AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025451

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025451 MtrunA17_Chr5g0401731 97.492 319 5 1 1 319 11 326 0.0 627
MsaG025451 MtrunA17_Chr4g0053431 53.963 328 83 10 1 318 1 270 1.21e-104 307
MsaG025451 MtrunA17_Chr6g0454921 86.726 113 15 0 1 113 11 123 1.02e-69 216
MsaG025451 MtrunA17_Chr3g0133601 74.766 107 27 0 1 107 33 139 1.03e-56 183
MsaG025451 MtrunA17_Chr5g0437321 39.404 302 140 8 2 296 16 281 1.40e-54 179
MsaG025451 MtrunA17_Chr4g0008551 68.932 103 32 0 3 105 36 138 2.01e-47 162
MsaG025451 MtrunA17_Chr5g0417621 56.436 101 44 0 5 105 134 234 3.01e-38 140
MsaG025451 MtrunA17_Chr4g0042501 55.446 101 45 0 5 105 105 205 6.16e-38 139
MsaG025451 MtrunA17_Chr3g0139671 42.424 165 82 3 4 159 84 244 8.96e-37 140
MsaG025451 MtrunA17_Chr1g0157731 54.206 107 49 0 4 110 90 196 9.86e-37 140
MsaG025451 MtrunA17_Chr6g0460671 39.752 161 90 2 4 161 98 254 1.97e-36 134
MsaG025451 MtrunA17_Chr7g0238631 57.843 102 43 0 4 105 112 213 2.78e-36 137
MsaG025451 MtrunA17_Chr7g0254261 46.617 133 62 2 5 128 89 221 3.01e-35 130
MsaG025451 MtrunA17_Chr6g0480581 54.000 100 46 0 5 104 4 103 3.91e-35 127
MsaG025451 MtrunA17_Chr3g0125801 56.436 101 44 0 5 105 16 116 8.15e-35 128
MsaG025451 MtrunA17_Chr3g0117511 51.402 107 52 0 1 107 179 285 1.51e-33 128
MsaG025451 MtrunA17_Chr4g0058991 52.885 104 49 0 4 107 208 311 2.03e-33 127
MsaG025451 MtrunA17_Chr3g0103281 50.459 109 53 1 5 112 14 122 3.40e-33 124
MsaG025451 MtrunA17_Chr5g0417821 50.435 115 56 1 5 118 9 123 5.90e-33 123
MsaG025451 MtrunA17_Chr5g0429661 48.077 104 54 0 4 107 121 224 1.99e-31 120
MsaG025451 MtrunA17_Chr4g0013361 49.606 127 60 3 5 129 12 136 3.46e-31 119
MsaG025451 MtrunA17_Chr5g0410961 50.459 109 53 1 5 112 14 122 3.92e-31 119
MsaG025451 MtrunA17_Chr3g0099131 52.941 102 47 1 5 105 43 144 1.09e-30 121
MsaG025451 MtrunA17_Chr8g0385321 50.427 117 57 1 5 120 14 130 1.68e-30 117
MsaG025451 MtrunA17_Chr4g0039971 51.818 110 50 2 5 112 15 123 3.19e-30 117
MsaG025451 MtrunA17_Chr5g0397841 53.061 98 46 0 2 99 107 204 3.89e-30 119
MsaG025451 MtrunA17_Chr1g0203411 52.941 102 47 1 5 105 14 115 4.96e-30 115
MsaG025451 MtrunA17_Chr6g0453471 46.789 109 57 1 5 112 14 122 6.63e-30 116
MsaG025451 MtrunA17_Chr4g0048511 46.789 109 57 1 5 112 15 123 7.70e-30 116
MsaG025451 MtrunA17_Chr5g0395281 50.909 110 51 2 5 112 14 122 1.01e-29 115
MsaG025451 MtrunA17_Chr8g0334881 54.902 102 44 2 5 104 12 113 1.07e-29 115
MsaG025451 MtrunA17_Chr7g0228531 51.961 102 48 1 4 105 219 319 1.38e-29 117
MsaG025451 MtrunA17_Chr1g0193371 50.427 117 55 2 5 119 14 129 1.51e-29 115
MsaG025451 MtrunA17_Chr2g0281071 47.706 109 56 1 5 112 15 123 1.51e-29 115
MsaG025451 MtrunA17_Chr7g0264641 49.533 107 52 2 5 109 14 120 2.63e-29 113
MsaG025451 MtrunA17_Chr1g0187761 45.255 137 62 4 5 132 14 146 3.51e-29 112
MsaG025451 MtrunA17_Chr3g0131121 41.026 156 77 2 5 159 14 155 3.72e-29 113
MsaG025451 MtrunA17_Chr7g0228481 50.000 106 50 2 1 106 216 318 4.04e-29 115
MsaG025451 MtrunA17_Chr3g0115821 48.182 110 54 2 5 112 14 122 4.14e-29 114
MsaG025451 MtrunA17_Chr6g0452271 42.975 121 68 1 5 124 14 134 5.54e-29 113
MsaG025451 MtrunA17_Chr4g0022911 38.312 154 90 2 5 157 15 164 6.66e-29 112
MsaG025451 MtrunA17_Chr7g0217741 47.706 109 56 1 5 112 14 122 7.21e-29 112
MsaG025451 MtrunA17_Chr3g0135311 50.485 103 49 2 5 105 14 116 9.52e-29 113
MsaG025451 MtrunA17_Chr1g0203441 48.598 107 54 1 5 110 15 121 1.26e-28 111
MsaG025451 MtrunA17_Chr1g0167691 50.980 102 49 1 5 105 14 115 1.27e-28 110
MsaG025451 MtrunA17_Chr4g0022901 36.364 154 84 2 5 157 15 155 1.27e-28 111
MsaG025451 MtrunA17_Chr4g0022891 44.275 131 62 4 5 133 14 135 1.59e-28 110
MsaG025451 MtrunA17_Chr5g0400821 50.485 103 49 2 5 105 14 116 2.21e-28 111
MsaG025451 MtrunA17_Chr1g0168661 48.113 106 52 2 5 108 23 127 2.22e-28 110
MsaG025451 MtrunA17_Chr4g0028311 48.624 109 54 2 5 111 14 122 2.46e-28 111
MsaG025451 MtrunA17_Chr2g0328771 41.791 134 77 1 5 137 22 155 2.57e-28 111
MsaG025451 MtrunA17_Chr4g0055981 47.170 106 55 1 5 109 57 162 2.59e-28 109
MsaG025451 MtrunA17_Chr8g0349261 36.757 185 89 4 5 162 15 198 2.80e-28 110
MsaG025451 MtrunA17_Chr1g0211161 48.718 117 57 2 5 119 15 130 2.98e-28 109
MsaG025451 MtrunA17_Chr7g0275911 49.057 106 45 2 5 105 14 115 3.09e-28 110
MsaG025451 MtrunA17_Chr5g0435101 47.706 109 56 1 5 112 13 121 3.17e-28 108
MsaG025451 MtrunA17_Chr4g0032401 46.847 111 58 1 5 114 19 129 3.91e-28 111
MsaG025451 MtrunA17_Chr1g0186061 49.515 103 49 2 5 105 22 123 4.49e-28 109
MsaG025451 MtrunA17_Chr6g0460661 36.800 125 79 0 5 129 16 140 4.96e-28 106
MsaG025451 MtrunA17_Chr3g0117091 46.341 123 63 2 5 125 14 135 4.96e-28 111
MsaG025451 MtrunA17_Chr5g0441131 48.182 110 53 3 1 106 7 116 5.72e-28 107
MsaG025451 MtrunA17_Chr7g0228891 43.697 119 64 2 5 121 14 131 7.75e-28 109
MsaG025451 MtrunA17_Chr7g0254411 49.057 106 53 1 5 109 14 119 7.89e-28 110
MsaG025451 MtrunA17_Chr2g0323411 36.538 156 98 1 5 159 14 169 8.77e-28 110
MsaG025451 MtrunA17_Chr8g0346561 51.961 102 48 1 5 105 14 115 9.09e-28 109
MsaG025451 MtrunA17_Chr2g0309911 49.091 110 53 2 5 112 13 121 1.03e-27 109
MsaG025451 MtrunA17_Chr1g0152011 50.485 103 49 2 5 105 14 116 1.05e-27 110
MsaG025451 MtrunA17_Chr8g0354661 50.000 102 50 1 5 105 39 140 1.09e-27 112
MsaG025451 MtrunA17_Chr3g0088461 51.961 102 48 1 5 105 24 125 1.51e-27 110
MsaG025451 MtrunA17_Chr4g0037141 46.552 116 61 1 5 119 14 129 1.62e-27 108
MsaG025451 MtrunA17_Chr7g0274581 47.170 106 55 1 1 105 10 115 1.90e-27 106
MsaG025451 MtrunA17_Chr4g0058631 47.500 120 62 1 5 123 14 133 2.01e-27 110
MsaG025451 MtrunA17_Chr7g0270891 49.138 116 58 1 5 119 14 129 2.11e-27 110
MsaG025451 MtrunA17_Chr1g0151941 47.573 103 52 2 5 105 14 116 2.30e-27 107
MsaG025451 MtrunA17_Chr2g0327351 53.061 98 44 2 5 100 14 111 2.38e-27 108
MsaG025451 MtrunA17_Chr6g0470971 50.000 102 50 1 5 105 16 117 2.60e-27 108
MsaG025451 MtrunA17_Chr1g0193801 46.341 123 65 1 5 126 14 136 2.95e-27 110
MsaG025451 MtrunA17_Chr1g0154031 50.980 102 49 1 5 105 78 179 3.18e-27 110
MsaG025451 MtrunA17_Chr4g0022931 44.444 117 64 1 5 120 15 131 3.68e-27 107
MsaG025451 MtrunA17_Chr2g0323351 48.039 102 50 2 5 104 14 114 4.01e-27 106
MsaG025451 MtrunA17_Chr8g0387421 51.961 102 48 1 5 105 14 115 4.53e-27 108
MsaG025451 MtrunA17_Chr4g0042671 42.308 130 73 2 5 133 14 142 6.24e-27 109
MsaG025451 MtrunA17_Chr4g0068061 44.094 127 68 2 5 128 14 140 6.71e-27 108
MsaG025451 MtrunA17_Chr5g0440781 48.182 110 54 3 2 109 11 119 7.24e-27 104
MsaG025451 MtrunA17_Chr8g0342541 36.000 200 100 8 5 178 14 211 7.48e-27 108
MsaG025451 MtrunA17_Chr7g0217221 49.020 102 51 1 5 105 14 115 7.64e-27 106
MsaG025451 MtrunA17_Chr4g0060721 49.057 106 45 2 5 105 15 116 8.32e-27 107
MsaG025451 MtrunA17_Chr2g0330041 33.168 202 97 6 5 194 14 189 1.03e-26 108
MsaG025451 MtrunA17_Chr1g0167661 32.663 199 129 3 5 202 14 208 1.11e-26 105
MsaG025451 MtrunA17_Chr2g0322521 52.941 102 47 1 5 105 31 132 1.15e-26 108
MsaG025451 MtrunA17_Chr1g0209661 41.284 109 63 1 5 112 29 137 1.40e-26 106
MsaG025451 MtrunA17_Chr5g0440761 48.182 110 54 3 2 109 11 119 1.54e-26 105
MsaG025451 MtrunA17_Chr3g0080861 49.020 102 51 1 5 105 39 140 1.65e-26 109
MsaG025451 MtrunA17_Chr4g0044421 43.363 113 63 1 1 112 10 122 1.68e-26 103
MsaG025451 MtrunA17_Chr4g0030881 44.037 109 53 2 5 105 9 117 1.89e-26 105
MsaG025451 MtrunA17_Chr5g0441141 48.182 110 54 3 2 109 11 119 2.09e-26 105
MsaG025451 MtrunA17_Chr5g0397231 53.608 97 44 1 5 100 14 110 2.18e-26 106
MsaG025451 MtrunA17_Chr3g0121241 44.828 116 63 1 5 119 44 159 2.24e-26 105
MsaG025451 MtrunA17_Chr1g0180391 48.544 103 50 2 5 105 21 122 2.76e-26 103
MsaG025451 MtrunA17_Chr7g0271241 50.427 117 55 2 5 119 14 129 2.99e-26 107
MsaG025451 MtrunA17_Chr7g0228231 48.077 104 53 1 2 104 13 116 3.24e-26 103
MsaG025451 MtrunA17_Chr8g0342521 36.735 196 100 6 5 178 14 207 6.12e-26 105
MsaG025451 MtrunA17_Chr3g0092401 46.364 110 50 2 5 109 15 120 7.23e-26 104
MsaG025451 MtrunA17_Chr7g0261281 49.020 102 51 1 5 105 14 115 8.57e-26 103
MsaG025451 MtrunA17_Chr4g0057031 43.802 121 65 2 5 123 14 133 1.44e-25 103
MsaG025451 MtrunA17_Chr2g0311221 51.546 97 46 1 5 100 16 112 1.69e-25 103
MsaG025451 MtrunA17_Chr4g0054391 49.485 97 47 2 5 99 14 110 1.72e-25 103
MsaG025451 MtrunA17_Chr4g0022881 45.763 118 58 4 5 117 14 130 1.92e-25 101
MsaG025451 MtrunA17_Chr8g0343831 47.059 102 53 1 5 105 10 111 2.19e-25 102
MsaG025451 MtrunA17_Chr6g0453211 48.515 101 43 2 5 100 14 110 2.89e-25 103
MsaG025451 MtrunA17_Chr2g0327821 44.660 103 56 1 5 106 8 110 2.93e-25 101
MsaG025451 MtrunA17_Chr1g0194951 45.455 110 51 2 5 109 14 119 3.59e-25 103
MsaG025451 MtrunA17_Chr7g0220341 41.379 116 65 1 5 117 27 142 5.65e-25 101
MsaG025451 MtrunA17_Chr4g0072751 50.000 98 47 2 5 100 14 111 6.57e-25 102
MsaG025451 MtrunA17_Chr6g0450101 44.340 106 58 1 5 109 16 121 1.00e-24 99.4
MsaG025451 MtrunA17_Chr5g0434571 43.333 120 65 2 5 122 50 168 1.37e-24 102
MsaG025451 MtrunA17_Chr3g0110351 44.545 110 58 2 5 112 14 122 1.50e-24 101
MsaG025451 MtrunA17_Chr7g0228401 54.651 86 39 0 16 101 290 375 4.38e-24 102
MsaG025451 MtrunA17_Chr1g0194301 43.119 109 61 1 5 112 35 143 8.11e-24 98.6
MsaG025451 MtrunA17_Chr5g0434831 42.157 102 58 1 5 105 9 110 8.95e-24 96.3
MsaG025451 MtrunA17_Chr4g0070641 39.823 113 67 1 5 116 14 126 1.10e-23 95.5
MsaG025451 MtrunA17_Chr5g0434931 40.000 105 62 1 5 108 37 141 1.21e-23 98.2
MsaG025451 MtrunA17_Chr8g0342481 48.077 104 50 3 5 105 14 116 1.26e-23 100
MsaG025451 MtrunA17_Chr5g0434911 41.176 102 59 1 5 105 23 124 1.29e-23 97.8
MsaG025451 MtrunA17_Chr7g0228991 41.905 105 60 1 5 108 31 135 1.53e-23 97.8
MsaG025451 MtrunA17_Chr4g0070611 42.453 106 60 1 5 109 14 119 1.79e-23 98.2
MsaG025451 MtrunA17_Chr5g0434841 43.137 102 57 1 5 105 22 123 2.86e-23 97.8
MsaG025451 MtrunA17_Chr1g0194291 42.202 109 62 1 5 112 23 131 5.14e-23 95.9
MsaG025451 MtrunA17_Chr6g0487491 44.144 111 52 3 5 105 14 124 5.60e-23 95.9
MsaG025451 MtrunA17_Chr3g0099141 50.000 84 41 1 5 87 42 125 7.11e-23 92.4
MsaG025451 MtrunA17_Chr7g0233061 44.762 105 53 2 4 105 179 281 7.17e-23 97.4
MsaG025451 MtrunA17_Chr2g0293911 41.593 113 65 1 1 112 22 134 7.80e-23 96.7
MsaG025451 MtrunA17_Chr4g0068921 41.593 113 65 1 1 112 22 134 1.13e-22 93.6
MsaG025451 MtrunA17_Chr7g0247131 53.571 84 37 1 31 112 5 88 1.57e-22 94.7
MsaG025451 MtrunA17_Chr1g0192411 44.118 102 56 1 5 105 14 115 2.29e-22 96.7
MsaG025451 MtrunA17_Chr8g0360111 42.424 99 56 1 5 102 27 125 3.31e-22 94.0
MsaG025451 MtrunA17_Chr1g0177901 49.412 85 43 0 16 100 5 89 1.50e-21 90.9
MsaG025451 MtrunA17_Chr7g0240821 37.391 115 71 1 7 120 5 119 4.82e-21 89.7
MsaG025451 MtrunA17_Chr7g0269831 35.519 183 108 4 5 183 14 190 6.73e-21 91.7
MsaG025451 MtrunA17_Chr8g0362231 39.048 105 63 1 8 112 25 128 1.99e-20 91.3
MsaG025451 MtrunA17_Chr5g0416341 37.755 98 61 0 8 105 29 126 2.44e-20 91.3
MsaG025451 MtrunA17_Chr3g0093811 45.349 86 47 0 38 123 18 103 7.20e-20 87.4
MsaG025451 MtrunA17_Chr5g0425591 45.882 85 44 2 1 83 7 91 1.46e-18 79.3
MsaG025451 MtrunA17_Chr5g0395221 48.000 75 38 1 5 78 14 88 1.81e-17 76.3
MsaG025451 MtrunA17_Chr7g0229131 45.588 68 37 0 37 104 7 74 2.15e-16 75.9
MsaG025451 MtrunA17_Chr5g0434901 44.737 76 39 1 28 103 2 74 4.75e-16 73.2
MsaG025451 MtrunA17_Chr6g0453751 43.820 89 40 3 5 83 22 110 7.83e-16 73.2
MsaG025451 MtrunA17_Chr7g0229101 47.761 67 35 0 37 103 7 73 8.35e-16 75.1
MsaG025451 MtrunA17_Chr4g0042611 44.000 75 41 1 5 78 14 88 1.06e-15 71.2
MsaG025451 MtrunA17_Chr2g0323321 37.634 93 55 2 5 95 13 104 5.77e-15 70.1
MsaG025451 MtrunA17_Chr7g0238651 37.234 94 56 1 8 98 10 103 7.30e-14 71.6
MsaG025451 MtrunA17_Chr8g0342511 44.000 75 39 2 5 77 14 87 1.39e-13 65.9
MsaG025451 MtrunA17_Chr2g0294811 36.905 84 52 1 5 87 14 97 2.69e-13 65.9
MsaG025451 MtrunA17_Chr8g0342461 44.872 78 39 3 5 79 14 90 3.66e-13 65.9
MsaG025451 MtrunA17_Chr8g0342531 42.857 77 41 2 5 79 14 89 5.46e-13 66.2
MsaG025451 MtrunA17_Chr8g0342471 44.872 78 39 3 5 79 14 90 1.26e-12 64.3
MsaG025451 MtrunA17_Chr3g0104501 50.943 53 26 0 4 56 132 184 1.50e-12 65.5
MsaG025451 MtrunA17_Chr7g0233161 47.458 59 31 0 2 60 296 354 8.75e-12 65.1
MsaG025451 MtrunA17_Chr7g0233151 55.319 47 21 0 59 105 5 51 1.16e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025451 AT4G37260.1 49.855 345 113 10 1 318 9 320 9.71e-98 291
MsaG025451 AT5G67300.1 53.191 329 116 14 2 318 3 305 3.94e-90 271
MsaG025451 AT3G50060.1 50.980 306 103 8 2 294 3 274 2.17e-84 256
MsaG025451 AT2G23290.1 44.957 347 116 7 1 318 9 309 1.31e-81 250
MsaG025451 AT3G55730.1 68.224 107 34 0 3 109 54 160 3.63e-48 166
MsaG025451 AT3G09230.1 60.484 124 38 1 2 114 52 175 6.85e-47 163
MsaG025451 AT2G39880.1 65.049 103 36 0 3 105 48 150 3.58e-44 155
MsaG025451 AT3G09370.1 55.556 117 52 0 2 118 127 243 5.01e-39 144
MsaG025451 AT3G09370.2 55.556 117 52 0 2 118 132 248 5.24e-39 144
MsaG025451 AT3G09370.3 55.556 117 52 0 2 118 140 256 5.68e-39 144
MsaG025451 AT1G69560.1 55.446 101 45 0 5 105 107 207 2.09e-38 139
MsaG025451 AT1G69560.2 55.446 101 45 0 5 105 123 223 2.41e-38 139
MsaG025451 AT4G32730.1 44.099 161 85 2 4 160 86 245 3.42e-38 144
MsaG025451 AT4G32730.5 44.099 161 85 2 4 160 86 245 3.98e-38 144
MsaG025451 AT4G32730.4 44.099 161 85 2 4 160 86 245 3.98e-38 144
MsaG025451 AT4G32730.3 44.099 161 85 2 4 160 86 245 3.98e-38 144
MsaG025451 AT4G32730.2 44.099 161 85 2 4 160 86 245 3.98e-38 144
MsaG025451 AT1G26780.1 55.446 101 45 0 5 105 98 198 6.83e-38 136
MsaG025451 AT5G17800.1 47.015 134 68 1 5 138 93 223 8.82e-38 137
MsaG025451 AT1G26780.2 55.446 101 45 0 5 105 98 198 2.28e-37 137
MsaG025451 AT5G02320.3 50.000 120 60 0 4 123 66 185 2.66e-37 139
MsaG025451 AT3G29020.1 54.455 101 46 0 5 105 65 165 3.09e-37 133
MsaG025451 AT5G02320.1 50.000 120 60 0 4 123 126 245 3.77e-37 139
MsaG025451 AT5G02320.2 50.000 120 60 0 4 123 126 245 3.77e-37 139
MsaG025451 AT3G29020.2 54.455 101 46 0 5 105 67 167 1.58e-36 133
MsaG025451 AT5G11510.3 48.333 120 58 1 4 119 80 199 4.14e-36 138
MsaG025451 AT5G11510.1 48.333 120 58 1 4 119 80 199 4.14e-36 138
MsaG025451 AT5G11510.4 48.333 120 58 1 4 119 80 199 4.14e-36 138
MsaG025451 AT5G11510.2 48.333 120 58 1 4 119 80 199 5.08e-36 138
MsaG025451 AT5G11510.5 48.333 120 58 1 4 119 80 199 5.11e-36 138
MsaG025451 AT4G33450.1 52.475 101 48 0 5 105 19 119 1.85e-35 129
MsaG025451 AT1G17950.1 51.485 101 49 0 5 105 5 105 7.81e-35 127
MsaG025451 AT5G11050.1 50.962 104 51 0 4 107 104 207 1.32e-34 130
MsaG025451 AT1G73410.2 54.455 101 46 0 5 105 6 106 2.45e-34 124
MsaG025451 AT1G73410.1 54.455 101 46 0 5 105 6 106 2.76e-34 125
MsaG025451 AT5G60890.1 47.967 123 63 1 5 126 14 136 1.36e-33 125
MsaG025451 AT5G58850.1 38.509 161 95 2 4 160 104 264 1.62e-33 128
MsaG025451 AT3G27785.1 53.846 104 48 0 4 107 188 291 1.68e-33 128
MsaG025451 AT4G18770.1 51.818 110 48 1 4 108 216 325 1.90e-32 125
MsaG025451 AT5G10280.1 50.909 110 51 2 5 112 14 122 1.00e-31 121
MsaG025451 AT5G54230.1 49.541 109 54 1 5 112 14 122 9.58e-31 118
MsaG025451 AT5G16770.4 45.669 127 68 1 5 130 14 140 1.27e-30 118
MsaG025451 AT5G16770.3 45.669 127 68 1 5 130 14 140 1.27e-30 118
MsaG025451 AT5G65230.1 50.909 110 51 2 5 112 14 122 1.61e-30 117
MsaG025451 AT5G16770.1 45.669 127 68 1 5 130 14 140 2.05e-30 117
MsaG025451 AT5G16770.2 45.669 127 68 1 5 130 14 140 2.05e-30 117
MsaG025451 AT4G26930.1 53.465 101 46 1 5 104 21 121 3.07e-30 118
MsaG025451 AT4G28110.1 48.624 109 55 1 5 112 14 122 3.15e-30 116
MsaG025451 AT5G56110.1 47.706 109 56 1 5 112 14 122 3.93e-30 117
MsaG025451 AT2G32460.2 52.941 102 47 1 5 105 8 109 4.81e-30 119
MsaG025451 AT1G34670.1 49.541 109 54 1 5 112 14 122 5.10e-30 117
MsaG025451 AT2G32460.1 52.941 102 47 1 5 105 20 121 5.22e-30 119
MsaG025451 AT5G15310.4 42.958 142 74 2 5 139 14 155 5.37e-30 114
MsaG025451 AT3G02940.2 49.541 109 54 1 5 112 14 122 5.56e-30 116
MsaG025451 AT5G39700.1 47.475 99 52 0 6 104 57 155 5.80e-30 113
MsaG025451 AT4G21440.1 48.624 109 55 1 5 112 14 122 6.71e-30 117
MsaG025451 AT5G15310.2 42.958 142 74 2 5 139 14 155 8.59e-30 115
MsaG025451 AT5G15310.1 42.958 142 74 2 5 139 14 155 8.67e-30 116
MsaG025451 AT3G02940.1 49.541 109 54 1 5 112 14 122 9.81e-30 115
MsaG025451 AT3G02940.3 49.541 109 54 1 5 112 14 122 9.81e-30 115
MsaG025451 AT3G11440.2 50.980 102 49 1 5 105 43 144 1.23e-29 118
MsaG025451 AT4G05100.1 47.706 109 56 1 5 112 15 123 2.46e-29 114
MsaG025451 AT3G11440.3 50.980 102 49 1 5 105 43 144 2.51e-29 117
MsaG025451 AT3G11440.4 50.980 102 49 1 5 105 43 144 2.51e-29 117
MsaG025451 AT3G11440.1 50.980 102 49 1 5 105 43 144 2.51e-29 117
MsaG025451 AT1G22640.1 35.468 203 108 4 5 184 14 216 2.90e-29 113
MsaG025451 AT1G18710.1 47.706 109 56 1 5 112 14 122 3.19e-29 113
MsaG025451 AT3G01140.2 49.541 109 54 1 5 112 14 122 3.44e-29 114
MsaG025451 AT5G06100.1 50.980 102 49 1 5 105 34 135 3.70e-29 116
MsaG025451 AT3G01140.1 49.541 109 54 1 5 112 57 165 4.82e-29 115
MsaG025451 AT5G14750.1 50.000 102 50 1 5 105 18 119 4.99e-29 110
MsaG025451 AT3G60460.1 52.941 102 46 2 5 104 13 114 5.11e-29 113
MsaG025451 AT5G12870.1 50.000 106 52 1 5 109 20 125 5.50e-29 112
MsaG025451 AT5G26660.1 50.427 117 55 2 5 119 14 129 5.52e-29 114
MsaG025451 AT5G06100.5 50.980 102 49 1 5 105 34 135 5.77e-29 116
MsaG025451 AT5G06100.2 50.980 102 49 1 5 105 34 135 5.77e-29 116
MsaG025451 AT5G06100.3 50.980 102 49 1 5 105 34 135 5.77e-29 116
MsaG025451 AT5G06100.4 50.980 102 49 1 5 105 34 135 5.77e-29 116
MsaG025451 AT1G74430.1 47.706 109 56 1 5 112 14 122 5.90e-29 112
MsaG025451 AT1G09540.1 49.573 117 56 2 5 119 14 129 6.22e-29 114
MsaG025451 AT1G79180.1 49.600 125 60 2 5 126 16 140 6.59e-29 113
MsaG025451 AT5G40330.1 50.000 102 50 1 5 105 14 115 6.68e-29 111
MsaG025451 AT3G27920.1 44.853 136 64 4 5 132 16 148 7.18e-29 111
MsaG025451 AT3G61250.1 47.863 117 58 2 5 119 14 129 7.20e-29 113
MsaG025451 AT1G57560.2 50.427 117 55 2 5 119 14 129 7.90e-29 112
MsaG025451 AT4G38620.1 35.644 202 120 4 5 204 14 207 8.41e-29 112
MsaG025451 AT5G52600.1 50.980 102 49 1 5 105 14 115 8.52e-29 110
MsaG025451 AT1G56160.1 42.953 149 75 3 5 144 16 163 1.01e-28 112
MsaG025451 AT3G30210.1 46.281 121 60 2 5 124 29 145 1.07e-28 112
MsaG025451 AT1G57560.1 50.427 117 55 2 5 119 14 129 1.27e-28 112
MsaG025451 AT5G55020.1 51.485 101 48 1 5 104 28 128 1.35e-28 115
MsaG025451 AT1G18570.1 43.902 123 64 2 5 126 15 133 2.14e-28 112
MsaG025451 AT4G01680.3 51.376 109 52 1 5 112 14 122 2.93e-28 110
MsaG025451 AT2G36890.1 50.000 108 52 2 5 110 14 121 3.55e-28 111
MsaG025451 AT4G17785.2 48.182 110 54 2 5 112 15 123 3.84e-28 112
MsaG025451 AT1G08810.1 43.791 153 69 5 5 151 14 155 3.84e-28 110
MsaG025451 AT5G40360.1 44.643 112 61 1 5 116 158 268 4.01e-28 112
MsaG025451 AT4G17785.1 48.182 110 54 2 5 112 15 123 4.55e-28 112
MsaG025451 AT1G16490.1 50.459 109 45 2 5 108 16 120 4.88e-28 110
MsaG025451 AT5G62470.1 48.571 105 54 0 5 109 14 118 5.71e-28 111
MsaG025451 AT2G36890.2 50.000 108 52 2 5 110 55 162 6.13e-28 111
MsaG025451 AT4G13480.1 49.524 105 50 2 5 107 8 111 7.19e-28 109
MsaG025451 AT4G09460.1 43.846 130 70 2 5 131 14 143 7.31e-28 108
MsaG025451 AT4G01680.1 51.376 109 52 1 5 112 14 122 7.53e-28 110
MsaG025451 AT3G12720.1 50.000 110 52 2 5 112 24 132 7.56e-28 110
MsaG025451 AT5G14340.1 43.590 117 63 2 5 119 26 141 8.61e-28 109
MsaG025451 AT1G35515.1 47.706 109 56 1 5 112 14 122 1.07e-27 107
MsaG025451 AT3G24310.1 48.113 106 52 2 5 108 20 124 1.17e-27 108
MsaG025451 AT2G26960.1 52.475 101 47 1 5 104 22 122 1.20e-27 112
MsaG025451 AT3G23250.1 40.523 153 83 3 5 156 14 159 1.29e-27 109
MsaG025451 AT1G74080.1 44.000 125 65 3 5 128 14 134 1.52e-27 110
MsaG025451 AT5G62470.2 48.182 110 48 2 5 109 14 119 1.57e-27 110
MsaG025451 AT4G34990.1 47.414 116 60 1 5 119 14 129 1.67e-27 108
MsaG025451 AT4G37780.1 50.943 106 50 2 5 108 14 119 1.83e-27 109
MsaG025451 AT2G16720.1 48.673 113 49 2 5 112 14 122 2.27e-27 108
MsaG025451 AT3G12820.1 51.456 103 47 2 5 105 16 117 2.84e-27 107
MsaG025451 AT3G13890.2 41.667 132 76 1 5 135 14 145 3.00e-27 109
MsaG025451 AT4G25560.1 49.020 102 51 1 5 105 12 113 3.17e-27 108
MsaG025451 AT3G48920.1 49.505 101 50 1 5 104 20 120 4.92e-27 107
MsaG025451 AT3G08500.1 50.000 102 50 1 5 105 32 133 5.26e-27 108
MsaG025451 AT3G13540.1 40.714 140 74 2 1 131 21 160 5.30e-27 106
MsaG025451 AT1G63910.1 51.961 102 48 1 5 105 14 115 5.84e-27 109
MsaG025451 AT5G59780.3 46.078 102 54 1 5 105 10 111 8.11e-27 105
MsaG025451 AT3G28470.1 49.485 97 48 1 5 100 14 110 8.84e-27 107
MsaG025451 AT5G57620.1 49.515 103 50 2 5 105 14 116 9.32e-27 108
MsaG025451 AT5G07700.1 42.969 128 68 2 5 131 14 137 1.13e-26 107
MsaG025451 AT5G07700.2 42.969 128 68 2 5 131 14 137 1.13e-26 107
MsaG025451 AT1G06180.1 51.456 103 47 2 5 105 14 115 1.18e-26 105
MsaG025451 AT3G46130.1 47.059 102 53 1 5 105 11 112 1.30e-26 105
MsaG025451 AT5G61420.2 46.218 119 63 1 5 122 14 132 1.36e-26 108
MsaG025451 AT2G31180.1 48.077 104 53 1 5 107 14 117 1.52e-26 105
MsaG025451 AT5G65790.1 49.515 103 50 2 5 105 14 116 2.02e-26 107
MsaG025451 AT3G47600.1 48.113 106 46 2 5 105 14 115 2.10e-26 107
MsaG025451 AT1G74650.1 49.057 106 45 2 5 105 14 115 2.13e-26 107
MsaG025451 AT5G23000.1 50.485 103 49 2 5 105 14 116 2.22e-26 107
MsaG025451 AT5G40350.1 48.515 101 51 1 5 104 19 119 2.34e-26 104
MsaG025451 AT3G13890.1 40.426 141 74 2 5 135 14 154 2.49e-26 107
MsaG025451 AT5G07690.1 47.706 109 52 2 5 112 14 118 3.37e-26 106
MsaG025451 AT4G01680.2 47.107 121 51 2 5 112 14 134 3.37e-26 106
MsaG025451 AT3G28910.1 45.133 113 53 2 5 112 14 122 5.80e-26 105
MsaG025451 AT1G25340.1 41.284 109 63 1 5 112 20 128 1.09e-25 103
MsaG025451 AT1G25340.2 41.667 108 59 1 5 112 20 123 1.41e-25 103
MsaG025451 AT4G00540.2 49.038 104 50 1 5 105 103 206 1.83e-25 105
MsaG025451 AT1G25340.3 41.667 108 59 1 5 112 20 123 1.95e-25 103
MsaG025451 AT3G49690.1 48.544 103 51 2 5 105 14 116 2.15e-25 103
MsaG025451 AT3G01530.1 37.349 166 97 3 5 167 27 188 2.15e-25 101
MsaG025451 AT3G27810.1 47.525 101 52 1 5 104 22 122 2.64e-25 101
MsaG025451 AT2G47190.1 43.750 112 62 1 2 112 19 130 3.60e-25 102
MsaG025451 AT4G00540.1 49.038 104 50 1 5 105 101 204 3.70e-25 105
MsaG025451 AT4G12350.1 43.697 119 64 2 5 121 14 131 7.72e-25 102
MsaG025451 AT4G22680.1 43.697 119 64 2 5 121 14 131 1.08e-24 100
MsaG025451 AT3G62610.1 47.059 102 53 1 5 105 14 115 2.07e-24 101
MsaG025451 AT1G79180.2 39.873 158 59 3 5 126 16 173 2.29e-24 101
MsaG025451 AT3G53200.1 49.020 102 51 1 5 105 11 112 3.27e-24 99.0
MsaG025451 AT5G35550.1 44.118 102 56 1 5 105 16 117 3.80e-24 99.4
MsaG025451 AT1G66230.1 42.735 117 64 2 5 119 14 129 6.09e-24 99.4
MsaG025451 AT5G16600.1 41.270 126 71 2 5 128 14 138 6.99e-24 100
MsaG025451 AT5G52260.1 47.573 103 51 2 5 105 14 115 7.76e-24 98.6
MsaG025451 AT1G68320.1 39.450 109 65 1 5 112 21 129 9.42e-24 99.0
MsaG025451 AT2G25230.1 44.898 98 52 2 8 104 29 125 1.13e-23 97.4
MsaG025451 AT2G47460.1 40.164 122 68 2 5 125 14 131 2.15e-23 99.4
MsaG025451 AT2G26950.1 35.714 140 78 3 5 136 18 153 3.54e-23 99.0
MsaG025451 AT1G48000.1 39.167 120 71 2 5 123 34 152 5.35e-23 95.9
MsaG025451 AT5G62320.1 45.299 117 54 3 5 112 15 130 5.92e-23 95.9
MsaG025451 AT5G49330.1 46.078 102 54 1 5 105 14 115 6.25e-23 97.8
MsaG025451 AT2G02820.2 40.404 99 59 0 8 106 33 131 4.06e-22 96.7
MsaG025451 AT2G02820.1 40.404 99 59 0 8 106 33 131 4.95e-22 96.3
MsaG025451 AT3G06490.1 41.593 113 65 1 1 112 17 129 5.30e-22 94.7
MsaG025451 AT2G02820.3 40.816 98 58 0 8 105 33 130 5.43e-22 94.7
MsaG025451 AT5G49620.1 41.593 113 65 1 1 112 24 136 8.75e-22 94.0
MsaG025451 AT5G14750.3 55.882 68 30 0 38 105 18 85 1.35e-21 90.1
MsaG025451 AT1G14350.2 36.290 124 78 1 8 130 28 151 2.77e-21 94.0
MsaG025451 AT1G14350.1 36.290 124 78 1 8 130 28 151 2.77e-21 94.0
MsaG025451 AT1G66370.1 38.983 118 58 3 5 112 10 123 4.02e-21 90.9
MsaG025451 AT5G26660.2 52.439 82 39 0 38 119 17 98 1.70e-20 90.5
MsaG025451 AT3G12820.2 57.353 68 29 0 38 105 2 69 3.75e-20 87.0
MsaG025451 AT5G40350.2 53.731 67 31 0 38 104 8 74 2.52e-19 84.0
MsaG025451 AT5G59780.2 50.000 68 34 0 38 105 23 90 3.69e-19 84.7
MsaG025451 AT3G46130.4 50.000 68 34 0 38 105 23 90 7.82e-19 84.3
MsaG025451 AT3G46130.3 50.000 68 34 0 38 105 13 80 8.19e-19 84.0
MsaG025451 AT5G40430.1 38.835 103 62 1 2 104 51 152 9.13e-19 84.7
MsaG025451 AT1G66380.1 41.509 106 53 2 5 105 10 111 1.20e-18 81.3
MsaG025451 AT5G35550.2 50.000 78 37 1 30 105 43 120 1.78e-18 84.0
MsaG025451 AT3G27810.2 52.239 67 32 0 38 104 7 73 3.04e-18 81.3
MsaG025451 AT5G49620.2 37.008 127 65 2 1 112 24 150 3.09e-18 84.3
MsaG025451 AT3G53200.2 52.941 68 32 0 38 105 12 79 6.73e-18 81.3
MsaG025451 AT1G56650.1 37.398 123 65 3 5 119 10 128 6.89e-18 82.0
MsaG025451 AT1G71030.1 48.611 72 37 0 41 112 19 90 1.89e-17 79.7
MsaG025451 AT1G71030.2 48.611 72 37 0 41 112 5 76 2.24e-17 79.0
MsaG025451 AT1G66390.1 40.566 106 54 2 5 105 10 111 4.71e-17 79.7
MsaG025451 AT3G18100.1 42.553 94 54 0 5 98 546 639 5.24e-17 82.4
MsaG025451 AT3G18100.3 42.553 94 54 0 5 98 498 591 5.67e-17 82.0
MsaG025451 AT1G18960.1 38.793 116 67 3 5 119 10 122 6.33e-17 80.1
MsaG025451 AT3G18100.2 42.553 94 54 0 5 98 333 426 8.26e-17 81.6
MsaG025451 AT3G18100.4 42.553 94 54 0 5 98 385 478 8.68e-17 81.6
MsaG025451 AT3G47600.2 51.471 68 33 0 38 105 42 109 2.45e-16 79.0
MsaG025451 AT1G22640.3 32.911 158 84 3 49 184 2 159 2.18e-15 73.9
MsaG025451 AT5G14750.4 50.000 58 29 0 49 106 2 59 5.95e-14 68.6
MsaG025451 AT5G14750.2 50.000 58 29 0 49 106 2 59 5.95e-14 68.6
MsaG025451 AT2G37630.1 38.298 94 55 1 8 98 7 100 1.60e-13 70.9
MsaG025451 AT1G66380.3 45.455 77 42 0 29 105 2 78 4.25e-13 65.1
MsaG025451 AT3G23250.2 37.037 108 61 2 49 156 2 102 1.48e-11 63.5
MsaG025451 AT4G25560.2 55.556 45 20 0 61 105 3 47 2.46e-11 62.8

Find 86 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGTGCTTCATCTTCTTC+TGG 0.229752 5:+8522081 None:intergenic
AATTCTCCCGGTTCTCCTTC+TGG 0.286949 5:-8521691 MsaT025451.1:CDS
AACTCCGCACTAAAACTAAA+TGG 0.322665 5:+8521322 None:intergenic
GGCGGTGGTGGCGGAGGAGG+TGG 0.328429 5:+8521430 None:intergenic
ATCAGAGCCCATGCTCGATT+TGG 0.330164 5:-8521904 MsaT025451.1:CDS
TCGTTATCACTTTCACTTCC+TGG 0.331571 5:-8521517 MsaT025451.1:CDS
CTTATAATCGACCAGTTTCT+CGG 0.347069 5:+8522036 None:intergenic
GGTGGTGGCGGAGGAGGTGG+TGG 0.378626 5:+8521433 None:intergenic
GGGATTGCACTTGGCGGTGG+TGG 0.382209 5:+8521418 None:intergenic
CTTGGCGGTGGTGGCGGAGG+AGG 0.384829 5:+8521427 None:intergenic
AAATCGATACCAGGCCGGTC+AGG 0.386022 5:-8522012 MsaT025451.1:CDS
AGAAGCACGGGCCGAGAAAC+TGG 0.390908 5:-8522047 MsaT025451.1:CDS
AATGCTTTGGTGAAGCGAAT+TGG 0.396166 5:-8521193 MsaT025451.1:CDS
AGAAGGAGAACCGGGAGAAT+TGG 0.404688 5:+8521693 None:intergenic
ATTATAGTATCATCCTCTTC+AGG 0.406195 5:+8521925 None:intergenic
ATCGGATCCAGAAGGAGAAC+CGG 0.406231 5:+8521684 None:intergenic
GCTGCTATTCCTGTTTCTAC+TGG 0.408564 5:-8521730 MsaT025451.1:CDS
ATTGCACTTGGCGGTGGTGG+CGG 0.409102 5:+8521421 None:intergenic
TCTTAATAGCGTTATCAGTT+CGG 0.416198 5:+8521845 None:intergenic
GCACTTGGCGGTGGTGGCGG+AGG 0.418008 5:+8521424 None:intergenic
ATCGGAACCGCCATCGGAAC+AGG 0.421410 5:+8521367 None:intergenic
GAGGAGTTACATGGCGGGAT+TGG 0.427475 5:-8521263 MsaT025451.1:CDS
GGCGGTTCCGATGCAACAAT+CGG 0.428107 5:-8521356 MsaT025451.1:CDS
TCACTTTCACTTCCTGGTGT+TGG 0.437127 5:-8521511 MsaT025451.1:CDS
TTCACCACAAGTTGAGCATC+GGG 0.439155 5:-8521956 MsaT025451.1:CDS
ATGCTCGATTTGGAAACAAA+TGG 0.440299 5:-8521894 MsaT025451.1:CDS
GGTGGTGGTACAGTGTTAAC+AGG 0.444783 5:+8521448 None:intergenic
AGTGAAAGTGATAACGAAGT+TGG 0.453529 5:+8521523 None:intergenic
TCATCTTCTTCTGGACTCCA+TGG 0.458499 5:+8522090 None:intergenic
ATATAAAGACCAGTAGAAAC+AGG 0.460718 5:+8521721 None:intergenic
AAGTGCAATCCCTTTGATTC+CGG 0.462668 5:-8521407 MsaT025451.1:CDS
GGAACAGCCGTAGTCATTAC+CGG 0.463029 5:+8521388 None:intergenic
ATAACGCTATTAAGAATCAT+TGG 0.466304 5:-8521837 MsaT025451.1:CDS
CATGATTTCCCTGACCGGCC+TGG 0.488596 5:+8522003 None:intergenic
GGATGGAATTAGGAATGCTT+TGG 0.501843 5:-8521206 MsaT025451.1:CDS
GTCGTTTCTACGAGTGGTAG+AGG 0.505072 5:+8521580 None:intergenic
TGCTCGATTTGGAAACAAAT+GGG 0.505863 5:-8521893 MsaT025451.1:CDS
ATCTGCATGATTTCCCTGAC+CGG 0.511247 5:+8521998 None:intergenic
TTTGATTCCGGTAATGACTA+CGG 0.511896 5:-8521395 MsaT025451.1:CDS
ATTTGTTTCCAAATCGAGCA+TGG 0.512519 5:+8521896 None:intergenic
CGGGATTGGAGCAACAGAAT+GGG 0.516969 5:-8521249 MsaT025451.1:CDS
TATATTAACGCCAATTCTCC+CGG 0.517220 5:-8521703 MsaT025451.1:CDS
TACGGCTGTTCCTGTTCCGA+TGG 0.523658 5:-8521377 MsaT025451.1:CDS
GCGGGATTGGAGCAACAGAA+TGG 0.529381 5:-8521250 MsaT025451.1:CDS
TGTTGCATCGGAACCGCCAT+CGG 0.532631 5:+8521361 None:intergenic
GCGGTTCCGATGCAACAATC+GGG 0.533201 5:-8521355 MsaT025451.1:CDS
TTTCACCACAAGTTGAGCAT+CGG 0.539872 5:-8521957 MsaT025451.1:CDS
AAAGGGATTGCACTTGGCGG+TGG 0.540288 5:+8521415 None:intergenic
GTAGTCATTACCGGAATCAA+AGG 0.543559 5:+8521397 None:intergenic
GCGACGGTTCTCGTTGGCAC+AGG 0.545873 5:+8521604 None:intergenic
ACTGATCCCGATTGTTGCAT+CGG 0.546146 5:+8521349 None:intergenic
ATCAAAGGGATTGCACTTGG+CGG 0.547462 5:+8521412 None:intergenic
GCCCGATAAAAGCCTGGCTA+TGG 0.547611 5:+8521867 None:intergenic
ACAAATGGGCTACCATAGCC+AGG 0.551027 5:-8521879 MsaT025451.1:CDS
GGAGTTGTTGAGTGTGATGC+AGG 0.552988 5:-8521305 MsaT025451.1:CDS
TTTGTTTCCAAATCGAGCAT+GGG 0.553033 5:+8521897 None:intergenic
GGCTGTTCCTGTTCCGATGG+CGG 0.555350 5:-8521374 MsaT025451.1:CDS
AATCGATACCAGGCCGGTCA+GGG 0.556383 5:-8522011 MsaT025451.1:CDS
AAAGAAATGGATCGGATCAA+AGG 0.563795 5:-8522114 None:intergenic
GGAATCAAAGGGATTGCACT+TGG 0.564789 5:+8521409 None:intergenic
GAAAGTGATAACGAAGTTGG+AGG 0.565252 5:+8521526 None:intergenic
GAAGAATCGACACCAACACC+AGG 0.574919 5:+8521499 None:intergenic
TCGGATCCAGAAGGAGAACC+GGG 0.576563 5:+8521685 None:intergenic
AGTTCGGCCCGATAAAAGCC+TGG 0.578285 5:+8521861 None:intergenic
TTAACAGAAAAGAAATGGAT+CGG 0.584436 5:-8522122 None:intergenic
TAGTCATTACCGGAATCAAA+GGG 0.591280 5:+8521398 None:intergenic
TGTTAACAGGCTCAGTTACA+CGG 0.599320 5:+8521461 None:intergenic
TTAATATGAGTGTTCACGAT+AGG 0.603916 5:+8521643 None:intergenic
TTGAAAAGATCTGTTAGTGC+TGG 0.605131 5:-8521754 MsaT025451.1:CDS
TGGATCGGATCAAAGGTCCA+TGG 0.609523 5:-8522107 MsaT025451.1:CDS
TACGAGTGGTAGAGGCGCGA+CGG 0.610707 5:+8521588 None:intergenic
CGGTTCTCGTTGGCACAGGT+CGG 0.612535 5:+8521608 None:intergenic
GACGACGTCGTTTCTACGAG+TGG 0.617236 5:+8521574 None:intergenic
AAAGCCCGATGCTCAACTTG+TGG 0.622271 5:+8521952 None:intergenic
AACAGAGGTGAGGAGTTACA+TGG 0.624499 5:-8521272 MsaT025451.1:CDS
AGAGGCGCGACGGTTCTCGT+TGG 0.636991 5:+8521598 None:intergenic
ATTATAAGCAAATCGATACC+AGG 0.644340 5:-8522021 MsaT025451.1:CDS
TAAGCAAATCGATACCAGGC+CGG 0.650239 5:-8522017 MsaT025451.1:CDS
GGAAATCATGCAGATTACGT+TGG 0.658062 5:-8521990 MsaT025451.1:CDS
TCACTCACATCGGATCCAGA+AGG 0.658892 5:+8521676 None:intergenic
AGTGTTCACGATAGGTACGC+TGG 0.659015 5:+8521651 None:intergenic
GCAGGAGATGATTAGAACAG+AGG 0.661967 5:-8521287 MsaT025451.1:CDS
GAGGTGAGGAGTTACATGGC+GGG 0.665524 5:-8521268 MsaT025451.1:CDS
TACGCTGGACTCACTCACAT+CGG 0.668641 5:+8521666 None:intergenic
AGATGATTAGAACAGAGGTG+AGG 0.690040 5:-8521282 MsaT025451.1:CDS
AGAGGTGAGGAGTTACATGG+CGG 0.733534 5:-8521269 MsaT025451.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 8521171 8522130 8521171 ID=MsaG025451
Chr5 mRNA 8521171 8522130 8521171 ID=MsaT025451.1;Parent=MsaG025451
Chr5 exon 8521171 8522130 8521171 ID=MsaT025451.1.exon1;Parent=MsaT025451.1
Chr5 CDS 8521171 8522130 8521171 ID=cds.MsaT025451.1;Parent=MsaT025451.1
Gene Sequence

>MsaT025451.1

ATGGATCGGATCAAAGGTCCATGGAGTCCAGAAGAAGATGAAGCACTTCAAAAACTCGTGGAGAAGCACGGGCCGAGAAACTGGTCGATTATAAGCAAATCGATACCAGGCCGGTCAGGGAAATCATGCAGATTACGTTGGTGTAATCAGCTTTCACCACAAGTTGAGCATCGGGCTTTTACGCCTGAAGAGGATGATACTATAATCAGAGCCCATGCTCGATTTGGAAACAAATGGGCTACCATAGCCAGGCTTTTATCGGGCCGAACTGATAACGCTATTAAGAATCATTGGAACTCTACTTTGAAACGTAAGTGTTCTTCTATTATGATTGATGATTCTGAATCTCCACCGTTGAAAAGATCTGTTAGTGCTGGTGCTGCTATTCCTGTTTCTACTGGTCTTTATATTAACGCCAATTCTCCCGGTTCTCCTTCTGGATCCGATGTGAGTGAGTCCAGCGTACCTATCGTGAACACTCATATTAACTCTCATGTTTACCGACCTGTGCCAACGAGAACCGTCGCGCCTCTACCACTCGTAGAAACGACGTCGTCTTCGAAATCTTCGAAATCAAACGATCCTCCAACTTCGTTATCACTTTCACTTCCTGGTGTTGGTGTCGATTCTTCTTCTGAAGATTCAAACCGTGTAACTGAGCCTGTTAACACTGTACCACCACCTCCTCCGCCACCACCGCCAAGTGCAATCCCTTTGATTCCGGTAATGACTACGGCTGTTCCTGTTCCGATGGCGGTTCCGATGCAACAATCGGGATCAGTGATGCCATTTAGTTTTAGTGCGGAGTTGTTGAGTGTGATGCAGGAGATGATTAGAACAGAGGTGAGGAGTTACATGGCGGGATTGGAGCAACAGAATGGGATGTGTTTTCAAAAAGCTGAGGATGGAATTAGGAATGCTTTGGTGAAGCGAATTGGAATTAGCAGAATCGATTCGTAA
Protein sequence

>MsaT025451.1

MDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDSESPPLKRSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHINSHVYRPVPTRTVAPLPLVETTSSSKSSKSNDPPTSLSLSLPGVGVDSSSEDSNRVTEPVNTVPPPPPPPPPSAIPLIPVMTTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAEDGIRNALVKRIGISRIDS*