AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025409

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025409 MtrunA17_Chr5g0401371 97.343 414 7 1 1 410 1 414 0.0 835
MsaG025409 MtrunA17_Chr4g0053951 75.822 426 80 4 1 410 1 419 0.0 621
MsaG025409 MtrunA17_Chr4g0053821 78.237 363 77 1 47 409 27 387 0.0 565
MsaG025409 MtrunA17_Chr1g0187371 29.595 321 187 9 99 397 6 309 7.42e-40 144
MsaG025409 MtrunA17_Chr8g0350311 32.581 310 178 12 111 405 139 432 1.35e-39 147
MsaG025409 MtrunA17_Chr4g0002001 29.412 323 186 9 109 403 2 310 5.43e-39 142
MsaG025409 MtrunA17_Chr8g0387401 30.492 305 181 8 114 402 55 344 1.51e-38 142
MsaG025409 MtrunA17_Chr2g0320011 32.131 305 178 12 110 400 87 376 2.48e-37 140
MsaG025409 MtrunA17_Chr2g0284091 31.148 305 181 10 110 400 39 328 3.12e-37 139
MsaG025409 MtrunA17_Chr8g0348481 28.947 304 185 9 114 401 40 328 4.55e-36 135
MsaG025409 MtrunA17_Chr1g0194201 31.715 309 182 12 110 404 74 367 6.57e-36 136
MsaG025409 MtrunA17_Chr8g0378831 32.226 301 176 12 111 396 32 319 1.27e-35 134
MsaG025409 MtrunA17_Chr3g0141871 31.494 308 185 11 111 404 32 327 1.41e-35 134
MsaG025409 MtrunA17_Chr7g0248461 28.947 304 185 9 114 401 41 329 1.66e-35 134
MsaG025409 MtrunA17_Chr4g0030231 29.373 303 181 10 114 399 43 329 3.51e-35 133
MsaG025409 MtrunA17_Chr6g0453711 32.899 307 173 12 109 399 108 397 1.12e-34 135
MsaG025409 MtrunA17_Chr2g0277011 31.056 322 190 12 100 404 76 382 2.28e-34 132
MsaG025409 MtrunA17_Chr7g0270371 31.068 309 184 12 110 404 74 367 4.01e-34 131
MsaG025409 MtrunA17_Chr5g0397261 28.618 304 186 10 114 401 44 332 4.97e-34 130
MsaG025409 MtrunA17_Chr4g0051261 28.618 304 191 10 109 400 2 291 5.36e-34 128
MsaG025409 MtrunA17_Chr4g0045841 29.431 299 183 10 117 401 61 345 7.21e-34 130
MsaG025409 MtrunA17_Chr2g0293491 28.618 304 191 10 109 400 2 291 1.34e-33 127
MsaG025409 MtrunA17_Chr4g0030151 30.822 292 179 9 117 396 45 325 1.84e-33 128
MsaG025409 MtrunA17_Chr8g0358921 28.754 313 178 9 109 397 45 336 2.23e-33 128
MsaG025409 MtrunA17_Chr7g0246591 29.677 310 179 13 111 401 141 430 2.63e-33 130
MsaG025409 MtrunA17_Chr7g0273601 30.667 300 185 10 109 397 105 392 3.44e-33 130
MsaG025409 MtrunA17_Chr4g0061141 30.537 298 186 9 109 396 103 389 4.97e-33 131
MsaG025409 MtrunA17_Chr3g0099951 31.023 303 182 11 109 399 12 299 5.37e-33 128
MsaG025409 MtrunA17_Chr3g0131861 30.333 300 186 11 109 397 95 382 5.70e-33 130
MsaG025409 MtrunA17_Chr1g0193081 30.645 310 184 13 110 404 74 367 8.56e-33 127
MsaG025409 MtrunA17_Chr6g0483151 29.766 299 185 10 109 397 12 295 1.14e-32 127
MsaG025409 MtrunA17_Chr2g0317501 29.801 302 185 12 109 397 132 419 2.62e-32 129
MsaG025409 MtrunA17_Chr1g0191221 30.769 299 186 10 109 397 120 407 3.17e-32 128
MsaG025409 MtrunA17_Chr7g0218071 31.613 310 170 12 109 397 118 406 1.95e-31 126
MsaG025409 MtrunA17_Chr1g0201571 32.889 225 138 6 109 323 124 345 2.12e-31 125
MsaG025409 MtrunA17_Chr6g0482681 31.861 317 190 11 103 403 81 387 3.21e-30 122
MsaG025409 MtrunA17_Chr2g0286421 29.000 300 190 10 109 397 100 387 6.23e-30 121
MsaG025409 MtrunA17_Chr4g0065851 29.904 311 192 11 103 397 17 317 6.33e-30 121
MsaG025409 MtrunA17_Chr8g0392811 29.022 317 199 11 103 403 109 415 8.02e-30 121
MsaG025409 MtrunA17_Chr5g0409421 27.483 302 185 10 109 396 2 283 9.29e-30 119
MsaG025409 MtrunA17_Chr5g0443351 30.938 320 187 12 104 403 15 320 9.36e-30 120
MsaG025409 MtrunA17_Chr8g0385971 30.033 303 183 12 109 397 88 375 1.91e-29 120
MsaG025409 MtrunA17_Chr2g0287271 29.338 317 198 11 103 403 17 323 1.95e-29 120
MsaG025409 MtrunA17_Chr3g0130781 27.536 345 185 14 104 402 13 338 2.37e-29 119
MsaG025409 MtrunA17_Chr4g0040141 29.667 300 186 10 109 396 127 413 2.65e-29 120
MsaG025409 MtrunA17_Chr3g0102571 26.933 375 205 12 81 396 2 366 4.07e-29 117
MsaG025409 MtrunA17_Chr4g0066691 28.000 300 193 10 109 397 102 389 8.43e-29 118
MsaG025409 MtrunA17_Chr5g0396361 29.967 307 178 12 109 397 138 425 9.88e-29 118
MsaG025409 MtrunA17_Chr2g0324461 30.405 296 177 11 116 397 146 426 2.57e-28 117
MsaG025409 MtrunA17_Chr8g0359091 29.781 319 194 11 103 403 18 324 3.66e-28 116
MsaG025409 MtrunA17_Chr3g0096631 30.380 316 194 11 104 403 18 323 4.68e-28 116
MsaG025409 MtrunA17_Chr8g0383451 35.455 220 123 7 117 323 4 217 7.43e-28 114
MsaG025409 MtrunA17_Chr7g0274941 26.821 302 174 9 104 395 9 273 1.08e-26 108
MsaG025409 MtrunA17_Chr8g0377071 29.545 308 189 12 109 399 383 679 1.14e-26 112
MsaG025409 MtrunA17_Chr8g0369451 25.828 302 190 10 109 396 2 283 1.66e-26 110
MsaG025409 MtrunA17_Chr3g0122781 27.500 320 195 12 109 399 414 725 2.50e-26 111
MsaG025409 MtrunA17_Chr8g0339221 26.531 294 197 8 111 397 4 285 1.62e-25 107
MsaG025409 MtrunA17_Chr3g0093391 28.435 313 188 13 109 396 21 322 2.34e-25 107
MsaG025409 MtrunA17_Chr7g0256001 24.634 410 233 14 5 396 52 403 2.39e-25 108
MsaG025409 MtrunA17_Chr3g0093571 29.338 317 180 15 109 396 23 324 3.72e-25 107
MsaG025409 MtrunA17_Chr3g0127571 26.797 306 171 10 111 401 138 405 4.37e-25 107
MsaG025409 MtrunA17_Chr3g0102601 34.343 198 104 6 200 396 32 204 5.75e-25 102
MsaG025409 MtrunA17_Chr4g0057791 30.000 200 125 6 204 396 320 511 2.89e-23 101
MsaG025409 MtrunA17_Chr7g0276111 25.914 301 170 10 111 396 144 406 3.70e-23 101
MsaG025409 MtrunA17_Chr4g0030241 37.190 121 72 3 204 323 3 120 4.40e-23 95.5
MsaG025409 MtrunA17_Chr2g0314321 28.107 338 188 12 105 403 19 340 4.72e-23 101
MsaG025409 MtrunA17_Chr8g0374701 24.802 379 213 14 45 396 57 390 5.16e-23 101
MsaG025409 MtrunA17_Chr4g0045261 25.574 305 171 10 112 401 138 401 1.62e-22 99.8
MsaG025409 MtrunA17_Chr1g0190131 25.510 294 173 9 111 396 9 264 2.44e-22 95.9
MsaG025409 MtrunA17_Chr5g0405421 26.667 300 165 10 111 395 99 358 2.92e-21 95.9
MsaG025409 MtrunA17_Chr5g0402551 25.405 370 199 15 50 396 81 396 9.74e-21 94.4
MsaG025409 MtrunA17_Chr5g0441691 24.302 358 192 13 52 396 35 326 1.62e-20 93.6
MsaG025409 MtrunA17_Chr5g0444171 23.724 333 186 12 86 402 76 356 8.46e-20 91.7
MsaG025409 MtrunA17_Chr1g0173541 25.246 305 175 10 111 402 52 316 1.60e-19 90.5
MsaG025409 MtrunA17_Chr1g0203881 25.984 254 145 8 148 396 84 299 2.99e-19 89.7
MsaG025409 MtrunA17_Chr7g0257751 25.163 306 174 10 111 402 58 322 3.58e-19 89.7
MsaG025409 MtrunA17_Chr4g0074791 25.348 359 193 14 52 396 57 354 3.65e-19 89.4
MsaG025409 MtrunA17_Chr1g0200601 25.914 301 172 10 108 396 27 288 5.47e-19 89.0
MsaG025409 MtrunA17_Chr3g0098951 24.390 369 201 14 44 396 36 342 6.69e-19 88.6
MsaG025409 MtrunA17_Chr4g0059951 23.794 311 182 9 108 404 70 339 1.08e-18 88.2
MsaG025409 MtrunA17_Chr4g0074811 25.753 299 169 9 111 396 91 349 1.31e-18 87.8
MsaG025409 MtrunA17_Chr8g0385341 25.828 302 165 10 111 396 30 288 1.85e-18 87.4
MsaG025409 MtrunA17_Chr8g0384301 23.856 306 179 9 115 409 303 565 2.21e-18 87.4
MsaG025409 MtrunA17_Chr0c02g0489761 25.352 355 181 14 56 396 52 336 2.28e-18 87.0
MsaG025409 MtrunA17_Chr1g0157131 25.084 299 171 10 111 396 74 332 2.75e-18 86.7
MsaG025409 MtrunA17_Chr4g0008561 25.084 299 176 8 110 398 18 278 4.87e-18 86.7
MsaG025409 MtrunA17_Chr3g0131181 25.333 300 169 9 111 396 29 287 6.01e-18 85.9
MsaG025409 MtrunA17_Chr7g0245031 31.132 212 126 8 109 308 146 349 8.24e-18 85.1
MsaG025409 MtrunA17_Chr3g0130151 25.397 252 166 8 115 355 248 488 1.20e-17 85.1
MsaG025409 MtrunA17_Chr4g0001331 25.667 300 168 11 109 396 18 274 1.22e-17 84.7
MsaG025409 MtrunA17_Chr7g0267771 25.573 262 152 8 139 395 122 345 2.20e-17 84.0
MsaG025409 MtrunA17_Chr8g0346081 29.268 205 129 7 111 304 17 216 4.76e-17 82.8
MsaG025409 MtrunA17_Chr8g0346071 30.097 206 126 8 111 304 17 216 6.13e-17 82.4
MsaG025409 MtrunA17_Chr8g0387671 25.424 295 167 11 115 396 70 324 7.13e-17 82.4
MsaG025409 MtrunA17_Chr4g0063881 30.542 203 129 7 111 304 11 210 8.61e-17 82.0
MsaG025409 MtrunA17_Chr7g0267751 23.507 268 152 9 139 396 169 393 1.42e-16 81.6
MsaG025409 MtrunA17_Chr1g0170281 23.235 340 193 12 73 396 89 376 4.43e-16 80.1
MsaG025409 MtrunA17_Chr3g0132591 23.432 303 185 10 101 396 98 360 4.53e-16 79.7
MsaG025409 MtrunA17_Chr4g0013131 30.918 207 124 9 111 304 12 212 4.58e-16 79.7
MsaG025409 MtrunA17_Chr1g0205421 27.143 210 134 9 109 305 10 213 5.08e-16 79.7
MsaG025409 MtrunA17_Chr7g0242561 22.654 309 184 9 108 402 53 320 5.31e-16 79.7
MsaG025409 MtrunA17_Chr3g0116701 24.324 333 198 14 111 396 94 419 7.73e-16 79.0
MsaG025409 MtrunA17_Chr7g0272841 25.490 306 152 12 117 395 74 330 8.04e-16 79.7
MsaG025409 MtrunA17_Chr4g0033371 27.014 211 133 6 109 305 70 273 8.50e-16 79.3
MsaG025409 MtrunA17_Chr2g0286501 30.275 218 135 10 109 316 47 257 8.72e-16 79.7
MsaG025409 MtrunA17_Chr4g0059751 27.230 213 134 7 110 306 88 295 2.36e-15 77.4
MsaG025409 MtrunA17_Chr1g0170551 29.956 227 135 10 106 319 2 217 2.66e-15 78.2
MsaG025409 MtrunA17_Chr8g0386981 24.759 311 171 13 117 407 414 681 2.76e-15 78.2
MsaG025409 MtrunA17_Chr3g0140631 25.080 311 169 13 109 405 35 295 3.32e-15 75.9
MsaG025409 MtrunA17_Chr5g0441011 29.327 208 127 9 111 304 13 214 5.10e-15 76.6
MsaG025409 MtrunA17_Chr8g0351491 26.923 208 130 8 109 304 14 211 8.97e-15 74.3
MsaG025409 MtrunA17_Chr8g0390341 34.328 134 81 3 264 397 288 414 9.28e-15 75.9
MsaG025409 MtrunA17_Chr1g0210061 26.036 338 176 14 111 396 610 925 1.77e-14 75.5
MsaG025409 MtrunA17_Chr6g0453681 24.749 299 168 10 110 396 18 271 2.03e-14 74.7
MsaG025409 MtrunA17_Chr6g0468751 24.749 299 168 10 110 396 18 271 2.06e-14 74.7
MsaG025409 MtrunA17_Chr2g0284031 29.952 207 126 9 111 304 31 231 2.32e-14 74.7
MsaG025409 MtrunA17_Chr5g0432471 26.699 206 134 8 111 304 12 212 2.88e-14 74.3
MsaG025409 MtrunA17_Chr2g0333821 28.095 210 130 9 109 304 12 214 3.34e-14 73.9
MsaG025409 MtrunA17_Chr8g0353621 23.856 306 173 13 109 402 8 265 3.64e-14 72.4
MsaG025409 MtrunA17_Chr5g0397101 23.411 299 176 11 111 396 67 325 4.59e-14 73.9
MsaG025409 MtrunA17_Chr3g0129721 29.004 231 147 11 99 317 11 236 5.90e-14 72.0
MsaG025409 MtrunA17_Chr2g0284011 27.391 230 143 10 111 327 12 230 8.64e-14 72.8
MsaG025409 MtrunA17_Chr1g0190831 25.547 274 173 9 109 359 2 267 1.51e-13 72.4
MsaG025409 MtrunA17_Chr4g0038501 23.397 312 184 12 109 408 18 286 1.53e-13 72.8
MsaG025409 MtrunA17_Chr4g0074111 27.397 219 137 11 111 317 18 226 1.80e-13 71.6
MsaG025409 MtrunA17_Chr4g0038091 24.127 315 178 13 109 408 18 286 2.19e-13 72.4
MsaG025409 MtrunA17_Chr1g0205931 25.991 227 137 11 117 323 61 276 2.48e-13 71.6
MsaG025409 MtrunA17_Chr1g0188031 27.053 207 135 7 111 304 20 223 3.56e-13 70.9
MsaG025409 MtrunA17_Chr3g0107011 26.699 206 134 9 111 304 14 214 4.05e-13 70.9
MsaG025409 MtrunA17_Chr1g0150321 23.490 298 173 12 111 396 13 267 4.10e-13 70.5
MsaG025409 MtrunA17_Chr5g0402601 25.342 292 172 14 52 321 325 592 4.14e-13 71.2
MsaG025409 MtrunA17_Chr2g0304111 27.523 218 140 10 111 316 23 234 5.38e-13 70.5
MsaG025409 MtrunA17_Chr3g0125381 25.207 242 137 9 164 401 10 211 5.55e-13 67.8
MsaG025409 MtrunA17_Chr1g0185221 26.577 222 150 7 109 321 2 219 6.15e-13 70.5
MsaG025409 MtrunA17_Chr5g0428031 26.829 205 134 7 111 304 9 208 6.72e-13 70.1
MsaG025409 MtrunA17_Chr6g0486031 32.836 134 83 3 264 397 275 401 7.48e-13 69.7
MsaG025409 MtrunA17_Chr1g0166101 27.014 211 128 8 111 304 24 225 9.38e-13 69.3
MsaG025409 MtrunA17_Chr3g0091281 24.272 206 140 7 111 305 12 212 1.04e-12 67.4
MsaG025409 MtrunA17_Chr3g0114511 24.390 205 140 7 111 305 32 231 1.04e-12 69.3
MsaG025409 MtrunA17_Chr8g0379091 29.327 208 126 10 111 304 26 226 2.39e-12 68.6
MsaG025409 MtrunA17_Chr4g0025041 24.825 286 170 10 117 399 9 252 3.60e-12 67.4
MsaG025409 MtrunA17_Chr7g0244521 26.577 222 143 10 111 319 12 226 6.16e-12 67.0
MsaG025409 MtrunA17_Chr7g0258051 25.431 232 160 7 97 319 2 229 8.96e-12 67.0
MsaG025409 MtrunA17_Chr1g0188991 29.327 208 130 10 110 304 14 217 1.39e-11 66.2
MsaG025409 MtrunA17_Chr3g0132671 22.222 234 139 6 110 304 18 247 2.79e-11 65.1
MsaG025409 MtrunA17_Chr3g0091421 23.786 206 141 7 111 305 12 212 4.26e-11 62.8
MsaG025409 MtrunA17_Chr2g0317001 23.000 200 146 5 111 304 15 212 4.45e-11 64.7
MsaG025409 MtrunA17_Chr5g0432491 26.923 208 132 8 111 304 23 224 4.71e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025409 AT2G23070.1 80.000 380 65 1 39 407 49 428 0.0 595
MsaG025409 AT3G50000.1 83.988 331 53 0 79 409 72 402 0.0 557
MsaG025409 AT5G67380.1 82.335 334 59 0 77 410 76 409 0.0 553
MsaG025409 AT2G23080.1 81.873 331 60 0 79 409 2 332 0.0 537
MsaG025409 AT5G67380.2 74.551 334 52 1 77 410 76 376 0.0 521
MsaG025409 AT2G23080.2 81.145 297 56 0 79 375 2 298 4.91e-169 476
MsaG025409 AT2G30980.1 30.585 376 222 14 52 404 5 364 1.15e-40 149
MsaG025409 AT3G61160.1 31.922 307 184 11 111 405 102 395 8.89e-40 147
MsaG025409 AT3G61160.4 31.922 307 184 11 111 405 102 395 1.01e-39 147
MsaG025409 AT3G61160.2 31.922 307 184 11 111 405 109 402 1.24e-39 147
MsaG025409 AT1G76540.1 30.063 316 172 11 109 397 12 305 1.37e-39 144
MsaG025409 AT1G06390.2 32.566 304 178 10 110 400 69 358 1.57e-39 146
MsaG025409 AT1G06390.1 32.566 304 178 10 110 400 69 358 1.57e-39 146
MsaG025409 AT1G20930.1 29.688 320 182 10 109 404 14 314 3.37e-39 143
MsaG025409 AT3G48750.1 31.894 301 177 11 109 396 2 287 1.01e-38 141
MsaG025409 AT1G73690.1 31.023 303 176 11 109 397 9 292 9.28e-38 141
MsaG025409 AT4G00720.1 32.039 309 181 12 111 405 138 431 4.22e-37 140
MsaG025409 AT2G38620.2 28.875 329 180 10 109 403 2 310 5.02e-37 137
MsaG025409 AT3G54180.1 28.302 318 194 7 109 403 2 308 6.82e-37 137
MsaG025409 AT4G18710.1 31.908 304 180 10 110 400 39 328 8.98e-37 138
MsaG025409 AT3G59790.1 32.776 299 171 11 114 397 63 346 1.60e-36 137
MsaG025409 AT1G10210.2 31.561 301 184 11 111 399 32 322 3.58e-36 136
MsaG025409 AT1G10210.3 31.561 301 184 11 111 399 32 322 3.58e-36 136
MsaG025409 AT1G10210.1 31.561 301 184 11 111 399 32 322 3.58e-36 136
MsaG025409 AT4G01370.1 28.852 305 184 10 114 401 46 334 2.70e-35 134
MsaG025409 AT4G11330.1 28.852 305 184 10 114 401 46 334 7.87e-35 132
MsaG025409 AT5G14640.1 31.046 306 182 11 110 401 73 363 9.75e-35 133
MsaG025409 AT5G14640.2 31.046 306 182 11 110 401 73 363 9.75e-35 133
MsaG025409 AT1G59580.2 31.333 300 186 10 111 399 32 322 1.06e-34 132
MsaG025409 AT1G59580.1 31.333 300 186 10 111 399 32 322 1.06e-34 132
MsaG025409 AT1G01560.2 28.808 302 184 9 114 399 43 329 3.98e-34 130
MsaG025409 AT2G46070.1 29.043 303 180 9 114 398 44 329 4.70e-34 130
MsaG025409 AT1G53050.2 30.795 302 182 12 109 397 132 419 5.33e-34 134
MsaG025409 AT1G53050.1 30.795 302 182 12 109 397 132 419 5.33e-34 134
MsaG025409 AT2G46070.3 29.043 303 180 9 114 398 78 363 6.09e-34 131
MsaG025409 AT2G18170.1 29.642 307 190 12 111 401 32 328 7.04e-34 130
MsaG025409 AT2G43790.1 29.054 296 188 9 117 401 69 353 9.31e-34 130
MsaG025409 AT1G18040.1 29.470 302 182 10 109 397 10 293 1.06e-33 130
MsaG025409 AT3G61160.5 31.142 289 174 11 111 387 102 377 1.06e-33 130
MsaG025409 AT1G74330.3 30.352 369 201 15 65 397 60 408 1.65e-33 132
MsaG025409 AT3G01085.1 31.613 310 170 12 109 397 113 401 1.67e-33 132
MsaG025409 AT3G01085.2 31.613 310 170 12 109 397 113 401 1.67e-33 132
MsaG025409 AT3G01085.3 31.613 310 170 12 109 397 113 401 2.04e-33 132
MsaG025409 AT1G74330.1 30.352 369 201 15 65 397 60 408 2.67e-33 132
MsaG025409 AT1G74330.2 30.352 369 201 15 65 397 60 408 3.23e-33 132
MsaG025409 AT3G45640.1 30.690 290 182 8 117 396 44 324 3.24e-33 128
MsaG025409 AT3G05840.2 29.870 308 189 11 110 404 72 365 4.07e-33 129
MsaG025409 AT3G05840.1 29.870 308 189 11 110 404 72 365 4.07e-33 129
MsaG025409 AT5G26751.1 30.195 308 188 11 110 404 68 361 4.23e-33 129
MsaG025409 AT4G13020.6 28.094 299 195 8 111 402 4 289 5.02e-33 128
MsaG025409 AT4G13020.4 28.094 299 195 8 111 402 4 289 5.66e-33 128
MsaG025409 AT4G13020.1 28.094 299 195 8 111 402 4 289 5.71e-33 129
MsaG025409 AT1G07880.2 29.000 300 180 10 114 396 36 319 6.49e-33 127
MsaG025409 AT4G13020.2 28.094 299 195 8 111 402 12 297 8.18e-33 128
MsaG025409 AT4G13020.3 28.094 299 195 8 111 402 12 297 8.29e-33 128
MsaG025409 AT1G09840.3 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.7 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.10 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.6 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.4 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.1 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.9 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.5 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.8 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT1G09840.2 31.475 305 174 12 117 404 89 375 9.20e-33 128
MsaG025409 AT4G13020.7 28.094 299 195 8 111 402 4 289 9.21e-33 127
MsaG025409 AT4G36450.1 29.316 307 192 11 111 405 32 325 4.93e-32 125
MsaG025409 AT1G57870.1 30.132 302 182 11 117 404 88 374 1.01e-31 125
MsaG025409 AT1G57870.4 30.132 302 182 11 117 404 88 374 1.01e-31 125
MsaG025409 AT1G57870.2 30.132 302 182 11 117 404 88 374 1.01e-31 125
MsaG025409 AT1G57870.3 30.132 302 182 11 117 404 88 374 1.34e-31 125
MsaG025409 AT1G66750.1 30.769 299 182 11 109 397 11 294 1.57e-31 123
MsaG025409 AT4G13020.5 26.623 308 197 8 111 402 4 298 1.59e-31 125
MsaG025409 AT5G50860.2 30.897 301 179 13 111 397 114 399 2.04e-31 125
MsaG025409 AT5G50860.1 30.897 301 179 13 111 397 114 399 2.21e-31 126
MsaG025409 AT4G10010.2 28.763 299 192 10 109 397 154 441 2.33e-31 126
MsaG025409 AT4G13020.8 26.623 308 197 8 111 402 4 298 2.51e-31 123
MsaG025409 AT1G18670.2 34.513 226 134 6 109 323 129 351 2.97e-31 126
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MsaG025409 AT5G63370.8 28.391 317 186 14 109 399 295 596 3.70e-26 111
MsaG025409 AT5G63370.4 28.391 317 186 14 109 399 295 596 3.70e-26 111
MsaG025409 AT5G63370.6 28.391 317 186 14 109 399 295 596 3.70e-26 111
MsaG025409 AT5G63370.1 28.391 317 186 14 109 399 295 596 3.70e-26 111
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MsaG025409 AT3G05050.1 29.915 234 133 8 109 323 136 357 4.45e-26 110
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MsaG025409 AT1G01560.4 30.415 217 138 6 114 320 43 256 1.07e-25 105
MsaG025409 AT1G01560.1 30.415 217 138 6 114 320 43 256 1.07e-25 105
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MsaG025409 AT1G71530.4 27.508 309 197 10 21 308 49 351 2.98e-25 106
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MsaG025409 AT4G19110.3 25.210 238 159 7 164 396 4 227 2.29e-23 101
MsaG025409 AT3G56760.1 25.581 301 171 11 111 396 124 386 3.63e-23 102
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MsaG025409 AT5G64960.2 31.955 266 148 13 152 396 19 272 5.43e-23 100
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MsaG025409 AT5G63370.10 30.769 234 135 10 109 323 295 520 5.81e-23 101
MsaG025409 AT3G50530.1 25.118 422 232 16 5 403 57 417 1.44e-22 100
MsaG025409 AT2G41140.1 25.000 364 209 15 50 396 69 385 1.64e-22 100
MsaG025409 AT2G46700.1 24.646 353 205 14 63 396 95 405 2.91e-22 99.4
MsaG025409 AT2G41860.1 26.623 308 171 10 111 404 54 320 8.76e-22 97.8
MsaG025409 AT2G17890.1 26.333 300 166 10 111 395 108 367 9.70e-22 97.8
MsaG025409 AT3G53570.1 26.254 339 195 14 111 400 115 447 1.20e-21 97.1
MsaG025409 AT3G53570.4 26.254 339 195 14 111 400 115 447 1.20e-21 97.1
MsaG025409 AT3G53570.2 26.254 339 195 14 111 400 115 447 1.20e-21 97.1
MsaG025409 AT4G04720.2 25.691 362 197 15 50 396 34 338 1.25e-21 97.4
MsaG025409 AT4G04720.1 25.691 362 197 15 50 396 34 338 1.25e-21 97.4
MsaG025409 AT1G49580.1 24.468 376 218 14 43 396 81 412 1.27e-21 97.4
MsaG025409 AT2G35890.2 26.974 304 171 9 111 402 132 396 1.27e-21 97.4
MsaG025409 AT2G35890.1 26.974 304 171 9 111 402 132 396 1.27e-21 97.4
MsaG025409 AT5G24430.1 25.479 365 200 16 50 396 95 405 1.31e-21 97.4
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MsaG025409 AT3G53570.5 26.254 339 195 14 111 400 101 433 1.40e-21 96.7
MsaG025409 AT5G12180.1 25.916 382 198 15 26 396 24 331 1.63e-21 97.1
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MsaG025409 AT5G66210.6 25.974 308 177 10 108 402 59 328 2.83e-21 95.5
MsaG025409 AT5G66210.4 25.974 308 177 10 108 402 59 328 2.83e-21 95.5
MsaG025409 AT5G19360.1 24.932 365 183 12 50 396 35 326 3.68e-21 95.9
MsaG025409 AT5G66210.1 26.299 308 176 10 108 402 59 328 4.34e-21 95.9
MsaG025409 AT5G66210.2 26.299 308 176 10 108 402 59 328 4.34e-21 95.9
MsaG025409 AT5G66210.5 26.299 308 176 10 108 402 59 328 5.23e-21 95.1
MsaG025409 AT3G19100.1 24.595 309 170 12 108 396 141 406 5.93e-21 95.5
MsaG025409 AT5G66210.3 26.384 307 175 10 109 402 60 328 6.59e-21 95.1
MsaG025409 AT3G57530.2 24.595 309 178 9 108 402 60 327 8.99e-21 94.0
MsaG025409 AT1G54960.1 24.665 373 205 14 57 409 27 343 1.75e-20 94.4
MsaG025409 AT1G54960.2 24.665 373 205 14 57 409 27 343 1.75e-20 94.4
MsaG025409 AT1G12580.1 28.346 254 139 11 148 396 87 302 1.77e-20 94.0
MsaG025409 AT3G57530.1 24.837 306 175 9 111 402 63 327 2.08e-20 93.6
MsaG025409 AT1G61950.1 25.249 301 175 10 108 396 95 357 4.99e-20 92.8
MsaG025409 AT4G21940.3 24.054 370 222 13 51 404 39 365 5.47e-20 92.4
MsaG025409 AT3G49370.1 26.059 307 168 12 108 396 139 404 1.01e-19 91.7
MsaG025409 AT4G21940.2 24.054 370 222 13 51 404 39 365 1.09e-19 91.7
MsaG025409 AT4G21940.1 24.054 370 222 13 51 404 39 365 1.21e-19 91.7
MsaG025409 AT1G12680.1 26.117 291 172 9 109 396 105 355 1.52e-19 90.9
MsaG025409 AT4G23650.1 25.413 303 165 11 111 396 78 336 1.64e-19 90.9
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MsaG025409 AT1G76040.2 25.413 303 173 10 111 400 112 374 2.84e-19 90.5
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MsaG025409 AT2G46700.3 25.194 258 143 10 148 396 8 224 3.05e-19 89.4
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MsaG025409 AT3G18040.2 31.004 229 141 8 183 403 14 233 6.34e-19 88.6
MsaG025409 AT5G39440.1 28.986 207 127 7 110 304 18 216 8.75e-19 88.6
MsaG025409 AT1G74740.1 24.516 310 175 11 109 402 57 323 9.13e-19 88.6
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MsaG025409 AT2G38910.1 26.159 302 168 13 108 395 131 391 1.42e-18 88.2
MsaG025409 AT2G37840.1 24.679 312 181 9 110 408 11 281 1.81e-18 88.2
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MsaG025409 AT3G63280.4 25.446 224 154 6 107 321 54 273 3.11e-13 72.0
MsaG025409 AT5G66850.1 27.536 207 130 8 115 304 350 553 3.11e-13 72.0
MsaG025409 AT2G26980.5 27.053 207 133 8 111 304 14 215 3.57e-13 71.2
MsaG025409 AT1G48260.1 29.327 208 127 9 111 304 11 212 3.69e-13 71.2
MsaG025409 AT3G20860.1 23.920 301 175 11 109 398 2 259 4.57e-13 70.9
MsaG025409 AT4G24740.3 24.390 246 146 10 111 322 98 337 5.53e-13 70.1
MsaG025409 AT5G45820.1 28.019 207 130 9 111 304 12 212 6.18e-13 70.5
MsaG025409 AT1G69220.1 27.749 191 124 7 111 292 249 434 7.85e-13 70.9
MsaG025409 AT4G30960.1 30.857 175 105 10 149 317 68 232 8.21e-13 70.1
MsaG025409 AT4G14580.1 27.184 206 135 7 111 304 21 223 1.21e-12 69.7
MsaG025409 AT5G01820.1 28.643 199 119 8 111 294 22 212 1.21e-12 69.7
MsaG025409 AT3G07980.2 24.679 312 176 14 111 408 20 286 1.81e-12 70.1
MsaG025409 AT3G07980.1 24.679 312 176 14 111 408 20 286 1.82e-12 70.1
MsaG025409 AT3G23000.1 29.327 208 127 10 111 304 25 226 2.99e-12 68.6
MsaG025409 AT5G04510.2 27.397 219 126 8 110 304 43 252 4.29e-12 67.8
MsaG025409 AT5G45810.1 28.155 206 131 9 111 304 28 228 4.89e-12 67.8
MsaG025409 AT5G04510.1 27.397 219 126 8 110 304 43 252 8.56e-12 67.0
MsaG025409 AT5G57630.3 29.524 105 73 1 200 304 18 121 1.43e-11 65.9
MsaG025409 AT3G10540.1 27.397 219 126 8 110 304 44 253 1.63e-11 66.2
MsaG025409 AT3G17510.1 27.885 208 130 9 111 304 20 221 1.95e-11 65.9
MsaG025409 AT5G04510.3 27.397 219 126 8 110 304 43 252 1.96e-11 65.1
MsaG025409 AT3G12200.1 29.204 226 139 9 109 321 17 234 2.04e-11 66.2
MsaG025409 AT2G40120.1 29.851 201 117 7 211 397 374 564 2.57e-11 65.9
MsaG025409 AT4G24740.5 24.167 240 142 10 117 322 1 234 2.60e-11 63.9
MsaG025409 AT2G34180.1 26.786 224 143 9 109 320 55 269 2.93e-11 65.5
MsaG025409 AT1G54510.4 24.775 222 154 6 109 321 2 219 4.22e-11 65.1
MsaG025409 AT1G54510.2 24.775 222 154 6 109 321 2 219 4.22e-11 65.1
MsaG025409 AT1G54510.1 24.775 222 154 6 109 321 2 219 4.22e-11 65.1
MsaG025409 AT1G54510.3 24.775 222 154 6 109 321 2 219 4.22e-11 65.1
MsaG025409 AT1G29230.1 27.536 207 133 9 111 305 74 275 4.79e-11 65.1
MsaG025409 AT3G17850.1 32.258 155 88 7 109 252 880 1028 5.02e-11 65.5
MsaG025409 AT1G48490.4 25.705 319 179 13 109 399 827 1115 5.56e-11 65.1
MsaG025409 AT1G48490.3 25.705 319 179 13 109 399 826 1114 5.81e-11 65.1
MsaG025409 AT1G48490.2 25.705 319 179 13 109 399 826 1114 5.81e-11 65.1
MsaG025409 AT1G48490.1 25.705 319 179 13 109 399 826 1114 5.81e-11 65.1
MsaG025409 AT3G04810.2 23.902 205 144 5 109 304 2 203 9.81e-11 63.9
MsaG025409 AT3G04810.1 23.902 205 144 5 109 304 2 203 9.81e-11 63.9
MsaG025409 AT3G04810.3 23.902 205 144 5 109 304 2 203 9.81e-11 63.9

Find 120 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAAGGCTATTGACTTTC+TGG 0.104558 5:-7991445 MsaT025409.1:intron
GTCAAGCAACTTTACAATAT+TGG 0.174324 5:+7996879 None:intergenic
ATGATTACTCACTAGATTTA+TGG 0.187686 5:-7993896 MsaT025409.1:CDS
CCACGTTATGCAGTGCTTAT+TGG 0.189438 5:-7991930 MsaT025409.1:CDS
CGGCGGCGGAGGAGGATATT+GGG 0.255831 5:+7998687 None:intergenic
TAAAGTTGCTTGACATTGTT+AGG 0.266930 5:-7996870 MsaT025409.1:CDS
TCAAGCAACTTTACAATATT+GGG 0.278269 5:+7996880 None:intergenic
GCGGCGGCGGAGGAGGATAT+TGG 0.281744 5:+7998686 None:intergenic
TTGTTCGACCTAAGGAATAT+TGG 0.283499 5:-7998576 MsaT025409.1:CDS
ATGGACAAAGTTCATTAATA+TGG 0.286207 5:-7991572 MsaT025409.1:CDS
CACGTTATGCAGTGCTTATT+GGG 0.289209 5:-7991929 MsaT025409.1:CDS
CCGCCCCGGCGCTTCCTCTA+AGG 0.296590 5:-7998623 MsaT025409.1:CDS
GGAAAAGGGTGGTGGAAAAT+TGG 0.325361 5:+7998753 None:intergenic
GGAGTGTCGGGCCGCGGCGG+CGG 0.325791 5:+7998673 None:intergenic
CTGCAAGTCCCCAGTCTATC+AGG 0.334754 5:+7994922 None:intergenic
CACATTCAAATACAAGGCTT+GGG 0.347064 5:+7996830 None:intergenic
TGTTCGACCTAAGGAATATT+GGG 0.354010 5:-7998575 MsaT025409.1:CDS
AGATGAATTACGTGCGTATC+AGG 0.356105 5:-7991976 MsaT025409.1:CDS
TGAACTTTGTCCATGGCTTC+CGG 0.363827 5:+7991581 None:intergenic
TTGTGTTTCTACAGATATTC+CGG 0.375130 5:-7993678 MsaT025409.1:intron
TGGAAAATTGGTGGCGGAGG+AGG 0.384127 5:+7998765 None:intergenic
CGGTTGTATGTTTGCTGGAA+TGG 0.391432 5:-7993868 MsaT025409.1:intron
GTAAGCTTTGCCTGATAGAC+TGG 0.392022 5:-7994932 MsaT025409.1:CDS
CTGCTTTCTGCATTTCTCAC+TGG 0.396739 5:+7990993 None:intergenic
TCGGGCCGCGGCGGCGGAGG+AGG 0.398665 5:+7998679 None:intergenic
GTGTCGGGCCGCGGCGGCGG+AGG 0.403561 5:+7998676 None:intergenic
GCCGCCGCGGCCCGACACTC+CGG 0.413011 5:-7998671 MsaT025409.1:CDS
TGGTGGAAAATTGGTGGCGG+AGG 0.414942 5:+7998762 None:intergenic
GAAATATAGTGAAGTGTTTG+AGG 0.418569 5:-7998395 MsaT025409.1:CDS
CATAAAAGAATGGCTCCTTC+CGG 0.429071 5:+7993659 None:intergenic
TCCCTGCTGTAACAGGTACT+TGG 0.429660 5:-7992002 MsaT025409.1:intron
TGCACCTTCTTCTTCCTGAC+AGG 0.430603 5:+7998325 None:intergenic
ACACATTCAAATACAAGGCT+TGG 0.433688 5:+7996829 None:intergenic
GGCGGCGGAGGAGGATATTG+GGG 0.437808 5:+7998688 None:intergenic
ATTCGTTGAGCCGGAGTGTC+GGG 0.443293 5:+7998661 None:intergenic
AGGAAATTGAATGATGAGTT+CGG 0.444549 5:+7998785 None:intergenic
TCGTAATCCCAATATTCCTT+AGG 0.456265 5:+7998568 None:intergenic
ACGAATCCCTCGCTGTTCAG+TGG 0.456784 5:-7998549 MsaT025409.1:CDS
GACACTCCGGCTCAACGAAT+CGG 0.465061 5:-7998658 MsaT025409.1:CDS
CTGGCCTTAGAGGAAGCGCC+GGG 0.466825 5:+7998619 None:intergenic
TCTCTCGGTTGTATGTTTGC+TGG 0.466945 5:-7993873 MsaT025409.1:CDS
ATTTCTCACTGGATTGAAGT+AGG 0.468707 5:+7991004 None:intergenic
TTTCTCACTGGATTGAAGTA+GGG 0.478958 5:+7991005 None:intergenic
TGATCGATCATAACATTATG+TGG 0.479774 5:+7994963 None:intergenic
GATATTGTGGCAGGCATGAC+CGG 0.482190 5:-7991600 MsaT025409.1:intron
CACTGGATTGAAGTAGGGGT+GGG 0.483884 5:+7991010 None:intergenic
CGAATCCCTCGCTGTTCAGT+GGG 0.484653 5:-7998548 MsaT025409.1:CDS
GAAGCGACGGAGAACGGAAA+AGG 0.484751 5:+7998738 None:intergenic
AGGATAGAGCACTTTAAAAT+CGG 0.485285 5:+7996798 None:intergenic
TCACTAGATTTATGGTCTCT+CGG 0.492697 5:-7993888 MsaT025409.1:CDS
TTATATCTATGAACTTCTAA+AGG 0.497483 5:-7996749 MsaT025409.1:intron
ATTGACATCAGCGTAAATTC+TGG 0.497604 5:+7998600 None:intergenic
TCAAGATACTCAAACCTGTC+AGG 0.500233 5:-7998339 MsaT025409.1:CDS
AGCGTAAATTCTGGCCTTAG+AGG 0.503820 5:+7998609 None:intergenic
TGAGCCGGAGTGTCGGGCCG+CGG 0.503928 5:+7998667 None:intergenic
TATTAACACATTCAAATACA+AGG 0.504722 5:+7996824 None:intergenic
TGAAGATCAATAAGTAGCTC+AGG 0.505162 5:+7993924 None:intergenic
GCGGACATTATACTCTTGCC+CGG 0.506358 5:+7994887 None:intergenic
GCCGGAGTGTCGGGCCGCGG+CGG 0.509020 5:+7998670 None:intergenic
GGAAGCGCCGGGGCGGCGAA+TGG 0.515785 5:+7998630 None:intergenic
GATTCGTTGAGCCGGAGTGT+CGG 0.518627 5:+7998660 None:intergenic
TCACTGGATTGAAGTAGGGG+TGG 0.519460 5:+7991009 None:intergenic
TCTGGCCTTAGAGGAAGCGC+CGG 0.519768 5:+7998618 None:intergenic
TGTCAATGTTGTTCGACCTA+AGG 0.520891 5:-7998584 MsaT025409.1:CDS
GATTCTAAATGCAGATAAAG+AGG 0.521107 5:-7996936 MsaT025409.1:intron
TGTGGATTGGAATGGCCTAA+TGG 0.525920 5:+7998837 None:intergenic
AAATATAGTGAAGTGTTTGA+GGG 0.525926 5:-7998394 MsaT025409.1:CDS
GGAAAATCCATTCGCCGCCC+CGG 0.527555 5:-7998637 MsaT025409.1:CDS
CTCACAAGGAATCATGCATC+GGG 0.529525 5:-7994994 MsaT025409.1:CDS
ATATTAATGAACTTTGTCCA+TGG 0.532264 5:+7991574 None:intergenic
GCAGGCATGACCGGAAGCCA+TGG 0.539618 5:-7991591 MsaT025409.1:intron
TTCTCACTGGATTGAAGTAG+GGG 0.541816 5:+7991006 None:intergenic
TTATCTTGTCCATAAAAGAA+TGG 0.544738 5:+7993649 None:intergenic
AAAGTTGCTTGACATTGTTA+GGG 0.545644 5:-7996869 MsaT025409.1:CDS
TTCCAACCTTCTTCAAAACC+TGG 0.546000 5:+7998422 None:intergenic
GCGGCGGAGGAGGATATTGG+GGG 0.547693 5:+7998689 None:intergenic
AAGCGACGGAGAACGGAAAA+GGG 0.556827 5:+7998739 None:intergenic
ATAATGTCCGCGTTGCCTCA+AGG 0.558306 5:-7994875 MsaT025409.1:intron
GCTCACTGCAAAAGAAGCTA+TGG 0.559102 5:-7991391 MsaT025409.1:intron
AGTTGCGAAGCGACGGAGAA+CGG 0.562749 5:+7998732 None:intergenic
TAGGGAACAAGATGATTACC+AGG 0.564026 5:-7998440 MsaT025409.1:CDS
ATTGTTTGTAGATATTTCAA+AGG 0.566363 5:-7993948 MsaT025409.1:intron
TAAGCTTTGCCTGATAGACT+GGG 0.568238 5:-7994931 MsaT025409.1:CDS
GGAAAAGAGAGAAGAATCGT+TGG 0.568272 5:+7998806 None:intergenic
ATTCTAAATGCAGATAAAGA+GGG 0.570668 5:-7996935 MsaT025409.1:intron
AAAGGGTGGTGGAAAATTGG+TGG 0.572817 5:+7998756 None:intergenic
CCAATAAGCACTGCATAACG+TGG 0.573282 5:+7991930 None:intergenic
CGGAGAACGGAAAAGGGTGG+TGG 0.573335 5:+7998745 None:intergenic
GTTGGAGCGATAGTGTGGAT+TGG 0.576502 5:+7998824 None:intergenic
TAATATGGATAACCGACACT+TGG 0.582163 5:-7991557 MsaT025409.1:CDS
GGACAAGTATCACATAGAGT+TGG 0.583275 5:-7991955 MsaT025409.1:CDS
CCGACACTTGGTTGTTCCTG+AGG 0.583880 5:-7991545 MsaT025409.1:intron
ACTCACAAGGAATCATGCAT+CGG 0.585420 5:-7994995 MsaT025409.1:CDS
ATATCATAGTCAGACAATGT+AGG 0.588849 5:+7996778 None:intergenic
AGAACGAAGTTGCGAAGCGA+CGG 0.590316 5:+7998725 None:intergenic
TACAGTATGATCACCAAGAA+CGG 0.590613 5:-7991413 MsaT025409.1:CDS
CAAACCTGTCAGGAAGAAGA+AGG 0.595910 5:-7998329 MsaT025409.1:intron
ACATTCAAATACAAGGCTTG+GGG 0.597113 5:+7996831 None:intergenic
TTGGATTATTGCCACTCACA+AGG 0.598187 5:-7995008 MsaT025409.1:CDS
GAATCGTTGGAGCGATAGTG+TGG 0.599106 5:+7998819 None:intergenic
TGTTTGAGGGTGTTCACTGT+GGG 0.606862 5:-7998381 MsaT025409.1:CDS
CGGACATTATACTCTTGCCC+GGG 0.611735 5:+7994888 None:intergenic
AATATCCTCCTCCGCCGCCG+CGG 0.612281 5:-7998684 MsaT025409.1:CDS
GGGTGGTGGAAAATTGGTGG+CGG 0.617056 5:+7998759 None:intergenic
GTTTCTACAGATATTCCGGA+AGG 0.620209 5:-7993674 MsaT025409.1:intron
CCTTAGAGGAAGCGCCGGGG+CGG 0.622182 5:+7998623 None:intergenic
GTTATGCAGTGCTTATTGGG+AGG 0.642017 5:-7991926 MsaT025409.1:intron
ATATTGCAAAATCTCTGTGG+AGG 0.648754 5:-7996904 MsaT025409.1:CDS
AATCCCTCGCTGTTCAGTGG+GGG 0.654700 5:-7998546 MsaT025409.1:intron
AAGATATTGCAAAATCTCTG+TGG 0.659624 5:-7996907 MsaT025409.1:CDS
GAATCCCTCGCTGTTCAGTG+GGG 0.664197 5:-7998547 MsaT025409.1:CDS
GATGCATGATTCCTTGTGAG+TGG 0.682314 5:+7994997 None:intergenic
GTGTTTGAGGGTGTTCACTG+TGG 0.685566 5:-7998382 MsaT025409.1:CDS
AGCGATAGTGTGGATTGGAA+TGG 0.687220 5:+7998829 None:intergenic
CCTCAGGAACAACCAAGTGT+CGG 0.690799 5:+7991545 None:intergenic
CAATAAGCACTGCATAACGT+GGG 0.701539 5:+7991931 None:intergenic
CGACGGAGAACGGAAAAGGG+TGG 0.707641 5:+7998742 None:intergenic
TGGCCTTAGAGGAAGCGCCG+GGG 0.717994 5:+7998620 None:intergenic
AAGCTTTGCCTGATAGACTG+GGG 0.722764 5:-7994930 MsaT025409.1:CDS
TAACAAACCTTGAGGCAACG+CGG 0.724016 5:+7994868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 7990974 7998863 7990974 ID=MsaG025409
Chr5 mRNA 7990974 7998863 7990974 ID=MsaT025409.1;Parent=MsaG025409
Chr5 exon 7990974 7991033 7990974 ID=MsaT025409.1.exon10;Parent=MsaT025409.1
Chr5 CDS 7990974 7991033 7990974 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7991392 7991460 7991392 ID=MsaT025409.1.exon9;Parent=MsaT025409.1
Chr5 CDS 7991392 7991460 7991392 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7991546 7991609 7991546 ID=MsaT025409.1.exon8;Parent=MsaT025409.1
Chr5 CDS 7991546 7991609 7991546 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7991927 7992009 7991927 ID=MsaT025409.1.exon7;Parent=MsaT025409.1
Chr5 CDS 7991927 7992009 7991927 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7993621 7993686 7993621 ID=MsaT025409.1.exon6;Parent=MsaT025409.1
Chr5 CDS 7993621 7993686 7993621 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7993869 7993959 7993869 ID=MsaT025409.1.exon5;Parent=MsaT025409.1
Chr5 CDS 7993869 7993959 7993869 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7994876 7995033 7994876 ID=MsaT025409.1.exon4;Parent=MsaT025409.1
Chr5 CDS 7994876 7995033 7994876 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7996750 7996944 7996750 ID=MsaT025409.1.exon3;Parent=MsaT025409.1
Chr5 CDS 7996750 7996944 7996750 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7998330 7998459 7998330 ID=MsaT025409.1.exon2;Parent=MsaT025409.1
Chr5 CDS 7998330 7998459 7998330 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Chr5 exon 7998547 7998863 7998547 ID=MsaT025409.1.exon1;Parent=MsaT025409.1
Chr5 CDS 7998547 7998863 7998547 ID=cds.MsaT025409.1;Parent=MsaT025409.1
Gene Sequence

>MsaT025409.1

ATGGCCATTAGGCCATTCCAATCCACACTATCGCTCCAACGATTCTTCTCTCTTTTCCGAACTCATCATTCAATTTCCTCCTCCGCCACCAATTTTCCACCACCCTTTTCCGTTCTCCGTCGCTTCGCAACTTCGTTCTCACAACCTCGCCGCCCCCAATATCCTCCTCCGCCGCCGCGGCCCGACACTCCGGCTCAACGAATCGGAAAATCCATTCGCCGCCCCGGCGCTTCCTCTAAGGCCAGAATTTACGCTGATGTCAATGTTGTTCGACCTAAGGAATATTGGGATTACGAATCCCTCGCTGTTCAGTGGGGGGAACAAGATGATTACCAGGTTTTGAAGAAGGTTGGAAGAGGGAAATATAGTGAAGTGTTTGAGGGTGTTCACTGTGGGAATGATGAAAAATGTATCATCAAGATACTCAAACCTGTCAGGAAGAAGAAGATAAAGAGGGAGATCAAGATATTGCAAAATCTCTGTGGAGGACCCAATATTGTAAAGTTGCTTGACATTGTTAGGGACCAGCAATCAAAAACCCCAAGCCTTGTATTTGAATGTGTTAATAACACCGATTTTAAAGTGCTCTATCCTACATTGTCTGACTATGATATACGATATTATATCTATGAACTTCTAAAGGCATTGGATTATTGCCACTCACAAGGAATCATGCATCGGGATGTAAAACCACATAATGTTATGATCGATCATGCGCAGCGTAAGCTTTGCCTGATAGACTGGGGACTTGCAGAGTTTTATCATCCCGGGCAAGAGTATAATGTCCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTACTTATTGATCTTCAAGACTATGATTACTCACTAGATTTATGGTCTCTCGGTTGTATGTTTGCTGGAATGATATTCCGGAAGGAGCCATTCTTTTATGGACAAGATAACTATGATCAACTAGTAAAAATAGCCAAGGTACTTGGAACAGATGAATTACGTGCGTATCAGGACAAGTATCACATAGAGTTGGACCCACGTTATGCAGTGCTTATTGGGAGGCATGACCGGAAGCCATGGACAAAGTTCATTAATATGGATAACCGACACTTGGTTGTTCCTGAGGCTATTGACTTTCTGGACAAGTTACTACAGTATGATCACCAAGAACGGCTCACTGCAAAAGAAGCTATGGCCCACCCCTACTTCAATCCAGTGAGAAATGCAGAAAGCAGTAAAACTCGCACACATTGA
Protein sequence

>MsaT025409.1

MAIRPFQSTLSLQRFFSLFRTHHSISSSATNFPPPFSVLRRFATSFSQPRRPQYPPPPPRPDTPAQRIGKSIRRPGASSKARIYADVNVVRPKEYWDYESLAVQWGEQDDYQVLKKVGRGKYSEVFEGVHCGNDEKCIIKILKPVRKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLVFECVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHAQRKLCLIDWGLAEFYHPGQEYNVRVASRYFKGPELLIDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGQDNYDQLVKIAKVLGTDELRAYQDKYHIELDPRYAVLIGRHDRKPWTKFINMDNRHLVVPEAIDFLDKLLQYDHQERLTAKEAMAHPYFNPVRNAESSKTRTH*