893 3778979 3778893 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3779847 3780020 3779847 ID=MsaT025084.1.exon8;Parent=MsaT025084.1
Chr5 CDS 3779847 3780020 3779847 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3780259 3780411 3780259 ID=MsaT025084.1.exon9;Parent=MsaT025084.1
Chr5 CDS 3780259 3780411 3780259 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3780498 3780689 3780498 ID=MsaT025084.1.exon10;Parent=MsaT025084.1
Chr5 CDS 3780498 3780689 3780498 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3780774 3780839 3780774 ID=MsaT025084.1.exon11;Parent=MsaT025084.1
Chr5 CDS 3780774 3780839 3780774 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3781405 3781500 3781405 ID=MsaT025084.1.exon12;Parent=MsaT025084.1
Chr5 CDS 3781405 3781500 3781405 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3783457 3783543 3783457 ID=MsaT025084.1.exon13;Parent=MsaT025084.1
Chr5 CDS 3783457 3783543 3783457 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3784925 3785041 3784925 ID=MsaT025084.1.exon14;Parent=MsaT025084.1
Chr5 CDS 3784925 3785041 3784925 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3785122 3785329 3785122 ID=MsaT025084.1.exon15;Parent=MsaT025084.1
Chr5 CDS 3785122 3785329 3785122 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3785420 3785484 3785420 ID=MsaT025084.1.exon16;Parent=MsaT025084.1
Chr5 CDS 3785420 3785484 3785420 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3785663 3785721 3785663 ID=MsaT025084.1.exon17;Parent=MsaT025084.1
Chr5 CDS 3785663 3785721 3785663 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3785811 3785942 3785811 ID=MsaT025084.1.exon18;Parent=MsaT025084.1
Chr5 CDS 3785811 3785942 3785811 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3786038 3786188 3786038 ID=MsaT025084.1.exon19;Parent=MsaT025084.1
Chr5 CDS 3786038 3786188 3786038 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3786278 3786613 3786278 ID=MsaT025084.1.exon20;Parent=MsaT025084.1
Chr5 CDS 3786278 3786613 3786278 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3787282 3787455 3787282 ID=MsaT025084.1.exon21;Parent=MsaT025084.1
Chr5 CDS 3787282 3787455 3787282 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3788078 3788139 3788078 ID=MsaT025084.1.exon22;Parent=MsaT025084.1
Chr5 CDS 3788078 3788139 3788078 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3788552 3788630 3788552 ID=MsaT025084.1.exon23;Parent=MsaT025084.1
Chr5 CDS 3788552 3788630 3788552 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3789058 3789207 3789058 ID=MsaT025084.1.exon24;Parent=MsaT025084.1
Chr5 CDS 3789058 3789207 3789058 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3789288 3789421 3789288 ID=MsaT025084.1.exon25;Parent=MsaT025084.1
Chr5 CDS 3789288 3789421 3789288 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3790419 3790536 3790419 ID=MsaT025084.1.exon26;Parent=MsaT025084.1
Chr5 CDS 3790419 3790536 3790419 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3790631 3790701 3790631 ID=MsaT025084.1.exon27;Parent=MsaT025084.1
Chr5 CDS 3790631 3790701 3790631 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3791474 3791618 3791474 ID=MsaT025084.1.exon28;Parent=MsaT025084.1
Chr5 CDS 3791474 3791618 3791474 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3791844 3791993 3791844 ID=MsaT025084.1.exon29;Parent=MsaT025084.1
Chr5 CDS 3791844 3791993 3791844 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3792134 3792229 3792134 ID=MsaT025084.1.exon30;Parent=MsaT025084.1
Chr5 CDS 3792134 3792229 3792134 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3792309 3792404 3792309 ID=MsaT025084.1.exon31;Parent=MsaT025084.1
Chr5 CDS 3792309 3792404 3792309 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3792833 3793017 3792833 ID=MsaT025084.1.exon32;Parent=MsaT025084.1
Chr5 CDS 3792833 3793017 3792833 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Chr5 exon 3793429 3793675 3793429 ID=MsaT025084.1.exon33;Parent=MsaT025084.1
Chr5 CDS 3793429 3793675 3793429 ID=cds.MsaT025084.1;Parent=MsaT025084.1
Gene Sequence

>MsaT025084.1

ATGGTGAAAGGAAACCCTAGGTCTGTAGAAAAACGTGTATTAGGTCAAAATCTCCCAATTTCATCTCCAACTATACCTTCAGCACCTGTTTATTATCCAACTGAAGATGAATTCAAAGATCCTTTAGAATTTATTCATAAGATTAGACCTGAAGCTGAACCCTATGGAATTTGTAGAATTGTTCCACCGAATAATTGGAAACCTCCTTTTGCATTGGATCTAGATTCTTTCACTTTTCCGACGAAGACACAGGCGATTCATAAGCTTCAGGTTCGTCCTGCTGCGTGTGATTCGAAGACGTTTGAGCTGGAGTATGGTAGGTTTTTGAGGGATTATTGTGGGAAGAAGGTTAAGAAGAGAGTTATTTTTGAAGGGGAGGATTTAGATTTGTGTAAGGTGTTTAATGGTGTTAAGAGGTTTGGTGGTTATGATAAGGTTGTTGATGGGAAGAAATGGGGGGAGGTTGCAAGGTTTGTGAGGTGTAATGGGAAGATTTCGGATTGTGCTAAGCATGTTTTGTGTCAGTTGTATAGAGAGCATCTTTATGATTATGAGGTTTTTTGCAATAAGTTTAGTAAAGGTACGAGCACGAGTGGGAGTTGTAAGAGTAAGAGCGATCCAGGGGTGGAGAGTTCGGTCAGTTCGGTATCCAAGAAGCATCATGGGGTTGTTGATGATATGAAAATTAAGGATTTGAAAGTGAAGGATCGGAAAGTAAAGGAAGAAAGCCGTGATCAGATTTGTGAGCAATGTAAAAGTGGGTTGCATGGGGAGGTGATGCTATTGTGTGATAGGTGTGATAAAGGGTGGCATATTTATTGTCTTTCACCGCCGTTGAAGCAAATTCCGTTGGGAAATTGGTATTGTTTTAATTGTTTGAGTTCGGATAGGGAGAGCTTTGGTTTTGTGCCGGGGAAGCAATATTCGCTGGAAACTTTCAGACGCATTGCAGATAGGTCGAGGAGGAGATGGTTTGGACAGGGACCTGTTTCAAGGGTGCAAATAGAGAAGAAGTTCTGGGAGATTGTGGAGGGGTCGGTTGGTGAGGTTGAGGTTATGTATGGAAATGATTTGGATACATCTATCTATGGTAGTGGTTTTCCAAATGAAACAAATCAGAAACAGAAACCACAATCTATTGATGATAAGTTATGGCAAGAATACTCAACAAACCCATGGAATTTGAATAACTTGCCTAAATTAAAAGGCTCAATGCTTCGAGCTGTTCATCACAATATCACTGGTGTTATGGTACCCTGGCTATATATTGGAATGCTATTCTCGTCCTTTTGCTGGCATTTTGAGGATCACTGCTTCTATTCAATGAATTATCTACACTGGGGAGAGCCAAAGTGCTGGTACAGTGTTCCTGGTAGTCAAGCCAGGGCATTTGAGAAGGTGATGAAAAGCAGCCTTCCTGACCTTTTCGATGCACAGCCTGATCTGCTTTTTCAGCTTGTTACTATGTTAAACCCATCTGTGTTGCAAGAAAATGGAGTTCCTGTCTATAGCACACTTCAGGAGCCTGGAAATTTTGTTATTACTTTCCCCAGAGCCTACCATGGTGGTTTCAATCTTGGCCTTAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTCCCACACGGTACATTTGGAGCTGATCTCTATAAGCGGTATCACAAAACAGCTGTCTTGTCTCACGAGGAGCTTCTTTGTGTAGTAGCCCAGTATGGTGATGTTGACAGCAGAGGGTCCTCTTATTTGAAAATGGAATTGCTGAAAATATCAGATAGAGAAAAATCTTGGAGGGAGAAACTTTGGAAAAATGGTATCGTTAAGTCTTCTCGTTTATCTCCTCGGAAATGTCCCCGATATGTAGGAACTGAAGATGATCCAGCATGCATTATTTGCCAGCAATATCTCTATCTCTCTGCAGTTGTATGCAGTTGCAGGCCATCATCTTTTGTGTGTCTGGAGCACTGGGAACACCTTTGTGAGTGCAAAACTGCTAAACTTCGTCTTCTCTACCGTCATTCACTTGGTGAATTGTATGACTTGGCGTTTTCTGTTGACAAATATACTTCTGAAGAAAAAGCTGAGAGTAGAAACGTAAAAAGACAGTCTTCATGTCCGAGTGCTTTGACAAAAAAGGTGAATGGTAGCTCCATTACTTTCACTGAACTTGCTACAGAGTGGCTTCTGCAATCTAGTACTATTCTTCAGAATGTTTTTGTGACTGATGCATCTATTACCGCATTAAGGAAAGCTGAACAGTTTCTTTGGGCTGGTTCCGAGATGGATTCTGTTCGGGATATGGTAAAGAGTTTGACCGAAGCTCAGAAATGGGCAGAAGGGATAAAAGATTGTGTGACAAAAATTGAGGTGTGGTCGAGTCGTCAGGATTCAAGTTTAAAGAAAGTTAATTTAGAGTACGTTGAAGAGTTTCTGAGATTTAACCCAGTACCATGCAATGAGCCCCATTATCATAAACTGAAGGAATATGCAGAAGAAGCGAAATTGTTACTTCAGGAGATTGAGACTGCTTTGTCAATGTGCTCCAACATATCTGAGTTGGAACTTCTATACTCTAGAGCTCGTGGCTTGCCCATCTACGTGAAAGAGACTAAAAAATTAAAAGGGAAAATTTCATCAACCAAGGCATGGATGGGTAGTGTCAGAAATTGTATCTCAGCTAGAGATCCTGCTGAATTAGATGTTGATGTTCTTTACAAGTTAAAGTCAGAGATTGCAGATCTTCAAGTTCAACTCCCAGAGATTGATGCACTTCAGAATTTATTAAATCAGGCAGAATCTTGTAGTTCCCAATGTCGTTGTATGTTAGAAGGTCCTATGAATCTCAAGAATGTTGGTTTGCTTCTTAAGGAATGGGACAGTTTTACAGTTGATGTACCGCAGTTGAGGCTACTAAGGAATTACCATTCAGATGCTGTGTCATGGGTTTCTCACTTTAATGATGTTTTAGGGAGAGTTCACAGTCAGGAAGATCAGCATAATTCAGTTGATGAATTGAAGAGCATTCTTGAAGAAGGTTTATCTTTGAAAATTCAAGTTGATGAGTTGCCTGTAGTTGAGATTGAGCTGAAGAAGGCTAGTTGCCGACAGAAAGCTTTGAAGGCACATGATTCTAAGATGCCCCTCGAATCCATTCAGCAACTGCTAAAGGAGGCCGCCATGCTAGAAATTGAGGGAGAGAAACAATTCATCAGTTTGTCTTGTGTGCTTGGTGTCGCCATGCGTTGGGAGGAAAGGGCCGGAGAGATTCTTTCAGTTGAGGCTTCTATTTCTGACTTTGAGGACATGATAAGAGCTTCAGAAAATGTATTTGTTACTCTTGCTTCGCTTGATGATGTTAACAAAGCATTATCAGAAGCTAATTCCTGGTTAAGGAATTCAAAGCCATATTTAGCATCTTCTAATTGTGTGTCAAACTCTGTTCGGAAAGTTGAGGACTTGCAGTTGTTGGTTTCTCAATCAAAGCATCTTAAAGTATCTTTGGAAGAAAGAAGGACACTTGAATTAGTTTTGAATGACTGCAAAAAATGGGAGTGTGAAGCACGTTCTCTACTTGATGATGGACGGTGCTTATTTGAATTGGATACCACTGTTCATGGGATAAGCAGTGGTTTATTGTTTAAAGTGGAAGATTTGATTGCAAGAATCCAGTCCGCCATAACATCTGGTGTATCTCTTGGTTTTGACTTCAGTGACATTTCAAAACTTCAAGCATCTTGTTCTACACTGGAGTGGTGCAAAAGAGCCCTATGTTTCTGCAATCATTCTCCTTGTTTAGAGGATGTTTTGGAAGTTGTGAAAGGCCTATCTCATTCCTGTGTTTCTGGTGCTCTATTGAAAGTACTGGTTGATGGGGTCGAATGGCTTAGGAGAGCGTTAGAGGGGATTTCTAGACCTTGCAATTCTAGAAGATGCAAACTGACTGATATTGAAGATATTCTTGCTGATTATCAGGCTATTAAAATGACCTTTACGGAAGTAAATTGTCAACTTGAAGAAGCCATTGGAAAACATAGGTCGTGGCAAGAGCAAGTGCGACAATTTTTTAGCCCAAGTTATAGGGAACGAACTTGGTCATCAATATTGCAGCTCAAGGAACGTGGAGATACCATTGCCTTTAGTTGCTCAGAACTTGAATTAATATCATCTGAAGTTGAAAAGGTGGAAAATTGGAAGAAAAGATGCATGGATAATATTGGAGCTGTATTCCAAAAAGAAAATTCGCTGCTTCATGCACTGCAGAAGATAAAACAGAATCTAGATAGATCACTATACATATATGGCAAGTTGCAAAATCAAAAGGAACCAAACCTATGTAACTGCTGCTTTGTTGACTCCGAAGATCAGAAATCTCTTACTTGTTCTACTTGTATGGACTGCTATCACTTGCGGTGCATTGGACTAACATCAAAAGACACTGGCCTCAGAAATTATAAGTGCTCTTACTGTGAAATTTTGAAGGGGAAATCCCAATATTCAAAAGGAAGTTCCCCCCTGAGGTTTGAGAAGCATATTGAATTGAACATTCTTGTCAAACTTCTTTCTGATGCTGAACATTTCTGTCTGTGGATTGACGAAAAAGATCTTCTGAACCAACTTATTGAGAAGGCCTTTGCATGCAAATCTGGATTGAGAGAAATAGTGAACCTTTCTTCAGCTTATGTCAACGAAGATATTACCATCATCTCTGAAAAATTGATTATTGCTATAAAGGCTAGTAAAGTGGCTGGTGTCTATGATCAAGGTGATAAATGTGACCTTGAGCTGGCATTAGCAAAATACTTGTGGAAAATTCAAGTCAACATATTATTAAGTGGTGTACAAAAGCCCACTATTGAACAGATTCAGAAACATCTGAAAGAGGGAATGTCTATGGAAATATCACCCAAAGATCACTACATGCTGAAACTTACAAATGTGAATTGCTTGGTCATGCACTGGGTAGAAATAGCCAAAAAGGCATCAAATGATTCAGGAGCACATAGCCTAGATAAAGTATATGAACTTGTAGCGGAAGGTGAAAACTTGCCTGTTGATGTAAATGAGGAACTCAGGATGTTAAGAGCTCGATGCATGCTTTACTGCATTTGTCGAACGCCCTTTGATCCCGGAAGGATGATTGCGTGTTATCAATGTAGTGAGTGGTATCACTTTGATTGTATGAAATTATCATGCACACAAGATATGTACATTTGCCCTGCGTGTATCCCGTGTACAACATTGCCTACTAACCATGACAGATTAACTAGTGGGAAACTTGAGGAGCCAAAAACCCCTTCTCCCAGGCATACAAACCCTAGAAAGAAACAGAAGAGGGATGTGCCGAATCACACTTGCATCATGTTTGCATCTAGGAATGAAGATGGTAGTAATTTTAGGTATCCAAATGGGAAAGAATGTTTAAGGTGGAGAAATCGAAAGCCGTTTAGAAGAGCAACTAGGAGACGTGTTGAACTGCAAAGTCTTTCTCCATTTCTCTATGCATAA
Protein sequence

>MsaT025084.1

MVKGNPRSVEKRVLGQNLPISSPTIPSAPVYYPTEDEFKDPLEFIHKIRPEAEPYGICRIVPPNNWKPPFALDLDSFTFPTKTQAIHKLQVRPAACDSKTFELEYGRFLRDYCGKKVKKRVIFEGEDLDLCKVFNGVKRFGGYDKVVDGKKWGEVARFVRCNGKISDCAKHVLCQLYREHLYDYEVFCNKFSKGTSTSGSCKSKSDPGVESSVSSVSKKHHGVVDDMKIKDLKVKDRKVKEESRDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNCLSSDRESFGFVPGKQYSLETFRRIADRSRRRWFGQGPVSRVQIEKKFWEIVEGSVGEVEVMYGNDLDTSIYGSGFPNETNQKQKPQSIDDKLWQEYSTNPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSQARAFEKVMKSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSTLQEPGNFVITFPRAYHGGFNLGLNCAEAVNFAPADWLPHGTFGADLYKRYHKTAVLSHEELLCVVAQYGDVDSRGSSYLKMELLKISDREKSWREKLWKNGIVKSSRLSPRKCPRYVGTEDDPACIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTAKLRLLYRHSLGELYDLAFSVDKYTSEEKAESRNVKRQSSCPSALTKKVNGSSITFTELATEWLLQSSTILQNVFVTDASITALRKAEQFLWAGSEMDSVRDMVKSLTEAQKWAEGIKDCVTKIEVWSSRQDSSLKKVNLEYVEEFLRFNPVPCNEPHYHKLKEYAEEAKLLLQEIETALSMCSNISELELLYSRARGLPIYVKETKKLKGKISSTKAWMGSVRNCISARDPAELDVDVLYKLKSEIADLQVQLPEIDALQNLLNQAESCSSQCRCMLEGPMNLKNVGLLLKEWDSFTVDVPQLRLLRNYHSDAVSWVSHFNDVLGRVHSQEDQHNSVDELKSILEEGLSLKIQVDELPVVEIELKKASCRQKALKAHDSKMPLESIQQLLKEAAMLEIEGEKQFISLSCVLGVAMRWEERAGEILSVEASISDFEDMIRASENVFVTLASLDDVNKALSEANSWLRNSKPYLASSNCVSNSVRKVEDLQLLVSQSKHLKVSLEERRTLELVLNDCKKWECEARSLLDDGRCLFELDTTVHGISSGLLFKVEDLIARIQSAITSGVSLGFDFSDISKLQASCSTLEWCKRALCFCNHSPCLEDVLEVVKGLSHSCVSGALLKVLVDGVEWLRRALEGISRPCNSRRCKLTDIEDILADYQAIKMTFTEVNCQLEEAIGKHRSWQEQVRQFFSPSYRERTWSSILQLKERGDTIAFSCSELELISSEVEKVENWKKRCMDNIGAVFQKENSLLHALQKIKQNLDRSLYIYGKLQNQKEPNLCNCCFVDSEDQKSLTCSTCMDCYHLRCIGLTSKDTGLRNYKCSYCEILKGKSQYSKGSSPLRFEKHIELNILVKLLSDAEHFCLWIDEKDLLNQLIEKAFACKSGLREIVNLSSAYVNEDITIISEKLIIAIKASKVAGVYDQGDKCDLELALAKYLWKIQVNILLSGVQKPTIEQIQKHLKEGMSMEISPKDHYMLKLTNVNCLVMHWVEIAKKASNDSGAHSLDKVYELVAEGENLPVDVNEELRMLRARCMLYCICRTPFDPGRMIACYQCSEWYHFDCMKLSCTQDMYICPACIPCTTLPTNHDRLTSGKLEEPKTPSPRHTNPRKKQKRDVPNHTCIMFASRNEDGSNFRYPNGKECLRWRNRKPFRRATRRRVELQSLSPFLYA*