AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025113

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025113 MtrunA17_Chr5g0397841 88.050 477 53 2 1 474 1 476 0.0 840
MsaG025113 MtrunA17_Chr7g0238631 61.783 157 60 0 51 207 57 213 1.09e-63 216
MsaG025113 MtrunA17_Chr3g0139671 61.290 155 60 0 53 207 31 185 6.68e-63 219
MsaG025113 MtrunA17_Chr1g0157731 62.581 155 58 0 53 207 37 191 1.49e-61 216
MsaG025113 MtrunA17_Chr3g0117511 52.252 111 53 0 104 214 180 290 1.79e-36 139
MsaG025113 MtrunA17_Chr3g0117511 37.143 105 65 1 46 150 174 277 5.18e-15 77.0
MsaG025113 MtrunA17_Chr4g0058991 54.545 110 50 0 105 214 207 316 2.28e-36 139
MsaG025113 MtrunA17_Chr4g0058991 38.298 94 57 1 56 149 210 302 3.68e-13 71.2
MsaG025113 MtrunA17_Chr5g0429661 54.286 105 48 0 105 209 120 224 2.38e-36 137
MsaG025113 MtrunA17_Chr5g0429661 38.679 106 63 2 44 149 112 215 3.65e-13 70.9
MsaG025113 MtrunA17_Chr7g0228531 52.252 111 52 1 104 214 217 326 3.14e-34 133
MsaG025113 MtrunA17_Chr7g0228531 38.947 95 56 2 56 150 221 313 2.09e-12 68.9
MsaG025113 MtrunA17_Chr4g0053431 44.056 143 80 0 104 246 2 144 6.15e-34 129
MsaG025113 MtrunA17_Chr5g0401731 53.271 107 50 0 104 210 12 118 2.74e-33 128
MsaG025113 MtrunA17_Chr4g0008551 51.456 103 50 0 106 208 37 139 1.57e-32 127
MsaG025113 MtrunA17_Chr6g0454921 50.467 107 53 0 104 210 12 118 3.36e-32 122
MsaG025113 MtrunA17_Chr5g0437321 51.456 103 50 0 102 204 14 116 1.28e-31 122
MsaG025113 MtrunA17_Chr7g0228481 55.000 100 44 1 104 203 217 315 1.38e-30 123
MsaG025113 MtrunA17_Chr7g0228401 43.382 136 52 2 104 214 252 387 2.82e-28 117
MsaG025113 MtrunA17_Chr3g0133601 46.729 107 55 2 104 209 34 139 3.20e-28 111
MsaG025113 MtrunA17_Chr3g0133601 30.189 106 73 1 48 153 30 134 1.28e-11 64.3
MsaG025113 MtrunA17_Chr1g0177901 56.977 86 37 0 118 203 5 90 1.28e-27 109
MsaG025113 MtrunA17_Chr5g0417621 52.041 98 47 0 110 207 137 234 2.41e-27 114
MsaG025113 MtrunA17_Chr4g0042501 50.000 98 49 0 110 207 108 205 8.55e-27 112
MsaG025113 MtrunA17_Chr6g0480581 49.485 97 49 0 110 206 7 103 4.11e-26 106
MsaG025113 MtrunA17_Chr5g0410961 48.039 102 52 1 107 207 14 115 6.14e-26 108
MsaG025113 MtrunA17_Chr3g0115821 49.524 105 50 2 105 207 12 115 2.12e-25 106
MsaG025113 MtrunA17_Chr1g0203411 44.545 110 60 1 103 211 10 119 2.46e-25 105
MsaG025113 MtrunA17_Chr4g0048511 44.860 107 58 1 102 207 10 116 2.63e-25 106
MsaG025113 MtrunA17_Chr2g0281071 45.794 107 57 1 102 207 10 116 6.16e-25 105
MsaG025113 MtrunA17_Chr4g0022911 39.103 156 88 2 105 259 13 162 8.80e-25 103
MsaG025113 MtrunA17_Chr4g0039971 27.508 309 192 8 105 409 13 293 1.18e-24 104
MsaG025113 MtrunA17_Chr3g0131121 39.850 133 77 2 107 236 14 146 1.37e-24 103
MsaG025113 MtrunA17_Chr3g0125801 47.170 106 56 0 110 215 19 124 1.52e-24 103
MsaG025113 MtrunA17_Chr2g0309911 47.115 104 53 2 106 207 11 114 1.88e-24 103
MsaG025113 MtrunA17_Chr4g0055981 47.059 102 53 1 109 209 59 160 2.71e-24 100
MsaG025113 MtrunA17_Chr2g0328771 44.068 118 60 2 105 216 20 137 3.12e-24 102
MsaG025113 MtrunA17_Chr4g0022901 40.441 136 77 2 105 236 13 148 3.39e-24 101
MsaG025113 MtrunA17_Chr1g0193801 47.115 104 54 1 105 207 12 115 4.22e-24 103
MsaG025113 MtrunA17_Chr7g0270891 48.077 104 53 1 105 207 12 115 4.40e-24 103
MsaG025113 MtrunA17_Chr3g0088461 48.077 104 53 1 105 207 22 125 5.04e-24 102
MsaG025113 MtrunA17_Chr5g0440781 46.218 119 60 3 104 218 11 129 5.55e-24 99.0
MsaG025113 MtrunA17_Chr1g0186061 45.378 119 61 3 97 213 12 128 6.13e-24 100
MsaG025113 MtrunA17_Chr1g0186061 38.776 98 56 3 54 149 21 116 1.10e-11 65.1
MsaG025113 MtrunA17_Chr6g0460671 43.243 111 62 1 98 207 89 199 6.75e-24 102
MsaG025113 MtrunA17_Chr6g0460661 44.211 95 53 0 107 201 16 110 7.40e-24 97.8
MsaG025113 MtrunA17_Chr5g0395281 44.231 104 57 1 105 207 12 115 1.19e-23 100
MsaG025113 MtrunA17_Chr1g0193371 46.667 105 53 2 105 207 12 115 1.26e-23 102
MsaG025113 MtrunA17_Chr6g0483051 37.059 170 95 3 41 200 45 212 1.26e-23 104
MsaG025113 MtrunA17_Chr6g0483051 33.775 151 98 2 55 204 16 165 7.36e-20 92.8
MsaG025113 MtrunA17_Chr2g0327821 45.283 106 57 1 104 208 5 110 1.40e-23 99.0
MsaG025113 MtrunA17_Chr1g0180391 47.619 105 54 1 104 207 18 122 1.41e-23 99.0
MsaG025113 MtrunA17_Chr5g0440761 48.571 105 52 2 104 206 11 115 1.45e-23 99.8
MsaG025113 MtrunA17_Chr5g0441141 46.218 119 60 3 104 218 11 129 1.58e-23 100
MsaG025113 MtrunA17_Chr7g0254261 47.273 110 57 1 99 207 80 189 1.79e-23 101
MsaG025113 MtrunA17_Chr5g0441131 43.333 120 64 3 104 219 8 127 1.87e-23 97.4
MsaG025113 MtrunA17_Chr1g0168661 49.038 104 50 2 107 208 23 125 2.15e-23 99.4
MsaG025113 MtrunA17_Chr1g0168661 31.707 123 79 4 38 158 7 126 4.42e-11 63.2
MsaG025113 MtrunA17_Chr3g0099131 43.810 105 58 1 104 207 40 144 2.22e-23 103
MsaG025113 MtrunA17_Chr8g0342541 45.714 105 53 3 106 207 12 115 2.42e-23 100
MsaG025113 MtrunA17_Chr8g0343831 42.593 108 61 1 107 213 10 117 2.73e-23 99.0
MsaG025113 MtrunA17_Chr2g0330041 40.441 136 73 4 106 238 12 142 2.99e-23 101
MsaG025113 MtrunA17_Chr4g0022881 38.710 124 75 1 107 229 14 137 3.01e-23 98.2
MsaG025113 MtrunA17_Chr8g0385321 45.098 102 55 1 107 207 14 115 3.16e-23 100
MsaG025113 MtrunA17_Chr4g0037141 46.078 102 54 1 107 207 14 115 3.16e-23 99.4
MsaG025113 MtrunA17_Chr3g0103281 44.954 109 58 2 104 210 10 118 5.53e-23 99.4
MsaG025113 MtrunA17_Chr8g0342521 46.667 105 52 3 106 207 12 115 6.42e-23 99.8
MsaG025113 MtrunA17_Chr7g0233061 44.737 114 58 2 104 214 177 288 7.02e-23 99.8
MsaG025113 MtrunA17_Chr4g0058631 44.231 104 57 1 105 207 12 115 7.92e-23 99.8
MsaG025113 MtrunA17_Chr4g0032401 44.444 108 59 1 101 207 13 120 8.50e-23 99.0
MsaG025113 MtrunA17_Chr4g0022931 46.154 104 55 1 105 207 13 116 8.54e-23 97.8
MsaG025113 MtrunA17_Chr1g0211161 44.762 105 55 2 105 207 13 116 9.72e-23 96.7
MsaG025113 MtrunA17_Chr3g0080861 43.925 107 59 1 105 210 37 143 1.03e-22 100
MsaG025113 MtrunA17_Chr7g0261281 47.115 104 54 1 105 207 12 115 1.33e-22 97.4
MsaG025113 MtrunA17_Chr3g0117091 45.714 105 54 2 105 207 12 115 1.45e-22 98.6
MsaG025113 MtrunA17_Chr8g0387421 45.370 108 57 2 102 207 8 115 1.56e-22 98.2
MsaG025113 MtrunA17_Chr4g0044421 43.810 105 58 1 104 207 11 115 1.70e-22 94.7
MsaG025113 MtrunA17_Chr1g0209661 42.056 107 61 1 103 208 25 131 1.75e-22 97.8
MsaG025113 MtrunA17_Chr1g0154031 45.370 108 58 1 105 211 76 183 2.43e-22 99.0
MsaG025113 MtrunA17_Chr8g0349261 47.170 106 52 3 105 207 13 117 2.62e-22 97.1
MsaG025113 MtrunA17_Chr3g0121241 44.231 104 57 1 105 207 42 145 4.84e-22 96.3
MsaG025113 MtrunA17_Chr7g0274581 37.013 154 89 4 105 253 12 162 5.18e-22 94.0
MsaG025113 MtrunA17_Chr5g0435101 41.176 102 59 1 107 207 13 114 5.49e-22 94.0
MsaG025113 MtrunA17_Chr8g0346561 42.982 114 64 1 105 217 12 125 5.88e-22 95.9
MsaG025113 MtrunA17_Chr7g0217221 43.519 108 60 1 107 213 14 121 6.81e-22 95.1
MsaG025113 MtrunA17_Chr4g0042671 42.373 118 63 2 105 221 12 125 7.68e-22 97.4
MsaG025113 MtrunA17_Chr6g0470971 42.857 119 67 1 94 211 3 121 9.46e-22 95.1
MsaG025113 MtrunA17_Chr4g0030881 44.037 109 53 2 107 207 9 117 1.45e-21 94.0
MsaG025113 MtrunA17_Chr8g0342481 45.545 101 51 3 110 207 17 116 1.85e-21 96.3
MsaG025113 MtrunA17_Chr2g0323411 44.231 104 57 1 105 207 12 115 1.93e-21 95.1
MsaG025113 MtrunA17_Chr1g0167691 46.154 104 55 1 105 207 12 115 2.07e-21 93.6
MsaG025113 MtrunA17_Chr5g0416341 39.000 100 61 0 109 208 28 127 2.37e-21 96.7
MsaG025113 MtrunA17_Chr5g0416341 35.870 92 58 1 58 149 29 119 2.04e-11 65.9
MsaG025113 MtrunA17_Chr8g0362231 40.404 99 59 0 109 207 24 122 2.39e-21 96.3
MsaG025113 MtrunA17_Chr8g0362231 35.870 92 58 1 58 149 25 115 7.07e-11 64.3
MsaG025113 MtrunA17_Chr5g0397231 45.631 103 54 2 102 202 8 110 2.59e-21 94.7
MsaG025113 MtrunA17_Chr8g0354661 42.991 107 60 1 105 210 37 143 2.72e-21 96.7
MsaG025113 MtrunA17_Chr1g0167661 45.192 104 56 1 105 207 12 115 2.94e-21 93.2
MsaG025113 MtrunA17_Chr5g0417821 43.269 104 58 1 105 207 7 110 3.55e-21 93.6
MsaG025113 MtrunA17_Chr7g0254411 39.669 121 72 1 107 226 14 134 4.14e-21 94.4
MsaG025113 MtrunA17_Chr1g0187761 45.714 105 54 2 105 207 12 115 6.12e-21 92.0
MsaG025113 MtrunA17_Chr8g0334881 47.059 102 52 2 107 206 12 113 7.09e-21 93.2
MsaG025113 MtrunA17_Chr4g0057031 46.602 103 52 2 107 207 14 115 8.11e-21 92.0
MsaG025113 MtrunA17_Chr7g0271241 47.000 100 50 2 105 202 12 110 8.18e-21 94.0
MsaG025113 MtrunA17_Chr1g0151941 46.667 105 53 3 106 207 12 116 1.16e-20 91.3
MsaG025113 MtrunA17_Chr2g0323351 43.689 103 57 1 105 206 12 114 1.29e-20 90.9
MsaG025113 MtrunA17_Chr7g0228891 43.810 105 56 2 105 207 12 115 1.30e-20 91.7
MsaG025113 MtrunA17_Chr7g0217741 43.269 104 58 1 105 207 12 115 1.38e-20 92.4
MsaG025113 MtrunA17_Chr3g0135311 45.283 106 56 2 104 207 11 116 1.46e-20 92.8
MsaG025113 MtrunA17_Chr1g0203441 42.453 106 60 1 107 211 15 120 1.47e-20 91.3
MsaG025113 MtrunA17_Chr4g0060721 37.903 124 68 2 105 223 13 132 1.74e-20 92.4
MsaG025113 MtrunA17_Chr7g0228231 42.308 104 59 1 104 206 13 116 1.85e-20 89.7
MsaG025113 MtrunA17_Chr7g0228231 33.913 115 74 2 54 167 15 128 2.56e-11 63.2
MsaG025113 MtrunA17_Chr7g0240821 39.516 124 72 2 109 231 5 126 2.14e-20 90.1
MsaG025113 MtrunA17_Chr4g0070611 41.346 104 60 1 105 207 12 115 3.63e-20 90.9
MsaG025113 MtrunA17_Chr4g0070641 41.346 104 60 1 105 207 12 115 3.95e-20 87.4
MsaG025113 MtrunA17_Chr6g0452271 43.269 104 57 2 106 207 12 115 5.19e-20 90.9
MsaG025113 MtrunA17_Chr4g0028311 48.148 108 53 3 106 210 12 119 6.86e-20 90.5
MsaG025113 MtrunA17_Chr3g0110351 45.714 105 54 2 105 207 12 115 7.14e-20 90.1
MsaG025113 MtrunA17_Chr1g0192411 44.762 105 57 1 105 208 12 116 7.78e-20 91.3
MsaG025113 MtrunA17_Chr5g0434571 45.714 105 54 2 105 207 48 151 8.79e-20 90.5
MsaG025113 MtrunA17_Chr4g0022891 44.554 101 53 2 107 205 14 113 1.02e-19 88.2
MsaG025113 MtrunA17_Chr2g0293911 40.517 116 66 2 104 218 23 136 1.56e-19 89.4
MsaG025113 MtrunA17_Chr4g0068061 43.269 104 58 1 105 207 12 115 1.57e-19 89.7
MsaG025113 MtrunA17_Chr6g0453471 42.308 104 59 1 105 207 12 115 1.65e-19 89.7
MsaG025113 MtrunA17_Chr6g0487491 42.553 141 63 6 106 228 12 152 2.17e-19 87.8
MsaG025113 MtrunA17_Chr1g0194301 38.938 113 66 2 107 218 35 145 2.44e-19 88.2
MsaG025113 MtrunA17_Chr7g0275911 43.434 99 55 1 110 207 17 115 2.71e-19 87.4
MsaG025113 MtrunA17_Chr5g0434841 41.346 104 60 1 105 207 20 123 3.29e-19 88.6
MsaG025113 MtrunA17_Chr5g0400821 44.340 106 57 2 104 207 11 116 3.34e-19 88.2
MsaG025113 MtrunA17_Chr3g0092401 40.196 102 60 1 107 207 15 116 3.60e-19 88.2
MsaG025113 MtrunA17_Chr1g0152011 43.396 106 58 2 104 207 11 116 3.78e-19 88.6
MsaG025113 MtrunA17_Chr5g0434831 39.423 104 62 1 105 207 7 110 3.85e-19 85.5
MsaG025113 MtrunA17_Chr2g0322521 45.370 108 58 1 105 211 29 136 4.00e-19 89.4
MsaG025113 MtrunA17_Chr4g0013361 41.818 110 62 2 105 212 10 119 5.54e-19 87.4
MsaG025113 MtrunA17_Chr6g0450101 40.385 104 61 1 104 206 13 116 5.82e-19 85.5
MsaG025113 MtrunA17_Chr7g0220341 31.461 178 107 2 107 281 27 192 9.36e-19 86.3
MsaG025113 MtrunA17_Chr2g0311221 45.455 99 52 2 106 202 14 112 1.40e-18 86.7
MsaG025113 MtrunA17_Chr4g0068921 38.793 116 68 2 104 218 23 136 1.92e-18 83.6
MsaG025113 MtrunA17_Chr5g0434931 39.216 102 61 1 107 207 37 138 2.13e-18 85.5
MsaG025113 MtrunA17_Chr1g0194951 43.269 104 58 1 105 207 12 115 2.17e-18 86.7
MsaG025113 MtrunA17_Chr5g0434911 36.036 111 70 1 98 207 14 124 2.32e-18 85.1
MsaG025113 MtrunA17_Chr2g0327351 45.545 101 53 2 104 202 11 111 2.38e-18 85.9
MsaG025113 MtrunA17_Chr6g0453211 40.594 101 51 2 107 202 14 110 2.70e-18 85.5
MsaG025113 MtrunA17_Chr1g0194291 38.053 113 67 2 107 218 23 133 3.32e-18 84.3
MsaG025113 MtrunA17_Chr7g0264641 43.689 103 56 2 107 207 14 116 3.58e-18 84.3
MsaG025113 MtrunA17_Chr8g0360111 39.394 99 59 1 107 204 27 125 9.80e-18 83.2
MsaG025113 MtrunA17_Chr7g0247131 52.941 68 32 0 140 207 14 81 1.28e-17 82.8
MsaG025113 MtrunA17_Chr3g0104501 57.143 63 27 0 96 158 122 184 1.43e-17 81.3
MsaG025113 MtrunA17_Chr7g0228991 39.216 102 61 1 107 207 31 132 1.43e-17 82.8
MsaG025113 MtrunA17_Chr4g0054391 45.455 99 51 3 106 201 12 110 2.55e-17 82.4
MsaG025113 MtrunA17_Chr4g0072751 44.898 98 52 2 107 202 14 111 6.21e-17 82.0
MsaG025113 MtrunA17_Chr4g0046181 51.667 60 29 0 99 158 213 272 1.51e-15 77.0
MsaG025113 MtrunA17_Chr7g0269831 46.154 104 55 1 105 207 12 115 3.00e-15 77.0
MsaG025113 MtrunA17_Chr3g0099141 40.698 86 50 1 104 188 39 124 5.05e-15 72.0
MsaG025113 MtrunA17_Chr5g0425591 43.678 87 47 2 101 185 5 91 5.32e-15 70.5
MsaG025113 MtrunA17_Chr7g0238651 37.113 97 58 1 107 200 7 103 1.26e-14 75.1
MsaG025113 MtrunA17_Chr3g0093811 45.714 70 38 0 140 209 18 87 6.69e-14 72.0
MsaG025113 MtrunA17_Chr7g0233161 56.604 53 23 0 106 158 298 350 1.36e-13 72.0
MsaG025113 MtrunA17_Chr7g0233151 46.552 58 31 0 157 214 1 58 4.98e-13 67.4
MsaG025113 MtrunA17_Chr5g0395221 37.662 77 47 1 105 180 12 88 5.50e-12 61.6
MsaG025113 MtrunA17_Chr7g0274481 39.759 83 49 1 110 192 10 91 6.88e-12 68.2
MsaG025113 MtrunA17_Chr3g0104491 44.828 58 32 0 152 209 12 69 9.04e-12 65.9
MsaG025113 MtrunA17_Chr5g0434901 40.299 67 40 0 139 205 8 74 9.25e-12 62.0
MsaG025113 MtrunA17_Chr2g0323321 34.021 97 63 1 102 197 8 104 1.04e-11 61.6
MsaG025113 MtrunA17_Chr4g0042611 37.662 77 47 1 105 180 12 88 3.54e-11 59.3
MsaG025113 MtrunA17_Chr7g0229101 39.394 66 40 0 140 205 8 73 7.58e-11 61.6
MsaG025113 MtrunA17_Chr8g0342511 39.024 82 46 3 100 178 6 86 7.98e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025113 AT3G09370.1 38.663 419 181 10 28 425 51 414 7.72e-71 233
MsaG025113 AT3G09370.2 38.663 419 181 10 28 425 56 419 8.34e-71 233
MsaG025113 AT3G09370.3 38.663 419 181 10 28 425 64 427 2.00e-70 233
MsaG025113 AT5G02320.3 64.474 152 54 0 56 207 16 167 3.74e-67 223
MsaG025113 AT5G02320.1 64.474 152 54 0 56 207 76 227 4.89e-67 224
MsaG025113 AT5G02320.2 64.474 152 54 0 56 207 76 227 4.89e-67 224
MsaG025113 AT5G11510.5 61.290 155 60 0 53 207 27 181 2.99e-62 216
MsaG025113 AT5G11510.2 61.290 155 60 0 53 207 27 181 3.16e-62 216
MsaG025113 AT5G11510.3 61.290 155 60 0 53 207 27 181 6.64e-62 218
MsaG025113 AT5G11510.1 61.290 155 60 0 53 207 27 181 6.64e-62 218
MsaG025113 AT5G11510.4 61.290 155 60 0 53 207 27 181 6.64e-62 218
MsaG025113 AT4G32730.1 60.645 155 61 0 53 207 33 187 9.88e-61 212
MsaG025113 AT4G32730.5 60.645 155 61 0 53 207 33 187 3.07e-60 213
MsaG025113 AT4G32730.4 60.645 155 61 0 53 207 33 187 3.07e-60 213
MsaG025113 AT4G32730.3 60.645 155 61 0 53 207 33 187 3.07e-60 213
MsaG025113 AT4G32730.2 60.645 155 61 0 53 207 33 187 3.07e-60 213
MsaG025113 AT4G00540.2 52.071 169 73 2 53 213 44 212 1.48e-50 177
MsaG025113 AT4G00540.2 37.255 102 60 2 52 150 100 200 9.41e-13 70.1
MsaG025113 AT4G00540.1 52.071 169 73 2 53 213 42 210 5.69e-50 176
MsaG025113 AT4G00540.1 37.255 102 60 2 52 150 98 198 1.43e-12 69.7
MsaG025113 AT4G18770.1 50.000 134 65 1 97 230 207 338 6.69e-40 149
MsaG025113 AT4G18770.1 38.298 94 57 1 56 149 218 310 7.39e-15 77.0
MsaG025113 AT5G58850.1 50.893 112 55 0 98 209 96 207 5.32e-36 138
MsaG025113 AT5G58850.1 34.848 132 80 3 23 149 68 198 6.30e-13 70.9
MsaG025113 AT3G27785.1 55.238 105 47 0 105 209 187 291 7.61e-35 135
MsaG025113 AT3G27785.1 38.298 94 57 1 56 149 190 282 1.55e-14 75.9
MsaG025113 AT5G40360.1 52.727 110 52 0 107 216 158 267 4.02e-34 132
MsaG025113 AT5G40360.1 34.058 138 84 4 12 149 121 251 1.36e-13 72.4
MsaG025113 AT3G09230.1 52.885 104 49 0 104 207 52 155 6.22e-33 129
MsaG025113 AT3G09230.1 37.755 98 60 1 56 153 56 152 7.37e-13 70.5
MsaG025113 AT5G11050.1 45.000 120 66 0 90 209 88 207 1.90e-32 128
MsaG025113 AT4G37260.1 47.414 116 61 0 102 217 8 123 1.84e-31 123
MsaG025113 AT3G55730.1 50.980 102 50 0 106 207 55 156 6.30e-31 124
MsaG025113 AT5G67300.1 50.962 104 51 0 104 207 3 106 1.84e-30 120
MsaG025113 AT3G50060.1 50.000 108 54 0 104 211 3 110 3.21e-30 119
MsaG025113 AT2G23290.1 50.943 106 52 0 104 209 10 115 4.44e-30 119
MsaG025113 AT2G39880.1 50.000 104 52 0 106 209 49 152 6.45e-30 120
MsaG025113 AT2G25230.1 50.485 103 51 0 104 206 23 125 4.50e-29 114
MsaG025113 AT2G25230.1 36.893 103 62 2 48 150 21 120 6.24e-12 65.9
MsaG025113 AT1G69560.1 50.000 98 49 0 110 207 110 207 2.02e-27 112
MsaG025113 AT1G69560.1 31.405 121 79 2 30 150 85 201 5.76e-11 64.3
MsaG025113 AT1G69560.2 50.000 98 49 0 110 207 126 223 2.05e-27 112
MsaG025113 AT1G69560.2 33.333 102 67 1 49 150 117 217 5.76e-11 64.3
MsaG025113 AT1G26780.1 48.544 103 53 0 105 207 96 198 4.21e-27 110
MsaG025113 AT1G26780.2 48.544 103 53 0 105 207 96 198 8.57e-27 111
MsaG025113 AT1G17950.1 48.485 99 51 0 110 208 8 106 1.23e-26 108
MsaG025113 AT4G33450.1 48.980 98 50 0 110 207 22 119 1.89e-26 107
MsaG025113 AT5G40430.1 45.370 108 58 1 104 211 51 157 3.05e-26 107
MsaG025113 AT5G40430.1 35.922 103 62 3 48 150 49 147 3.17e-11 63.9
MsaG025113 AT3G29020.1 42.857 126 63 1 110 235 68 184 5.02e-26 106
MsaG025113 AT5G16770.4 49.038 104 52 1 105 207 12 115 1.10e-25 107
MsaG025113 AT5G16770.3 49.038 104 52 1 105 207 12 115 1.10e-25 107
MsaG025113 AT5G17800.1 43.200 125 62 2 110 225 96 220 1.10e-25 107
MsaG025113 AT5G16770.1 49.038 104 52 1 105 207 12 115 1.44e-25 107
MsaG025113 AT5G16770.2 49.038 104 52 1 105 207 12 115 1.44e-25 107
MsaG025113 AT3G18100.1 39.161 143 86 1 58 200 498 639 1.45e-25 110
MsaG025113 AT3G18100.1 32.903 155 101 3 55 207 442 595 1.07e-21 99.0
MsaG025113 AT3G18100.1 33.333 102 67 1 48 149 539 639 1.91e-12 70.1
MsaG025113 AT3G18100.1 32.558 129 79 3 88 214 423 545 2.16e-12 70.1
MsaG025113 AT3G18100.3 39.161 143 86 1 58 200 450 591 1.49e-25 110
MsaG025113 AT3G18100.3 33.117 154 100 3 56 207 395 547 1.23e-21 99.0
MsaG025113 AT3G18100.3 33.333 102 67 1 48 149 491 591 2.18e-12 70.1
MsaG025113 AT3G18100.3 32.558 129 79 3 88 214 375 497 2.73e-12 69.7
MsaG025113 AT3G18100.4 39.161 143 86 1 58 200 337 478 1.84e-25 110
MsaG025113 AT3G18100.4 32.903 155 101 3 55 207 281 434 1.58e-21 98.2
MsaG025113 AT3G18100.4 33.333 102 67 1 48 149 378 478 1.89e-12 70.1
MsaG025113 AT3G18100.4 32.558 129 79 3 88 214 262 384 3.84e-12 68.9
MsaG025113 AT3G29020.2 42.857 126 63 1 110 235 70 186 1.88e-25 106
MsaG025113 AT3G18100.2 39.161 143 86 1 58 200 285 426 2.03e-25 110
MsaG025113 AT3G18100.2 33.117 154 100 3 56 207 230 382 1.70e-21 98.2
MsaG025113 AT3G18100.2 33.333 102 67 1 48 149 326 426 2.19e-12 69.7
MsaG025113 AT3G18100.2 32.558 129 79 3 88 214 210 332 4.31e-12 68.9
MsaG025113 AT1G35515.1 48.039 102 52 1 107 207 14 115 3.53e-25 103
MsaG025113 AT1G73410.2 48.039 102 53 0 110 211 9 110 6.48e-25 102
MsaG025113 AT1G73410.1 49.495 99 50 0 110 208 9 107 7.25e-25 103
MsaG025113 AT4G01680.3 48.077 104 53 1 105 207 12 115 1.42e-24 102
MsaG025113 AT5G59780.3 43.243 111 62 1 99 208 2 112 1.87e-24 102
MsaG025113 AT3G02940.2 48.077 104 53 1 105 207 12 115 2.47e-24 103
MsaG025113 AT3G12720.1 44.860 107 56 2 103 207 20 125 2.51e-24 103
MsaG025113 AT5G40330.1 43.396 106 59 1 103 207 10 115 2.90e-24 100
MsaG025113 AT5G40330.1 32.407 108 71 2 54 160 13 119 5.12e-11 62.8
MsaG025113 AT1G22640.1 46.078 102 54 1 107 207 14 115 3.27e-24 102
MsaG025113 AT1G22640.1 35.354 99 62 2 56 153 15 112 2.64e-11 64.3
MsaG025113 AT5G14750.1 43.519 108 60 1 101 207 12 119 3.39e-24 100
MsaG025113 AT5G14750.1 33.333 105 68 2 54 157 17 120 8.57e-11 62.0
MsaG025113 AT4G01680.1 48.077 104 53 1 105 207 12 115 3.76e-24 103
MsaG025113 AT3G02940.1 48.077 104 53 1 105 207 12 115 3.82e-24 103
MsaG025113 AT3G02940.3 48.077 104 53 1 105 207 12 115 3.82e-24 103
MsaG025113 AT3G46130.1 46.602 103 54 1 107 208 11 113 4.22e-24 101
MsaG025113 AT1G56160.1 47.619 105 51 3 106 207 14 117 5.01e-24 102
MsaG025113 AT3G30210.1 40.719 167 91 5 107 267 29 193 5.01e-24 101
MsaG025113 AT5G26660.1 39.394 165 82 6 105 254 12 173 5.55e-24 103
MsaG025113 AT1G34670.1 49.038 104 52 1 105 207 12 115 7.96e-24 103
MsaG025113 AT5G10280.1 47.619 105 52 2 105 207 12 115 8.20e-24 102
MsaG025113 AT3G27920.1 36.905 168 88 4 102 251 11 178 8.81e-24 99.8
MsaG025113 AT4G28110.1 46.078 102 54 1 107 207 14 115 9.79e-24 101
MsaG025113 AT1G74080.1 46.602 103 54 1 105 206 12 114 1.19e-23 102
MsaG025113 AT3G13890.2 46.154 104 54 2 106 207 12 115 1.25e-23 102
MsaG025113 AT5G06100.1 40.833 120 67 2 92 210 22 138 1.48e-23 103
MsaG025113 AT5G39700.1 42.400 125 66 2 110 228 59 183 1.48e-23 98.2
MsaG025113 AT5G65230.1 48.077 104 53 1 105 207 12 115 1.62e-23 101
MsaG025113 AT2G47190.1 42.241 116 64 2 104 218 19 132 1.63e-23 100
MsaG025113 AT4G09460.1 46.078 102 54 1 107 207 14 115 1.77e-23 99.4
MsaG025113 AT1G57560.2 46.667 105 53 2 105 207 12 115 1.80e-23 100
MsaG025113 AT4G21440.1 45.192 104 56 1 105 207 12 115 1.84e-23 101
MsaG025113 AT1G18570.1 46.154 104 55 1 105 207 13 116 1.88e-23 101
MsaG025113 AT3G11440.2 43.925 107 59 1 105 210 41 147 1.93e-23 103
MsaG025113 AT5G06100.5 40.833 120 67 2 92 210 22 138 2.04e-23 103
MsaG025113 AT5G06100.2 40.833 120 67 2 92 210 22 138 2.04e-23 103
MsaG025113 AT5G06100.3 40.833 120 67 2 92 210 22 138 2.04e-23 103
MsaG025113 AT5G06100.4 40.833 120 67 2 92 210 22 138 2.04e-23 103
MsaG025113 AT1G57560.1 46.667 105 53 2 105 207 12 115 2.43e-23 100
MsaG025113 AT4G13480.1 50.459 109 49 3 107 213 8 113 2.44e-23 99.4
MsaG025113 AT3G13540.1 45.455 99 53 1 110 207 28 126 3.47e-23 98.6
MsaG025113 AT3G48920.1 34.518 197 112 5 107 289 20 213 3.97e-23 99.0
MsaG025113 AT1G09540.1 47.619 105 52 2 105 207 12 115 4.50e-23 100
MsaG025113 AT4G05100.1 45.192 104 56 1 105 207 13 116 4.56e-23 100
MsaG025113 AT3G11440.3 43.925 107 59 1 105 210 41 147 4.57e-23 102
MsaG025113 AT3G11440.4 43.925 107 59 1 105 210 41 147 4.57e-23 102
MsaG025113 AT3G11440.1 43.925 107 59 1 105 210 41 147 4.57e-23 102
MsaG025113 AT3G53200.1 44.860 107 58 1 105 210 9 115 4.64e-23 98.2
MsaG025113 AT3G61250.1 46.667 105 53 2 105 207 12 115 7.90e-23 99.0
MsaG025113 AT4G38620.1 45.098 102 55 1 107 207 14 115 7.99e-23 98.6
MsaG025113 AT4G26930.1 45.631 103 55 1 105 206 19 121 9.96e-23 100
MsaG025113 AT2G32460.1 45.370 108 58 1 105 211 18 125 1.02e-22 101
MsaG025113 AT1G74430.1 44.231 104 57 1 105 207 12 115 1.03e-22 97.8
MsaG025113 AT2G32460.2 45.794 107 57 1 105 210 6 112 1.16e-22 100
MsaG025113 AT3G08500.1 47.115 104 54 1 105 207 30 133 1.21e-22 99.4
MsaG025113 AT4G01680.2 43.103 116 53 1 105 207 12 127 1.56e-22 99.0
MsaG025113 AT3G12820.1 48.571 105 50 3 106 207 14 117 1.69e-22 96.7
MsaG025113 AT5G56110.1 45.794 107 56 2 106 210 12 118 1.79e-22 98.2
MsaG025113 AT3G24310.1 47.706 109 53 3 107 213 20 126 1.85e-22 97.1
MsaG025113 AT3G13890.1 42.478 113 54 2 106 207 12 124 1.93e-22 99.0
MsaG025113 AT5G35550.1 39.655 116 69 1 100 214 9 124 2.29e-22 96.7
MsaG025113 AT1G79180.1 45.161 124 63 3 106 227 14 134 3.21e-22 97.1
MsaG025113 AT5G54230.1 45.098 102 55 1 107 207 14 115 3.33e-22 97.4
MsaG025113 AT3G23250.1 45.192 104 56 1 105 207 12 115 4.01e-22 96.7
MsaG025113 AT3G23250.1 34.951 103 61 3 54 153 13 112 5.10e-11 63.9
MsaG025113 AT5G61420.2 48.077 104 53 1 105 207 12 115 4.07e-22 98.2
MsaG025113 AT1G63910.1 45.370 108 57 2 102 207 8 115 6.60e-22 97.4
MsaG025113 AT4G34990.1 45.098 102 55 1 107 207 14 115 8.42e-22 95.5
MsaG025113 AT5G12870.1 44.231 104 57 1 105 207 18 121 8.42e-22 95.5
MsaG025113 AT5G07690.1 48.544 103 52 1 105 206 12 114 1.39e-21 95.9
MsaG025113 AT5G07700.1 47.115 104 54 1 105 207 12 115 1.83e-21 95.9
MsaG025113 AT5G07700.2 47.115 104 54 1 105 207 12 115 1.83e-21 95.9
MsaG025113 AT2G26960.1 31.674 221 128 6 105 308 20 234 1.95e-21 96.7
MsaG025113 AT5G55020.1 44.660 103 56 1 105 206 26 128 2.33e-21 97.4
MsaG025113 AT2G16720.1 43.137 102 57 1 107 207 14 115 2.67e-21 94.0
MsaG025113 AT3G47600.1 40.336 119 62 2 107 220 14 128 3.06e-21 95.1
MsaG025113 AT5G62470.1 43.564 101 57 0 107 207 14 114 3.51e-21 95.1
MsaG025113 AT5G23000.1 49.524 105 50 3 106 207 12 116 6.61e-21 94.0
MsaG025113 AT4G12350.1 44.340 106 55 3 105 207 11 115 9.59e-21 92.8
MsaG025113 AT2G31180.1 46.226 106 55 2 106 209 12 117 9.79e-21 91.7
MsaG025113 AT4G17785.2 42.157 102 58 1 107 207 15 116 1.23e-20 93.6
MsaG025113 AT3G01140.2 44.231 104 57 1 105 207 12 115 1.27e-20 93.2
MsaG025113 AT4G17785.1 42.157 102 58 1 107 207 15 116 1.27e-20 93.6
MsaG025113 AT3G01140.1 44.231 104 57 1 105 207 55 158 1.57e-20 93.6
MsaG025113 AT3G28470.1 43.000 100 56 1 104 202 11 110 1.77e-20 92.4
MsaG025113 AT1G16490.1 43.697 119 64 3 106 222 14 131 1.84e-20 91.7
MsaG025113 AT5G15310.4 43.269 104 58 1 105 207 12 115 2.08e-20 90.9
MsaG025113 AT3G27810.1 38.571 140 74 3 104 242 19 147 2.29e-20 90.1
MsaG025113 AT4G25560.1 45.455 99 53 1 110 207 15 113 2.38e-20 91.3
MsaG025113 AT1G74650.1 44.118 102 56 1 107 207 14 115 2.50e-20 92.4
MsaG025113 AT5G62470.2 43.396 106 51 2 107 207 14 115 3.33e-20 92.4
MsaG025113 AT4G22680.1 45.631 103 53 2 107 207 14 115 3.76e-20 90.5
MsaG025113 AT5G15310.1 43.269 104 58 1 105 207 12 115 3.81e-20 91.7
MsaG025113 AT5G40350.1 34.667 150 95 2 104 252 16 163 4.05e-20 89.0
MsaG025113 AT5G15310.2 43.269 104 58 1 105 207 12 115 4.15e-20 91.3
MsaG025113 AT1G06180.1 44.762 105 55 2 105 207 12 115 4.47e-20 89.7
MsaG025113 AT1G08810.1 41.964 112 56 2 105 211 12 119 4.47e-20 90.5
MsaG025113 AT4G37780.1 46.729 107 47 3 107 207 14 116 4.97e-20 90.9
MsaG025113 AT5G60890.1 43.137 102 57 1 107 207 14 115 5.90e-20 90.5
MsaG025113 AT1G14350.2 37.000 100 63 0 109 208 27 126 5.93e-20 92.4
MsaG025113 AT1G14350.1 37.000 100 63 0 109 208 27 126 5.93e-20 92.4
MsaG025113 AT5G57620.1 47.573 103 52 2 107 207 14 116 6.58e-20 91.3
MsaG025113 AT2G26950.1 38.983 118 62 3 105 216 16 129 7.10e-20 91.7
MsaG025113 AT3G28910.1 43.137 102 57 1 107 207 14 115 7.24e-20 90.9
MsaG025113 AT1G25340.1 41.748 103 59 1 107 208 20 122 9.34e-20 89.7
MsaG025113 AT1G66230.1 45.192 104 56 1 105 207 12 115 1.16e-19 89.4
MsaG025113 AT1G68320.1 38.889 108 65 1 102 208 16 123 1.27e-19 89.4
MsaG025113 AT2G02820.3 36.000 100 64 0 109 208 32 131 1.42e-19 90.1
MsaG025113 AT5G16600.1 46.154 104 55 1 105 207 12 115 1.72e-19 89.7
MsaG025113 AT3G49690.1 45.283 106 56 2 104 207 11 116 1.78e-19 89.4
MsaG025113 AT2G02820.1 36.000 100 64 0 109 208 32 131 2.42e-19 90.9
MsaG025113 AT2G02820.2 36.000 100 64 0 109 208 32 131 2.45e-19 90.9
MsaG025113 AT5G65790.1 44.340 106 57 2 104 207 11 116 2.68e-19 89.7
MsaG025113 AT3G60460.1 40.708 113 65 2 96 206 2 114 2.94e-19 88.6
MsaG025113 AT1G25340.2 41.176 102 56 1 107 208 20 117 3.37e-19 88.2
MsaG025113 AT5G14340.1 41.905 105 58 2 105 207 24 127 3.71e-19 87.8
MsaG025113 AT5G52600.1 42.056 107 60 2 106 210 12 118 3.74e-19 85.9
MsaG025113 AT1G48000.1 39.091 110 64 2 110 218 37 144 3.76e-19 87.0
MsaG025113 AT1G25340.3 41.176 102 56 1 107 208 20 117 4.46e-19 88.2
MsaG025113 AT3G12820.2 55.882 68 30 0 140 207 2 69 4.64e-19 85.5
MsaG025113 AT3G01530.1 39.130 115 69 1 98 211 18 132 6.84e-19 85.5
MsaG025113 AT1G18710.1 39.623 106 63 1 105 209 12 117 9.92e-19 86.3
MsaG025113 AT5G26660.2 36.424 151 70 5 117 254 5 142 1.36e-18 87.0
MsaG025113 AT3G62610.1 43.269 104 58 1 105 207 12 115 1.55e-18 87.0
MsaG025113 AT5G49330.1 44.231 104 57 1 105 207 12 115 2.71e-18 86.3
MsaG025113 AT1G66370.1 40.385 104 61 1 105 207 8 111 2.86e-18 84.7
MsaG025113 AT2G36890.1 42.623 122 64 4 106 221 12 133 3.58e-18 85.5
MsaG025113 AT5G62320.1 40.708 113 55 3 105 207 13 123 4.33e-18 84.0
MsaG025113 AT5G14750.3 48.529 68 35 0 140 207 18 85 4.58e-18 82.0
MsaG025113 AT2G36890.2 42.623 122 64 4 106 221 53 174 5.14e-18 85.5
MsaG025113 AT5G35550.2 48.000 75 39 0 140 214 53 127 5.65e-18 84.0
MsaG025113 AT3G53200.2 50.704 71 35 0 140 210 12 82 6.18e-18 82.8
MsaG025113 AT5G49620.1 38.793 116 68 2 104 218 25 138 6.79e-18 84.7
MsaG025113 AT1G79180.2 35.032 157 64 3 106 227 14 167 1.11e-17 84.3
MsaG025113 AT1G66380.1 40.741 108 63 1 101 207 4 111 2.11e-17 79.3
MsaG025113 AT2G47460.1 43.269 104 57 2 106 207 12 115 3.12e-17 83.6
MsaG025113 AT3G06490.1 37.931 116 69 2 104 218 18 131 5.37e-17 82.4
MsaG025113 AT3G47600.2 45.679 81 44 0 140 220 42 122 5.41e-17 82.4
MsaG025113 AT1G56650.1 40.741 108 63 1 101 207 4 111 6.53e-17 80.9
MsaG025113 AT5G52260.1 44.000 100 53 2 110 207 17 115 1.85e-16 79.7
MsaG025113 AT5G59780.2 47.826 69 36 0 140 208 23 91 3.39e-16 77.8
MsaG025113 AT3G46130.3 47.826 69 36 0 140 208 13 81 5.34e-16 77.4
MsaG025113 AT1G66390.1 40.741 108 63 1 101 207 4 111 5.47e-16 78.2
MsaG025113 AT3G46130.4 47.826 69 36 0 140 208 23 91 6.25e-16 77.8
MsaG025113 AT2G13960.1 52.542 59 28 0 55 113 75 133 3.43e-15 73.2
MsaG025113 AT2G13960.1 48.333 60 31 0 106 165 74 133 7.71e-11 60.8
MsaG025113 AT3G27810.2 39.806 103 51 2 140 242 7 98 3.65e-15 73.9
MsaG025113 AT2G13960.2 53.448 58 27 0 56 113 41 98 4.97e-15 71.6
MsaG025113 AT2G13960.2 49.153 59 30 0 107 165 40 98 8.86e-12 62.4
MsaG025113 AT5G40350.2 34.513 113 72 1 140 252 8 118 7.02e-15 72.8
MsaG025113 AT5G49620.2 34.615 130 68 3 104 218 25 152 1.11e-14 75.5
MsaG025113 AT2G37630.1 37.113 97 58 1 107 200 4 100 3.56e-14 74.3
MsaG025113 AT5G14750.4 45.614 57 31 0 151 207 2 58 8.81e-13 66.2
MsaG025113 AT5G14750.2 45.614 57 31 0 151 207 2 58 8.81e-13 66.2
MsaG025113 AT1G22640.3 49.123 57 29 0 151 207 2 58 3.99e-12 65.9
MsaG025113 AT3G23250.2 52.632 57 27 0 151 207 2 58 6.28e-12 65.9
MsaG025113 AT1G66380.3 45.588 68 37 0 140 207 11 78 6.41e-12 62.4
MsaG025113 AT1G09770.1 39.759 83 49 1 110 192 10 91 1.36e-11 67.4
MsaG025113 AT1G14350.3 32.143 84 44 1 125 208 13 83 1.52e-11 66.6
MsaG025113 AT1G14350.4 32.143 84 44 1 125 208 13 83 1.52e-11 66.6

Find 97 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTTACTGCCATATATT+TGG 0.169401 5:-4074669 None:intergenic
TCGCCATTTGGGAAAATTAT+AGG 0.193856 5:-4075514 None:intergenic
CTCTTTGAGCTACTCAAAAT+TGG 0.226900 5:+4075590 MsaT025113.1:CDS
AAGTTTCTTAGCACCGATTC+TGG 0.231780 5:-4075672 None:intergenic
GAGCTGAAGGATTTACAATT+TGG 0.232675 5:+4072994 MsaT025113.1:CDS
CCTAAAGCAGGATGTGTAAT+TGG 0.235963 5:+4075810 MsaT025113.1:CDS
ATTCAACCAGTTACTTTGTT+TGG 0.258608 5:-4075217 None:intergenic
AGAACATTCCTTCTATTATA+AGG 0.263641 5:+4075709 MsaT025113.1:CDS
CATCATTCCATGGAATTTCT+AGG 0.264210 5:-4075876 None:intergenic
CTTTCTTACTAGCTCAATTA+AGG 0.277662 5:-4074173 None:intergenic
ACCAAATATATGGCAGTAAA+TGG 0.297606 5:+4074668 MsaT025113.1:CDS
CCAATTACACATCCTGCTTT+AGG 0.299396 5:-4075810 None:intergenic
ATTGAGCTAGTAAGAAAGTA+TGG 0.304423 5:+4074178 MsaT025113.1:CDS
GTCCCAAACACCTTCTAAAA+TGG 0.308159 5:+4075776 MsaT025113.1:CDS
GGATATGCATGCAACAAATA+TGG 0.316812 5:+4075455 MsaT025113.1:CDS
AAGAGAAACCTTTCGCCATT+TGG 0.330050 5:-4075526 None:intergenic
ACAGATTCAAAGTTTATTGC+TGG 0.344818 5:+4075549 MsaT025113.1:CDS
TTTCTCCCAAACAAAGTAAC+TGG 0.348007 5:+4075211 MsaT025113.1:CDS
GCTCACTACTACCAAATATA+TGG 0.350001 5:+4074658 MsaT025113.1:CDS
AGAGAAACCTTTCGCCATTT+GGG 0.351659 5:-4075525 None:intergenic
GTAACTGTTTCCATCTCATT+TGG 0.352658 5:-4075375 None:intergenic
TGAAGCAAGTCTCGATGATT+TGG 0.354497 5:-4073021 None:intergenic
TTCAACCAGTTACTTTGTTT+GGG 0.356118 5:-4075216 None:intergenic
ACAAGTGTCACTATTGCAAT+TGG 0.361751 5:-4073061 None:intergenic
TTTCGAATAAACACTCTAGT+TGG 0.364940 5:-4075258 None:intergenic
GCTGAAGATCAAAGTTTAGT+TGG 0.373736 5:+4075183 MsaT025113.1:CDS
AAGAAGAGAAATGTTGGAAA+TGG 0.376076 5:+4072966 None:intergenic
TTTACAGCTGCATACTTCCC+TGG 0.377549 5:+4073955 MsaT025113.1:intron
CTGGAATCATCCCTTGCTAC+AGG 0.380750 5:+4073087 MsaT025113.1:CDS
ATGCTTCCGTAGAGGAATTT+CGG 0.382073 5:+4075280 MsaT025113.1:CDS
GAAATTGCAAGGGTTCTTCC+TGG 0.388868 5:+4074694 MsaT025113.1:CDS
TCATGCAGTGCTGACAAATA+TGG 0.415006 5:+4075750 MsaT025113.1:CDS
TATTAGAGAAGAGCAGAAAC+TGG 0.419411 5:-4075136 None:intergenic
AGTTTCTTAGCACCGATTCT+GGG 0.426239 5:-4075671 None:intergenic
GTATCAGATAAGTACCTTCC+AGG 0.429985 5:-4074712 None:intergenic
GGGTGCTTGGACGGAGGAGG+AGG 0.459044 5:+4074624 MsaT025113.1:CDS
AATCCATGCCAGGTCGTATC+GGG 0.459490 5:+4074227 MsaT025113.1:CDS
TTCGAATAAACACTCTAGTT+GGG 0.460878 5:-4075257 None:intergenic
CGTGGCAGCTCCTAGGGCCT+CGG 0.462527 5:+4075323 MsaT025113.1:CDS
CATAGCATTTCATCATTCCA+TGG 0.466711 5:-4075886 None:intergenic
AGATGCATGATGGAAGCATC+TGG 0.475066 5:+4073635 MsaT025113.1:CDS
TCAGCACTGCATGACTTCCT+AGG 0.479875 5:-4075741 None:intergenic
AGAAATGTTGGAAATGGAAA+AGG 0.480080 5:+4072972 None:intergenic
ATGCTTCCATCGCTGGCAAA+AGG 0.480207 5:+4073993 MsaT025113.1:CDS
AATAAAACCAGCACATGGTT+CGG 0.485028 5:+4075155 MsaT025113.1:CDS
ACATTGAATGCTTCCATCGC+TGG 0.487314 5:+4073986 MsaT025113.1:CDS
ATTCCTTCCTAGAAATTCCA+TGG 0.492413 5:+4075869 MsaT025113.1:CDS
AATAGAAGGAATGTTCTCAT+AGG 0.496498 5:-4075703 None:intergenic
TTACAGCTGCATACTTCCCT+GGG 0.497263 5:+4073956 MsaT025113.1:intron
GAAAGTATGGTTTCAAGAGA+TGG 0.502613 5:+4074191 MsaT025113.1:CDS
CAAGTGTCACTATTGCAATT+GGG 0.513710 5:-4073060 None:intergenic
ATGGAATTTCTAGGAAGGAA+TGG 0.513874 5:-4075867 None:intergenic
ATGTATTTATCTGCGAAGGT+AGG 0.514030 5:-4075420 None:intergenic
AGAAGAGCAGAAACTGGAAG+TGG 0.515412 5:-4075130 None:intergenic
GGAAGCATCTGGAAAAGTAT+AGG 0.516036 5:+4073646 MsaT025113.1:CDS
CTTCCCGATACGACCTGGCA+TGG 0.518638 5:-4074230 None:intergenic
AAGTAACAGTACTGGAAGAA+AGG 0.519260 5:-4075485 None:intergenic
AAATCCATGCCAGGTCGTAT+CGG 0.522451 5:+4074226 MsaT025113.1:CDS
TGTATTTATCTGCGAAGGTA+GGG 0.525550 5:-4075419 None:intergenic
GGTCAATTTACCAAATGAGA+TGG 0.526258 5:+4075365 MsaT025113.1:CDS
TAAATACATGAACTCATCGT+TGG 0.526619 5:+4075434 MsaT025113.1:CDS
GAAGGAATGGAACAAATCCT+TGG 0.526705 5:-4075854 None:intergenic
GCTTTAACCGAACCATGTGC+TGG 0.527242 5:-4075162 None:intergenic
ACATCCATGTCACATCTAGT+AGG 0.527575 5:-4075105 None:intergenic
GAGGAAAGTTCAAGTTGGAA+TGG 0.528710 5:+4075623 MsaT025113.1:CDS
CATTCAATGTCTGTTCGCCC+AGG 0.528988 5:-4073973 None:intergenic
TTATAAGGAAAAGATCTCCT+AGG 0.534381 5:+4075724 MsaT025113.1:CDS
AAGCAACGTGAGCCCAGAAT+CGG 0.535475 5:+4075659 MsaT025113.1:CDS
GGCCTCGTAAGTAACAGTAC+TGG 0.541786 5:-4075493 None:intergenic
TTTAATGATTCAGGAGGATG+AGG 0.543461 5:+4074150 MsaT025113.1:intron
AAAGGGTGCTTGGACGGAGG+AGG 0.550944 5:+4074621 MsaT025113.1:CDS
CATGAGAGGAAAGTTCAAGT+TGG 0.553845 5:+4075618 MsaT025113.1:CDS
GTAAATGGTCAGAAATTGCA+AGG 0.561504 5:+4074683 MsaT025113.1:CDS
TTTATTGCGAAATCCATGCC+AGG 0.564481 5:+4074217 MsaT025113.1:CDS
CTGCGAAGGTAGGGTTGGCA+TGG 0.567546 5:-4075410 None:intergenic
GCTATCACAACTCCTAAAGC+AGG 0.569904 5:+4075798 MsaT025113.1:CDS
GTTCATGTATTTATCTGCGA+AGG 0.570468 5:-4075424 None:intergenic
GAGATAGTCAAGATGCATGA+TGG 0.571639 5:+4073625 MsaT025113.1:CDS
CGGAATCTGGACAGAAGAAG+AGG 0.572625 5:+4073341 MsaT025113.1:CDS
CATTGCTTCCCGATACGACC+TGG 0.574325 5:-4074235 None:intergenic
TTGCAAGGGTTCTTCCTGGA+AGG 0.579944 5:+4074698 MsaT025113.1:CDS
GGAAATGGAAAAGGAGCTGA+AGG 0.585968 5:+4072981 MsaT025113.1:CDS
ATCAGACCGAAATTCCTCTA+CGG 0.589229 5:-4075286 None:intergenic
TTTATCTGCGAAGGTAGGGT+TGG 0.592406 5:-4075415 None:intergenic
TGGAATCATCCCTTGCTACA+GGG 0.594296 5:+4073088 MsaT025113.1:CDS
TCGGGAAGCAATGTCGAGAG+AGG 0.597044 5:+4074245 MsaT025113.1:CDS
TTCCAGTACTGTTACTTACG+AGG 0.600409 5:+4075491 MsaT025113.1:CDS
AAGAAACTTACCCTGTAGCA+AGG 0.603097 5:-4073098 None:intergenic
ATTCCATGGAATTTCTAGGA+AGG 0.603209 5:-4075872 None:intergenic
CAAAATTGGCTAATCATGAG+AGG 0.603609 5:+4075604 MsaT025113.1:CDS
ATTCAATGTCTGTTCGCCCA+GGG 0.615954 5:-4073972 None:intergenic
GATAATTTAAAACTCAACCA+AGG 0.617456 5:+4075837 MsaT025113.1:CDS
TATTCGAAATGCTTCCGTAG+AGG 0.625592 5:+4075272 MsaT025113.1:CDS
AGAAACTTACCCTGTAGCAA+GGG 0.640701 5:-4073097 None:intergenic
ATCACCTACTAGATGTGACA+TGG 0.666242 5:+4075101 MsaT025113.1:CDS
TCTCTAATAAAACCAGCACA+TGG 0.683247 5:+4075150 MsaT025113.1:CDS
TAAATGGTCAGAAATTGCAA+GGG 0.701805 5:+4074684 MsaT025113.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 4072976 4075896 4072976 ID=MsaG025113
Chr5 mRNA 4072976 4075896 4072976 ID=MsaT025113.1;Parent=MsaG025113
Chr5 exon 4072976 4073109 4072976 ID=MsaT025113.1.exon1;Parent=MsaT025113.1
Chr5 CDS 4072976 4073109 4072976 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4073311 4073362 4073311 ID=MsaT025113.1.exon2;Parent=MsaT025113.1
Chr5 CDS 4073311 4073362 4073311 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4073610 4073667 4073610 ID=MsaT025113.1.exon3;Parent=MsaT025113.1
Chr5 CDS 4073610 4073667 4073610 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4073962 4074056 4073962 ID=MsaT025113.1.exon4;Parent=MsaT025113.1
Chr5 CDS 4073962 4074056 4073962 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4074163 4074266 4074163 ID=MsaT025113.1.exon5;Parent=MsaT025113.1
Chr5 CDS 4074163 4074266 4074163 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4074591 4074719 4074591 ID=MsaT025113.1.exon6;Parent=MsaT025113.1
Chr5 CDS 4074591 4074719 4074591 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Chr5 exon 4075044 4075896 4075044 ID=MsaT025113.1.exon7;Parent=MsaT025113.1
Chr5 CDS 4075044 4075896 4075044 ID=cds.MsaT025113.1;Parent=MsaT025113.1
Gene Sequence

>MsaT025113.1

ATGTTGGAAATGGAAAAGGAGCTGAAGGATTTACAATTTGGTTCACCAAATCATCGAGACTTGCTTCATTTATGTCTCTCTTCACCCAATTGCAATAGTGACACTTGTTTTCTGGAATCATCCCTTGCTACAGGGAAAATAAAATCGCAAATTAGCTCGAAAAACGGAATCTGGACAGAAGAAGAGGATAATCTTTTGATTGAGATAGTCAAGATGCATGATGGAAGCATCTGGAAAAGTATAGCTGCATACTTCCCTGGGCGAACAGACATTGAATGCTTCCATCGCTGGCAAAAGGTTTCGAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGAGGATGAGGCCTTAATTGAGCTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTTATTGCGAAATCCATGCCAGGTCGTATCGGGAAGCAATGTCGAGAGAGGTGGCATAATAACCTTGATCCCGCTATAAAAAAGGGTGCTTGGACGGAGGAGGAGGAGTCAATACTTGCTCACTACTACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCACTGAAAAAGAAGTCATCGGCATCACCTACTAGATGTGACATGGATGTTTCCACTTCCAGTTTCTGCTCTTCTCTAATAAAACCAGCACATGGTTCGGTTAAAGCTGAAGATCAAAGTTTAGTTGGAATAGTTTCTCCCAAACAAAGTAACTGGTTGAATCACAATGCTGATAGCTTCCCAACTAGAGTGTTTATTCGAAATGCTTCCGTAGAGGAATTTCGGTCTGATAAAAACATTTTTGGCGTGGCAGCTCCTAGGGCCTCGGAAAAAAGTGAAAGAAGATTGGTCAATTTACCAAATGAGATGGAAACAGTTACATGCTTCAAAGACCATGCCAACCCTACCTTCGCAGATAAATACATGAACTCATCGTTGGATATGCATGCAACAAATATGGATTGTTTCCTTTCTTCCAGTACTGTTACTTACGAGGCCTATAATTTTCCCAAATGGCGAAAGGTTTCTCTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCTCTTTGAGCTACTCAAAATTGGCTAATCATGAGAGGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCAACGTGAGCCCAGAATCGGTGCTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGATCTCCTAGGAAGTCATGCAGTGCTGACAAATATGGCAAGTCCCAAACACCTTCTAAAATGGCTATCACAACTCCTAAAGCAGGATGTGTAATTGGTTTCGATAATTTAAAACTCAACCAAGGATTTGTTCCATTCCTTCCTAGAAATTCCATGGAATGA
Protein sequence

>MsaT025113.1

MLEMEKELKDLQFGSPNHRDLLHLCLSSPNCNSDTCFLESSLATGKIKSQISSKNGIWTEEEDNLLIEIVKMHDGSIWKSIAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNNLDPAIKKGAWTEEEESILAHYYQIYGSKWSEIARVLPGRSDNAIKNHWNSSLKKKSSASPTRCDMDVSTSSFCSSLIKPAHGSVKAEDQSLVGIVSPKQSNWLNHNADSFPTRVFIRNASVEEFRSDKNIFGVAAPRASEKSERRLVNLPNEMETVTCFKDHANPTFADKYMNSSLDMHATNMDCFLSSSTVTYEAYNFPKWRKVSLTDSKFIAGNESDSSSLSYSKLANHERKVQVGMESNNKSNVSPESVLRNLAMTYENIPSIIRKRSPRKSCSADKYGKSQTPSKMAITTPKAGCVIGFDNLKLNQGFVPFLPRNSME*