AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025584


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025584 MtrunA17_Chr5g0403241 96.284 1507 44 1 1 1495 1 1507 0.0 3026
MsaG025584 MtrunA17_Chr4g0075321 68.035 341 104 3 1158 1495 726 1064 1.42e-133 441
MsaG025584 MtrunA17_Chr4g0075321 42.483 572 256 9 103 665 34 541 1.15e-125 419
MsaG025584 MtrunA17_Chr4g0075321 60.000 125 50 0 819 943 554 678 5.56e-40 162
MsaG025584 MtrunA17_Chr8g0373821 63.009 319 104 5 1176 1490 225 533 1.65e-124 399
MsaG025584 MtrunA17_Chr8g0373821 33.659 205 123 2 464 662 36 233 5.55e-29 123
MsaG025584 MtrunA17_Chr8g0373841 54.307 267 99 6 817 1067 226 485 4.75e-80 273
MsaG025584 MtrunA17_Chr8g0373841 35.294 170 99 3 505 674 60 218 2.10e-21 99.8
MsaG025584 MtrunA17_Chr8g0373891 55.556 216 83 2 123 336 59 263 1.94e-75 251
MsaG025584 MtrunA17_Chr5g0399801 35.000 320 144 9 1199 1495 811 1089 3.93e-42 169
MsaG025584 MtrunA17_Chr4g0003501 35.404 322 145 10 1196 1495 675 955 1.72e-41 166
MsaG025584 MtrunA17_Chr4g0003511 35.185 324 145 11 1196 1495 770 1052 1.88e-40 163
MsaG025584 MtrunA17_Chr7g0255181 33.226 310 160 13 1195 1494 432 704 8.98e-33 137
MsaG025584 MtrunA17_Chr8g0354821 31.642 335 162 12 1188 1494 392 687 2.66e-31 132
MsaG025584 MtrunA17_Chr3g0080761 32.198 323 165 10 1195 1494 372 663 1.66e-30 129
MsaG025584 MtrunA17_Chr1g0170651 32.362 309 154 8 1192 1495 288 546 4.59e-29 124
MsaG025584 MtrunA17_Chr1g0190311 38.587 184 105 6 1315 1491 458 640 9.81e-28 121
MsaG025584 MtrunA17_Chr6g0476121 28.788 330 171 9 1195 1495 349 643 8.13e-27 118
MsaG025584 MtrunA17_Chr7g0252211 27.964 329 175 8 1195 1495 463 757 2.22e-26 117
MsaG025584 MtrunA17_Chr7g0232811 33.333 201 92 4 1332 1495 344 539 8.76e-26 114
MsaG025584 MtrunA17_Chr1g0183321 38.043 184 105 6 1315 1491 561 742 1.24e-25 114
MsaG025584 MtrunA17_Chr6g0476111 28.485 330 172 10 1195 1495 400 694 1.67e-25 114
MsaG025584 MtrunA17_Chr6g0477001 38.919 185 91 6 1313 1494 85 250 1.29e-24 107
MsaG025584 MtrunA17_Chr3g0125251 35.714 182 100 4 1315 1494 1298 1464 3.63e-24 111
MsaG025584 MtrunA17_Chr7g0232981 34.973 183 99 3 1332 1495 335 516 1.01e-23 107
MsaG025584 MtrunA17_Chr2g0305371 35.227 176 96 4 1319 1494 314 471 1.26e-23 107
MsaG025584 MtrunA17_Chr7g0262001 37.736 159 96 3 1315 1471 517 674 1.45e-23 108
MsaG025584 MtrunA17_Chr1g0201311 36.000 175 93 4 1322 1494 66 223 1.14e-22 103
MsaG025584 MtrunA17_Chr7g0232841 32.338 201 93 4 1333 1495 333 528 3.26e-22 102
MsaG025584 MtrunA17_Chr1g0201621 35.429 175 94 4 1322 1494 66 223 4.93e-22 101
MsaG025584 MtrunA17_Chr8g0368901 33.498 203 114 7 1298 1484 572 769 1.01e-20 99.0
MsaG025584 MtrunA17_Chr8g0368911 30.622 209 125 5 1298 1490 565 769 4.20e-20 97.1
MsaG025584 MtrunA17_Chr4g0075341 58.108 74 31 0 849 922 294 367 1.41e-19 92.8
MsaG025584 MtrunA17_Chr4g0075341 30.208 192 106 8 466 650 8 178 1.19e-11 68.6
MsaG025584 MtrunA17_Chr6g0460921 29.752 242 138 5 1255 1494 208 419 3.45e-19 92.4
MsaG025584 MtrunA17_Chr8g0369301 30.978 184 109 4 1298 1467 552 731 4.05e-19 94.0
MsaG025584 MtrunA17_Chr6g0467531 26.573 286 166 6 1195 1468 306 559 1.41e-18 91.7
MsaG025584 MtrunA17_Chr6g0467381 26.573 286 166 6 1195 1468 306 559 2.27e-18 90.9
MsaG025584 MtrunA17_Chr6g0467421 30.000 180 113 3 1301 1468 381 559 2.82e-18 90.5
MsaG025584 MtrunA17_Chr1g0163051 32.500 200 115 6 1300 1483 463 658 4.03e-18 90.5
MsaG025584 MtrunA17_Chr1g0149611 33.125 160 83 4 1342 1494 365 507 5.61e-18 89.4
MsaG025584 MtrunA17_Chr2g0306961 28.889 180 115 3 1301 1468 280 458 1.88e-17 87.4
MsaG025584 MtrunA17_Chr6g0467411 30.939 181 110 4 1301 1468 299 477 2.32e-17 87.0
MsaG025584 MtrunA17_Chr3g0094881 29.834 181 114 3 1300 1468 439 618 2.66e-17 87.8
MsaG025584 MtrunA17_Chr1g0149581 31.250 160 86 4 1342 1494 1523 1665 3.84e-17 88.2
MsaG025584 MtrunA17_Chr6g0467401 26.224 286 167 6 1195 1468 306 559 4.22e-17 86.7
MsaG025584 MtrunA17_Chr2g0297191 35.220 159 77 6 1341 1494 1033 1170 8.55e-17 86.7
MsaG025584 MtrunA17_Chr1g0163041 33.962 159 87 4 1300 1444 382 536 9.45e-16 82.4
MsaG025584 MtrunA17_Chr7g0232751 39.785 93 49 2 1410 1495 27 119 4.53e-14 70.1
MsaG025584 MtrunA17_Chr1g0147121 32.667 150 76 6 1351 1494 903 1033 2.05e-12 72.4
MsaG025584 MtrunA17_Chr7g0232871 36.047 86 49 2 1333 1418 16 95 2.43e-12 65.1
MsaG025584 MtrunA17_Chr1g0194631 28.966 145 86 2 1329 1473 599 726 7.36e-12 70.5
MsaG025584 MtrunA17_Chr5g0401921 27.517 149 91 2 1326 1474 700 831 1.55e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025584 AT2G23740.3 49.505 1414 624 20 110 1494 29 1381 0.0 1315
MsaG025584 AT2G23740.6 49.505 1414 624 20 110 1494 29 1381 0.0 1315
MsaG025584 AT2G23740.2 49.505 1414 624 20 110 1494 29 1381 0.0 1315
MsaG025584 AT2G23740.1 49.364 1414 619 21 110 1494 29 1374 0.0 1305
MsaG025584 AT2G23740.4 49.369 1347 595 19 110 1430 29 1314 0.0 1246
MsaG025584 AT2G23740.5 49.369 1347 595 19 110 1430 29 1314 0.0 1246
MsaG025584 AT2G22740.2 36.937 222 110 5 1298 1495 575 790 1.03e-36 150
MsaG025584 AT2G22740.1 36.937 222 110 5 1298 1495 575 790 1.03e-36 150
MsaG025584 AT2G35160.5 32.792 308 147 11 1196 1495 503 758 1.46e-35 147
MsaG025584 AT2G35160.2 32.792 308 147 11 1196 1495 539 794 2.23e-35 146
MsaG025584 AT2G35160.3 32.792 308 147 11 1196 1495 539 794 2.23e-35 146
MsaG025584 AT2G35160.1 32.792 308 147 11 1196 1495 539 794 2.23e-35 146
MsaG025584 AT2G35160.4 32.792 308 147 11 1196 1495 539 794 2.23e-35 146
MsaG025584 AT1G73100.1 30.330 333 167 10 1188 1494 375 668 2.28e-31 133
MsaG025584 AT5G04940.2 30.000 340 170 12 1182 1494 371 669 1.37e-28 124
MsaG025584 AT5G04940.1 30.000 340 170 12 1182 1494 371 669 1.37e-28 124
MsaG025584 AT5G13960.1 30.030 333 162 10 1195 1495 331 624 6.43e-28 121
MsaG025584 AT5G13960.2 30.746 335 157 12 1195 1495 197 490 8.19e-28 119
MsaG025584 AT3G04380.6 34.715 193 116 5 1305 1491 243 431 1.52e-27 118
MsaG025584 AT3G04380.5 34.715 193 116 5 1305 1491 227 415 1.58e-27 118
MsaG025584 AT3G04380.2 34.715 193 116 5 1305 1491 243 431 1.76e-27 118
MsaG025584 AT3G04380.3 34.715 193 116 5 1305 1491 254 442 2.19e-27 118
MsaG025584 AT3G04380.4 34.715 193 116 5 1305 1491 270 458 2.57e-27 118
MsaG025584 AT3G04380.1 34.715 193 116 5 1305 1491 270 458 2.59e-27 118
MsaG025584 AT1G17770.1 29.006 362 174 16 1168 1494 379 692 7.24e-26 115
MsaG025584 AT1G77300.1 35.714 182 100 4 1315 1494 1000 1166 3.77e-25 114
MsaG025584 AT1G77300.2 35.714 182 100 4 1315 1494 1000 1166 5.30e-25 114
MsaG025584 AT3G03750.2 35.500 200 112 4 1311 1494 151 349 3.32e-24 106
MsaG025584 AT1G04050.3 36.264 182 106 6 1316 1491 438 615 8.60e-23 105
MsaG025584 AT1G04050.2 36.264 182 106 6 1316 1491 542 719 1.00e-22 105
MsaG025584 AT1G04050.1 36.264 182 106 6 1316 1491 542 719 1.00e-22 105
MsaG025584 AT5G43990.8 35.676 185 102 6 1316 1491 457 633 5.52e-22 103
MsaG025584 AT5G43990.12 35.676 185 102 6 1316 1491 457 633 5.52e-22 103
MsaG025584 AT5G43990.6 35.676 185 102 6 1316 1491 457 633 5.52e-22 103
MsaG025584 AT5G43990.13 35.676 185 102 6 1316 1491 457 633 5.52e-22 103
MsaG025584 AT5G43990.7 35.678 199 105 8 1308 1491 423 613 5.91e-22 103
MsaG025584 AT5G43990.9 35.676 185 102 6 1316 1491 549 725 6.30e-22 103
MsaG025584 AT5G43990.2 35.676 185 102 6 1316 1491 549 725 6.30e-22 103
MsaG025584 AT5G43990.3 35.676 185 102 6 1316 1491 526 702 6.47e-22 103
MsaG025584 AT5G43990.11 35.676 185 102 6 1316 1491 526 702 6.47e-22 103
MsaG025584 AT5G43990.1 35.676 185 102 6 1316 1491 526 702 6.47e-22 103
MsaG025584 AT5G43990.4 35.676 185 102 6 1316 1491 526 702 6.47e-22 103
MsaG025584 AT5G43990.15 35.676 185 102 6 1316 1491 529 705 7.29e-22 103
MsaG025584 AT5G43990.10 35.676 185 102 6 1316 1491 529 705 7.29e-22 103
MsaG025584 AT5G43990.16 35.676 185 102 6 1316 1491 506 682 7.84e-22 102
MsaG025584 AT5G43990.5 35.676 185 102 6 1316 1491 506 682 7.84e-22 102
MsaG025584 AT5G43990.17 35.676 185 102 6 1316 1491 506 682 7.84e-22 102
MsaG025584 AT5G43990.14 35.676 185 102 6 1316 1491 506 682 7.84e-22 102
MsaG025584 AT4G30860.1 34.091 176 98 4 1319 1494 307 464 1.24e-21 100
MsaG025584 AT4G13460.1 27.018 285 162 9 1199 1471 386 636 3.23e-20 97.4
MsaG025584 AT4G13460.2 27.018 285 162 9 1199 1471 386 636 3.23e-20 97.4
MsaG025584 AT2G24740.1 28.037 321 159 12 1199 1494 481 754 4.74e-20 97.4
MsaG025584 AT1G76710.4 33.908 174 96 3 1323 1494 72 228 1.08e-19 95.1
MsaG025584 AT1G76710.2 33.908 174 96 3 1323 1494 72 228 1.11e-19 95.1
MsaG025584 AT1G76710.1 33.908 174 96 3 1323 1494 72 228 1.11e-19 95.1
MsaG025584 AT1G76710.3 33.908 174 96 3 1323 1494 72 228 1.41e-19 94.7
MsaG025584 AT3G59960.3 35.065 154 84 3 1341 1494 112 249 1.16e-18 88.6
MsaG025584 AT3G59960.2 35.065 154 84 3 1341 1494 112 249 1.16e-18 88.6
MsaG025584 AT3G59960.4 35.065 154 84 3 1341 1494 112 249 1.16e-18 88.6
MsaG025584 AT3G59960.1 35.065 154 84 3 1341 1494 112 249 1.54e-18 89.4
MsaG025584 AT2G33290.1 28.571 301 161 10 1199 1483 388 650 2.14e-18 91.7
MsaG025584 AT2G33290.3 28.571 301 161 10 1199 1483 388 650 2.14e-18 91.7
MsaG025584 AT2G33290.4 28.571 301 161 10 1199 1483 388 650 2.14e-18 91.7
MsaG025584 AT2G33290.2 28.571 301 161 10 1199 1483 388 650 2.14e-18 91.7
MsaG025584 AT2G44150.1 35.065 154 84 4 1341 1494 117 254 3.08e-17 85.9
MsaG025584 AT5G42400.7 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.2 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.8 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.5 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.4 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.1 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.3 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT5G42400.6 36.986 146 70 6 1352 1494 1261 1387 7.18e-17 87.4
MsaG025584 AT4G27910.1 34.641 153 69 6 1351 1494 896 1026 1.18e-14 80.1
MsaG025584 AT3G03750.1 31.000 200 105 6 1311 1494 151 333 1.63e-14 77.4
MsaG025584 AT3G61740.1 30.952 168 90 5 1334 1494 869 1017 1.02e-13 77.0
MsaG025584 AT3G61740.2 30.952 168 90 5 1334 1494 833 981 1.03e-13 77.0
MsaG025584 AT2G23380.1 27.064 218 110 8 1258 1474 700 869 2.45e-13 75.9
MsaG025584 AT2G23380.2 27.064 218 110 8 1258 1474 473 642 3.86e-13 74.7
MsaG025584 AT4G02020.1 28.966 145 86 3 1329 1473 696 823 2.09e-11 69.3

Find 353 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCCTCTTTATAGTATTT+TGG 0.049362 5:-10195984 None:intergenic
TGTAATGGTTATTCTGATTT+TGG 0.177315 5:+10194642 MsaT025584.1:CDS
GTCTGAAAAGCTCTATTTAA+AGG 0.182628 5:+10197549 MsaT025584.1:CDS
AATTTCTGAAAACAAAATTT+TGG 0.190302 5:-10197419 None:intergenic
ACACCAGCCATTTCATTTAT+AGG 0.200031 5:-10195670 None:intergenic
TTATCGATGCTATGATTAAT+TGG 0.202467 5:-10196630 None:intergenic
CCAAGGGATTGATCAATTAT+TGG 0.203771 5:-10197967 None:intergenic
CCAGGGAAATTCTGCCTCTT+TGG 0.208085 5:+10197016 MsaT025584.1:CDS
GGTTGTGGTTCTTCTATTAC+AGG 0.223045 5:-10196588 None:intergenic
GTAGTTGAGGCTGCTGATTC+TGG 0.229312 5:+10195616 MsaT025584.1:CDS
CTGAATGCATCGCTTTAAAT+TGG 0.233590 5:-10197293 None:intergenic
TACAATATTATTCCATTTAT+CGG 0.240163 5:-10195596 None:intergenic
AGTCTTTAAAACAGAGAAAA+AGG 0.244619 5:+10199032 MsaT025584.1:CDS
CCATTTATCGGTCAGGTTAC+TGG 0.244667 5:-10195584 None:intergenic
GCCTCATTGGAAGAGAAATT+TGG 0.247502 5:+10197520 MsaT025584.1:CDS
CCCTGGTTTGTTTAAGAATC+AGG 0.258753 5:+10195486 MsaT025584.1:CDS
CTCAGCAAATGCTGAAAATT+CGG 0.259438 5:+10195828 MsaT025584.1:CDS
TCACCAGTTCAACCAATATT+AGG 0.259776 5:+10195241 MsaT025584.1:CDS
GATTGTCCTCAACGCGGTTC+TGG 0.267350 5:+10193403 MsaT025584.1:CDS
TCTCCTTCCCTACCGTTATT+TGG 0.267546 5:-10193745 None:intergenic
TTGGAAGTTCTGAACAATTA+TGG 0.270767 5:+10196895 MsaT025584.1:CDS
TACAGCATTCTTCTCACTCT+TGG 0.272812 5:+10194896 MsaT025584.1:CDS
AAATGTTGAACAAGCTAAAT+TGG 0.273745 5:+10193465 MsaT025584.1:CDS
TTTAACAAGTTACAACCTTT+TGG 0.276834 5:-10197634 None:intergenic
ATTCCTTGTGGGAGTCATTT+TGG 0.281666 5:+10196876 MsaT025584.1:CDS
TTCCATTCAGAACCTAATAT+TGG 0.283266 5:-10195253 None:intergenic
CCTTTAGCATCTCTTCCTAA+TGG 0.283617 5:+10197676 MsaT025584.1:CDS
TAGAAGCATCAATCACATAT+TGG 0.289742 5:-10199397 None:intergenic
AAAAGGTTGTAACTTGTTAA+AGG 0.291109 5:+10197636 MsaT025584.1:CDS
TATACATGACCACATGTTTC+AGG 0.291863 5:-10198379 None:intergenic
ATCTGATCCGTTTCAGTATA+AGG 0.294231 5:-10195949 None:intergenic
CGCATACAAAGATTTATTCT+TGG 0.297966 5:+10194291 MsaT025584.1:CDS
ACTGAAGCCTCTAAAGTTAC+TGG 0.300462 5:+10196477 MsaT025584.1:CDS
AAGTCTAGGTTCACGGAAAA+AGG 0.304335 5:+10197786 MsaT025584.1:CDS
CCAGTAACCTGACCGATAAA+TGG 0.310033 5:+10195584 MsaT025584.1:CDS
GCACGGTTGTTGTTTCTTCC+AGG 0.311074 5:-10197333 None:intergenic
CAGTCAAAGCCCATTGGAAT+TGG 0.311372 5:-10196458 None:intergenic
AGAAGCATCAATCACATATT+GGG 0.318251 5:-10199396 None:intergenic
CAATTTAAAGCGATGCATTC+AGG 0.320037 5:+10197294 MsaT025584.1:CDS
GGGCAGATATGCTGCTTGTT+AGG 0.325600 5:+10194312 MsaT025584.1:CDS
TCCAACACCAGTAACTTTAG+AGG 0.330432 5:-10196484 None:intergenic
CCGTTCTGCAATATTCTGTT+TGG 0.331844 5:-10198991 None:intergenic
ACCTTCAGGTATCTAGAAAA+AGG 0.332272 5:+10195377 MsaT025584.1:CDS
TTCTCCAATGCATTCCTTGT+GGG 0.337628 5:+10196865 MsaT025584.1:CDS
TCATAACGGTCGATTAATAT+TGG 0.345212 5:+10198474 MsaT025584.1:CDS
ACATCACCAAGCTGCTCATA+TGG 0.346699 5:+10197127 MsaT025584.1:CDS
TATCGATGCTATGATTAATT+GGG 0.348586 5:-10196629 None:intergenic
TTGGATGGACAGTCATAAAA+AGG 0.349457 5:+10196719 MsaT025584.1:CDS
TTTCATTATATCATGCTTCC+AGG 0.351847 5:-10195278 None:intergenic
AGTTAATCTTGTAGCCTCAT+TGG 0.356242 5:+10197507 MsaT025584.1:CDS
CATGGAGAAAGCAACTTGTT+TGG 0.357100 5:+10196120 MsaT025584.1:CDS
ATTTATTGCATCTGCACATA+TGG 0.361235 5:-10198963 None:intergenic
ATTTGTAGGGATGGGGAGTA+AGG 0.364663 5:+10199118 MsaT025584.1:intron
TGGCTTAAGCGAGCAAGAAA+TGG 0.365023 5:+10196282 MsaT025584.1:CDS
GAACGGAGTGCGGGTCAAAT+TGG 0.366573 5:+10199008 MsaT025584.1:CDS
CTATGCATGTGCCATTTGTC+TGG 0.367534 5:+10196764 MsaT025584.1:CDS
GATAAAATATCAAGATTGTT+AGG 0.369967 5:-10197460 None:intergenic
GTCCACGGAGGTTAGCTTGC+AGG 0.371146 5:+10197063 MsaT025584.1:CDS
GAACCTAATATTGGTTGAAC+TGG 0.372778 5:-10195244 None:intergenic
GGACGGTTGCTAACCAGGTT+GGG 0.373448 5:-10197152 None:intergenic
ACAGCATTCTTCTCACTCTT+GGG 0.374747 5:+10194897 MsaT025584.1:CDS
TAGATACCTGAAGGTTTGTT+TGG 0.376177 5:-10195369 None:intergenic
CCGCATAGTCATCACCAAAA+AGG 0.376241 5:-10198402 None:intergenic
ATATGACAAAATATTTCTTT+CGG 0.377580 5:-10194262 None:intergenic
AATCGACCGTTATGATCATA+TGG 0.380385 5:-10198466 None:intergenic
ATGGAGAAAGCAACTTGTTT+GGG 0.384611 5:+10196121 MsaT025584.1:CDS
TTGTTTGCAGAGTCCGCAAT+TGG 0.386998 5:+10198327 MsaT025584.1:intron
ACCTGAAGGTTTGTTTGGTA+TGG 0.389182 5:-10195364 None:intergenic
TTGATAATAAGAATCCTTGT+AGG 0.390467 5:+10196211 MsaT025584.1:CDS
CGCTTAGGAGCTTCCCTACA+AGG 0.394648 5:-10196225 None:intergenic
TTACCAAGTGCTTGGTCATC+AGG 0.396873 5:-10196693 None:intergenic
GTAAAGGTGTCCCCTACATT+TGG 0.398805 5:-10200708 None:intergenic
TATTATTCCATTTATCGGTC+AGG 0.402386 5:-10195591 None:intergenic
TCATGTCTTCATCAAAATCA+TGG 0.402480 5:-10193657 None:intergenic
ATAATGCAAAAGCTAGTTGT+TGG 0.405733 5:+10194425 MsaT025584.1:CDS
GAAGCACAGTGGCTGTTTAG+AGG 0.414147 5:+10196741 MsaT025584.1:CDS
GCACGGCGAACTTCAAGTTT+AGG 0.415320 5:-10195400 None:intergenic
CCATGCTCTCTATGAGAACT+TGG 0.417517 5:-10199900 None:intergenic
TGATCTACTACACAAATAAC+AGG 0.418792 5:-10197853 None:intergenic
CCGTGGACCACCTGGAGTCT+TGG 0.420145 5:-10197048 None:intergenic
CAAGGATTCTTATTATCAAA+TGG 0.422726 5:-10196207 None:intergenic
TCAGCAAATGCTGAAAATTC+GGG 0.423148 5:+10195829 MsaT025584.1:CDS
CATTGGAATTGGACATCCTT+AGG 0.424645 5:-10196447 None:intergenic
TTCGGTATTACAAAACCATT+AGG 0.425530 5:-10197691 None:intergenic
GCATACAAAGATTTATTCTT+GGG 0.426169 5:+10194292 MsaT025584.1:CDS
GGAGCATATCTTACACTTGA+TGG 0.426654 5:-10196661 None:intergenic
TTCTTGTTGACAGATCGCTC+TGG 0.430442 5:+10200613 MsaT025584.1:intron
AACCAATATTAGGTTCTGAA+TGG 0.430900 5:+10195251 MsaT025584.1:CDS
CTGCAATATTCTGTTTGGAC+AGG 0.431322 5:-10198986 None:intergenic
TGCTTCAAAAGTGGAATTCA+AGG 0.432223 5:+10195432 MsaT025584.1:CDS
ATCAACACCTATAAATGAAA+TGG 0.433040 5:+10195663 MsaT025584.1:CDS
ACGGAGGCTCCGAACTGTAT+AGG 0.434304 5:+10196177 MsaT025584.1:CDS
GGAATGATGTCAACAATCTC+TGG 0.439710 5:+10195215 MsaT025584.1:CDS
GCCTCTAAAGTTACTGGTGT+TGG 0.440503 5:+10196483 MsaT025584.1:CDS
TAGCAGGACGGTTGCTAACC+AGG 0.441853 5:-10197157 None:intergenic
CTGCCCGTGATGTGAAAGTC+TGG 0.441867 5:+10194592 MsaT025584.1:CDS
TCCATACCAAACAAACCTTC+AGG 0.443642 5:+10195363 MsaT025584.1:CDS
GAGGGGTTTGTTTGTCCAAA+AGG 0.444149 5:+10197619 MsaT025584.1:CDS
TGCAAGAGTTAGAGATAGAA+AGG 0.452962 5:+10193521 MsaT025584.1:CDS
ACTACTGGAATCCCATGTTC+AGG 0.452967 5:+10196806 MsaT025584.1:CDS
TTGTGTGATGACATTAGCTT+TGG 0.453305 5:+10197817 MsaT025584.1:CDS
AAGCATGGAGAAAATTATAC+TGG 0.453852 5:+10196003 MsaT025584.1:CDS
GAGATAGAAAGGAGAGATGA+CGG 0.454304 5:+10193532 MsaT025584.1:CDS
GAGCAGATCGATTGAAGAAA+AGG 0.454991 5:+10199373 MsaT025584.1:CDS
ATTGGACATCCTTAGGAACT+TGG 0.455895 5:-10196440 None:intergenic
AGCATGCACTGTTCGACAAA+TGG 0.458019 5:-10196843 None:intergenic
TTTCAGTATGAGCTTGTGCC+TGG 0.458792 5:+10200656 MsaT025584.1:CDS
GTTCCAGTGCCATCCATTGC+TGG 0.459445 5:+10196087 MsaT025584.1:CDS
TGTAAGCATCGGGCGCTACC+TGG 0.461002 5:+10195901 MsaT025584.1:CDS
TTGGGAAGCCAATGCGTGGC+AGG 0.463624 5:+10198440 MsaT025584.1:CDS
TCCGATGTGCAAGGGCTGAC+TGG 0.464462 5:+10194204 MsaT025584.1:CDS
TCTTACACACTGTCTTCCCT+TGG 0.466467 5:-10195746 None:intergenic
TGTCGAGGTTCATCAATCAT+AGG 0.467302 5:+10199432 MsaT025584.1:CDS
AGTGTCTTTGCTGCTAGATA+AGG 0.468607 5:-10195320 None:intergenic
AATTATTGGTTTCGTAACAT+AGG 0.468753 5:-10197953 None:intergenic
CTTGCTCGCTTAAGCCAACT+TGG 0.468788 5:-10196276 None:intergenic
CGTGATGTCTCTCCTGAACA+TGG 0.470385 5:-10196818 None:intergenic
TGTTCCGGTGTTCAATATGC+TGG 0.471039 5:+10193373 MsaT025584.1:CDS
ACAGAAACAACATATATTAG+TGG 0.472686 5:+10197367 MsaT025584.1:CDS
TGGTGATGTCTGCCTAGGTC+AGG 0.473912 5:-10197113 None:intergenic
GAGTACAAATAGTGCTGAAT+CGG 0.474296 5:+10194933 MsaT025584.1:CDS
GGATGCATCTGTCGCATTGT+GGG 0.474993 5:+10193801 MsaT025584.1:CDS
CCAAAGAGGCAGAATTTCCC+TGG 0.475734 5:-10197016 None:intergenic
GGAAGCATGATATAATGAAA+TGG 0.476912 5:+10195281 MsaT025584.1:CDS
TGATGTGATTTGTAGGGATG+GGG 0.479110 5:+10199111 MsaT025584.1:intron
GTGTCTTTGCTGCTAGATAA+GGG 0.479134 5:-10195319 None:intergenic
TAAGCTTGAAAATATTAGAA+AGG 0.479612 5:+10195540 MsaT025584.1:CDS
CTGGGTGAAGAACTGACATA+TGG 0.480176 5:+10200632 MsaT025584.1:CDS
TGATGAGTCTTGTATGCAAC+AGG 0.481085 5:-10194356 None:intergenic
GGCATCAAAGTCAATTGGCC+TGG 0.481404 5:+10197315 MsaT025584.1:CDS
CTGCAGCTCGTGGGAGCAGA+AGG 0.484276 5:+10196353 MsaT025584.1:CDS
GAGCAGCAAGCTTTCTCTAC+TGG 0.486308 5:+10196969 MsaT025584.1:CDS
TGCTCATATGGGCCCCAACC+TGG 0.487835 5:+10197139 MsaT025584.1:CDS
GAAAATAATTCCAAGACTCC+AGG 0.487927 5:+10197038 MsaT025584.1:CDS
ACTTGGTGACTGACAAGATT+GGG 0.487983 5:-10199883 None:intergenic
CTACATTCTCTAAATGCTGA+TGG 0.488243 5:+10197883 MsaT025584.1:CDS
AGTAAAAGAATCCAGACAAA+TGG 0.488674 5:-10196775 None:intergenic
TTTGCTCTCAAAGTTGATAA+CGG 0.490175 5:-10194227 None:intergenic
ATGGAAGTACTTCCTTGTTC+CGG 0.493760 5:+10193358 MsaT025584.1:CDS
CCAATAATTGATCAATCCCT+TGG 0.493841 5:+10197967 MsaT025584.1:CDS
CTGAACCCAAGTGGCTAGAG+GGG 0.493917 5:+10193779 MsaT025584.1:CDS
GTGTGAATCATCCAAATGTA+GGG 0.497889 5:+10200697 MsaT025584.1:CDS
TAGCGAACTCCCCTCTTAGC+AGG 0.497935 5:-10197173 None:intergenic
TCTTGTTGACAGATCGCTCT+GGG 0.498056 5:+10200614 MsaT025584.1:intron
GGGGAAGAACAAAAGAATTA+CGG 0.498963 5:+10193628 MsaT025584.1:CDS
ATGGAGGCTTCTCGTTGTAA+TGG 0.500645 5:+10194627 MsaT025584.1:CDS
GTTCAGCAAAGACATGGTTA+TGG 0.501531 5:+10196038 MsaT025584.1:CDS
AGCGTAATGTTGTTGTGAAA+TGG 0.502626 5:+10197590 MsaT025584.1:CDS
ATTCAGGCATCAAAGTCAAT+TGG 0.504970 5:+10197310 MsaT025584.1:CDS
GGCTTAAGCGAGCAAGAAAT+GGG 0.505135 5:+10196283 MsaT025584.1:CDS
AGAGAGAATCAAATTGATGT+GGG 0.506951 5:+10196539 MsaT025584.1:CDS
ATTCTCAAAGTCTAGGTTCA+CGG 0.509139 5:+10197779 MsaT025584.1:CDS
AGGCACACAACAGGCGCAAA+AGG 0.510862 5:+10199208 MsaT025584.1:CDS
CTTCTCCAATGCATTCCTTG+TGG 0.511168 5:+10196864 MsaT025584.1:CDS
GCTAACCTCCGTGGACCACC+TGG 0.513795 5:-10197056 None:intergenic
TACCCCAAAATACTATAAAG+AGG 0.513946 5:+10195980 MsaT025584.1:CDS
GTTGTGGTTCTTCTATTACA+GGG 0.515573 5:-10196587 None:intergenic
GGCATGAGCAAGAGAGGTTG+TGG 0.515781 5:-10196603 None:intergenic
TGGAGAGGGAAGTGGCTAGC+TGG 0.517102 5:+10194179 MsaT025584.1:CDS
CCAAGTTCTCATAGAGAGCA+TGG 0.519198 5:+10199900 MsaT025584.1:CDS
TTCTGTGGTAAAGCATGACC+AGG 0.520107 5:+10196998 MsaT025584.1:CDS
ATGTGCAGGAGGCACACAAC+AGG 0.520231 5:+10199199 MsaT025584.1:CDS
AACCATCACATACATTAAGA+TGG 0.521126 5:-10194472 None:intergenic
GGGTACTAAATGTAAGCATC+GGG 0.521249 5:+10195891 MsaT025584.1:CDS
TTGTGGTTCTTCTATTACAG+GGG 0.521697 5:-10196586 None:intergenic
ACCAAGCACTTGGTAACCAT+TGG 0.522775 5:+10196700 MsaT025584.1:CDS
TAGGGATGGGGAGTAAGGGC+TGG 0.523101 5:+10199123 MsaT025584.1:intron
CAGCACTTATGTAGTGCGCC+AGG 0.523105 5:-10194867 None:intergenic
TATGAGCTTGTGCCTGGCAA+AGG 0.523487 5:+10200662 MsaT025584.1:CDS
ACATTGTCGATTCTTACTAC+CGG 0.523721 5:-10195707 None:intergenic
GACGGTTGCTAACCAGGTTG+GGG 0.523917 5:-10197151 None:intergenic
GTGTGTAAGATGGGCAAATG+AGG 0.525212 5:+10195759 MsaT025584.1:CDS
AAACATGGAGATCCTTTGCC+AGG 0.525491 5:-10200674 None:intergenic
CTTCATATTGTAACTGTCAA+GGG 0.526178 5:+10193608 MsaT025584.1:CDS
ACCACATGTTTCAGGACAGC+AGG 0.526274 5:-10198371 None:intergenic
TTAGCAACCGTCCTGCTAAG+AGG 0.526616 5:+10197162 MsaT025584.1:CDS
AGGGAAGACAGTGTGTAAGA+TGG 0.528083 5:+10195749 MsaT025584.1:CDS
AGGACGGTTGCTAACCAGGT+TGG 0.528172 5:-10197153 None:intergenic
TAGCAACCGTCCTGCTAAGA+GGG 0.528299 5:+10197163 MsaT025584.1:CDS
GGGAAGACAGTGTGTAAGAT+GGG 0.529120 5:+10195750 MsaT025584.1:CDS
AAGAGAGAATCAAATTGATG+TGG 0.529199 5:+10196538 MsaT025584.1:CDS
TGGCGGCAGCCGCTTCATTG+AGG 0.529351 5:+10197251 MsaT025584.1:CDS
CATCACCAAGCTGCTCATAT+GGG 0.530717 5:+10197128 MsaT025584.1:CDS
TTCTTACAGTGTAAAGATCC+AGG 0.532292 5:-10195919 None:intergenic
TGATAATAAGAATCCTTGTA+GGG 0.533324 5:+10196212 MsaT025584.1:CDS
ATAATCAATTCTCAAAGTCT+AGG 0.533549 5:+10197772 MsaT025584.1:CDS
TCCAATGGTTACCAAGTGCT+TGG 0.533978 5:-10196701 None:intergenic
TAAGGATGTCCAATTCCAAT+GGG 0.534554 5:+10196449 MsaT025584.1:CDS
ATTGCTCTTGTGAATGACCC+TGG 0.534674 5:+10195469 MsaT025584.1:CDS
TTTGTAGGGATGGGGAGTAA+GGG 0.535392 5:+10199119 MsaT025584.1:intron
TTGGCCGACGGTCAACTGAA+TGG 0.535481 5:+10193484 MsaT025584.1:CDS
TTTCCTGATGACCAAGCACT+TGG 0.535969 5:+10196690 MsaT025584.1:CDS
CTCGCTTAAGCCAACTTGGA+AGG 0.536557 5:-10196272 None:intergenic
TATGGGAACCTGCCACGCAT+TGG 0.538076 5:-10198448 None:intergenic
AGGCTTCAGTCAAAGCCCAT+TGG 0.538266 5:-10196464 None:intergenic
TGACCCTCTTCAGAATGCAT+TGG 0.538522 5:-10196147 None:intergenic
ATCCCTTGGTCTTGATTCAG+AGG 0.539146 5:+10197981 MsaT025584.1:CDS
CAGCTTGGTGATGTCTGCCT+AGG 0.539950 5:-10197118 None:intergenic
TCCTGATTCTTAAACAAACC+AGG 0.540237 5:-10195487 None:intergenic
GACTCCCACAAGGAATGCAT+TGG 0.540387 5:-10196869 None:intergenic
ATTTCTCATCCTCAATGAAG+CGG 0.541329 5:-10197260 None:intergenic
ATGGAATAATATTGTAGTTG+AGG 0.541800 5:+10195603 MsaT025584.1:CDS
GCGGATGCAAAAGACAGACT+TGG 0.542735 5:+10198421 MsaT025584.1:CDS
TATTTCTTTCGGTCATGAGT+TGG 0.542759 5:-10194251 None:intergenic
CAGTACAAGGAATAGCGCTT+AGG 0.542790 5:-10196240 None:intergenic
ACTAAGAAACCAAGTTCCTA+AGG 0.542995 5:+10196431 MsaT025584.1:CDS
CTCTACTGGCGAAGGTTCTG+TGG 0.543194 5:+10196983 MsaT025584.1:CDS
GCACCGGCCTTATACTGAAA+CGG 0.544656 5:+10195942 MsaT025584.1:CDS
CTTTACACTGTAAGAAGCAC+CGG 0.545383 5:+10195926 MsaT025584.1:CDS
CTGCTAGATAAGGGAGGTGA+TGG 0.545489 5:-10195310 None:intergenic
GGAGGAGAACCTATACAGTT+CGG 0.545743 5:-10196186 None:intergenic
TTGGACAAACAAACCCCTCA+TGG 0.547156 5:-10197615 None:intergenic
ATCTGTCGCATTGTGGGTCA+AGG 0.547168 5:+10193807 MsaT025584.1:CDS
TGGGTACTAAATGTAAGCAT+CGG 0.548273 5:+10195890 MsaT025584.1:CDS
ATCGATGCTATGATTAATTG+GGG 0.550024 5:-10196628 None:intergenic
AATACTATAAAGAGGAAGCA+TGG 0.550672 5:+10195988 MsaT025584.1:CDS
CATTGTCGATTCTTACTACC+GGG 0.550877 5:-10195706 None:intergenic
CTTCCAGACTTTCACATCAC+GGG 0.551447 5:-10194595 None:intergenic
AACTTGGTGACTGACAAGAT+TGG 0.551684 5:-10199884 None:intergenic
GCGAGATCCACCTTCCAAGT+TGG 0.552493 5:+10196262 MsaT025584.1:CDS
AGTAGGACTGAAGTTGGTAA+AGG 0.553785 5:+10194379 MsaT025584.1:CDS
GGGATGCATCTGTCGCATTG+TGG 0.554337 5:+10193800 MsaT025584.1:CDS
TAGGTTCTGAATGGAAAACC+TGG 0.554580 5:+10195260 MsaT025584.1:CDS
TCCAAATTTCTCTTCCAATG+AGG 0.554814 5:-10197521 None:intergenic
TTCTGAACCCAAGTGGCTAG+AGG 0.556621 5:+10193777 MsaT025584.1:CDS
GATTAACTTTGCAGCAAGCA+AGG 0.556672 5:-10197492 None:intergenic
TCATCAAGTAGGACTGAAGT+TGG 0.556801 5:+10194373 MsaT025584.1:CDS
TCTGAACCCAAGTGGCTAGA+GGG 0.556805 5:+10193778 MsaT025584.1:CDS
TAGCTGGTATCCGATGTGCA+AGG 0.556883 5:+10194195 MsaT025584.1:CDS
GTCTTGTATGCAACAGGATG+CGG 0.557195 5:-10194350 None:intergenic
TGTGTGAATCATCCAAATGT+AGG 0.558584 5:+10200696 MsaT025584.1:CDS
CAAGCTTTCTCTACTGGCGA+AGG 0.559487 5:+10196975 MsaT025584.1:CDS
AATTCAAACTGTCAATGCAA+TGG 0.560162 5:+10193583 MsaT025584.1:CDS
TGTGATGGTACAACTGTTGT+GGG 0.561536 5:+10195871 MsaT025584.1:CDS
CTAAGGATGTCCAATTCCAA+TGG 0.561771 5:+10196448 MsaT025584.1:CDS
ATGTACTGAATCACCAGCAA+TGG 0.561925 5:-10196100 None:intergenic
GAGAGTGAATCACCAAATAA+CGG 0.563819 5:+10193733 MsaT025584.1:CDS
AATATTGCAGAACGGAGTGC+GGG 0.564569 5:+10198999 MsaT025584.1:CDS
TTCTGTTACATGAGGTTGCA+CGG 0.565874 5:-10197350 None:intergenic
TCACCAGCAATGGATGGCAC+TGG 0.566070 5:-10196090 None:intergenic
GTGAATCACCAAATAACGGT+AGG 0.566621 5:+10193737 MsaT025584.1:CDS
ACCTCCCACTCATCACTCGC+AGG 0.568601 5:-10197733 None:intergenic
AAGCCAATGCATTCTGAAGA+GGG 0.569956 5:+10196144 MsaT025584.1:CDS
ATTGCTGGTGATTCAGTACA+TGG 0.570533 5:+10196102 MsaT025584.1:CDS
TGTTTGCAGAGTCCGCAATT+GGG 0.570803 5:+10198328 MsaT025584.1:intron
AGATAGAAAGGAGAGATGAC+GGG 0.572559 5:+10193533 MsaT025584.1:CDS
CGCACTACATAAGTGCTGAC+TGG 0.572965 5:+10194872 MsaT025584.1:CDS
CGGATGCAAAAGACAGACTT+GGG 0.573097 5:+10198422 MsaT025584.1:CDS
GGTGTAATATCTGCGGAGCC+CGG 0.573616 5:+10195688 MsaT025584.1:CDS
CTGATCCTGCGAGTGATGAG+TGG 0.573824 5:+10197728 MsaT025584.1:CDS
AAGGTGGATCTCGCAGTACA+AGG 0.574840 5:-10196253 None:intergenic
AGCTGGTATCCGATGTGCAA+GGG 0.575034 5:+10194196 MsaT025584.1:CDS
ACACCTATAAATGAAATGGC+TGG 0.575078 5:+10195667 MsaT025584.1:CDS
CCAAGACTCCAGGTGGTCCA+CGG 0.575396 5:+10197048 MsaT025584.1:CDS
ACAGCAGGATGAATATGAGC+AGG 0.577645 5:-10198356 None:intergenic
CTAGCAGCAAAGACACTCCT+CGG 0.578961 5:+10195326 MsaT025584.1:CDS
GATTGTGAGCGTTCACACAT+TGG 0.580106 5:+10199922 MsaT025584.1:CDS
TAACGGTCGATTAATATTGG+AGG 0.580191 5:+10198477 MsaT025584.1:CDS
GCTTCATATTGTAACTGTCA+AGG 0.581405 5:+10193607 MsaT025584.1:CDS
TGTTGAAGCTCCACTGCAAG+TGG 0.581708 5:+10196065 MsaT025584.1:CDS
AGATACACATGCTTCAAAAG+TGG 0.582294 5:+10195423 MsaT025584.1:CDS
ATATCAAGATTGTTAGGACG+AGG 0.584517 5:-10197454 None:intergenic
TTTGAAGGGCTGCAGCTCGT+GGG 0.584873 5:+10196344 MsaT025584.1:CDS
CTCTGAGAATTCTCTCTCTG+TGG 0.585281 5:+10193699 MsaT025584.1:CDS
ATCAACACCAGATACGGCAC+AGG 0.585897 5:+10199305 MsaT025584.1:intron
TCACCAAATAACGGTAGGGA+AGG 0.588486 5:+10193742 MsaT025584.1:CDS
GTGTGATGGTACAACTGTTG+TGG 0.591190 5:+10195870 MsaT025584.1:CDS
CTGGAAGGCATTTGCCATGG+AGG 0.592580 5:+10194611 MsaT025584.1:CDS
ACATTTGTGTGTGAGTACAT+AGG 0.595978 5:+10199165 MsaT025584.1:CDS
TTGGATGATTCACACAAACA+TGG 0.596128 5:-10200689 None:intergenic
GCATATTGAACACCGGAACA+AGG 0.596693 5:-10193370 None:intergenic
ATCGACCGTTATGATCATAT+GGG 0.597060 5:-10198465 None:intergenic
TTGAAGCATGTGTATCTGCA+CGG 0.597382 5:-10195417 None:intergenic
GAATGATGTCAACAATCTCT+GGG 0.597469 5:+10195216 MsaT025584.1:CDS
GATCCGTTTCAGTATAAGGC+CGG 0.597712 5:-10195945 None:intergenic
TGTGGTTCTTCTATTACAGG+GGG 0.599699 5:-10196585 None:intergenic
TGAATCACCAAATAACGGTA+GGG 0.599835 5:+10193738 MsaT025584.1:CDS
GCTTAAGCCAACTTGGAAGG+TGG 0.601173 5:-10196269 None:intergenic
GAAGCCAATGCATTCTGAAG+AGG 0.602363 5:+10196143 MsaT025584.1:CDS
GGCACTGGAACCACTTGCAG+TGG 0.603249 5:-10196075 None:intergenic
TTGTGAAATGGCACCATGAG+GGG 0.604232 5:+10197602 MsaT025584.1:CDS
AGCACTTGGTAACCATTGGA+TGG 0.606301 5:+10196704 MsaT025584.1:CDS
AGGTGTTGAGGATCTAGTAA+AGG 0.608647 5:-10200724 None:intergenic
GAATATTGCAGAACGGAGTG+CGG 0.609035 5:+10198998 MsaT025584.1:CDS
TGTGTAAGATGGGCAAATGA+GGG 0.609699 5:+10195760 MsaT025584.1:CDS
ATTGAGCACATTAGAAGCTG+AGG 0.612305 5:+10195513 MsaT025584.1:CDS
CCTTCCAGACTTTCACATCA+CGG 0.613081 5:-10194596 None:intergenic
TTTGATTTACTACCTGACCT+AGG 0.614373 5:+10197101 MsaT025584.1:CDS
TGGGGCCCATATGAGCAGCT+TGG 0.615723 5:-10197133 None:intergenic
AGTCTGGAAGGCATTTGCCA+TGG 0.616237 5:+10194608 MsaT025584.1:CDS
AATGTCATCACACAATACTA+CGG 0.619281 5:-10197809 None:intergenic
CCATTAGGAAGAGATGCTAA+AGG 0.619569 5:-10197676 None:intergenic
TGAAGAGGGTCATGTTGCAA+CGG 0.619706 5:+10196158 MsaT025584.1:CDS
ATTACAACGAGAAGCCTCCA+TGG 0.620843 5:-10194625 None:intergenic
CAAGAATAAATCTTTGTATG+CGG 0.622028 5:-10194290 None:intergenic
TGATCCATTCAGTTGACCGT+CGG 0.628461 5:-10193488 None:intergenic
GGATTCTTATTATCAAATGG+AGG 0.629640 5:-10196204 None:intergenic
TGTGTGTGAGTACATAGGAG+AGG 0.631159 5:+10199170 MsaT025584.1:CDS
GAGCAGGCACATCCCAATTG+CGG 0.632029 5:-10198340 None:intergenic
AGGTTCCCATATGATCATAA+CGG 0.632375 5:+10198460 MsaT025584.1:CDS
TATGTTGTTTCTGTTACATG+AGG 0.632768 5:-10197358 None:intergenic
TGATGACATTAGCTTTGGAA+AGG 0.634479 5:+10197822 MsaT025584.1:CDS
GTTGTGAAATGGCACCATGA+GGG 0.634553 5:+10197601 MsaT025584.1:CDS
TTCATATTGTAACTGTCAAG+GGG 0.635692 5:+10193609 MsaT025584.1:CDS
AGAGGGTCATGTTGCAACGG+AGG 0.635754 5:+10196161 MsaT025584.1:CDS
ACTGAATCACCAGCAATGGA+TGG 0.635769 5:-10196096 None:intergenic
GCTTCAAAAGTGGAATTCAA+GGG 0.635795 5:+10195433 MsaT025584.1:CDS
GCATACAAGACTCATCAAGT+AGG 0.637217 5:+10194362 MsaT025584.1:CDS
GAACATGTTCAGCAAAGACA+TGG 0.638539 5:+10196032 MsaT025584.1:CDS
TACCTCTGAATCAAGACCAA+GGG 0.640223 5:-10197983 None:intergenic
GCCAGTCAGCCCTTGCACAT+CGG 0.640908 5:-10194205 None:intergenic
TGATCCTGCGAGTGATGAGT+GGG 0.647140 5:+10197729 MsaT025584.1:CDS
TGAATCGGTAGAACTTCTGA+AGG 0.649485 5:+10194948 MsaT025584.1:CDS
AGACTTGGGAAGCCAATGCG+TGG 0.650750 5:+10198436 MsaT025584.1:CDS
ATCGGTAGAACTTCTGAAGG+AGG 0.650767 5:+10194951 MsaT025584.1:CDS
GAGAGAATCAAATTGATGTG+GGG 0.652802 5:+10196540 MsaT025584.1:CDS
GTGATGTCTCTCCTGAACAT+GGG 0.653754 5:-10196817 None:intergenic
AGCAACCGTCCTGCTAAGAG+GGG 0.654143 5:+10197164 MsaT025584.1:CDS
TGAACCCAAGTGGCTAGAGG+GGG 0.654372 5:+10193780 MsaT025584.1:CDS
TTCTCCAGCATATTGAACAC+CGG 0.655344 5:-10193377 None:intergenic
CTTCCAAAATGACTCCCACA+AGG 0.656545 5:-10196879 None:intergenic
GAACTCCCCTCTTAGCAGGA+CGG 0.660253 5:-10197169 None:intergenic
TCCTGCTGTCCTGAAACATG+TGG 0.661771 5:+10198370 MsaT025584.1:CDS
CCTGATTCTTAAACAAACCA+GGG 0.670206 5:-10195486 None:intergenic
GAAGAACAAAAGAATTACGG+TGG 0.671652 5:+10193631 MsaT025584.1:CDS
GAACAAGCTAAATTGGCCGA+CGG 0.671658 5:+10193472 MsaT025584.1:CDS
GTGGGGATTCAATGACGACA+TGG 0.672183 5:+10196557 MsaT025584.1:CDS
ACATAGGAGAAGCTATCCCA+AGG 0.672990 5:-10197937 None:intergenic
TGTGAATCATCCAAATGTAG+GGG 0.673314 5:+10200698 MsaT025584.1:CDS
CTACCTCTGAATCAAGACCA+AGG 0.675078 5:-10197984 None:intergenic
ACAGTTGTACCATCACACAT+TGG 0.675343 5:-10195865 None:intergenic
CCAAACAGAATATTGCAGAA+CGG 0.677454 5:+10198991 MsaT025584.1:CDS
AACCTGCAAGCTAACCTCCG+TGG 0.683170 5:-10197065 None:intergenic
ATTGATACTCCAATGTGTGA+TGG 0.683693 5:+10195856 MsaT025584.1:CDS
GGATCAAGAGAAATCTGCCG+AGG 0.686673 5:-10195343 None:intergenic
TCAACACCAGATACGGCACA+GGG 0.690025 5:+10199306 MsaT025584.1:intron
TTGGTCATCAGGAAATTCTG+TGG 0.690829 5:-10196682 None:intergenic
CCGTGATGTGAAAGTCTGGA+AGG 0.691630 5:+10194596 MsaT025584.1:CDS
TAAAGGACTTAACAGCTGCA+CGG 0.697471 5:+10194396 MsaT025584.1:CDS
TCCTGCGAGTGATGAGTGGG+AGG 0.698968 5:+10197732 MsaT025584.1:CDS
CACAGAGAGAGAATTCTCAG+AGG 0.701070 5:-10193698 None:intergenic
AATAATTCCAAGACTCCAGG+TGG 0.704797 5:+10197041 MsaT025584.1:CDS
GCTGTTCCAGAACCGCGTTG+AGG 0.708885 5:-10193409 None:intergenic
TATGGTTACATTCATAGACA+AGG 0.721145 5:-10198945 None:intergenic
TGTTGTGAAATGGCACCATG+AGG 0.729074 5:+10197600 MsaT025584.1:CDS
TCGATGCTATGATTAATTGG+GGG 0.734880 5:-10196627 None:intergenic
TCTTTGCTGCTAGATAAGGG+AGG 0.736930 5:-10195316 None:intergenic
TCTGTGGTAAAGCATGACCA+GGG 0.738525 5:+10196999 MsaT025584.1:CDS
GCTGGCGAAGCTATTCTGCG+CGG 0.742904 5:+10199141 MsaT025584.1:CDS
AATGGCTGGTGTAATATCTG+CGG 0.755921 5:+10195681 MsaT025584.1:CDS
AGACTCCAGGTGGTCCACGG+AGG 0.759432 5:+10197051 MsaT025584.1:CDS
GAATCTGATTGTCCTCAACG+CGG 0.767752 5:+10193397 MsaT025584.1:CDS
AGGACTTAACAGCTGCACGG+CGG 0.777367 5:+10194399 MsaT025584.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 10193358 10200733 10193358 ID=MsaG025584
Chr5 mRNA 10193358 10200733 10193358 ID=MsaT025584.1;Parent=MsaG025584
Chr5 exon 10193358 10193828 10193358 ID=MsaT025584.1.exon1;Parent=MsaT025584.1
Chr5 CDS 10193358 10193828 10193358 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10194179 10194481 10194179 ID=MsaT025584.1.exon2;Parent=MsaT025584.1
Chr5 CDS 10194179 10194481 10194179 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10194579 10194689 10194579 ID=MsaT025584.1.exon3;Parent=MsaT025584.1
Chr5 CDS 10194579 10194689 10194579 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10194862 10194972 10194862 ID=MsaT025584.1.exon4;Parent=MsaT025584.1
Chr5 CDS 10194862 10194972 10194862 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10195193 10197187 10195193 ID=MsaT025584.1.exon5;Parent=MsaT025584.1
Chr5 CDS 10195193 10197187 10195193 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10197223 10198002 10197223 ID=MsaT025584.1.exon6;Parent=MsaT025584.1
Chr5 CDS 10197223 10198002 10197223 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10198337 10198498 10198337 ID=MsaT025584.1.exon7;Parent=MsaT025584.1
Chr5 CDS 10198337 10198498 10198337 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10198937 10199053 10198937 ID=MsaT025584.1.exon8;Parent=MsaT025584.1
Chr5 CDS 10198937 10199053 10198937 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10199126 10199229 10199126 ID=MsaT025584.1.exon9;Parent=MsaT025584.1
Chr5 CDS 10199126 10199229 10199126 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10199316 10199453 10199316 ID=MsaT025584.1.exon10;Parent=MsaT025584.1
Chr5 CDS 10199316 10199453 10199316 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10199876 10199963 10199876 ID=MsaT025584.1.exon11;Parent=MsaT025584.1
Chr5 CDS 10199876 10199963 10199876 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Chr5 exon 10200626 10200733 10200626 ID=MsaT025584.1.exon12;Parent=MsaT025584.1
Chr5 CDS 10200626 10200733 10200626 ID=cds.MsaT025584.1;Parent=MsaT025584.1
Gene Sequence

>MsaT025584.1

ATGGAAGTACTTCCTTGTTCCGGTGTTCAATATGCTGGAGAATCTGATTGTCCTCAACGCGGTTCTGGAACAGCTTTTGTCTATCAGGAAGAACCTAATTGCCCTGAAAATGTTGAACAAGCTAAATTGGCCGACGGTCAACTGAATGGATCATTGCATAACATGCAAGAGTTAGAGATAGAAAGGAGAGATGACGGGTCACAGAATGTTTCTGATTTGTTGACTAATTCAAACTGTCAATGCAATGGAGCTTCATATTGTAACTGTCAAGGGGAAGAACAAAAGAATTACGGTGGTTTCCATGATTTTGATGAAGACATGATAAATGAACGTTACTTAACCTCTGAGAATTCTCTCTCTGTGGTTGATACAATTGAGAGTGAATCACCAAATAACGGTAGGGAAGGAGACTTGTCTTTTTCTGAACCCAAGTGGCTAGAGGGGGATGCATCTGTCGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCTAGCTGGTATCCGATGTGCAAGGGCTGACTGGCCGTTATCAACTTTGAGAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTCATATTTTTTCCGCATACAAAGATTTATTCTTGGGCAGATATGCTGCTTGTTAGGTCAATCGATGAGTATCCGCATCCTGTTGCATACAAGACTCATCAAGTAGGACTGAAGTTGGTAAAGGACTTAACAGCTGCACGGCGGTTTATAATGCAAAAGCTAGTTGTTGGCATGCTGAACATCGTTGATCAGTTCCATCTTAATGCTTTGACAGAAACTGCCCGTGATGTGAAAGTCTGGAAGGCATTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAGGATACACAATAGCATCCTGGCGCACTACATAAGTGCTGACTGGTTACAGCATTCTTCTCACTCTTGGGTTGAACGATGTCAGAGTACAAATAGTGCTGAATCGGTAGAACTTCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCAACAATCTCTGGGATTCACCAGTTCAACCAATATTAGGTTCTGAATGGAAAACCTGGAAGCATGATATAATGAAATGGTTCGCGCCATCACCTCCCTTATCTAGCAGCAAAGACACTCCTCGGCAGATTTCTCTTGATCCATACCAAACAAACCTTCAGGTATCTAGAAAAAGGCCTAAACTTGAAGTTCGCCGTGCAGATACACATGCTTCAAAAGTGGAATTCAAGGGTGCAGATCATGCTATTGCTCTTGTGAATGACCCTGGTTTGTTTAAGAATCAGGAGACATTGAGCACATTAGAAGCTGAGGCTTGTAAGCTTGAAAATATTAGAAAGGTATCTATCACAAATGATCTGTCCAGTAACCTGACCGATAAATGGAATAATATTGTAGTTGAGGCTGCTGATTCTGGTTTCATGCATACTAGAGAAAATGAATCAACACCTATAAATGAAATGGCTGGTGTAATATCTGCGGAGCCCGGTAGTAAGAATCGACAATGTATAGCTTTTATTGAAGCCAAGGGAAGACAGTGTGTAAGATGGGCAAATGAGGGAGATGTATACTGTTGTGTGCATTTATCTTCTCGTTTTTTGGCTGGCTCAGCAAATGCTGAAAATTCGGGTCAAATTGATACTCCAATGTGTGATGGTACAACTGTTGTGGGTACTAAATGTAAGCATCGGGCGCTACCTGGATCTTTACACTGTAAGAAGCACCGGCCTTATACTGAAACGGATCAGATCTCAAGTTTACCCCAAAATACTATAAAGAGGAAGCATGGAGAAAATTATACTGGTTCAGAGAACATGTTCAGCAAAGACATGGTTATGGTAAATGTTGAAGCTCCACTGCAAGTGGTTCCAGTGCCATCCATTGCTGGTGATTCAGTACATGGAGAAAGCAACTTGTTTGGGAAGCCAATGCATTCTGAAGAGGGTCATGTTGCAACGGAGGCTCCGAACTGTATAGGTTCTCCTCCATTTGATAATAAGAATCCTTGTAGGGAAGCTCCTAAGCGCTATTCCTTGTACTGCGAGATCCACCTTCCAAGTTGGCTTAAGCGAGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTACTCAGAACTTTTGAAGGGCTGCAGCTCGTGGGAGCAGAAGGTACATCTGCATGAAGCATGTGAGCTTTTTTATAGGCTATTCAAAAGCATTTTATCACTAAGAAACCAAGTTCCTAAGGATGTCCAATTCCAATGGGCTTTGACTGAAGCCTCTAAAGTTACTGGTGTTGGAGAATTTTTTACAAAGTTGATTCTTAGTGAAAAAGAGAGAATCAAATTGATGTGGGGATTCAATGACGACATGGATGTACCCCCTGTAATAGAAGAACCACAACCTCTCTTGCTCATGCCACCCCCAATTAATCATAGCATCGATAATGAAAATGCCATCAAGTGTAAGATATGCTCCACAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCTTTTACTAACAAGAAACTACTGGAATCCCATGTTCAGGAGAGACATCACGTGCCATTTGTCGAACAGTGCATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAGTTCTGAACAATTATGGCAGCATGTTTTATCAGCTCATCACGCTGATTTTAAGCCATCAAAAGCTCATGAGCAGCAAGCTTTCTCTACTGGCGAAGGTTCTGTGGTAAAGCATGACCAGGGAAATTCTGCCTCTTTGGAAAATAATTCCAAGACTCCAGGTGGTCCACGGAGGTTAGCTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGCAGACATCACCAAGCTGCTCATATGGGCCCCAACCTGGTTAGCAACCGTCCTGCTAAGAGGGGAACTGAGCCGCCTAAATTTAAAAAAGGTTTGGCGGCAGCCGCTTCATTGAGGATGAGAAATAAAGCTAATGCCAATTTAAAGCGATGCATTCAGGCATCAAAGTCAATTGGCCTGGAAGAAACAACAACCGTGCAACCTCATGTAACAGAAACAACATATATTAGTGGATTGTCAGAAAATCAATGCTCAGCTGTTGCCAAAATTTTGTTTTCAGAAATTCAGAAAACTAAGCCTCGTCCTAACAATCTTGATATTTTATCAGTTGCTCGCCTTGCTTGCTGCAAAGTTAATCTTGTAGCCTCATTGGAAGAGAAATTTGGAGTTCTGTCTGAAAAGCTCTATTTAAAGGCAGCAAAACTTTGCAGTGAGCGTAATGTTGTTGTGAAATGGCACCATGAGGGGTTTGTTTGTCCAAAAGGTTGTAACTTGTTAAAGGATCAAGTCTTGCACTCTCCTTTAGCATCTCTTCCTAATGGTTTTGTAATACCGAAGTGTGTAAATTTTTCTGATCCTGCGAGTGATGAGTGGGAGGTCGATGAGTTTCACTGCATAATCAATTCTCAAAGTCTAGGTTCACGGAAAAAGGCCGTAGTATTGTGTGATGACATTAGCTTTGGAAAGGAATCAGTTCCTGTTATTTGTGTAGTAGATCAAGAACTTCTACATTCTCTAAATGCTGATGGATCTAATGAACAAGATATTATCTTTTCTAAACCTTGGGATAGCTTCTCCTATGTTACGAAACCAATAATTGATCAATCCCTTGGTCTTGATTCAGAGAGTCCGCAATTGGGATGTGCCTGCTCATATTCATCCTGCTGTCCTGAAACATGTGGTCATGTATACCTTTTTGGTGATGACTATGCGGATGCAAAAGACAGACTTGGGAAGCCAATGCGTGGCAGGTTCCCATATGATCATAACGGTCGATTAATATTGGAGGAAGGTTACCTTGTCTATGAATGTAACCATATGTGCAGATGCAATAAATCCTGTCCAAACAGAATATTGCAGAACGGAGTGCGGGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGGAGTAAGGGCTGGCGAAGCTATTCTGCGCGGAACATTTGTGTGTGAGTACATAGGAGAGGTTTTAGATGTGCAGGAGGCACACAACAGGCGCAAAAGATACGGCACAGGGAATTGCAGTTATTTCTATGACATCAATGCTCGTGTTAATGATATGAGCAGATCGATTGAAGAAAAGGCCCAATATGTGATTGATGCTTCTAAAAATGGAAATGTGTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTCAGTCACCAAGTTCTCATAGAGAGCATGGATTGTGAGCGTTCACACATTGGTTTTTATGCAAGTCGAGACATCGCTCTGGGTGAAGAACTGACATATGGATTTCAGTATGAGCTTGTGCCTGGCAAAGGATCTCCATGTTTGTGTGAATCATCCAAATGTAGGGGACACCTTTACTAG

Protein sequence

>MsaT025584.1

MEVLPCSGVQYAGESDCPQRGSGTAFVYQEEPNCPENVEQAKLADGQLNGSLHNMQELEIERRDDGSQNVSDLLTNSNCQCNGASYCNCQGEEQKNYGGFHDFDEDMINERYLTSENSLSVVDTIESESPNNGREGDLSFSEPKWLEGDASVALWVKWRGKWLAGIRCARADWPLSTLRAKPTHDRKKYFVIFFPHTKIYSWADMLLVRSIDEYPHPVAYKTHQVGLKLVKDLTAARRFIMQKLVVGMLNIVDQFHLNALTETARDVKVWKAFAMEASRCNGYSDFGRMLLRIHNSILAHYISADWLQHSSHSWVERCQSTNSAESVELLKEELFDSILWNDVNNLWDSPVQPILGSEWKTWKHDIMKWFAPSPPLSSSKDTPRQISLDPYQTNLQVSRKRPKLEVRRADTHASKVEFKGADHAIALVNDPGLFKNQETLSTLEAEACKLENIRKVSITNDLSSNLTDKWNNIVVEAADSGFMHTRENESTPINEMAGVISAEPGSKNRQCIAFIEAKGRQCVRWANEGDVYCCVHLSSRFLAGSANAENSGQIDTPMCDGTTVVGTKCKHRALPGSLHCKKHRPYTETDQISSLPQNTIKRKHGENYTGSENMFSKDMVMVNVEAPLQVVPVPSIAGDSVHGESNLFGKPMHSEEGHVATEAPNCIGSPPFDNKNPCREAPKRYSLYCEIHLPSWLKRARNGKSRIVSKEVYSELLKGCSSWEQKVHLHEACELFYRLFKSILSLRNQVPKDVQFQWALTEASKVTGVGEFFTKLILSEKERIKLMWGFNDDMDVPPVIEEPQPLLLMPPPINHSIDNENAIKCKICSTEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLESHVQERHHVPFVEQCMLLQCIPCGSHFGSSEQLWQHVLSAHHADFKPSKAHEQQAFSTGEGSVVKHDQGNSASLENNSKTPGGPRRLACRFCGLKFDLLPDLGRHHQAAHMGPNLVSNRPAKRGTEPPKFKKGLAAAASLRMRNKANANLKRCIQASKSIGLEETTTVQPHVTETTYISGLSENQCSAVAKILFSEIQKTKPRPNNLDILSVARLACCKVNLVASLEEKFGVLSEKLYLKAAKLCSERNVVVKWHHEGFVCPKGCNLLKDQVLHSPLASLPNGFVIPKCVNFSDPASDEWEVDEFHCIINSQSLGSRKKAVVLCDDISFGKESVPVICVVDQELLHSLNADGSNEQDIIFSKPWDSFSYVTKPIIDQSLGLDSESPQLGCACSYSSCCPETCGHVYLFGDDYADAKDRLGKPMRGRFPYDHNGRLILEEGYLVYECNHMCRCNKSCPNRILQNGVRVKLEVFKTEKKGWGVRAGEAILRGTFVCEYIGEVLDVQEAHNRRKRYGTGNCSYFYDINARVNDMSRSIEEKAQYVIDASKNGNVSRFINHSCSPNLVSHQVLIESMDCERSHIGFYASRDIALGEELTYGFQYELVPGKGSPCLCESSKCRGHLY*