AlfalfaGEDB | MsaG025337

M. sativa ssp. caerulea / MsaG025337

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009787 GO:0009789 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1903506 GO:1905957 GO:1905959 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025337	TKS10616.1	83.562	73	12	0	1	73	1	73	1.38e-36	135

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025337	sp\|O49697\|NAC71_ARATH	86.792	53	7	0	1	53	1	53	6.94e-28	105

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025337	tr\|A0A4V6AAC5\|A0A4V6AAC5_POPAL	83.562	73	12	0	1	73	1	73	6.57e-37	135

TFs/TRs:

Gene ID	Type	Classification
MsaG025337	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000681	MsaG025337	0.860912	2.922530e-63	2.352384e-60
MsaG001374	MsaG025337	0.804930	2.881016e-49	4.360644e-47
MsaG002298	MsaG025337	0.842887	3.661174e-58	1.566384e-55
MsaG004099	MsaG025337	0.821064	8.646656e-53	1.956061e-50
MsaG004155	MsaG025337	0.850793	2.573489e-60	1.433441e-57
MsaG004329	MsaG025337	0.800253	2.627407e-48	3.572693e-46
MsaG005194	MsaG025337	0.818448	3.401935e-52	7.183174e-50
MsaG005545	MsaG025337	0.811355	1.251081e-50	2.208409e-48
MsaG006548	MsaG025337	0.815584	1.486122e-51	2.915546e-49
MsaG008589	MsaG025337	0.803314	6.223868e-49	9.074228e-47
MsaG012592	MsaG025337	0.810423	1.986803e-50	3.428205e-48
MsaG012636	MsaG025337	0.803061	7.018866e-49	1.017349e-46
MsaG014159	MsaG025337	0.800093	2.830433e-48	3.834917e-46
MsaG014242	MsaG025337	0.822411	4.234963e-53	9.930169e-51
MsaG015237	MsaG025337	0.810612	1.809558e-50	3.136639e-48
MsaG015918	MsaG025337	0.802740	8.169534e-49	1.175419e-46
MsaG016118	MsaG025337	0.811375	1.239245e-50	2.188524e-48
MsaG016159	MsaG025337	0.828235	1.799770e-54	4.954239e-52
MsaG016179	MsaG025337	0.837416	9.658887e-57	3.479715e-54
MsaG016384	MsaG025337	0.812915	5.737578e-51	1.052593e-48
MsaG017022	MsaG025337	0.828467	1.583744e-54	4.388326e-52
MsaG019298	MsaG025337	0.820929	9.287004e-53	2.093393e-50
MsaG019507	MsaG025337	0.823700	2.126745e-53	5.163923e-51
MsaG019606	MsaG025337	0.813380	4.540878e-51	8.428053e-49
MsaG020697	MsaG025337	0.802753	8.119976e-49	1.168649e-46
MsaG020771	MsaG025337	0.807004	1.060058e-49	1.684545e-47
MsaG021888	MsaG025337	0.803389	6.006680e-49	8.772822e-47
MsaG022880	MsaG025337	0.837375	9.893997e-57	3.559781e-54
MsaG023078	MsaG025337	0.826751	4.069256e-54	1.074569e-51
MsaG024877	MsaG025337	0.826651	4.299502e-54	1.132174e-51
MsaG025337	MsaG025448	0.812959	5.613781e-51	1.030986e-48
MsaG025337	MsaG025985	0.805727	1.964599e-49	3.029306e-47
MsaG025337	MsaG027759	0.802318	9.971890e-49	1.421011e-46
MsaG025337	MsaG028585	0.812235	8.067901e-51	1.455198e-48
MsaG025337	MsaG028762	0.821599	6.515099e-53	1.494879e-50
MsaG025337	MsaG029029	0.811033	1.468513e-50	2.571831e-48
MsaG025337	MsaG029076	0.846487	3.965313e-59	1.908600e-56
MsaG025337	MsaG029502	0.804894	2.931378e-49	4.433210e-47
MsaG025337	MsaG030451	0.837144	1.132680e-56	4.046759e-54
MsaG025337	MsaG030455	0.843088	3.238702e-58	1.394585e-55
MsaG025337	MsaG031527	0.847229	2.490684e-59	1.229101e-56
MsaG025337	MsaG032102	0.834532	5.163067e-56	1.705427e-53
MsaG025337	MsaG032564	0.826889	3.773230e-54	1.000221e-51
MsaG025337	MsaG032713	0.854568	2.178300e-61	1.385770e-58
MsaG025337	MsaG033412	0.802114	1.097999e-48	1.557282e-46
MsaG025337	MsaG034018	0.800230	2.655730e-48	3.609313e-46
MsaG025337	MsaG035263	0.848958	8.343917e-60	4.364303e-57
MsaG025337	MsaG039175	0.801950	1.186359e-48	1.676363e-46
MsaG025337	MsaG040750	0.817202	6.481769e-52	1.325403e-49
MsaG025337	MsaG042534	0.800422	2.427891e-48	3.314142e-46
MsaG025337	MsaG044115	0.831299	3.256625e-55	9.782492e-53
MsaG025337	MsaG044865	0.842500	4.632781e-58	1.957737e-55
MsaG025337	MsaG045052	0.807586	7.993343e-50	1.287887e-47
MsaG025337	MsaG045606	0.800271	2.605568e-48	3.544429e-46
MsaG025337	MsaG045939	0.807819	7.133466e-50	1.155851e-47
MsaG025337	MsaG046005	0.817754	4.873522e-52	1.010767e-49
MsaG025337	MsaG046355	0.801547	1.433703e-48	2.007409e-46
MsaG025337	MsaG046438	0.816514	9.233030e-52	1.854753e-49
MsaG025337	MsaG046712	0.816662	8.555178e-52	1.725120e-49
MsaG025337	MsaG046828	0.806470	1.372759e-49	2.154301e-47
MsaG025337	MsaG046830	0.826367	5.020810e-54	1.311707e-51
MsaG025337	MsaG046974	0.827836	2.243286e-54	6.106548e-52
MsaG025337	MsaG002665	0.822239	4.640624e-53	1.083104e-50
MsaG025337	MsaG000822	0.829596	8.460514e-55	2.420436e-52
MsaG025337	MsaG009146	0.810908	1.562312e-50	2.727706e-48
MsaG025337	MsaG007963	0.809673	2.877300e-50	4.874902e-48
MsaG025337	MsaG008774	0.806702	1.227510e-49	1.936832e-47
MsaG025337	MsaG013561	0.802155	1.076932e-48	1.528843e-46
MsaG025337	MsaG027150	0.841160	1.042343e-57	4.220419e-55
MsaG025337	MsaG031514	0.819810	1.672215e-52	3.659141e-50
MsaG025337	MsaG030749	0.830446	5.259839e-55	1.541744e-52
MsaG025337	MsaG033404	0.830309	5.678919e-55	1.658107e-52
MsaG025337	MsaG030125	0.803940	4.623006e-49	6.838505e-47
MsaG025337	MsaG037042	0.821922	5.490815e-53	1.270708e-50
MsaG025337	MsaG043535	0.816499	9.305131e-52	1.868546e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025337	MtrunA17_Chr5g0400461	98.077	52	1	0	1	52	1	52	5.67e-32	114
MsaG025337	MtrunA17_Chr4g0054791	90.385	52	5	0	1	52	1	52	3.09e-29	107
MsaG025337	MtrunA17_Chr3g0109821	67.925	53	17	0	1	53	1	53	3.84e-22	89.7
MsaG025337	MtrunA17_Chr6g0481091	66.667	51	17	0	1	51	1	51	3.72e-20	81.6
MsaG025337	MtrunA17_Chr5g0433781	64.151	53	19	0	1	53	1	53	3.87e-20	84.0
MsaG025337	MtrunA17_Chr2g0309891	59.615	52	21	0	1	52	1	52	3.61e-18	77.8
MsaG025337	MtrunA17_Chr5g0417001	52.542	59	26	1	8	64	16	74	2.92e-17	75.5
MsaG025337	MtrunA17_Chr6g0453131	50.820	61	28	1	6	64	15	75	4.71e-17	74.7
MsaG025337	MtrunA17_Chr8g0361731	50.847	59	27	1	8	64	16	74	5.64e-17	74.7
MsaG025337	MtrunA17_Chr4g0047841	61.111	54	20	1	6	59	15	67	7.20e-17	73.9
MsaG025337	MtrunA17_Chr5g0442771	50.847	59	27	1	8	64	20	78	1.89e-16	72.8
MsaG025337	MtrunA17_Chr1g0200561	56.250	48	21	0	4	51	17	64	1.96e-16	72.8
MsaG025337	MtrunA17_Chr3g0130731	58.824	51	21	0	2	52	3	53	2.72e-16	72.0
MsaG025337	MtrunA17_Chr2g0318101	57.143	49	21	0	5	53	14	62	3.14e-16	72.4
MsaG025337	MtrunA17_Chr8g0384721	58.824	51	21	0	2	52	3	53	3.26e-16	71.6
MsaG025337	MtrunA17_Chr4g0076731	58.696	46	19	0	8	53	56	101	4.86e-16	72.0
MsaG025337	MtrunA17_Chr4g0056541	56.250	48	21	0	4	51	5	52	5.44e-16	71.6
MsaG025337	MtrunA17_Chr5g0405211	56.250	48	21	0	4	51	6	53	5.67e-16	71.6
MsaG025337	MtrunA17_Chr5g0417791	58.824	51	21	0	6	56	3	53	1.09e-15	70.1
MsaG025337	MtrunA17_Chr7g0214071	53.333	60	28	0	2	61	11	70	1.22e-15	69.7
MsaG025337	MtrunA17_Chr8g0372121	54.902	51	23	0	1	51	1	51	1.41e-15	70.5
MsaG025337	MtrunA17_Chr2g0318081	64.583	48	17	0	5	52	15	62	1.76e-15	70.5
MsaG025337	MtrunA17_Chr4g0018391	54.167	48	22	0	4	51	5	52	1.94e-15	70.1
MsaG025337	MtrunA17_Chr3g0124761	60.417	48	19	0	6	53	7	54	2.31e-15	69.3
MsaG025337	MtrunA17_Chr8g0359921	65.306	49	17	0	5	53	13	61	5.34e-15	68.9
MsaG025337	MtrunA17_Chr3g0131911	48.333	60	31	0	2	61	10	69	5.41e-15	67.8
MsaG025337	MtrunA17_Chr2g0311651	53.846	52	23	1	2	52	17	68	5.88e-15	68.6
MsaG025337	MtrunA17_Chr5g0398971	50.000	48	24	0	4	51	5	52	7.47e-15	68.6
MsaG025337	MtrunA17_Chr7g0252971	51.020	49	24	0	5	53	7	55	8.63e-15	68.2
MsaG025337	MtrunA17_Chr4g0042561	54.902	51	23	0	2	52	5	55	9.72e-15	67.8
MsaG025337	MtrunA17_Chr2g0311661	57.778	45	19	0	8	52	23	67	1.03e-14	67.8
MsaG025337	MtrunA17_Chr4g0050701	53.704	54	25	0	6	59	11	64	4.92e-14	64.7
MsaG025337	MtrunA17_Chr2g0309331	52.000	50	24	0	2	51	6	55	6.99e-14	65.9
MsaG025337	MtrunA17_Chr1g0197351	58.333	48	20	0	4	51	40	87	9.88e-14	65.5
MsaG025337	MtrunA17_Chr8g0346001	50.000	50	25	0	2	51	11	60	1.50e-13	65.1
MsaG025337	MtrunA17_Chr2g0326361	52.083	48	23	0	5	52	13	60	1.63e-13	64.7
MsaG025337	MtrunA17_Chr8g0385991	51.923	52	25	0	2	53	10	61	1.74e-13	63.5
MsaG025337	MtrunA17_Chr7g0263931	57.447	47	20	0	6	52	11	57	2.71e-13	63.9
MsaG025337	MtrunA17_Chr1g0197361	58.696	46	18	1	8	52	10	55	3.51e-13	63.9
MsaG025337	MtrunA17_Chr1g0201021	60.000	45	18	0	8	52	21	65	3.64e-13	63.9
MsaG025337	MtrunA17_Chr6g0484441	51.020	49	24	0	5	53	4	52	4.11e-13	63.5
MsaG025337	MtrunA17_Chr8g0345711	41.758	91	46	3	5	89	11	100	7.66e-13	61.2
MsaG025337	MtrunA17_Chr4g0017921	54.348	46	21	0	6	51	8	53	7.92e-13	62.8
MsaG025337	MtrunA17_Chr1g0194791	56.522	46	19	1	8	52	48	93	1.82e-12	58.5
MsaG025337	MtrunA17_Chr1g0147421	54.000	50	22	1	5	53	26	75	1.89e-12	62.0
MsaG025337	MtrunA17_Chr3g0092671	56.522	46	19	1	8	52	7	52	3.88e-12	61.2
MsaG025337	MtrunA17_Chr2g0316971	55.102	49	22	0	4	52	21	69	4.73e-12	60.8
MsaG025337	MtrunA17_Chr3g0128151	56.250	48	21	0	5	52	21	68	4.81e-12	60.8
MsaG025337	MtrunA17_Chr3g0130101	55.556	45	20	0	8	52	9	53	5.85e-12	60.5
MsaG025337	MtrunA17_Chr3g0139331	55.102	49	22	0	5	53	10	58	1.14e-11	59.7
MsaG025337	MtrunA17_Chr3g0091921	43.939	66	35	1	6	69	16	81	1.43e-11	59.3
MsaG025337	MtrunA17_Chr4g0060931	53.191	47	22	0	6	52	17	63	1.88e-11	58.9
MsaG025337	MtrunA17_Chr5g0428991	53.191	47	22	0	6	52	25	71	2.76e-11	58.5
MsaG025337	MtrunA17_Chr4g0026141	45.902	61	27	2	6	65	5	60	3.86e-11	57.8
MsaG025337	MtrunA17_Chr8g0384201	51.923	52	25	0	1	52	1	52	5.84e-11	57.8
MsaG025337	MtrunA17_Chr1g0183741	46.000	50	27	0	3	52	7	56	6.17e-11	57.4
MsaG025337	MtrunA17_Chr7g0261411	48.000	50	26	0	3	52	7	56	6.36e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025337	AT4G17980.1	86.792	53	7	0	1	53	1	53	7.05e-29	105
MsaG025337	AT4G17980.2	86.792	53	7	0	1	53	1	53	8.58e-29	105
MsaG025337	AT5G46590.2	86.538	52	7	0	1	52	1	52	7.25e-27	100
MsaG025337	AT5G46590.1	86.538	52	7	0	1	52	1	52	7.66e-27	100
MsaG025337	AT1G32510.1	75.000	52	13	0	1	52	1	52	2.77e-23	90.9
MsaG025337	AT3G03200.1	73.585	53	14	0	1	53	1	53	3.00e-23	92.8
MsaG025337	AT5G17260.1	71.698	53	15	0	1	53	1	53	9.96e-23	91.3
MsaG025337	AT1G65910.1	67.925	53	17	0	1	53	1	53	1.52e-21	88.2
MsaG025337	AT1G54330.1	67.308	52	17	0	1	52	1	52	2.61e-20	83.2
MsaG025337	AT3G17730.1	64.706	51	18	0	1	51	1	51	1.32e-19	80.5
MsaG025337	AT2G43000.1	59.322	59	22	1	8	64	20	78	3.70e-18	77.4
MsaG025337	AT2G33480.2	55.224	67	30	0	2	68	11	77	4.73e-17	74.3
MsaG025337	AT2G33480.1	55.224	67	30	0	2	68	11	77	5.05e-17	73.9
MsaG025337	AT5G66300.1	61.224	49	19	0	3	51	9	57	5.64e-17	74.3
MsaG025337	AT2G18060.3	56.863	51	22	0	1	51	4	54	7.70e-17	74.3
MsaG025337	AT2G18060.1	56.863	51	22	0	1	51	4	54	7.70e-17	74.3
MsaG025337	AT4G27410.3	64.706	51	18	0	5	55	13	63	1.25e-16	73.6
MsaG025337	AT1G61110.1	57.692	52	22	0	2	53	12	63	1.33e-16	73.6
MsaG025337	AT4G36160.1	60.000	50	20	0	5	54	9	58	1.40e-16	73.9
MsaG025337	AT4G36160.3	60.000	50	20	0	5	54	9	58	1.40e-16	73.9
MsaG025337	AT5G22290.1	59.615	52	21	0	1	52	16	67	1.50e-16	73.6
MsaG025337	AT4G36160.2	60.000	50	20	0	5	54	13	62	1.50e-16	73.9
MsaG025337	AT2G02450.2	60.870	46	18	0	8	53	53	98	1.56e-16	73.9
MsaG025337	AT2G02450.1	60.870	46	18	0	8	53	53	98	1.93e-16	73.6
MsaG025337	AT3G61910.1	52.000	50	24	0	2	51	7	56	2.92e-16	72.8
MsaG025337	AT4G27410.2	66.667	48	16	0	5	52	13	60	5.27e-16	71.6
MsaG025337	AT1G01720.1	62.500	48	18	0	6	53	7	54	1.16e-15	70.9
MsaG025337	AT3G44290.2	64.444	45	16	0	8	52	16	60	1.28e-15	69.7
MsaG025337	AT1G71930.2	56.250	48	21	0	4	51	7	54	1.31e-15	70.9
MsaG025337	AT1G71930.1	56.250	48	21	0	4	51	7	54	1.31e-15	70.9
MsaG025337	AT1G26870.1	59.574	47	19	0	6	52	16	62	1.34e-15	71.2
MsaG025337	AT1G69490.1	57.143	49	21	0	4	52	7	55	1.43e-15	70.1
MsaG025337	AT3G04070.1	58.000	50	21	0	4	53	8	57	2.01e-15	70.5
MsaG025337	AT3G04070.2	58.000	50	21	0	4	53	8	57	2.04e-15	70.5
MsaG025337	AT3G44290.1	64.444	45	16	0	8	52	16	60	2.06e-15	70.5
MsaG025337	AT1G12260.1	56.250	48	21	0	4	51	5	52	3.21e-15	70.1
MsaG025337	AT2G46770.1	52.000	50	24	0	2	51	12	61	3.80e-15	69.7
MsaG025337	AT3G12910.1	50.000	66	28	3	8	69	23	87	4.34e-15	69.3
MsaG025337	AT1G12260.2	56.250	48	21	0	4	51	5	52	4.38e-15	69.7
MsaG025337	AT5G39820.1	57.778	45	19	0	8	52	22	66	5.13e-15	69.3
MsaG025337	AT2G27300.1	59.184	49	20	0	4	52	12	60	5.85e-15	69.3
MsaG025337	AT5G64530.2	52.727	55	26	0	5	59	2	56	7.69e-15	66.2
MsaG025337	AT1G33060.2	57.143	49	21	0	5	53	23	71	9.27e-15	68.9
MsaG025337	AT1G33060.1	57.143	49	21	0	5	53	23	71	9.54e-15	68.9
MsaG025337	AT1G52890.1	62.500	48	18	0	5	52	13	60	1.22e-14	68.2
MsaG025337	AT3G10480.3	54.902	51	23	0	1	51	22	72	1.26e-14	68.6
MsaG025337	AT3G10480.1	54.902	51	23	0	1	51	22	72	1.32e-14	68.6
MsaG025337	AT3G10480.2	54.902	51	23	0	1	51	22	72	1.35e-14	68.6
MsaG025337	AT5G64530.1	52.727	55	26	0	5	59	2	56	1.59e-14	66.2
MsaG025337	AT1G34190.1	59.615	52	21	0	2	53	12	63	1.86e-14	68.2
MsaG025337	AT3G10490.1	57.143	49	21	0	3	51	24	72	1.87e-14	67.0
MsaG025337	AT5G13180.1	49.254	67	34	0	2	68	10	76	2.02e-14	67.0
MsaG025337	AT3G15500.1	62.500	48	18	0	5	52	13	60	2.47e-14	67.4
MsaG025337	AT5G04410.1	59.184	49	20	0	4	52	7	55	2.54e-14	67.8
MsaG025337	AT3G10490.2	57.143	49	21	0	3	51	24	72	2.67e-14	67.4
MsaG025337	AT5G64060.1	55.769	52	23	0	1	52	1	52	2.68e-14	67.4
MsaG025337	AT4G10350.1	53.704	54	22	1	1	51	1	54	2.82e-14	67.4
MsaG025337	AT3G10500.1	58.333	48	20	0	5	52	8	55	3.39e-14	67.4
MsaG025337	AT1G79580.3	58.000	50	21	0	2	51	13	62	3.91e-14	67.0
MsaG025337	AT1G79580.5	58.000	50	21	0	2	51	13	62	3.91e-14	67.0
MsaG025337	AT1G79580.4	58.000	50	21	0	2	51	13	62	3.91e-14	67.0
MsaG025337	AT1G79580.2	58.000	50	21	0	2	51	13	62	3.91e-14	67.0
MsaG025337	AT1G79580.1	58.000	50	21	0	2	51	13	62	3.91e-14	67.0
MsaG025337	AT5G08790.1	60.417	48	19	0	5	52	6	53	4.55e-14	66.2
MsaG025337	AT1G32770.1	50.000	50	25	0	2	51	12	61	6.32e-14	66.2
MsaG025337	AT5G04395.1	56.250	48	21	0	4	51	26	73	8.47e-14	64.3
MsaG025337	AT5G63790.1	58.333	48	20	0	5	52	49	96	1.06e-13	65.5
MsaG025337	AT1G62700.1	52.083	48	23	0	4	51	5	52	1.08e-13	65.9
MsaG025337	AT1G62700.2	52.083	48	23	0	4	51	5	52	1.08e-13	65.9
MsaG025337	AT5G63790.2	58.333	48	20	0	5	52	59	106	1.16e-13	65.5
MsaG025337	AT5G62380.2	52.083	48	23	0	4	51	5	52	1.67e-13	65.1
MsaG025337	AT5G62380.1	52.083	48	23	0	4	51	5	52	1.67e-13	65.1
MsaG025337	AT1G34180.2	59.574	47	19	0	8	54	18	64	2.36e-13	65.1
MsaG025337	AT1G34180.4	59.574	47	19	0	8	54	18	64	2.52e-13	64.7
MsaG025337	AT1G52880.1	56.818	44	19	0	10	53	21	64	2.69e-13	64.3
MsaG025337	AT5G09330.5	53.846	52	24	0	1	52	1	52	2.70e-13	64.7
MsaG025337	AT5G09330.2	53.846	52	24	0	1	52	1	52	2.70e-13	64.7
MsaG025337	AT5G09330.4	53.846	52	24	0	1	52	1	52	2.70e-13	64.7
MsaG025337	AT5G09330.3	53.846	52	24	0	1	52	1	52	2.70e-13	64.7
MsaG025337	AT5G09330.1	53.846	52	24	0	1	52	1	52	2.70e-13	64.7
MsaG025337	AT1G34180.1	60.870	46	18	0	8	53	18	63	3.34e-13	64.3
MsaG025337	AT1G34180.3	60.870	46	18	0	8	53	18	63	3.85e-13	64.3
MsaG025337	AT1G33280.1	56.522	46	20	0	6	51	8	53	5.36e-13	63.5
MsaG025337	AT4G35580.3	53.061	49	23	0	5	53	8	56	6.42e-13	63.5
MsaG025337	AT4G35580.2	53.061	49	23	0	5	53	8	56	6.55e-13	63.5
MsaG025337	AT3G15510.1	56.818	44	19	0	10	53	21	64	9.62e-13	63.2
MsaG025337	AT5G24590.2	55.102	49	22	0	4	52	11	59	2.25e-12	62.0
MsaG025337	AT4G35580.1	53.061	49	23	0	5	53	8	56	2.26e-12	62.0
MsaG025337	AT3G49530.1	54.167	48	22	0	5	52	12	59	2.33e-12	62.0
MsaG025337	AT1G77450.1	52.830	53	23	1	2	52	4	56	2.40e-12	61.2
MsaG025337	AT2G17040.1	56.522	46	20	0	8	53	8	53	2.99e-12	61.2
MsaG025337	AT3G49530.2	54.167	48	22	0	5	52	12	59	3.91e-12	61.2
MsaG025337	AT2G24430.2	54.167	48	22	0	5	52	15	62	4.29e-12	61.2
MsaG025337	AT2G24430.1	54.167	48	22	0	5	52	15	62	4.29e-12	61.2
MsaG025337	AT3G18400.1	51.020	49	24	0	5	53	4	52	6.15e-12	60.5
MsaG025337	AT3G15170.1	55.319	47	21	0	6	52	20	66	6.19e-12	60.5
MsaG025337	AT5G07680.2	57.447	47	20	0	6	52	3	49	6.62e-12	60.5
MsaG025337	AT5G53950.1	55.556	54	22	1	2	53	11	64	6.67e-12	60.8
MsaG025337	AT5G07680.1	57.447	47	20	0	6	52	17	63	7.04e-12	60.5
MsaG025337	AT5G61430.1	55.319	47	21	0	6	52	16	62	7.91e-12	60.5
MsaG025337	AT3G04060.1	42.424	66	36	1	6	69	20	85	3.28e-11	58.5

Find 31 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCGTTCCCATTGGTTGAAA+TGG	0.287030	5:-6828287	None:intergenic
AATTCTACAAATTTGATCCT+TGG	0.356563	5:+6827082	MsaT025337.1:CDS
ATTCTACAAATTTGATCCTT+GGG	0.375015	5:+6827083	MsaT025337.1:CDS
AATTTGTAGAATTCAATAAC+AGG	0.424548	5:-6827072	None:intergenic
TGGGAACGAGGTTTCTTGTC+AGG	0.433403	5:+6828300	MsaT025337.1:CDS
TCGAAGGACAAGGAGGAAAG+AGG	0.464828	5:+6828239	MsaT025337.1:CDS
CCAACCGATGAAGAGTTGAT+AGG	0.477569	5:+6826997	MsaT025337.1:CDS
GCAATTCCATTTCAACCAAT+GGG	0.481299	5:+6828281	MsaT025337.1:CDS
AAGAGGGTTAGAGCTAATGA+TGG	0.484892	5:+6828256	MsaT025337.1:CDS
AGCAATTCCATTTCAACCAA+TGG	0.488117	5:+6828280	MsaT025337.1:CDS
GGAGGAGCTTCACTGCCTCC+AGG	0.489497	5:+6826961	MsaT025337.1:CDS
CCTATCAACTCTTCATCGGT+TGG	0.504532	5:-6826997	None:intergenic
TCAACTCTTCATCGGTTGGA+TGG	0.522689	5:-6826993	None:intergenic
ACAAGAAACCTCGTTCCCAT+TGG	0.531913	5:-6828296	None:intergenic
AGACATTTACCTCCGAGCCT+TGG	0.532346	5:-6828067	None:intergenic
TTTGATCCTTGGGAGTTACC+TGG	0.560186	5:+6827093	MsaT025337.1:CDS
GAAATTGAAGATGACCTACC+AGG	0.568955	5:-6827111	None:intergenic
ATATCCTATCAACTCTTCAT+CGG	0.573542	5:-6827001	None:intergenic
CATTTCAACCAATGGGAACG+AGG	0.580432	5:+6828288	MsaT025337.1:CDS
CGAAGGACAAGGAGGAAAGA+GGG	0.583348	5:+6828240	MsaT025337.1:CDS
GTTGGATGGAAACGAAAACC+TGG	0.583973	5:-6826979	None:intergenic
TGAGAAGGCAAATGATTCGA+AGG	0.585286	5:+6828223	MsaT025337.1:CDS
TGATGATCCTAGCCAAGGCT+CGG	0.588446	5:+6828055	MsaT025337.1:intron
ATCCTTGGGAGTTACCTGGT+AGG	0.625230	5:+6827097	MsaT025337.1:CDS
ACATAGAAATATAGAATGGG+AGG	0.627145	5:+6826943	None:intergenic
AGAGGGTTAGAGCTAATGAT+GGG	0.630099	5:+6828257	MsaT025337.1:CDS
GGCAAATGATTCGAAGGACA+AGG	0.640965	5:+6828229	MsaT025337.1:CDS
GACCTACCAGGTAACTCCCA+AGG	0.644578	5:-6827099	None:intergenic
TGATCCTAGCCAAGGCTCGG+AGG	0.696143	5:+6828058	MsaT025337.1:intron
AAATGATTCGAAGGACAAGG+AGG	0.713594	5:+6828232	MsaT025337.1:CDS
GGATGGAAACGAAAACCTGG+AGG	0.767680	5:-6826976	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	6826958	6828337	6826958	ID=MsaG025337
Chr5	mRNA	6826958	6828337	6826958	ID=MsaT025337.1;Parent=MsaG025337
Chr5	exon	6826958	6827118	6826958	ID=MsaT025337.1.exon1;Parent=MsaT025337.1
Chr5	CDS	6826958	6827118	6826958	ID=cds.MsaT025337.1;Parent=MsaT025337.1
Chr5	exon	6828067	6828079	6828067	ID=MsaT025337.1.exon2;Parent=MsaT025337.1
Chr5	CDS	6828067	6828079	6828067	ID=cds.MsaT025337.1;Parent=MsaT025337.1
Chr5	exon	6828188	6828337	6828188	ID=MsaT025337.1.exon3;Parent=MsaT025337.1
Chr5	CDS	6828188	6828337	6828188	ID=cds.MsaT025337.1;Parent=MsaT025337.1

Gene Sequence	>MsaT025337.1 ATGGGAGGAGCTTCACTGCCTCCAGGTTTTCGTTTCCATCCAACCGATGAAGAGTTGATAGGATATTACCTAAAAAGAAAAGTTGAGGGACTTGAAATTGAGCTTGAAGTTATACCTGTTATTGAATTCTACAAATTTGATCCTTGGGAGTTACCTGGTAGCCAAGGCTCGGAGGGTGCTTTTGCTTTATGCCGAGTTATTAAAAAGAATGAGAAGGCAAATGATTCGAAGGACAAGGAGGAAAGAGGGTTAGAGCTAATGATGGGAGCAATTCCATTTCAACCAATGGGAACGAGGTTTCTTGTCAGGCAAGTCAACTATTGA
Protein sequence	>MsaT025337.1 MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIEFYKFDPWELPGSQGSEGAFALCRVIKKNEKANDSKDKEERGLELMMGAIPFQPMGTRFLVRQVNY*