AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025367

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025367 MtrunA17_Chr5g0400821 91.358 324 8 4 1 319 1 309 0.0 573
MsaG025367 MtrunA17_Chr4g0054391 53.681 326 104 13 1 316 1 289 5.55e-91 273
MsaG025367 MtrunA17_Chr1g0152011 78.107 169 32 2 1 166 1 167 7.44e-91 274
MsaG025367 MtrunA17_Chr3g0135311 69.942 173 50 1 1 173 1 171 2.89e-85 260
MsaG025367 MtrunA17_Chr4g0072751 95.495 111 5 0 1 111 1 111 6.52e-76 236
MsaG025367 MtrunA17_Chr4g0028311 85.124 121 18 0 1 121 1 121 6.85e-75 233
MsaG025367 MtrunA17_Chr7g0264641 69.718 142 43 0 1 142 1 142 2.00e-72 225
MsaG025367 MtrunA17_Chr2g0327351 88.288 111 13 0 1 111 1 111 1.61e-71 224
MsaG025367 MtrunA17_Chr1g0151941 77.966 118 26 0 1 118 1 118 1.33e-67 212
MsaG025367 MtrunA17_Chr6g0487491 48.230 226 80 5 1 215 1 200 1.94e-63 201
MsaG025367 MtrunA17_Chr6g0452271 64.407 118 41 1 1 118 1 117 4.54e-54 179
MsaG025367 MtrunA17_Chr3g0103281 66.387 119 39 1 1 119 1 118 2.23e-53 177
MsaG025367 MtrunA17_Chr3g0115821 63.559 118 42 1 1 118 1 117 1.03e-51 174
MsaG025367 MtrunA17_Chr6g0453471 64.103 117 41 1 1 117 1 116 8.76e-51 172
MsaG025367 MtrunA17_Chr4g0039971 62.712 118 43 1 1 118 2 118 1.92e-50 171
MsaG025367 MtrunA17_Chr1g0167691 53.548 155 67 4 1 154 1 151 2.95e-50 167
MsaG025367 MtrunA17_Chr7g0217741 64.103 117 41 1 1 117 1 116 3.85e-50 169
MsaG025367 MtrunA17_Chr1g0187761 55.944 143 55 2 1 143 1 135 4.62e-50 167
MsaG025367 MtrunA17_Chr4g0042671 65.812 117 39 1 1 117 1 116 6.11e-50 171
MsaG025367 MtrunA17_Chr7g0217221 63.636 121 43 1 1 121 1 120 1.05e-49 166
MsaG025367 MtrunA17_Chr4g0037141 59.167 120 48 1 1 120 1 119 1.74e-49 166
MsaG025367 MtrunA17_Chr8g0346561 60.000 125 46 2 1 125 1 121 1.79e-49 167
MsaG025367 MtrunA17_Chr5g0410961 62.712 118 43 1 1 118 1 117 2.40e-49 167
MsaG025367 MtrunA17_Chr1g0167661 56.522 138 58 2 1 138 1 136 3.45e-49 164
MsaG025367 MtrunA17_Chr1g0203411 46.857 175 83 4 1 166 1 174 4.27e-49 166
MsaG025367 MtrunA17_Chr7g0275911 58.065 124 51 1 1 124 1 123 6.30e-49 164
MsaG025367 MtrunA17_Chr4g0048511 62.185 119 43 2 1 118 1 118 1.03e-48 166
MsaG025367 MtrunA17_Chr2g0323411 62.712 118 43 1 1 118 1 117 1.22e-48 165
MsaG025367 MtrunA17_Chr2g0281071 62.185 119 43 2 1 118 1 118 1.43e-48 166
MsaG025367 MtrunA17_Chr3g0131121 58.333 120 49 1 1 120 1 119 1.80e-48 164
MsaG025367 MtrunA17_Chr7g0261281 53.285 137 63 1 1 137 1 136 3.12e-48 162
MsaG025367 MtrunA17_Chr4g0060721 45.977 174 92 2 1 173 2 174 3.44e-48 164
MsaG025367 MtrunA17_Chr8g0385321 59.167 120 48 1 1 120 1 119 1.11e-47 162
MsaG025367 MtrunA17_Chr8g0349261 59.664 119 47 1 1 118 1 119 1.46e-47 161
MsaG025367 MtrunA17_Chr7g0274581 59.829 117 46 1 1 117 1 116 1.85e-47 158
MsaG025367 MtrunA17_Chr3g0092401 47.436 156 81 1 1 156 2 156 2.79e-47 161
MsaG025367 MtrunA17_Chr4g0058631 61.017 118 45 1 1 118 1 117 4.06e-47 162
MsaG025367 MtrunA17_Chr7g0228891 44.262 183 89 4 1 171 1 182 4.80e-47 159
MsaG025367 MtrunA17_Chr2g0323351 53.030 132 61 1 1 132 1 131 2.94e-46 157
MsaG025367 MtrunA17_Chr7g0254411 60.684 117 45 1 1 117 1 116 3.30e-46 159
MsaG025367 MtrunA17_Chr5g0435101 56.897 116 49 1 3 118 2 116 4.03e-46 155
MsaG025367 MtrunA17_Chr4g0057031 59.322 118 47 1 1 118 1 117 4.06e-46 157
MsaG025367 MtrunA17_Chr1g0193371 45.652 184 95 4 1 182 1 181 5.91e-46 159
MsaG025367 MtrunA17_Chr3g0117091 59.322 118 47 1 1 118 1 117 1.64e-45 157
MsaG025367 MtrunA17_Chr4g0070611 56.098 123 53 1 1 123 1 122 2.34e-45 156
MsaG025367 MtrunA17_Chr5g0395281 58.475 118 48 1 1 118 1 117 2.59e-45 156
MsaG025367 MtrunA17_Chr4g0070641 58.120 117 48 1 1 117 1 116 2.86e-45 151
MsaG025367 MtrunA17_Chr1g0193801 59.167 120 48 1 1 120 1 119 3.20e-45 158
MsaG025367 MtrunA17_Chr6g0453211 63.063 111 40 1 1 111 1 110 4.13e-45 155
MsaG025367 MtrunA17_Chr7g0270891 60.000 120 47 1 1 120 1 119 4.66e-45 157
MsaG025367 MtrunA17_Chr3g0110351 59.829 117 46 1 1 117 1 116 6.30e-45 155
MsaG025367 MtrunA17_Chr4g0022901 52.143 140 64 3 1 138 1 139 6.36e-45 154
MsaG025367 MtrunA17_Chr4g0068061 56.410 117 50 1 1 117 1 116 7.93e-45 155
MsaG025367 MtrunA17_Chr4g0022931 56.557 122 51 2 1 121 1 121 1.00e-44 153
MsaG025367 MtrunA17_Chr2g0311221 59.459 111 44 1 2 112 4 113 1.17e-44 155
MsaG025367 MtrunA17_Chr5g0434571 49.669 151 73 2 1 149 37 186 1.36e-44 155
MsaG025367 MtrunA17_Chr3g0121241 56.034 116 50 1 5 120 35 149 1.93e-44 154
MsaG025367 MtrunA17_Chr4g0022891 49.640 139 69 1 1 139 1 138 1.96e-44 152
MsaG025367 MtrunA17_Chr8g0387421 57.265 117 49 1 1 117 1 116 3.69e-44 153
MsaG025367 MtrunA17_Chr1g0211161 57.759 116 48 1 3 118 4 118 5.69e-44 150
MsaG025367 MtrunA17_Chr2g0330041 55.833 120 52 1 1 120 1 119 2.36e-43 153
MsaG025367 MtrunA17_Chr8g0342541 55.932 118 51 1 1 118 1 117 1.23e-42 150
MsaG025367 MtrunA17_Chr1g0194951 55.556 117 51 1 1 117 1 116 1.66e-42 150
MsaG025367 MtrunA17_Chr7g0271241 60.909 110 42 1 1 110 1 109 2.29e-42 150
MsaG025367 MtrunA17_Chr5g0397231 58.559 111 45 1 1 111 1 110 2.51e-42 149
MsaG025367 MtrunA17_Chr4g0022911 46.309 149 68 3 1 138 1 148 5.25e-42 147
MsaG025367 MtrunA17_Chr8g0342521 55.000 120 53 1 1 120 1 119 6.08e-42 148
MsaG025367 MtrunA17_Chr8g0342481 53.782 119 55 0 1 119 1 119 9.62e-42 149
MsaG025367 MtrunA17_Chr2g0309911 53.913 115 52 1 6 120 5 118 8.32e-41 144
MsaG025367 MtrunA17_Chr4g0022881 54.783 115 51 1 1 115 1 114 5.15e-40 140
MsaG025367 MtrunA17_Chr4g0044421 52.941 119 54 2 3 120 2 119 6.13e-40 139
MsaG025367 MtrunA17_Chr7g0269831 58.120 117 48 1 1 117 1 116 7.32e-40 143
MsaG025367 MtrunA17_Chr1g0203441 51.145 131 62 2 1 130 1 130 3.98e-39 139
MsaG025367 MtrunA17_Chr5g0417821 57.009 107 45 1 12 118 7 112 7.45e-39 139
MsaG025367 MtrunA17_Chr2g0328771 56.604 106 45 1 12 117 20 124 1.02e-38 139
MsaG025367 MtrunA17_Chr8g0354661 57.143 105 44 1 12 116 37 140 1.92e-38 142
MsaG025367 MtrunA17_Chr3g0099131 57.009 107 45 1 10 116 39 144 2.58e-38 142
MsaG025367 MtrunA17_Chr6g0470971 51.969 127 60 1 4 130 6 131 2.74e-38 137
MsaG025367 MtrunA17_Chr5g0434931 55.963 109 47 1 12 120 35 142 6.69e-38 136
MsaG025367 MtrunA17_Chr3g0088461 55.455 110 48 1 8 117 18 126 1.09e-37 137
MsaG025367 MtrunA17_Chr7g0220341 52.419 124 56 2 12 133 25 147 1.21e-37 135
MsaG025367 MtrunA17_Chr4g0055981 52.459 122 57 1 9 130 52 172 1.28e-37 134
MsaG025367 MtrunA17_Chr4g0032401 56.604 106 45 1 12 117 17 121 1.81e-37 136
MsaG025367 MtrunA17_Chr5g0434911 53.509 114 52 1 7 120 16 128 4.25e-37 134
MsaG025367 MtrunA17_Chr8g0343831 56.410 117 46 2 1 117 1 112 4.60e-37 133
MsaG025367 MtrunA17_Chr3g0080861 56.190 105 45 1 12 116 37 140 8.74e-37 138
MsaG025367 MtrunA17_Chr7g0228231 52.893 121 54 2 11 131 13 130 1.00e-36 130
MsaG025367 MtrunA17_Chr6g0450101 41.053 190 95 5 1 184 1 179 2.34e-36 130
MsaG025367 MtrunA17_Chr7g0240821 54.386 114 51 1 16 129 5 117 3.30e-36 130
MsaG025367 MtrunA17_Chr7g0228991 55.046 109 48 1 12 120 29 136 1.09e-35 130
MsaG025367 MtrunA17_Chr1g0194301 54.128 109 49 1 8 116 29 136 8.91e-35 127
MsaG025367 MtrunA17_Chr5g0440781 53.271 107 48 2 10 115 10 115 1.66e-34 124
MsaG025367 MtrunA17_Chr2g0322521 55.556 108 47 1 9 116 26 132 3.43e-34 129
MsaG025367 MtrunA17_Chr1g0209661 54.286 105 47 1 12 116 27 130 4.23e-34 127
MsaG025367 MtrunA17_Chr1g0180391 52.679 112 52 1 10 121 17 127 4.81e-34 124
MsaG025367 MtrunA17_Chr8g0360111 57.843 102 42 1 12 113 25 125 4.89e-34 125
MsaG025367 MtrunA17_Chr5g0434831 53.271 107 49 1 12 118 7 112 5.28e-34 123
MsaG025367 MtrunA17_Chr4g0042611 59.551 89 35 1 1 89 1 88 6.97e-34 119
MsaG025367 MtrunA17_Chr1g0186061 53.846 104 47 1 13 116 21 123 1.20e-33 124
MsaG025367 MtrunA17_Chr5g0441141 53.271 107 48 2 10 115 10 115 1.20e-33 124
MsaG025367 MtrunA17_Chr5g0440761 53.271 107 48 2 10 115 10 115 1.21e-33 124
MsaG025367 MtrunA17_Chr5g0434841 52.294 109 51 1 12 120 20 127 1.25e-33 125
MsaG025367 MtrunA17_Chr1g0168661 54.808 104 46 1 13 116 22 124 1.41e-33 124
MsaG025367 MtrunA17_Chr1g0192411 51.376 109 52 1 8 116 8 115 2.01e-33 127
MsaG025367 MtrunA17_Chr1g0194291 52.294 109 51 1 8 116 17 124 1.06e-32 122
MsaG025367 MtrunA17_Chr1g0154031 50.476 105 51 1 12 116 76 179 1.46e-31 122
MsaG025367 MtrunA17_Chr4g0068921 52.586 116 52 2 8 123 20 132 1.75e-31 116
MsaG025367 MtrunA17_Chr5g0441131 51.402 107 50 2 10 115 7 112 2.41e-31 116
MsaG025367 MtrunA17_Chr2g0294811 54.839 93 41 1 1 93 1 92 5.69e-31 113
MsaG025367 MtrunA17_Chr2g0327821 48.649 111 56 1 12 122 6 115 2.30e-30 115
MsaG025367 MtrunA17_Chr7g0247131 55.789 95 40 1 46 138 11 105 3.36e-30 115
MsaG025367 MtrunA17_Chr2g0293911 52.778 108 50 1 8 115 20 126 4.58e-30 116
MsaG025367 MtrunA17_Chr3g0099141 54.545 88 39 1 8 95 36 122 7.46e-29 108
MsaG025367 MtrunA17_Chr5g0401731 45.082 122 65 2 14 135 15 134 1.36e-28 112
MsaG025367 MtrunA17_Chr8g0334881 47.706 109 55 2 8 115 6 113 4.56e-28 110
MsaG025367 MtrunA17_Chr4g0053431 36.559 186 106 5 14 193 5 184 6.91e-28 109
MsaG025367 MtrunA17_Chr4g0008551 50.000 106 51 2 14 119 38 141 1.78e-27 110
MsaG025367 MtrunA17_Chr8g0342461 52.222 90 43 0 1 90 1 90 2.70e-27 103
MsaG025367 MtrunA17_Chr8g0342471 52.222 90 43 0 1 90 1 90 3.19e-27 103
MsaG025367 MtrunA17_Chr3g0133601 47.706 109 55 2 8 116 31 137 4.18e-27 106
MsaG025367 MtrunA17_Chr8g0342511 54.023 87 39 1 1 87 1 86 4.23e-27 102
MsaG025367 MtrunA17_Chr4g0030881 46.018 113 49 3 13 116 8 117 4.76e-27 107
MsaG025367 MtrunA17_Chr6g0454921 48.544 103 51 2 14 116 15 115 9.46e-27 104
MsaG025367 MtrunA17_Chr8g0342531 52.222 90 42 1 1 90 1 89 9.99e-27 103
MsaG025367 MtrunA17_Chr4g0013361 46.789 109 56 2 8 115 6 113 1.43e-26 106
MsaG025367 MtrunA17_Chr5g0434901 64.286 70 25 0 45 114 5 74 2.01e-26 101
MsaG025367 MtrunA17_Chr2g0323321 48.387 93 46 2 1 93 1 91 4.08e-26 100
MsaG025367 MtrunA17_Chr5g0395221 51.685 89 42 1 1 89 1 88 6.17e-26 99.0
MsaG025367 MtrunA17_Chr3g0093811 56.627 83 33 1 38 117 4 86 5.15e-25 101
MsaG025367 MtrunA17_Chr7g0229131 42.857 105 58 1 46 148 5 109 5.49e-24 96.3
MsaG025367 MtrunA17_Chr7g0229101 60.870 69 27 0 46 114 5 73 6.42e-24 97.1
MsaG025367 MtrunA17_Chr4g0042501 34.177 158 88 5 14 165 105 252 1.01e-23 100
MsaG025367 MtrunA17_Chr5g0429661 39.167 120 71 2 14 133 122 239 2.71e-23 98.6
MsaG025367 MtrunA17_Chr5g0417621 34.574 188 100 8 14 197 134 302 4.66e-23 99.0
MsaG025367 MtrunA17_Chr6g0480581 40.179 112 60 3 14 125 4 108 6.53e-23 95.1
MsaG025367 MtrunA17_Chr6g0460661 41.379 116 62 4 14 125 16 129 3.01e-22 91.3
MsaG025367 MtrunA17_Chr5g0437321 46.000 100 52 2 14 113 19 116 1.22e-21 92.8
MsaG025367 MtrunA17_Chr4g0058991 42.593 108 60 2 9 116 204 309 2.74e-21 94.0
MsaG025367 MtrunA17_Chr5g0425591 49.425 87 42 2 11 96 8 93 4.92e-21 85.9
MsaG025367 MtrunA17_Chr6g0460671 38.525 122 69 3 14 135 99 214 1.90e-20 90.5
MsaG025367 MtrunA17_Chr3g0117511 41.667 108 61 2 9 116 178 283 2.28e-20 91.3
MsaG025367 MtrunA17_Chr3g0125801 40.833 120 63 3 8 121 10 127 9.45e-20 87.4
MsaG025367 MtrunA17_Chr7g0254261 36.957 138 77 4 14 148 89 219 1.09e-19 88.2
MsaG025367 MtrunA17_Chr6g0453751 43.617 94 43 3 12 96 20 112 1.22e-19 83.6
MsaG025367 MtrunA17_Chr7g0238631 45.794 107 50 3 14 117 113 214 2.61e-19 88.6
MsaG025367 MtrunA17_Chr3g0139671 41.346 104 59 2 14 117 85 186 8.08e-19 87.4
MsaG025367 MtrunA17_Chr7g0238651 42.268 97 53 2 17 111 10 105 2.64e-18 84.3
MsaG025367 MtrunA17_Chr7g0228401 29.762 168 91 4 11 154 252 416 1.03e-17 83.6
MsaG025367 MtrunA17_Chr7g0228531 29.677 155 106 3 11 165 217 368 1.24e-17 83.2
MsaG025367 MtrunA17_Chr1g0157731 40.385 104 60 2 14 117 91 192 1.52e-17 83.6
MsaG025367 MtrunA17_Chr1g0157731 35.644 101 62 3 14 113 39 137 1.93e-11 65.1
MsaG025367 MtrunA17_Chr5g0397841 43.000 100 55 2 11 110 107 204 6.88e-17 80.9
MsaG025367 MtrunA17_Chr7g0233061 31.757 148 87 4 10 149 176 317 1.68e-16 79.3
MsaG025367 MtrunA17_Chr1g0177901 46.154 78 42 0 34 111 12 89 1.80e-16 77.0
MsaG025367 MtrunA17_Chr5g0416341 36.434 129 74 3 17 145 29 149 1.76e-15 76.6
MsaG025367 MtrunA17_Chr8g0362231 40.000 100 58 2 17 116 25 122 2.92e-15 75.9
MsaG025367 MtrunA17_Chr7g0228481 28.395 162 109 5 11 170 217 373 1.44e-14 73.9
MsaG025367 MtrunA17_Chr7g0247141 55.319 47 21 0 1 47 1 47 3.14e-14 66.6
MsaG025367 MtrunA17_Chr1g0193901 52.542 59 26 2 12 69 11 68 2.15e-13 65.9
MsaG025367 MtrunA17_Chr1g0193891 52.542 59 26 2 12 69 11 68 2.15e-13 65.9
MsaG025367 MtrunA17_Chr1g0193871 52.542 59 26 2 12 69 11 68 2.15e-13 65.9
MsaG025367 MtrunA17_Chr1g0193881 52.542 59 26 2 12 69 11 68 2.15e-13 65.9
MsaG025367 MtrunA17_Chr5g0434871 56.818 44 19 0 75 118 2 45 1.28e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025367 AT3G49690.1 49.524 315 122 9 1 290 1 303 2.88e-86 262
MsaG025367 AT5G65790.1 75.723 173 27 4 1 165 1 166 3.03e-85 261
MsaG025367 AT5G57620.1 52.075 265 91 7 1 238 1 256 4.74e-81 249
MsaG025367 AT4G37780.1 79.545 132 27 0 1 132 1 132 2.82e-76 236
MsaG025367 AT2G36890.1 83.193 119 20 0 1 119 1 119 5.27e-72 225
MsaG025367 AT2G36890.2 83.193 119 20 0 1 119 42 160 7.37e-72 226
MsaG025367 AT5G23000.1 64.286 154 55 0 1 154 1 154 2.16e-69 219
MsaG025367 AT5G56110.1 68.067 119 37 1 1 119 1 118 5.73e-55 182
MsaG025367 AT3G01140.2 64.407 118 41 1 1 118 1 117 3.42e-52 175
MsaG025367 AT5G15310.4 63.559 118 42 1 1 118 1 117 6.12e-52 172
MsaG025367 AT5G15310.1 63.559 118 42 1 1 118 1 117 2.37e-51 172
MsaG025367 AT5G15310.2 63.559 118 42 1 1 118 1 117 2.58e-51 172
MsaG025367 AT5G16770.4 62.712 118 43 1 1 118 1 117 2.54e-50 170
MsaG025367 AT5G16770.3 62.712 118 43 1 1 118 1 117 2.54e-50 170
MsaG025367 AT1G16490.1 63.793 116 41 1 2 117 4 118 2.82e-50 168
MsaG025367 AT3G02940.2 61.017 118 45 1 1 118 1 117 3.88e-50 169
MsaG025367 AT3G23250.1 63.248 117 42 1 1 117 1 116 5.61e-50 168
MsaG025367 AT5G16770.1 62.712 118 43 1 1 118 1 117 6.44e-50 169
MsaG025367 AT5G16770.2 62.712 118 43 1 1 118 1 117 6.44e-50 169
MsaG025367 AT3G02940.1 61.017 118 45 1 1 118 1 117 7.10e-50 169
MsaG025367 AT3G02940.3 61.017 118 45 1 1 118 1 117 7.10e-50 169
MsaG025367 AT4G21440.1 61.864 118 44 1 1 118 1 117 9.81e-50 169
MsaG025367 AT3G61250.1 61.864 118 44 1 1 118 1 117 9.90e-50 167
MsaG025367 AT4G28110.1 62.712 118 43 1 1 118 1 117 1.00e-49 167
MsaG025367 AT4G05100.1 63.866 119 41 2 1 118 1 118 1.82e-49 167
MsaG025367 AT1G22640.1 45.455 176 80 2 1 176 1 160 2.42e-49 165
MsaG025367 AT3G47600.1 64.103 117 41 1 1 117 1 116 3.17e-49 167
MsaG025367 AT3G01140.1 63.478 115 41 1 4 118 47 160 4.98e-49 168
MsaG025367 AT2G16720.1 59.167 120 48 1 1 120 1 119 5.19e-49 165
MsaG025367 AT1G08810.1 43.158 190 101 3 1 190 1 183 8.32e-49 164
MsaG025367 AT1G79180.1 62.931 116 42 1 2 117 4 118 8.61e-49 165
MsaG025367 AT4G17785.2 63.025 119 42 2 1 118 1 118 9.00e-49 166
MsaG025367 AT3G62610.1 59.055 127 51 1 1 127 1 126 1.08e-48 166
MsaG025367 AT5G62470.2 63.248 117 42 1 1 117 1 116 1.36e-48 166
MsaG025367 AT4G17785.1 63.025 119 42 2 1 118 1 118 1.37e-48 166
MsaG025367 AT4G34990.1 60.833 120 46 1 1 120 1 119 1.59e-48 164
MsaG025367 AT2G31180.1 63.248 117 42 1 1 117 1 116 1.63e-48 163
MsaG025367 AT4G38620.1 57.500 120 50 1 1 120 1 119 1.74e-48 164
MsaG025367 AT4G09460.1 59.322 118 47 1 1 118 1 117 3.04e-48 162
MsaG025367 AT5G65230.1 61.017 118 45 1 1 118 1 117 3.24e-48 164
MsaG025367 AT1G35515.1 57.500 120 50 1 1 120 1 119 5.78e-48 160
MsaG025367 AT3G28470.1 63.063 111 40 1 1 111 1 110 6.19e-48 163
MsaG025367 AT5G60890.1 62.393 117 43 1 1 117 1 116 7.16e-48 162
MsaG025367 AT1G34670.1 61.864 118 44 1 1 118 1 117 8.33e-48 164
MsaG025367 AT1G74650.1 62.712 118 43 1 1 118 1 117 9.05e-48 163
MsaG025367 AT5G07690.1 62.500 120 44 1 1 120 1 119 1.27e-47 163
MsaG025367 AT5G61420.2 62.712 118 43 1 1 118 1 117 1.66e-47 164
MsaG025367 AT3G28910.1 63.248 117 42 1 1 117 1 116 2.06e-47 162
MsaG025367 AT1G56160.1 60.345 116 45 1 2 117 4 118 2.59e-47 161
MsaG025367 AT1G06180.1 61.983 121 45 1 1 121 1 120 3.06e-47 159
MsaG025367 AT5G10280.1 59.322 118 47 1 1 118 1 117 4.19e-47 162
MsaG025367 AT4G12350.1 61.864 118 44 1 1 118 1 117 6.16e-47 160
MsaG025367 AT1G57560.1 40.870 230 105 5 1 223 1 206 8.74e-47 160
MsaG025367 AT5G62470.1 63.248 117 41 2 1 117 1 115 1.47e-46 161
MsaG025367 AT4G22680.1 46.821 173 72 2 1 173 1 153 1.49e-46 158
MsaG025367 AT3G12820.1 59.322 118 47 1 3 120 5 121 2.23e-46 157
MsaG025367 AT4G01680.3 60.684 117 45 1 1 117 1 116 2.36e-46 157
MsaG025367 AT5G16600.1 43.415 205 93 4 1 186 1 201 4.96e-46 159
MsaG025367 AT5G26660.1 58.333 120 49 1 1 120 1 119 5.89e-46 159
MsaG025367 AT1G18570.1 61.157 121 45 2 1 120 1 120 7.92e-46 159
MsaG025367 AT3G13540.1 58.261 115 47 1 4 118 15 128 8.43e-46 156
MsaG025367 AT2G47460.1 54.688 128 57 1 1 128 1 127 9.89e-46 159
MsaG025367 AT4G01680.1 60.684 117 45 1 1 117 1 116 1.19e-45 158
MsaG025367 AT5G07700.1 47.305 167 83 2 1 163 1 166 4.26e-45 157
MsaG025367 AT5G07700.2 47.305 167 83 2 1 163 1 166 4.26e-45 157
MsaG025367 AT1G57560.2 58.333 120 49 1 1 120 1 119 6.54e-45 154
MsaG025367 AT1G63910.1 52.593 135 63 1 1 135 1 134 1.02e-44 156
MsaG025367 AT5G49330.1 57.265 117 49 1 1 117 1 116 1.60e-44 155
MsaG025367 AT5G54230.1 60.169 118 46 1 1 118 1 117 2.09e-44 154
MsaG025367 AT1G09540.1 58.197 122 48 2 1 122 1 119 4.47e-44 155
MsaG025367 AT1G74080.1 57.500 120 50 1 1 120 1 119 5.06e-44 154
MsaG025367 AT1G66230.1 58.974 117 47 1 1 117 1 116 8.34e-44 152
MsaG025367 AT5G14340.1 56.410 117 50 1 1 117 13 128 1.04e-43 151
MsaG025367 AT5G62320.1 54.472 123 50 1 2 118 3 125 1.38e-43 150
MsaG025367 AT3G13890.2 55.932 118 51 1 1 118 1 117 4.09e-43 152
MsaG025367 AT4G01680.2 55.039 129 45 2 1 117 1 128 1.52e-42 150
MsaG025367 AT1G79180.2 48.993 149 42 2 2 117 4 151 4.64e-42 148
MsaG025367 AT3G12720.1 54.783 115 51 1 6 120 16 129 3.32e-41 145
MsaG025367 AT5G14750.1 54.701 117 52 1 13 129 17 132 3.87e-41 142
MsaG025367 AT5G52600.1 60.185 108 42 1 9 116 9 115 1.97e-40 140
MsaG025367 AT3G13890.1 51.969 127 51 2 1 118 1 126 3.97e-40 144
MsaG025367 AT3G27920.1 57.944 107 44 1 13 119 15 120 8.11e-40 140
MsaG025367 AT1G74430.1 54.167 120 54 1 1 120 1 119 9.85e-40 140
MsaG025367 AT5G12870.1 58.491 106 43 1 12 117 18 122 8.45e-39 139
MsaG025367 AT5G55020.1 57.547 106 44 1 12 117 26 130 1.46e-38 143
MsaG025367 AT5G40330.1 56.190 105 45 1 13 117 13 116 1.66e-38 136
MsaG025367 AT1G18710.1 51.282 117 56 1 1 117 1 116 2.02e-37 134
MsaG025367 AT5G06100.1 55.963 109 47 1 8 116 28 135 2.36e-37 139
MsaG025367 AT2G32460.1 56.190 105 45 1 12 116 18 121 2.73e-37 139
MsaG025367 AT2G32460.2 56.190 105 45 1 12 116 6 109 2.88e-37 139
MsaG025367 AT3G08500.1 56.364 110 47 1 8 117 26 134 3.46e-37 136
MsaG025367 AT5G06100.5 55.963 109 47 1 8 116 28 135 6.86e-37 138
MsaG025367 AT5G06100.2 55.963 109 47 1 8 116 28 135 6.86e-37 138
MsaG025367 AT5G06100.3 55.963 109 47 1 8 116 28 135 6.86e-37 138
MsaG025367 AT5G06100.4 55.963 109 47 1 8 116 28 135 6.86e-37 138
MsaG025367 AT5G35550.1 51.724 116 55 1 9 124 11 125 7.17e-37 133
MsaG025367 AT4G26930.1 55.769 104 45 1 12 115 19 121 1.21e-36 135
MsaG025367 AT3G11440.2 51.852 108 51 1 9 116 38 144 3.49e-36 135
MsaG025367 AT3G27810.1 55.046 109 48 1 9 117 17 124 4.62e-36 130
MsaG025367 AT3G01530.1 50.909 110 53 1 8 117 21 129 9.96e-36 128
MsaG025367 AT3G11440.3 51.852 108 51 1 9 116 38 144 1.33e-35 135
MsaG025367 AT3G11440.4 51.852 108 51 1 9 116 38 144 1.33e-35 135
MsaG025367 AT3G11440.1 51.852 108 51 1 9 116 38 144 1.33e-35 135
MsaG025367 AT4G25560.1 55.963 109 47 1 13 121 11 118 1.73e-35 130
MsaG025367 AT5G52260.1 57.522 113 47 1 9 121 9 120 3.33e-35 129
MsaG025367 AT5G40350.1 53.211 109 50 1 10 118 15 122 5.50e-35 127
MsaG025367 AT1G48000.1 57.798 109 43 2 12 118 32 139 5.80e-35 127
MsaG025367 AT3G48920.1 48.438 128 64 2 9 136 15 140 1.16e-34 127
MsaG025367 AT1G25340.1 56.075 107 46 1 10 116 16 121 1.91e-34 127
MsaG025367 AT2G26960.1 51.402 107 51 1 9 115 17 122 4.48e-34 129
MsaG025367 AT1G66370.1 50.862 116 52 2 1 116 1 111 5.59e-34 125
MsaG025367 AT4G13480.1 45.865 133 69 2 13 145 7 136 6.09e-33 122
MsaG025367 AT3G24310.1 54.808 104 46 1 13 116 19 121 6.41e-33 123
MsaG025367 AT2G47190.1 36.866 217 127 6 8 220 16 226 9.41e-33 122
MsaG025367 AT3G30210.1 40.854 164 87 4 13 167 28 190 1.09e-32 122
MsaG025367 AT1G66380.1 55.238 105 46 1 12 116 8 111 1.16e-32 118
MsaG025367 AT1G68320.1 53.333 105 48 1 12 116 19 122 1.44e-32 122
MsaG025367 AT5G14750.3 57.303 89 35 1 39 127 11 96 8.56e-32 117
MsaG025367 AT3G06490.1 55.556 108 47 1 8 115 15 121 2.02e-31 120
MsaG025367 AT1G66390.1 54.286 105 47 1 12 116 8 111 2.21e-31 118
MsaG025367 AT1G56650.1 54.286 105 47 1 12 116 8 111 4.64e-31 117
MsaG025367 AT5G26660.2 59.756 82 33 0 39 120 7 88 7.16e-31 119
MsaG025367 AT1G25340.2 53.271 107 44 2 10 116 16 116 9.35e-30 114
MsaG025367 AT1G25340.3 53.271 107 44 2 10 116 16 116 1.27e-29 115
MsaG025367 AT3G53200.1 52.381 105 49 1 12 116 9 112 2.52e-29 112
MsaG025367 AT5G49620.1 52.778 108 50 1 8 115 22 128 2.59e-29 114
MsaG025367 AT3G46130.1 46.364 110 58 1 13 122 10 118 8.66e-29 111
MsaG025367 AT5G59780.3 46.364 110 58 1 13 122 9 117 8.83e-29 111
MsaG025367 AT5G35550.2 58.140 86 36 0 39 124 43 128 1.33e-28 111
MsaG025367 AT3G47600.2 65.753 73 25 0 45 117 38 110 7.47e-28 110
MsaG025367 AT2G26950.1 43.750 112 61 2 9 120 13 122 9.85e-28 111
MsaG025367 AT5G67300.1 34.831 178 109 3 10 182 2 177 1.42e-27 109
MsaG025367 AT2G23290.1 51.456 103 48 2 14 116 13 113 1.59e-27 109
MsaG025367 AT3G60460.1 47.222 108 55 2 9 115 8 114 2.94e-27 108
MsaG025367 AT3G27810.2 61.644 73 28 0 45 117 3 75 4.68e-27 105
MsaG025367 AT3G12820.2 61.111 72 28 0 49 120 2 73 6.17e-27 105
MsaG025367 AT3G50060.1 43.511 131 65 3 10 133 2 130 1.08e-26 107
MsaG025367 AT1G18960.1 45.192 104 53 2 14 117 10 109 3.16e-26 105
MsaG025367 AT5G40350.2 58.108 74 31 0 45 118 4 77 5.56e-26 102
MsaG025367 AT4G37260.1 48.544 103 51 2 14 116 13 113 5.81e-26 105
MsaG025367 AT5G49620.2 46.400 125 46 3 8 115 22 142 8.60e-26 105
MsaG025367 AT1G66380.3 63.889 72 26 0 45 116 7 78 1.05e-25 99.4
MsaG025367 AT3G53200.2 61.644 73 28 0 44 116 7 79 1.97e-25 101
MsaG025367 AT5G59780.2 54.430 79 36 0 44 122 18 96 8.52e-25 100
MsaG025367 AT3G46130.4 54.430 79 36 0 44 122 18 96 1.23e-24 100
MsaG025367 AT1G17950.1 44.954 109 56 3 14 122 5 109 1.60e-24 100
MsaG025367 AT3G27785.1 46.296 108 56 2 9 116 184 289 1.96e-24 103
MsaG025367 AT5G58850.1 41.270 126 71 3 11 135 102 225 4.78e-24 102
MsaG025367 AT3G46130.3 54.545 77 35 0 46 122 10 86 5.80e-24 98.2
MsaG025367 AT3G09230.1 45.714 105 55 2 14 118 55 157 9.79e-24 100
MsaG025367 AT5G17800.1 39.516 124 73 2 14 137 93 214 1.29e-23 99.4
MsaG025367 AT3G55730.1 49.515 103 50 2 14 116 56 156 1.72e-23 100
MsaG025367 AT2G39880.1 48.544 103 51 2 14 116 50 150 1.74e-23 99.8
MsaG025367 AT1G69560.1 38.889 126 70 3 9 134 102 220 1.93e-23 99.0
MsaG025367 AT1G69560.2 38.889 126 70 3 9 134 118 236 2.27e-23 99.0
MsaG025367 AT5G40360.1 42.241 116 64 3 12 127 156 268 3.56e-23 98.6
MsaG025367 AT2G25230.1 46.602 103 53 2 9 111 21 121 5.41e-23 95.5
MsaG025367 AT1G22640.3 38.983 118 57 1 59 176 1 103 5.15e-22 92.0
MsaG025367 AT4G18770.1 42.202 109 61 2 9 117 212 318 1.01e-21 95.1
MsaG025367 AT1G73410.2 31.527 203 124 5 14 211 6 198 1.13e-21 91.3
MsaG025367 AT5G14750.4 55.072 69 31 0 59 127 1 69 1.20e-21 89.4
MsaG025367 AT5G14750.2 55.072 69 31 0 59 127 1 69 1.20e-21 89.4
MsaG025367 AT1G26780.1 38.211 123 70 3 14 136 98 214 3.61e-21 91.7
MsaG025367 AT1G73410.1 46.602 103 53 2 14 116 6 106 6.31e-21 90.1
MsaG025367 AT1G26780.2 28.794 257 144 8 14 267 98 318 6.68e-21 92.4
MsaG025367 AT5G11050.1 38.983 118 68 3 11 128 102 215 7.01e-21 92.8
MsaG025367 AT3G09370.2 44.660 103 55 2 14 116 135 235 8.91e-21 93.2
MsaG025367 AT3G09370.1 44.660 103 55 2 14 116 130 230 9.73e-21 92.8
MsaG025367 AT1G71030.2 53.731 67 31 0 52 118 5 71 1.13e-20 88.2
MsaG025367 AT3G09370.3 44.660 103 55 2 14 116 143 243 1.13e-20 92.8
MsaG025367 AT1G71030.1 53.731 67 31 0 52 118 19 85 1.28e-20 88.2
MsaG025367 AT3G23250.2 62.712 59 22 0 59 117 1 59 3.77e-20 87.8
MsaG025367 AT4G33450.1 40.741 108 62 2 9 116 14 119 6.47e-20 87.8
MsaG025367 AT5G02320.3 42.308 104 58 2 14 117 67 168 1.56e-19 89.4
MsaG025367 AT5G02320.3 34.653 101 63 3 14 113 15 113 5.41e-11 63.5
MsaG025367 AT5G02320.1 42.308 104 58 2 14 117 127 228 1.60e-19 89.4
MsaG025367 AT5G02320.1 34.653 101 63 3 14 113 75 173 5.45e-11 63.9
MsaG025367 AT5G02320.2 42.308 104 58 2 14 117 127 228 1.60e-19 89.4
MsaG025367 AT5G02320.2 34.653 101 63 3 14 113 75 173 5.45e-11 63.9
MsaG025367 AT5G40430.1 35.938 128 72 3 9 136 49 166 1.03e-18 84.3
MsaG025367 AT2G02820.3 39.496 119 64 3 17 135 33 143 1.37e-18 85.5
MsaG025367 AT2G02820.1 39.496 119 64 3 17 135 33 143 2.21e-18 85.9
MsaG025367 AT2G02820.2 39.496 119 64 3 17 135 33 143 3.04e-18 85.5
MsaG025367 AT4G32730.1 40.385 104 60 2 14 117 87 188 6.62e-18 84.7
MsaG025367 AT4G32730.5 40.385 104 60 2 14 117 87 188 6.76e-18 85.1
MsaG025367 AT4G32730.4 40.385 104 60 2 14 117 87 188 6.76e-18 85.1
MsaG025367 AT4G32730.3 40.385 104 60 2 14 117 87 188 6.76e-18 85.1
MsaG025367 AT4G32730.2 40.385 104 60 2 14 117 87 188 6.76e-18 85.1
MsaG025367 AT3G29020.1 36.538 104 64 2 14 117 65 166 8.96e-18 81.3
MsaG025367 AT1G66380.2 46.341 82 43 1 12 93 8 88 9.93e-18 77.8
MsaG025367 AT3G29020.2 33.071 127 77 3 14 140 67 185 1.34e-17 82.0
MsaG025367 AT5G11510.3 39.423 104 61 2 14 117 81 182 2.09e-17 83.6
MsaG025367 AT5G11510.1 39.423 104 61 2 14 117 81 182 2.09e-17 83.6
MsaG025367 AT5G11510.4 39.423 104 61 2 14 117 81 182 2.09e-17 83.6
MsaG025367 AT5G11510.5 39.423 104 61 2 14 117 81 182 2.20e-17 83.2
MsaG025367 AT5G11510.2 39.423 104 61 2 14 117 81 182 2.23e-17 83.2
MsaG025367 AT2G37630.1 38.938 113 62 4 17 127 7 114 2.31e-16 79.3
MsaG025367 AT1G14350.2 42.000 100 56 2 17 116 28 125 4.79e-16 79.0
MsaG025367 AT1G14350.1 42.000 100 56 2 17 116 28 125 4.79e-16 79.0
MsaG025367 AT4G00540.2 40.179 112 56 3 12 117 101 207 2.36e-15 76.6
MsaG025367 AT4G00540.1 40.179 112 56 3 12 117 99 205 3.49e-15 76.3
MsaG025367 AT5G39700.1 34.513 113 71 3 9 121 51 160 9.66e-14 69.3
MsaG025367 AT4G25560.2 56.000 50 22 0 72 121 3 52 4.64e-12 65.1
MsaG025367 AT3G18100.3 36.735 98 60 2 12 109 496 591 7.15e-11 63.5
MsaG025367 AT3G18100.1 36.735 98 60 2 12 109 544 639 8.57e-11 63.5
MsaG025367 AT3G18100.4 36.735 98 60 2 12 109 383 478 8.71e-11 63.2
MsaG025367 AT3G18100.2 36.735 98 60 2 12 109 331 426 8.90e-11 63.2
MsaG025367 AT5G59780.1 51.020 49 24 0 74 122 4 52 9.22e-11 60.5

Find 67 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCCACCATGTTTAATATT+TGG 0.164222 5:-7416413 None:intergenic
TTTGAGGAGTCTAGGTATTT+TGG 0.172232 5:+7417378 MsaT025367.1:CDS
GTATTACTTTCCATGGAAAA+AGG 0.187062 5:-7417075 None:intergenic
ATATGAGTTCAGCTCCTTAT+TGG 0.208038 5:+7416929 MsaT025367.1:CDS
AGAACAATTGATGGTTTATA+TGG 0.249714 5:+7417210 MsaT025367.1:CDS
GTTCATATCATAATCAATTA+TGG 0.256120 5:-7416995 None:intergenic
TTGGAATGCAAATGCAATAA+AGG 0.260472 5:+7417397 MsaT025367.1:CDS
GAATTTGATGGTGGCGGCTT+CGG 0.274867 5:+7416897 MsaT025367.1:CDS
AATTTGATGGTGGCGGCTTC+GGG 0.281895 5:+7416898 MsaT025367.1:CDS
AAAATGGTACTGGTGGAAAT+TGG 0.309864 5:+7416134 MsaT025367.1:CDS
TTCTATCCATTATTTGTTGT+TGG 0.313622 5:-7417191 None:intergenic
TGTGAACCAACAACAAATAA+TGG 0.320313 5:+7417185 MsaT025367.1:CDS
TTGGGGAGATATGAACTCTT+TGG 0.325613 5:+7417299 MsaT025367.1:CDS
ATTATGGATGAATTTGAAAC+TGG 0.368691 5:-7416979 None:intergenic
GAATACTCTGCAGGCCAATA+AGG 0.382763 5:-7416943 None:intergenic
GGAATGTTCATTATGCTTGT+TGG 0.391809 5:-7417048 None:intergenic
CTTGTTTCATGTTGCTAACT+CGG 0.393201 5:-7416852 None:intergenic
AATAATGTCGTCTTCTTCTT+CGG 0.393994 5:-7416438 None:intergenic
CTTGTGGAATTGATCCTTGT+TGG 0.404625 5:-7417344 None:intergenic
GGAAAAGCTGTCGTCTTAGA+TGG 0.410472 5:+7416375 MsaT025367.1:CDS
CAGCCATCACATATATTTCA+AGG 0.414160 5:+7417123 MsaT025367.1:CDS
ATAATGGATAGAACAATTGA+TGG 0.418211 5:+7417201 MsaT025367.1:CDS
AAGTCTTACATAGAACAAAA+TGG 0.418654 5:+7416118 MsaT025367.1:CDS
TTCAACAGAAAGCACTAGTT+GGG 0.432311 5:+7417281 MsaT025367.1:CDS
GCTCCTTCCTTTGTTTCCCT+AGG 0.440207 5:-7416807 None:intergenic
TGTAATTGTATTACTTTCCA+TGG 0.441381 5:-7417082 None:intergenic
AATTGATGGTTTATATGGAA+TGG 0.453337 5:+7417215 MsaT025367.1:CDS
CTTCAACAGAAAGCACTAGT+TGG 0.476988 5:+7417280 MsaT025367.1:CDS
ATTGCTCTACCTCAAAAGAT+AGG 0.485817 5:+7416157 MsaT025367.1:CDS
AGAAATAAATCAGAATTTGA+TGG 0.487396 5:+7416885 MsaT025367.1:CDS
ATAATGATATAAAGAACTAC+TGG 0.487898 5:+7416761 MsaT025367.1:CDS
ACAAGCTCACTTAAATCCCT+TGG 0.501931 5:-7417159 None:intergenic
AGGTTGAAGAAGAAGCTCCT+AGG 0.505164 5:+7416790 MsaT025367.1:CDS
TACATAGAACAAAATGGTAC+TGG 0.506829 5:+7416124 MsaT025367.1:CDS
AAATCAGAATTTGATGGTGG+CGG 0.512314 5:+7416891 MsaT025367.1:CDS
GCATCTTCTTCAGGTGACCA+TGG 0.528317 5:-7416088 None:intergenic
TCTTTGGTTTATGACTATGA+AGG 0.535991 5:+7417315 MsaT025367.1:CDS
AGAAGCTCCTAGGGAAACAA+AGG 0.537486 5:+7416800 MsaT025367.1:CDS
TCTATGTTAGCATCGGAAGC+AGG 0.539728 5:+7416468 MsaT025367.1:CDS
TGCAGCCTCTATGTTAGCAT+CGG 0.545351 5:+7416461 MsaT025367.1:CDS
ATATCATTATCCGTTCGTCC+TGG 0.550639 5:-7416748 None:intergenic
GGTTGAAGAAGAAGCTCCTA+GGG 0.559381 5:+7416791 MsaT025367.1:CDS
GGATGAACAGAATACTCTGC+AGG 0.563118 5:-7416952 None:intergenic
TAAAGAACTACTGGAACACT+AGG 0.569888 5:+7416770 MsaT025367.1:CDS
TCAAAAGCAATAGCATCTTG+TGG 0.572148 5:-7417360 None:intergenic
ATCATAGCAGCACAATTACC+AGG 0.572301 5:+7416730 MsaT025367.1:CDS
AGCCATCACATATATTTCAA+GGG 0.573988 5:+7417124 MsaT025367.1:CDS
ATCCAGGACTTAAGAGATGT+GGG 0.582703 5:+7416354 MsaT025367.1:intron
CTTAGACCAAATATTAAACA+TGG 0.584666 5:+7416407 MsaT025367.1:CDS
TATGAAGGTTGTTGCCAACA+AGG 0.584761 5:+7417330 MsaT025367.1:CDS
ATAGAACAAAATGGTACTGG+TGG 0.585934 5:+7416127 MsaT025367.1:CDS
CTTGAAATATATGTGATGGC+TGG 0.591282 5:-7417122 None:intergenic
TGCTTCCGATGCTAACATAG+AGG 0.594035 5:-7416466 None:intergenic
AGTAATACAATTACAAACAA+TGG 0.598309 5:+7417090 MsaT025367.1:CDS
TCTATTGACATGAGCAATGG+TGG 0.599559 5:+7417240 MsaT025367.1:CDS
GATCCAGGACTTAAGAGATG+TGG 0.613640 5:+7416353 MsaT025367.1:intron
AGCACAATTACCAGGACGAA+CGG 0.615114 5:+7416738 MsaT025367.1:CDS
ACATTGGCTTTGTCACAGCA+AGG 0.615641 5:-7416055 None:intergenic
AATACAATTACAAACAATGG+TGG 0.622206 5:+7417093 MsaT025367.1:CDS
AACCCTTGAAATATATGTGA+TGG 0.624141 5:-7417126 None:intergenic
GATGAATTTGAAACTGGCAT+AGG 0.626545 5:-7416973 None:intergenic
GCTCCTAGGGAAACAAAGGA+AGG 0.637380 5:+7416804 MsaT025367.1:CDS
AATAAATCAGAATTTGATGG+TGG 0.642797 5:+7416888 MsaT025367.1:CDS
GAATCTATTGACATGAGCAA+TGG 0.644932 5:+7417237 MsaT025367.1:CDS
AGACCAAATATTAAACATGG+TGG 0.648958 5:+7416410 MsaT025367.1:CDS
TGGATGAAGCAAGCTTGTGA+AGG 0.667571 5:-7417028 None:intergenic
TCAACAGAAAGCACTAGTTG+GGG 0.700480 5:+7417282 MsaT025367.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 7416043 7417416 7416043 ID=MsaG025367
Chr5 mRNA 7416043 7417416 7416043 ID=MsaT025367.1;Parent=MsaG025367
Chr5 exon 7416043 7416178 7416043 ID=MsaT025367.1.exon1;Parent=MsaT025367.1
Chr5 CDS 7416043 7416178 7416043 ID=cds.MsaT025367.1;Parent=MsaT025367.1
Chr5 exon 7416360 7416489 7416360 ID=MsaT025367.1.exon2;Parent=MsaT025367.1
Chr5 CDS 7416360 7416489 7416360 ID=cds.MsaT025367.1;Parent=MsaT025367.1
Chr5 exon 7416723 7417416 7416723 ID=MsaT025367.1.exon3;Parent=MsaT025367.1
Chr5 CDS 7416723 7417416 7416723 ID=cds.MsaT025367.1;Parent=MsaT025367.1
Gene Sequence

>MsaT025367.1

ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAAAAAGGTCCATGGTCACCTGAAGAAGATGCAAAACTCAAGTCTTACATAGAACAAAATGGTACTGGTGGAAATTGGATTGCTCTACCTCAAAAGATAGGACTTAAGAGATGTGGGAAAAGCTGTCGTCTTAGATGGTTAAATTATCTTAGACCAAATATTAAACATGGTGGCTTCTCCGAAGAAGAAGACGACATTATTTGCAGCCTCTATGTTAGCATCGGAAGCAGGTGGTCTATCATAGCAGCACAATTACCAGGACGAACGGATAATGATATAAAGAACTACTGGAACACTAGGTTGAAGAAGAAGCTCCTAGGGAAACAAAGGAAGGAGCAACAAGCTCAAGCACAAGCTCGCCGAGTTAGCAACATGAAACAAGAGATGAAAAGAGAAATAAATCAGAATTTGATGGTGGCGGCTTCGGGTGTCAATAATATGAGTTCAGCTCCTTATTGGCCTGCAGAGTATTCTGTTCATCCTATGCCAGTTTCAAATTCATCCATAATTGATTATGATATGAACAATCAAACATCCTTCACAAGCTTGCTTCATCCAACAAGCATAATGAACATTCCAAACCCTTTTTCCATGGAAAGTAATACAATTACAAACAATGGTGGAAATTGCCAGCCATCACATATATTTCAAGGGTTTGAAAATTTTCCAAGGGATTTAAGTGAGCTTGTATGTGTGAACCAACAACAAATAATGGATAGAACAATTGATGGTTTATATGGAATGGAATCTATTGACATGAGCAATGGTGGTAGCACAATCACAACAACTTCAACAGAAAGCACTAGTTGGGGAGATATGAACTCTTTGGTTTATGACTATGAAGGTTGTTGCCAACAAGGATCAATTCCACAAGATGCTATTGCTTTTGAGGAGTCTAGGTATTTTGGAATGCAAATGCAATAA
Protein sequence

>MsaT025367.1

MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDDIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQAQARRVSNMKQEMKREINQNLMVAASGVNNMSSAPYWPAEYSVHPMPVSNSSIIDYDMNNQTSFTSLLHPTSIMNIPNPFSMESNTITNNGGNCQPSHIFQGFENFPRDLSELVCVNQQQIMDRTIDGLYGMESIDMSNGGSTITTTSTESTSWGDMNSLVYDYEGCCQQGSIPQDAIAFEESRYFGMQMQ*