AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG025595

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025595 MtrunA17_Chr5g0403351 97.351 302 8 0 1 302 1 302 0.0 602
MsaG025595 MtrunA17_Chr5g0403331 67.657 303 97 1 1 302 1 303 1.29e-143 428
MsaG025595 MtrunA17_Chr5g0403321 64.262 305 106 2 1 302 1 305 1.53e-127 387
MsaG025595 MtrunA17_Chr4g0076161 56.066 305 124 2 1 302 1 298 3.54e-111 344
MsaG025595 MtrunA17_Chr5g0403371 75.949 237 11 1 483 673 185 421 1.32e-108 341
MsaG025595 MtrunA17_Chr6g0463611 55.556 306 123 4 1 303 15 310 5.09e-108 330
MsaG025595 MtrunA17_Chr6g0463791 57.049 305 118 4 1 302 1 295 6.33e-107 333
MsaG025595 MtrunA17_Chr3g0101761 48.097 289 147 2 13 301 14 299 1.69e-92 296
MsaG025595 MtrunA17_Chr3g0101751 46.801 297 153 3 5 301 15 306 4.95e-92 295
MsaG025595 MtrunA17_Chr3g0101821 47.959 294 146 4 10 301 11 299 7.55e-91 291
MsaG025595 MtrunA17_Chr3g0101811 46.980 298 153 3 8 304 10 303 3.57e-90 290
MsaG025595 MtrunA17_Chr3g0101661 51.667 300 135 5 5 302 12 303 4.48e-90 290
MsaG025595 MtrunA17_Chr3g0101721 48.797 291 144 3 13 301 14 301 1.03e-88 286
MsaG025595 MtrunA17_Chr3g0101691 49.673 306 144 5 1 301 3 303 1.14e-88 286
MsaG025595 MtrunA17_Chr3g0101711 51.000 300 137 5 8 302 9 303 3.09e-88 285
MsaG025595 MtrunA17_Chr5g0445451 48.039 306 146 4 1 301 1 298 3.38e-88 285
MsaG025595 MtrunA17_Chr1g0162801 48.658 298 142 6 6 301 13 301 6.24e-88 284
MsaG025595 MtrunA17_Chr8g0357421 47.039 304 153 4 1 301 1 299 3.74e-87 282
MsaG025595 MtrunA17_Chr3g0101651 53.091 275 123 4 30 302 34 304 6.08e-87 281
MsaG025595 MtrunA17_Chr3g0101801 46.128 297 155 3 5 301 15 306 6.55e-87 281
MsaG025595 MtrunA17_Chr3g0101631 48.485 297 140 6 6 301 10 294 1.09e-86 280
MsaG025595 MtrunA17_Chr1g0167321 50.166 301 139 6 3 301 7 298 1.61e-86 280
MsaG025595 MtrunA17_Chr3g0101581 47.458 295 146 4 9 301 13 300 2.96e-86 280
MsaG025595 MtrunA17_Chr3g0101671 45.973 298 157 3 5 301 9 303 4.51e-86 279
MsaG025595 MtrunA17_Chr8g0357431 49.828 291 140 3 13 301 14 300 4.67e-86 279
MsaG025595 MtrunA17_Chr3g0101731 47.797 295 145 5 10 301 11 299 5.55e-86 279
MsaG025595 MtrunA17_Chr3g0101611 48.185 303 149 3 1 299 1 299 6.51e-86 279
MsaG025595 MtrunA17_Chr8g0361471 45.638 298 157 4 5 301 6 299 1.05e-85 278
MsaG025595 MtrunA17_Chr6g0465511 45.638 298 157 4 5 301 6 299 1.12e-85 278
MsaG025595 MtrunA17_Chr5g0445441 48.039 306 146 4 1 301 42 339 1.16e-85 279
MsaG025595 MtrunA17_Chr5g0445751 47.134 314 143 7 5 305 6 309 5.17e-85 270
MsaG025595 MtrunA17_Chr6g0466331 45.302 298 158 4 5 301 6 299 1.70e-84 275
MsaG025595 MtrunA17_Chr1g0162811 47.635 296 146 5 8 301 11 299 1.13e-83 273
MsaG025595 MtrunA17_Chr5g0445461 45.425 306 154 4 1 301 1 298 2.36e-83 272
MsaG025595 MtrunA17_Chr3g0101701 52.174 276 124 4 29 301 33 303 2.43e-83 272
MsaG025595 MtrunA17_Chr5g0431641 46.309 298 149 5 6 301 10 298 7.41e-83 270
MsaG025595 MtrunA17_Chr3g0101571 47.751 289 145 2 13 301 15 297 3.14e-82 269
MsaG025595 MtrunA17_Chr3g0101621 46.844 301 147 4 1 301 1 288 2.81e-81 266
MsaG025595 MtrunA17_Chr3g0101601 47.811 297 142 5 6 301 10 294 4.02e-81 266
MsaG025595 MtrunA17_Chr5g0445531 48.529 272 132 2 30 301 34 297 3.95e-80 263
MsaG025595 MtrunA17_Chr3g0101831 44.781 297 160 2 5 301 8 300 8.02e-80 263
MsaG025595 MtrunA17_Chr5g0445381 47.712 306 147 5 1 301 32 329 1.69e-79 263
MsaG025595 MtrunA17_Chr4g0020041 44.951 307 156 7 1 301 1 300 4.22e-79 261
MsaG025595 MtrunA17_Chr2g0280261 48.582 282 134 4 21 301 21 292 3.37e-78 258
MsaG025595 MtrunA17_Chr5g0403361 64.486 214 18 3 303 458 291 504 5.70e-78 262
MsaG025595 MtrunA17_Chr5g0403361 51.724 116 50 1 374 483 519 634 1.11e-24 109
MsaG025595 MtrunA17_Chr5g0431671 46.468 269 136 2 34 301 38 299 2.18e-77 256
MsaG025595 MtrunA17_Chr4g0024771 43.000 300 161 4 3 301 8 298 7.86e-76 252
MsaG025595 MtrunA17_Chr5g0446161 44.147 299 154 4 5 301 12 299 1.01e-75 251
MsaG025595 MtrunA17_Chr5g0445421 46.102 295 129 5 8 301 86 351 2.83e-74 249
MsaG025595 MtrunA17_Chr5g0446151 44.286 280 142 3 25 301 32 300 9.04e-74 246
MsaG025595 MtrunA17_Chr6g0463801 45.161 279 144 3 23 301 26 295 1.86e-72 243
MsaG025595 MtrunA17_Chr3g0101741 46.957 230 118 1 72 301 1 226 1.30e-69 233
MsaG025595 MtrunA17_Chr3g0116681 40.717 307 163 6 1 301 8 301 9.64e-69 233
MsaG025595 MtrunA17_Chr4g0058231 35.974 303 177 6 6 301 7 299 2.10e-55 197
MsaG025595 MtrunA17_Chr4g0047631 36.667 300 177 6 5 301 21 310 2.37e-54 194
MsaG025595 MtrunA17_Chr3g0116741 35.644 303 170 7 5 301 30 313 9.65e-54 192
MsaG025595 MtrunA17_Chr4g0047661 34.967 306 180 7 5 301 20 315 1.09e-53 192
MsaG025595 MtrunA17_Chr4g0047691 35.548 301 183 5 5 301 20 313 6.81e-53 190
MsaG025595 MtrunA17_Chr1g0174421 34.211 304 182 8 10 303 20 315 3.95e-52 183
MsaG025595 MtrunA17_Chr2g0310391 34.014 294 177 7 14 301 9 291 1.28e-51 186
MsaG025595 MtrunA17_Chr4g0058281 35.880 301 178 8 8 301 19 311 4.19e-51 185
MsaG025595 MtrunA17_Chr2g0310381 35.135 296 173 7 12 301 9 291 5.45e-51 184
MsaG025595 MtrunA17_Chr8g0373711 45.714 245 70 6 485 673 180 417 1.21e-50 186
MsaG025595 MtrunA17_Chr6g0484811 32.558 301 187 6 7 301 12 302 1.41e-50 184
MsaG025595 MtrunA17_Chr4g0058261 35.689 283 169 6 25 301 54 329 2.28e-50 184
MsaG025595 MtrunA17_Chr1g0156101 36.842 285 160 5 32 301 30 309 2.76e-50 183
MsaG025595 MtrunA17_Chr5g0445411 51.852 162 76 2 3 164 15 174 8.53e-50 171
MsaG025595 MtrunA17_Chr1g0156081 35.274 292 169 5 25 301 47 333 1.17e-49 182
MsaG025595 MtrunA17_Chr4g0047641 35.505 307 178 8 5 301 18 314 1.31e-49 181
MsaG025595 MtrunA17_Chr4g0035921 36.306 314 171 9 8 301 7 311 1.32e-49 181
MsaG025595 MtrunA17_Chr4g0058191 34.551 301 173 7 6 301 7 288 5.50e-49 179
MsaG025595 MtrunA17_Chr4g0076181 40.517 232 69 3 72 303 1 163 5.68e-49 169
MsaG025595 MtrunA17_Chr1g0174461 31.776 321 200 8 3 313 2 313 2.03e-48 177
MsaG025595 MtrunA17_Chr4g0011861 35.484 279 165 4 32 303 27 297 3.69e-48 171
MsaG025595 MtrunA17_Chr4g0058201 35.106 282 169 5 24 301 19 290 8.81e-48 176
MsaG025595 MtrunA17_Chr8g0344151 33.212 274 166 4 34 299 36 300 9.03e-48 176
MsaG025595 MtrunA17_Chr8g0382901 33.667 300 181 6 6 301 467 752 1.58e-47 181
MsaG025595 MtrunA17_Chr8g0382901 32.542 295 169 7 10 301 6 273 3.06e-41 161
MsaG025595 MtrunA17_Chr1g0174451 33.333 315 186 9 1 301 1 305 2.26e-47 175
MsaG025595 MtrunA17_Chr4g0011921 36.039 308 176 7 1 301 1 294 2.32e-47 174
MsaG025595 MtrunA17_Chr7g0218601 34.459 296 177 5 12 301 16 300 2.62e-47 174
MsaG025595 MtrunA17_Chr7g0235551 35.354 297 176 9 12 299 10 299 3.51e-47 174
MsaG025595 MtrunA17_Chr5g0430111 31.579 304 182 6 5 301 17 301 3.64e-47 172
MsaG025595 MtrunA17_Chr6g0472311 35.599 309 178 8 5 301 15 314 4.07e-47 174
MsaG025595 MtrunA17_Chr1g0174471 33.775 302 186 6 10 301 23 320 4.38e-47 174
MsaG025595 MtrunA17_Chr3g0084921 34.680 297 176 10 14 301 19 306 4.53e-47 174
MsaG025595 MtrunA17_Chr5g0419691 34.768 302 180 5 9 301 1 294 5.52e-47 173
MsaG025595 MtrunA17_Chr6g0484841 34.932 292 167 8 20 301 23 301 1.21e-46 172
MsaG025595 MtrunA17_Chr4g0011871 34.983 303 179 5 9 301 1 295 1.33e-46 172
MsaG025595 MtrunA17_Chr5g0430031 31.803 305 187 7 5 301 10 301 1.79e-46 172
MsaG025595 MtrunA17_Chr1g0174441 31.692 325 198 9 3 313 21 335 2.62e-46 172
MsaG025595 MtrunA17_Chr8g0390881 31.894 301 190 5 7 300 9 301 6.44e-46 171
MsaG025595 MtrunA17_Chr5g0430091 32.797 311 189 6 1 301 1 301 7.67e-46 171
MsaG025595 MtrunA17_Chr8g0372251 34.028 288 168 8 25 301 27 303 1.20e-45 170
MsaG025595 MtrunA17_Chr5g0405001 31.475 305 181 9 8 301 24 311 3.36e-45 169
MsaG025595 MtrunA17_Chr5g0430101 32.237 304 185 6 5 301 9 298 3.64e-45 168
MsaG025595 MtrunA17_Chr8g0344181 32.117 274 169 4 34 299 38 302 2.02e-44 166
MsaG025595 MtrunA17_Chr4g0011981 35.211 284 170 4 24 301 19 294 1.18e-43 164
MsaG025595 MtrunA17_Chr4g0011931 32.997 297 185 4 13 303 8 296 1.40e-43 158
MsaG025595 MtrunA17_Chr7g0218611 34.276 283 173 4 25 301 24 299 1.88e-43 163
MsaG025595 MtrunA17_Chr7g0258221 33.555 301 184 5 13 301 7 303 2.00e-43 164
MsaG025595 MtrunA17_Chr5g0431511 34.182 275 167 5 34 301 33 300 2.51e-43 163
MsaG025595 MtrunA17_Chr4g0011881 33.333 285 174 5 24 301 19 294 3.04e-43 163
MsaG025595 MtrunA17_Chr5g0430081 32.248 307 180 7 9 301 7 299 4.07e-43 162
MsaG025595 MtrunA17_Chr5g0430131 30.868 311 194 6 1 301 1 300 4.99e-43 162
MsaG025595 MtrunA17_Chr1g0174481 31.229 301 190 6 7 301 10 299 5.68e-43 162
MsaG025595 MtrunA17_Chr4g0011901 35.401 274 161 5 35 301 30 294 2.06e-41 157
MsaG025595 MtrunA17_Chr5g0431501 33.453 278 165 6 34 301 33 300 2.29e-40 155
MsaG025595 MtrunA17_Chr5g0431461 33.453 278 165 6 34 301 33 300 2.29e-40 155
MsaG025595 MtrunA17_Chr4g0011961 33.101 287 177 4 21 301 16 293 3.18e-40 154
MsaG025595 MtrunA17_Chr4g0030701 32.971 276 172 5 35 301 36 307 5.90e-40 154
MsaG025595 MtrunA17_Chr3g0094231 32.000 275 167 8 34 301 36 297 1.03e-39 153
MsaG025595 MtrunA17_Chr5g0406651 33.333 288 177 5 21 301 16 295 1.41e-39 152
MsaG025595 MtrunA17_Chr1g0156061 32.246 276 130 4 26 301 47 265 3.02e-39 151
MsaG025595 MtrunA17_Chr8g0344191 29.333 300 192 5 8 299 46 333 3.49e-39 152
MsaG025595 MtrunA17_Chr5g0430171 36.957 230 137 3 1 225 1 227 4.99e-39 144
MsaG025595 MtrunA17_Chr4g0061381 31.496 254 148 5 43 284 40 279 8.21e-39 150
MsaG025595 MtrunA17_Chr8g0362701 31.373 255 163 5 55 301 53 303 1.39e-38 150
MsaG025595 MtrunA17_Chr5g0431631 48.921 139 70 1 8 146 24 161 1.80e-38 140
MsaG025595 MtrunA17_Chr3g0086691 31.102 254 151 7 43 284 41 282 9.68e-38 147
MsaG025595 MtrunA17_Chr4g0057001 29.167 288 189 4 20 301 36 314 1.30e-37 147
MsaG025595 MtrunA17_Chr7g0254641 33.206 262 154 7 32 280 35 288 3.08e-37 146
MsaG025595 MtrunA17_Chr5g0401681 32.313 294 169 8 5 285 6 282 4.93e-37 145
MsaG025595 MtrunA17_Chr3g0094171 29.766 299 193 5 10 301 16 304 2.06e-36 143
MsaG025595 MtrunA17_Chr4g0030711 32.319 263 167 5 49 301 49 310 3.70e-36 143
MsaG025595 MtrunA17_Chr1g0160851 30.345 290 183 6 5 284 1 281 5.70e-36 142
MsaG025595 MtrunA17_Chr8g0362481 32.917 240 145 7 72 301 1 234 1.90e-35 139
MsaG025595 MtrunA17_Chr7g0224561 30.657 274 175 8 34 301 31 295 6.57e-35 139
MsaG025595 MtrunA17_Chr7g0224551 30.657 274 175 8 34 301 31 295 6.76e-35 139
MsaG025595 MtrunA17_Chr3g0117321 49.600 125 60 1 31 155 4 125 8.13e-35 128
MsaG025595 MtrunA17_Chr3g0086661 30.037 273 164 7 43 301 41 300 8.45e-35 139
MsaG025595 MtrunA17_Chr3g0086651 29.808 312 190 9 5 301 3 300 1.13e-34 138
MsaG025595 MtrunA17_Chr2g0310371 43.262 141 76 2 14 154 9 145 2.73e-34 127
MsaG025595 MtrunA17_Chr1g0207851 31.597 288 177 8 49 320 50 333 2.84e-34 134
MsaG025595 MtrunA17_Chr1g0207841 31.439 264 169 4 49 301 50 312 9.16e-34 136
MsaG025595 MtrunA17_Chr7g0246221 28.990 307 198 8 1 297 1 297 1.77e-33 134
MsaG025595 MtrunA17_Chr5g0401691 31.154 260 164 5 1 252 21 273 7.83e-33 133
MsaG025595 MtrunA17_Chr1g0205361 30.249 281 178 6 13 284 10 281 8.94e-33 132
MsaG025595 MtrunA17_Chr7g0258211 28.758 306 198 6 3 299 6 300 1.11e-32 132
MsaG025595 MtrunA17_Chr4g0039901 31.660 259 162 5 33 285 34 283 1.97e-32 131
MsaG025595 MtrunA17_Chr4g0056951 28.800 250 167 3 58 301 65 309 5.07e-32 130
MsaG025595 MtrunA17_Chr8g0355961 29.693 293 180 9 3 282 7 286 8.20e-32 130
MsaG025595 MtrunA17_Chr1g0205371 29.963 267 172 5 24 284 25 282 8.29e-32 129
MsaG025595 MtrunA17_Chr4g0052881 31.864 295 165 9 6 285 10 283 1.74e-31 129
MsaG025595 MtrunA17_Chr4g0046691 29.197 274 178 6 35 303 40 302 2.69e-31 124
MsaG025595 MtrunA17_Chr1g0200961 28.947 304 188 8 5 301 13 295 3.69e-31 127
MsaG025595 MtrunA17_Chr4g0052861 27.891 294 177 7 6 285 10 282 8.31e-31 127
MsaG025595 MtrunA17_Chr2g0314721 28.058 278 179 5 16 284 26 291 8.82e-31 126
MsaG025595 MtrunA17_Chr5g0445341 63.855 83 29 1 72 153 1 83 1.39e-30 115
MsaG025595 MtrunA17_Chr4g0030741 28.862 246 166 5 58 301 85 323 1.83e-30 123
MsaG025595 MtrunA17_Chr2g0304871 29.667 300 189 7 15 299 18 310 2.00e-30 125
MsaG025595 MtrunA17_Chr6g0451751 28.105 306 195 8 14 301 23 321 2.04e-30 126
MsaG025595 MtrunA17_Chr5g0431601 62.651 83 30 1 72 154 1 82 2.75e-30 114
MsaG025595 MtrunA17_Chr4g0046671 28.819 288 182 5 30 303 40 318 6.15e-30 120
MsaG025595 MtrunA17_Chr4g0046631 30.634 284 171 8 32 300 43 315 7.02e-30 124
MsaG025595 MtrunA17_Chr4g0052851 28.244 262 169 7 28 285 27 273 7.52e-30 124
MsaG025595 MtrunA17_Chr6g0451691 27.129 317 204 7 5 301 16 325 8.26e-30 124
MsaG025595 MtrunA17_Chr3g0105751 29.739 306 193 8 12 304 27 323 8.43e-30 122
MsaG025595 MtrunA17_Chr8g0356001 29.966 297 174 11 3 282 7 286 1.51e-29 123
MsaG025595 MtrunA17_Chr4g0017411 30.943 265 158 9 28 285 24 270 1.80e-29 122
MsaG025595 MtrunA17_Chr7g0265611 28.289 304 191 9 10 301 26 314 1.84e-29 123
MsaG025595 MtrunA17_Chr7g0255531 26.623 308 194 7 12 302 3 295 2.95e-29 122
MsaG025595 MtrunA17_Chr8g0351801 28.731 268 177 6 44 301 44 307 3.68e-29 122
MsaG025595 MtrunA17_Chr1g0176831 26.596 282 192 5 9 284 38 310 3.82e-29 122
MsaG025595 MtrunA17_Chr2g0314731 28.522 291 183 7 7 284 2 280 4.02e-29 121
MsaG025595 MtrunA17_Chr5g0395321 29.655 290 187 7 5 289 10 287 4.67e-29 122
MsaG025595 MtrunA17_Chr3g0107561 28.846 312 190 9 7 299 18 316 1.04e-28 117
MsaG025595 MtrunA17_Chr7g0246131 29.310 290 185 9 1 280 1 280 1.44e-28 120
MsaG025595 MtrunA17_Chr5g0402971 26.855 283 186 6 35 303 41 316 2.17e-28 116
MsaG025595 MtrunA17_Chr4g0053621 29.392 296 176 6 7 284 4 284 2.54e-28 119
MsaG025595 MtrunA17_Chr5g0395331 31.698 265 163 8 29 284 32 287 2.63e-28 119
MsaG025595 MtrunA17_Chr6g0466941 25.795 283 188 7 24 288 23 301 3.59e-27 116
MsaG025595 MtrunA17_Chr5g0445541 51.456 103 44 2 6 108 15 111 5.99e-27 106
MsaG025595 MtrunA17_Chr6g0484771 35.507 138 86 2 72 207 1 137 1.40e-26 105
MsaG025595 MtrunA17_Chr4g0008101 27.070 314 201 8 11 301 13 321 2.95e-26 113
MsaG025595 MtrunA17_Chr6g0466901 26.280 293 190 7 13 288 17 300 3.45e-26 113
MsaG025595 MtrunA17_Chr6g0451781 27.857 280 177 7 41 301 81 354 5.75e-26 112
MsaG025595 MtrunA17_Chr6g0451741 27.027 296 188 7 7 282 37 324 6.67e-26 112
MsaG025595 MtrunA17_Chr5g0395381 28.472 288 168 7 5 289 10 262 6.75e-26 111
MsaG025595 MtrunA17_Chr4g0046321 28.832 274 178 9 35 301 35 298 3.32e-25 110
MsaG025595 MtrunA17_Chr6g0451801 26.646 319 205 8 5 303 14 323 1.06e-24 105
MsaG025595 MtrunA17_Chr5g0403381 41.860 129 72 2 545 673 334 459 1.57e-24 108
MsaG025595 MtrunA17_Chr4g0046331 28.339 307 203 9 1 301 3 298 1.78e-24 107
MsaG025595 MtrunA17_Chr6g0451681 36.420 162 94 3 3 164 38 190 7.31e-24 105
MsaG025595 MtrunA17_Chr8g0339311 25.468 267 176 7 29 280 39 297 7.43e-24 106
MsaG025595 MtrunA17_Chr2g0296651 27.372 274 171 6 26 285 23 282 9.37e-24 105
MsaG025595 MtrunA17_Chr8g0370651 26.837 313 194 8 13 301 19 320 1.09e-23 105
MsaG025595 MtrunA17_Chr3g0107611 25.321 312 206 8 7 299 23 326 1.21e-23 105
MsaG025595 MtrunA17_Chr5g0418011 46.774 124 59 2 550 672 13 130 1.57e-23 102
MsaG025595 MtrunA17_Chr8g0370641 27.184 309 194 7 13 301 19 316 1.63e-23 105
MsaG025595 MtrunA17_Chr4g0046351 28.832 274 178 9 35 301 35 298 2.59e-23 104
MsaG025595 MtrunA17_Chr5g0432751 25.091 275 191 6 25 289 24 293 3.29e-23 103
MsaG025595 MtrunA17_Chr4g0039391 27.823 248 159 7 49 284 47 286 1.03e-22 102
MsaG025595 MtrunA17_Chr3g0082701 26.415 318 204 7 5 301 14 322 1.17e-22 102
MsaG025595 MtrunA17_Chr7g0246181 27.835 291 192 6 1 282 1 282 1.51e-22 101
MsaG025595 MtrunA17_Chr3g0107541 28.881 277 167 10 43 301 59 323 1.71e-22 102
MsaG025595 MtrunA17_Chr5g0430051 44.144 111 57 2 5 115 11 116 1.95e-22 92.8
MsaG025595 MtrunA17_Chr6g0451641 27.304 293 179 10 10 280 13 293 2.48e-22 101
MsaG025595 MtrunA17_Chr1g0164211 26.996 263 177 5 24 280 21 274 4.24e-22 100
MsaG025595 MtrunA17_Chr7g0246121 27.935 247 154 8 45 280 45 278 5.03e-22 100
MsaG025595 MtrunA17_Chr1g0197891 27.106 273 174 6 25 287 25 282 6.75e-22 99.8
MsaG025595 MtrunA17_Chr1g0197881 27.306 271 172 6 27 287 26 281 8.45e-22 99.4
MsaG025595 MtrunA17_Chr1g0197851 26.937 271 173 6 24 284 24 279 9.76e-22 99.4
MsaG025595 MtrunA17_Chr1g0154511 42.975 121 61 3 555 673 332 446 1.32e-21 99.8
MsaG025595 MtrunA17_Chr3g0101641 54.762 84 38 0 181 264 1 84 1.35e-21 89.7
MsaG025595 MtrunA17_Chr2g0296661 27.823 248 153 6 55 285 49 287 1.86e-21 98.6
MsaG025595 MtrunA17_Chr1g0197871 26.568 271 174 6 24 284 24 279 2.84e-21 97.8
MsaG025595 MtrunA17_Chr7g0246151 25.670 261 172 6 45 297 45 291 3.80e-21 97.4
MsaG025595 MtrunA17_Chr4g0074581 28.235 255 173 6 9 256 42 293 1.11e-20 96.3
MsaG025595 MtrunA17_Chr8g0339331 26.715 277 182 6 20 282 24 293 1.59e-20 95.5
MsaG025595 MtrunA17_Chr5g0439334 42.975 121 66 2 554 672 342 461 4.48e-20 94.7
MsaG025595 MtrunA17_Chr3g0119351 41.803 122 64 4 554 673 367 483 5.36e-20 94.7
MsaG025595 MtrunA17_Chr1g0210091 25.591 254 170 6 58 301 87 331 8.24e-20 93.6
MsaG025595 MtrunA17_Chr1g0213671 27.667 300 186 11 20 301 18 304 1.53e-19 92.8
MsaG025595 MtrunA17_Chr5g0419451 27.241 290 183 10 22 302 48 318 1.54e-19 92.4
MsaG025595 MtrunA17_Chr1g0200951 25.172 290 191 9 24 302 50 324 2.21e-19 92.0
MsaG025595 MtrunA17_Chr6g0458561 27.609 297 183 9 7 282 21 306 1.61e-18 89.4
MsaG025595 MtrunA17_Chr5g0431591 35.772 123 70 2 181 301 1 116 8.30e-18 85.1
MsaG025595 MtrunA17_Chr8g0377341 26.241 282 168 13 37 302 70 327 1.27e-17 86.7
MsaG025595 MtrunA17_Chr2g0314771 27.500 160 110 2 72 225 1 160 3.92e-17 79.3
MsaG025595 MtrunA17_Chr1g0198191 27.232 224 149 4 8 222 20 238 7.09e-17 84.3
MsaG025595 MtrunA17_Chr2g0280071 25.203 246 178 4 34 274 63 307 2.95e-16 82.8
MsaG025595 MtrunA17_Chr8g0364651 27.148 291 189 10 1 283 1 276 3.53e-16 82.0
MsaG025595 MtrunA17_Chr3g0116721 29.878 164 105 4 144 301 2 161 9.80e-16 76.3
MsaG025595 MtrunA17_Chr5g0413911 29.167 168 114 2 32 194 40 207 3.77e-15 79.0
MsaG025595 MtrunA17_Chr5g0445641 45.570 79 43 0 137 215 21 99 5.77e-15 71.6
MsaG025595 MtrunA17_Chr2g0280051 23.904 251 181 5 34 276 73 321 1.41e-14 75.5
MsaG025595 MtrunA17_Chr7g0225871 34.375 128 72 5 556 672 44 170 3.31e-14 75.1
MsaG025595 MtrunA17_Chr5g0413071 36.923 130 70 4 552 673 293 418 3.53e-14 75.9
MsaG025595 MtrunA17_Chr3g0119241 35.099 151 81 5 532 673 285 427 5.91e-14 75.5
MsaG025595 MtrunA17_Chr1g0176861 37.113 97 55 2 1 94 1 94 6.24e-14 68.2
MsaG025595 MtrunA17_Chr8g0364631 24.000 250 176 5 34 276 32 274 5.73e-13 72.0
MsaG025595 MtrunA17_Chr6g0451761 24.082 245 158 9 41 280 48 269 7.13e-13 69.7
MsaG025595 MtrunA17_Chr5g0446111 59.091 44 18 0 61 104 1 44 9.69e-13 63.2
MsaG025595 MtrunA17_Chr2g0280001 28.261 138 98 1 34 170 63 200 1.19e-12 67.8
MsaG025595 MtrunA17_Chr4g0060531 38.806 134 54 5 561 672 75 202 2.71e-12 69.3
MsaG025595 MtrunA17_Chr8g0340721 33.846 130 74 4 552 673 341 466 4.90e-12 69.3
MsaG025595 MtrunA17_Chr2g0280081 24.904 261 190 4 21 276 518 777 4.94e-12 69.7
MsaG025595 MtrunA17_Chr4g0042361 36.154 130 65 6 555 672 527 650 6.50e-12 68.9
MsaG025595 MtrunA17_Chr1g0149711 35.772 123 61 5 563 673 84 200 1.83e-11 66.6
MsaG025595 MtrunA17_Chr5g0406841 37.895 95 47 3 585 672 178 267 2.20e-11 66.6
MsaG025595 MtrunA17_Chr8g0372341 25.000 124 93 0 41 164 51 174 2.28e-11 63.9
MsaG025595 MtrunA17_Chr2g0288121 36.508 126 62 5 561 673 35 155 2.48e-11 65.9
MsaG025595 MtrunA17_Chr4g0034931 37.209 129 64 6 556 672 128 251 3.74e-11 65.9
MsaG025595 MtrunA17_Chr4g0064511 37.600 125 58 5 561 672 209 326 4.53e-11 65.9
MsaG025595 MtrunA17_Chr5g0415451 33.088 136 73 5 553 673 412 544 6.78e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG025595 AT5G24950.1 34.432 273 162 4 34 301 32 292 5.15e-52 187
MsaG025595 AT3G48310.1 34.409 279 168 3 23 301 23 286 9.10e-52 187
MsaG025595 AT3G48320.1 32.226 301 189 3 1 301 1 286 7.75e-51 184
MsaG025595 AT4G13310.2 34.420 276 162 4 34 302 32 295 8.41e-51 182
MsaG025595 AT3G26310.1 33.333 303 180 7 8 301 5 294 4.52e-50 182
MsaG025595 AT5G25120.1 33.225 307 179 8 5 302 3 292 5.20e-50 182
MsaG025595 AT3G48280.1 34.146 287 175 3 14 300 12 284 8.85e-50 181
MsaG025595 AT4G13310.1 34.420 276 162 4 34 302 32 295 9.00e-50 181
MsaG025595 AT1G11610.1 33.700 273 163 4 34 301 33 292 1.40e-48 178
MsaG025595 AT1G11610.2 33.700 273 163 4 34 301 33 292 2.04e-48 178
MsaG025595 AT5G25140.1 32.343 303 182 8 7 301 4 291 5.45e-48 176
MsaG025595 AT3G48290.2 33.221 298 182 4 20 315 21 303 5.98e-48 177
MsaG025595 AT3G48270.1 34.211 266 162 3 36 301 33 285 6.23e-48 176
MsaG025595 AT4G13290.1 34.058 276 155 5 34 302 33 288 1.45e-47 175
MsaG025595 AT3G26300.1 34.386 285 166 6 26 301 23 295 1.79e-47 175
MsaG025595 AT5G25130.1 35.019 257 155 5 5 255 3 253 1.91e-47 175
MsaG025595 AT5G24960.2 33.688 282 170 4 25 301 24 293 1.96e-47 172
MsaG025595 AT1G13110.1 33.974 312 183 7 1 301 1 300 2.52e-47 175
MsaG025595 AT3G48290.1 31.987 297 184 4 20 316 21 299 3.71e-47 174
MsaG025595 AT3G26320.1 35.395 291 166 7 21 301 17 295 8.80e-47 173
MsaG025595 AT5G24960.1 33.688 282 170 4 25 301 24 293 9.11e-47 173
MsaG025595 AT2G30770.1 32.601 273 166 4 34 301 33 292 9.47e-47 173
MsaG025595 AT3G48300.1 30.395 329 192 5 36 343 31 343 4.58e-46 171
MsaG025595 AT3G48300.2 30.395 329 192 5 36 343 33 345 4.76e-46 171
MsaG025595 AT5G57260.1 34.859 284 165 6 27 301 23 295 1.23e-45 170
MsaG025595 AT5G66631.1 58.333 144 50 2 329 462 361 504 2.05e-45 172
MsaG025595 AT5G66631.1 38.525 122 63 2 374 483 515 636 3.40e-12 70.1
MsaG025595 AT5G25180.1 31.353 303 185 8 7 301 4 291 3.80e-45 169
MsaG025595 AT3G26280.1 35.548 301 169 9 11 301 14 299 6.87e-45 168
MsaG025595 AT3G26280.2 35.548 301 169 9 11 301 31 316 7.31e-45 168
MsaG025595 AT5G06900.1 34.420 276 162 5 34 301 34 298 1.04e-44 167
MsaG025595 AT3G26330.1 35.145 276 158 6 35 301 32 295 1.08e-44 167
MsaG025595 AT2G30750.1 32.746 284 173 4 23 301 22 292 3.91e-44 166
MsaG025595 AT4G31500.1 32.313 294 183 5 14 301 10 293 7.00e-44 165
MsaG025595 AT5G42590.1 34.286 280 168 4 28 302 26 294 1.26e-43 164
MsaG025595 AT1G13090.1 33.448 290 164 7 28 303 22 296 1.72e-43 159
MsaG025595 AT1G13080.1 32.923 325 188 9 1 313 1 307 8.34e-43 162
MsaG025595 AT3G26290.1 35.018 277 155 7 36 301 33 295 1.34e-42 161
MsaG025595 AT3G26290.2 35.018 277 155 7 36 301 46 308 1.87e-42 161
MsaG025595 AT5G07990.1 32.800 250 156 5 24 266 23 267 2.15e-42 161
MsaG025595 AT3G26190.1 33.333 288 172 8 24 301 18 295 3.28e-42 160
MsaG025595 AT2G24180.1 36.879 282 158 8 29 301 31 301 4.82e-42 160
MsaG025595 AT3G44250.1 34.164 281 166 7 30 301 24 294 5.70e-42 159
MsaG025595 AT4G36220.1 34.182 275 159 7 41 301 47 313 9.37e-42 159
MsaG025595 AT1G13090.2 33.333 288 163 7 28 301 22 294 1.47e-41 158
MsaG025595 AT4G20240.2 33.096 281 169 5 33 308 32 298 1.69e-41 156
MsaG025595 AT3G26200.1 33.684 285 171 6 26 301 20 295 2.39e-41 158
MsaG025595 AT4G20240.1 34.630 257 151 4 33 284 32 276 3.12e-41 156
MsaG025595 AT3G53280.1 33.692 279 169 6 30 301 24 293 4.42e-41 157
MsaG025595 AT5G04330.1 34.286 280 168 6 31 301 29 301 3.20e-40 155
MsaG025595 AT3G26170.1 31.511 311 184 9 5 301 3 298 4.01e-40 154
MsaG025595 AT3G26270.1 33.333 300 173 10 26 313 24 308 5.47e-40 154
MsaG025595 AT3G26220.1 32.595 316 180 11 1 301 1 298 1.19e-39 153
MsaG025595 AT4G13770.1 30.000 300 193 6 9 301 5 294 1.11e-38 150
MsaG025595 AT3G26210.1 32.463 268 162 5 43 301 40 297 6.35e-38 148
MsaG025595 AT3G53300.1 33.453 278 167 6 33 301 27 295 1.11e-37 147
MsaG025595 AT3G26180.1 30.033 303 186 8 13 301 8 298 1.29e-37 147
MsaG025595 AT2G02580.1 32.776 299 179 7 13 301 9 295 1.46e-37 147
MsaG025595 AT3G26160.1 30.225 311 185 9 5 301 6 298 3.08e-37 146
MsaG025595 AT3G26150.1 30.464 302 185 7 13 301 9 298 6.97e-37 145
MsaG025595 AT4G12300.1 31.047 277 172 7 34 301 42 308 5.10e-35 140
MsaG025595 AT4G12320.1 30.000 300 189 7 13 301 21 310 5.18e-35 140
MsaG025595 AT3G26230.1 31.757 296 186 8 15 301 7 295 2.77e-34 137
MsaG025595 AT5G06905.1 27.922 308 203 7 12 313 10 304 7.33e-34 136
MsaG025595 AT5G44620.1 31.379 290 180 6 20 301 34 312 1.28e-33 135
MsaG025595 AT2G42250.1 30.667 300 191 6 8 301 16 304 5.27e-33 134
MsaG025595 AT1G01280.1 30.952 252 149 6 43 280 41 281 8.80e-33 133
MsaG025595 AT3G26830.1 31.290 310 188 7 1 301 1 294 1.23e-32 132
MsaG025595 AT1G13100.1 31.136 273 159 8 43 301 37 294 2.03e-32 132
MsaG025595 AT5G67310.1 30.534 262 168 8 12 263 19 276 1.22e-30 127
MsaG025595 AT4G22710.1 30.522 249 156 5 43 283 62 301 8.44e-30 124
MsaG025595 AT4G12330.1 27.778 306 196 8 8 301 19 311 2.33e-29 123
MsaG025595 AT4G20235.1 28.627 255 154 5 5 255 4 234 3.78e-29 119
MsaG025595 AT4G12310.1 29.104 268 173 6 43 301 53 312 5.68e-29 122
MsaG025595 AT4G22690.1 30.120 249 157 5 43 283 93 332 6.02e-29 122
MsaG025595 AT2G40890.1 25.995 377 237 8 5 357 1 359 2.26e-28 120
MsaG025595 AT3G52970.1 30.515 272 172 6 27 289 29 292 7.88e-28 118
MsaG025595 AT1G50520.1 29.200 250 161 4 60 301 67 308 9.24e-28 118
MsaG025595 AT4G31940.1 27.946 297 189 7 12 288 9 300 7.20e-27 115
MsaG025595 AT4G37320.1 26.316 285 183 8 12 285 12 280 7.60e-27 115
MsaG025595 AT5G10600.1 28.897 263 158 9 1 252 27 271 8.71e-27 115
MsaG025595 AT4G37430.1 28.929 280 168 9 5 266 2 268 1.35e-26 114
MsaG025595 AT4G37310.1 29.918 244 150 6 34 261 30 268 1.37e-26 114
MsaG025595 AT4G37340.1 29.044 272 175 7 1 261 1 265 1.94e-26 114
MsaG025595 AT3G52970.2 28.421 285 175 5 27 289 29 306 2.65e-26 114
MsaG025595 AT4G15360.1 27.759 299 201 8 7 299 14 303 3.43e-26 113
MsaG025595 AT3G20110.1 29.373 303 198 5 5 301 10 302 4.10e-26 113
MsaG025595 AT3G20090.2 29.719 249 160 6 58 299 65 305 1.24e-25 112
MsaG025595 AT4G31970.1 27.703 296 190 6 12 288 9 299 1.38e-25 111
MsaG025595 AT5G36220.1 28.125 320 192 13 2 303 3 302 1.62e-25 111
MsaG025595 AT3G20140.1 27.636 275 181 6 34 301 42 305 2.23e-25 110
MsaG025595 AT3G20940.1 28.014 282 188 7 26 301 34 306 2.78e-25 110
MsaG025595 AT3G25180.2 25.000 284 201 5 4 279 9 288 3.44e-25 108
MsaG025595 AT4G37410.1 28.966 290 176 11 8 284 4 276 5.57e-25 109
MsaG025595 AT3G25180.1 25.000 284 201 5 4 279 9 288 2.05e-24 108
MsaG025595 AT2G45560.2 25.177 282 193 7 8 280 15 287 2.46e-24 104
MsaG025595 AT5G10610.1 30.126 239 150 6 27 252 21 255 4.71e-24 107
MsaG025595 AT2G45560.3 30.864 162 105 3 8 168 15 170 4.99e-24 102
MsaG025595 AT5G57220.1 27.344 256 169 7 7 252 5 253 6.48e-24 106
MsaG025595 AT3G20950.1 27.097 310 204 9 4 301 10 309 1.01e-23 105
MsaG025595 AT3G53290.1 31.739 230 140 8 90 309 11 233 1.03e-23 104
MsaG025595 AT4G37330.1 28.276 290 171 10 5 283 12 275 1.15e-23 105
MsaG025595 AT2G45550.1 26.022 269 181 7 22 280 26 286 1.42e-23 105
MsaG025595 AT5G35715.1 29.167 240 153 8 72 301 1 233 1.49e-23 104
MsaG025595 AT2G45560.1 24.823 282 194 7 8 280 15 287 1.87e-23 105
MsaG025595 AT3G32047.1 24.701 251 174 3 57 301 63 304 2.36e-23 104
MsaG025595 AT2G23220.1 26.493 268 175 7 29 285 39 295 4.73e-23 103
MsaG025595 AT3G61040.2 28.767 292 178 10 32 313 31 302 5.03e-23 102
MsaG025595 AT2G14100.1 26.562 256 164 4 57 301 64 306 5.52e-23 103
MsaG025595 AT3G20130.1 26.908 249 166 6 58 299 64 303 1.35e-22 102
MsaG025595 AT3G61040.1 28.767 292 178 10 32 313 31 302 1.50e-22 102
MsaG025595 AT4G37400.1 27.311 238 149 7 58 285 52 275 2.01e-22 102
MsaG025595 AT1G50560.1 26.877 253 168 4 58 301 65 309 2.05e-22 102
MsaG025595 AT2G22330.1 26.480 321 190 11 13 301 26 332 5.35e-22 100
MsaG025595 AT4G37370.1 27.551 294 189 9 1 285 1 279 6.05e-22 100
MsaG025595 AT3G53305.1 38.686 137 81 2 72 206 1 136 6.26e-22 98.2
MsaG025595 AT4G15330.1 23.779 307 217 6 1 301 6 301 6.99e-22 100
MsaG025595 AT2G22330.2 26.480 321 190 11 13 301 49 355 7.42e-22 100
MsaG025595 AT5G47990.1 26.800 250 170 4 58 301 64 306 1.27e-21 99.4
MsaG025595 AT2G23190.1 25.000 296 195 9 1 285 45 324 1.52e-21 99.4
MsaG025595 AT4G37360.1 29.278 263 168 9 1 252 1 256 4.06e-21 97.8
MsaG025595 AT1G33720.1 26.000 300 198 9 7 292 9 298 4.59e-21 97.8
MsaG025595 AT3G20960.2 26.939 245 164 5 62 299 67 303 4.59e-21 97.8
MsaG025595 AT2G25160.2 27.119 295 181 11 6 282 11 289 4.86e-21 97.1
MsaG025595 AT2G05180.1 26.613 248 169 4 58 299 63 303 5.91e-21 96.7
MsaG025595 AT2G45570.1 26.894 264 176 8 43 297 47 302 7.21e-21 97.1
MsaG025595 AT5G42580.1 23.482 247 171 3 57 301 60 290 9.75e-21 96.7
MsaG025595 AT2G25160.1 27.119 295 181 11 6 282 11 289 1.05e-20 96.7
MsaG025595 AT2G33580.1 38.068 176 84 6 503 672 314 470 3.39e-20 95.9
MsaG025595 AT3G20100.1 23.904 251 176 4 58 301 63 305 3.45e-20 95.1
MsaG025595 AT3G28740.1 28.030 264 164 8 34 285 39 288 5.81e-20 94.4
MsaG025595 AT3G20120.4 27.016 248 167 5 58 299 63 302 9.54e-20 93.6
MsaG025595 AT1G13710.1 29.236 301 172 15 16 302 40 313 1.09e-19 93.6
MsaG025595 AT1G28430.1 25.436 287 181 8 58 334 62 325 1.22e-19 93.2
MsaG025595 AT5G09970.1 25.090 279 180 10 36 302 71 332 1.45e-19 93.2
MsaG025595 AT4G39950.1 25.952 289 179 11 34 301 56 330 1.59e-19 93.2
MsaG025595 AT4G39950.2 25.952 289 179 11 34 301 96 370 2.67e-19 92.4
MsaG025595 AT2G27000.1 23.460 422 271 13 58 459 61 450 3.25e-19 92.0
MsaG025595 AT4G31950.1 25.926 297 183 8 12 288 9 288 4.06e-19 91.7
MsaG025595 AT1G74110.1 25.962 312 202 11 7 302 36 334 5.16e-19 91.7
MsaG025595 AT1G74550.1 32.418 182 111 4 32 207 25 200 5.58e-19 91.3
MsaG025595 AT5G04630.1 31.098 164 110 2 7 168 11 173 7.06e-19 90.9
MsaG025595 AT1G11600.1 26.792 265 185 6 12 270 11 272 1.05e-18 90.5
MsaG025595 AT4G15350.1 26.000 250 172 4 58 301 57 299 1.07e-18 90.5
MsaG025595 AT1G74540.1 31.551 187 111 5 32 207 25 205 1.83e-18 89.7
MsaG025595 AT3G20080.2 24.176 273 190 5 34 299 42 304 2.59e-18 89.4
MsaG025595 AT3G20080.1 24.176 273 190 5 34 299 42 304 2.59e-18 89.4
MsaG025595 AT2G45580.1 25.940 266 183 5 44 301 48 307 2.71e-18 89.0
MsaG025595 AT2G45580.3 25.940 266 183 5 44 301 48 307 3.65e-18 87.8
MsaG025595 AT3G10560.1 32.317 164 108 2 7 168 19 181 4.32e-18 88.6
MsaG025595 AT5G05260.2 26.441 295 182 9 13 280 14 300 1.65e-17 86.7
MsaG025595 AT5G05260.1 26.148 283 176 7 13 270 14 288 2.06e-17 86.3
MsaG025595 AT1G16410.2 24.662 296 200 9 21 299 32 321 8.61e-17 84.0
MsaG025595 AT4G15380.1 22.314 242 178 3 62 301 68 301 1.86e-16 83.2
MsaG025595 AT1G16410.1 24.662 296 200 9 21 299 32 321 2.01e-16 83.2
MsaG025595 AT1G58260.1 21.905 315 214 8 6 299 9 312 2.42e-16 83.2
MsaG025595 AT3G26180.2 38.532 109 63 2 13 120 8 113 4.87e-16 80.9
MsaG025595 AT1G79370.1 23.607 305 200 9 9 283 13 314 2.23e-15 80.1
MsaG025595 AT5G35917.1 24.658 292 187 8 34 301 42 324 4.71e-15 79.0
MsaG025595 AT1G16400.1 25.316 316 205 11 5 299 15 320 5.45e-15 79.0
MsaG025595 AT2G30490.1 27.222 180 121 3 58 227 55 234 1.00e-14 77.8
MsaG025595 AT2G23770.1 43.333 90 43 3 583 672 371 452 5.83e-14 75.9
MsaG025595 AT3G21630.1 35.606 132 69 4 550 673 304 427 1.23e-13 74.7
MsaG025595 AT2G12190.1 24.521 261 183 6 34 283 32 289 2.83e-13 73.2
MsaG025595 AT3G61880.1 24.315 292 190 10 22 302 54 325 6.43e-13 72.4
MsaG025595 AT4G20140.1 39.370 127 63 4 561 673 944 1070 6.79e-13 72.8
MsaG025595 AT3G61880.2 24.315 292 190 10 22 302 54 325 1.09e-12 71.6
MsaG025595 AT3G20130.2 25.000 212 143 6 95 299 73 275 1.75e-12 70.9
MsaG025595 AT1G64950.1 24.046 262 183 7 34 283 32 289 5.21e-12 69.3
MsaG025595 AT5G04660.1 27.365 296 186 9 5 286 14 294 1.48e-11 67.8
MsaG025595 AT2G07020.1 34.375 128 65 5 556 672 407 526 1.87e-11 67.8
MsaG025595 AT1G17540.1 32.867 143 73 5 541 672 386 516 2.72e-11 67.4
MsaG025595 AT3G03470.1 24.180 244 173 5 30 266 27 265 2.76e-11 67.0
MsaG025595 AT1G66540.1 25.568 176 112 4 120 285 1 167 2.86e-11 66.2
MsaG025595 AT1G78940.1 32.812 128 67 4 556 672 365 484 3.69e-11 67.0
MsaG025595 AT3G10570.1 27.206 272 177 7 28 288 37 298 3.73e-11 66.6
MsaG025595 AT1G78940.3 32.812 128 67 4 556 672 436 555 5.02e-11 66.6
MsaG025595 AT1G78940.2 32.812 128 67 4 556 672 436 555 5.87e-11 66.2
MsaG025595 AT1G16760.2 31.250 128 69 4 556 672 438 557 7.26e-11 66.2
MsaG025595 AT1G16760.1 31.250 128 69 4 556 672 438 557 8.52e-11 65.9
MsaG025595 AT3G20960.1 26.020 196 130 5 111 299 13 200 9.68e-11 65.1

Find 128 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATTTCCTTTGCCAATT+TGG 0.136134 5:-10367685 None:intergenic
ACTTCTTTCCCCTGAAATTA+TGG 0.188230 5:+10367743 MsaT025595.1:CDS
CCAAGTTGTATGTGCATTAA+AGG 0.194278 5:-10367633 None:intergenic
TTGAACTTCTAAGTGCTAAA+AGG 0.235146 5:+10367838 MsaT025595.1:CDS
GAACCATAGGCCATAATTTC+AGG 0.242161 5:-10367753 None:intergenic
GCAAGATACTTAGAAGTTTC+AGG 0.242330 5:+10376264 MsaT025595.1:CDS
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5:+10378588 MsaT025595.1:CDS
CCAAGATGAATTTGTTGATT+TGG 0.264136 5:+10368016 MsaT025595.1:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5:+10376851 MsaT025595.1:intron
ATTATTTCCTTTGCCAATTT+GGG 0.274648 5:-10367684 None:intergenic
GTCTATGAGTATGCTGAAAA+TGG 0.278284 5:+10378990 MsaT025595.1:CDS
GAAGATGGTTGAACAAGTTT+TGG 0.284314 5:-10378543 None:intergenic
ATCAGGAATGAAACCAAAAT+TGG 0.285969 5:+10368115 MsaT025595.1:CDS
AAAGTCAATGATTAACCTTA+TGG 0.297432 5:-10376462 None:intergenic
ACAACATCAAAGCTGTGATT+TGG 0.298309 5:+10368309 MsaT025595.1:CDS
ATTTCAGGGGAAAGAAGTTT+TGG 0.303566 5:-10367738 None:intergenic
CATGAACTTTCTCATAAATA+TGG 0.306787 5:+10367609 MsaT025595.1:CDS
TAGTATATGTAACGGTTTAA+TGG 0.310492 5:-10368093 None:intergenic
CTGCATGGAATTTCTTCTGC+TGG 0.322708 5:+10376297 MsaT025595.1:CDS
GATTGTATCATCTCCCAAAT+TGG 0.331577 5:+10367671 MsaT025595.1:CDS
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5:+10378432 MsaT025595.1:CDS
TATCAAGGTTTCCACTTTGT+TGG 0.362254 5:-10368271 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5:-10379139 None:intergenic
CAACATCAAAGCTGTGATTT+GGG 0.372084 5:+10368310 MsaT025595.1:CDS
CCAATGAAATTTCCTCTCAT+TGG 0.373421 5:+10367537 MsaT025595.1:CDS
CCAATGAGAGGAAATTTCAT+TGG 0.377536 5:-10367537 None:intergenic
TCCCCTGAAATTATGGCCTA+TGG 0.378241 5:+10367750 MsaT025595.1:CDS
AACTCTTTGATGGCCGAATC+AGG 0.382129 5:-10376881 None:intergenic
CAAGCCAACAATGTATGAAA+TGG 0.386975 5:+10378758 MsaT025595.1:CDS
GTGGAAATGTCGAGTGGATT+TGG 0.394107 5:+10368050 MsaT025595.1:CDS
TGGAAATCTTGTGAAACTAA+TGG 0.394475 5:+10378932 MsaT025595.1:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5:-10376376 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.403178 5:-10376891 None:intergenic
GAAGGATGAAGGATTTCTTA+AGG 0.405813 5:+10375980 MsaT025595.1:CDS
TTCTGGTTCCATACCTGATT+CGG 0.410204 5:+10376868 MsaT025595.1:CDS
TGCTGGGTTGCTGATCAACC+TGG 0.420026 5:+10376314 MsaT025595.1:CDS
GTCCTTCCACTTGCATTACC+TGG 0.422582 5:+10376983 MsaT025595.1:CDS
CCTTTAATGCACATACAACT+TGG 0.430233 5:+10367633 MsaT025595.1:CDS
AATCACAGCTTTGATGTTGT+TGG 0.434617 5:-10368306 None:intergenic
CTTGTTCAACCATCTTCAAA+TGG 0.436465 5:+10378549 MsaT025595.1:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5:+10379016 MsaT025595.1:CDS
AAACCGTTACATATACTATC+AGG 0.441694 5:+10368098 MsaT025595.1:CDS
TGAACTTCTAAGTGCTAAAA+GGG 0.442740 5:+10367839 MsaT025595.1:CDS
AAGAAATTCCATGCAGTATC+CGG 0.442847 5:-10376290 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5:-10376032 None:intergenic
GTTTACAAGGCTAATATAGA+TGG 0.444846 5:+10378837 MsaT025595.1:CDS
TGCATGGAATTTCTTCTGCT+GGG 0.445487 5:+10376298 MsaT025595.1:CDS
ACATCCATTTCATACATTGT+TGG 0.446716 5:-10378762 None:intergenic
AATATTTCAAGGGCAGCGTT+TGG 0.448802 5:+10367978 MsaT025595.1:CDS
TTGCAGCAGGTGAAGGATGA+AGG 0.460732 5:+10375969 MsaT025595.1:intron
CATCTTGAAGATCAGAATAG+AGG 0.461168 5:+10376418 MsaT025595.1:CDS
GGAAATCTTGTGAAACTAAT+GGG 0.462411 5:+10378933 MsaT025595.1:CDS
CAATCCATTCAATCATCATC+AGG 0.465879 5:+10367909 MsaT025595.1:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5:-10376031 None:intergenic
TGGTAAGTTCAAATATTTCA+AGG 0.469923 5:+10367967 MsaT025595.1:CDS
CCAAATCAACAAATTCATCT+TGG 0.470035 5:-10368016 None:intergenic
GACCAGGTGGCAATTTACTA+AGG 0.472038 5:-10367515 None:intergenic
ACTCGGTGGTTTCGCTTACA+TGG 0.474294 5:+10379057 MsaT025595.1:CDS
AAAGAAGGGAATAACAAAGA+AGG 0.475280 5:-10367442 None:intergenic
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5:+10376900 MsaT025595.1:CDS
CAACGCTAACAAAAGAAAGA+AGG 0.479883 5:-10367457 None:intergenic
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5:+10376908 MsaT025595.1:CDS
AACCATAGGCCATAATTTCA+GGG 0.486503 5:-10367752 None:intergenic
TGAGCCTGATGATGATTGAA+TGG 0.487156 5:-10367913 None:intergenic
TGAAGGATTTCTTAAGGATG+TGG 0.487856 5:+10375986 MsaT025595.1:CDS
GTAGCCATGGATGTTGCAAT+TGG 0.493603 5:+10379095 MsaT025595.1:CDS
ATTAACCTTATGGTTCTGAA+TGG 0.498328 5:-10376452 None:intergenic
CAAAGTTTGTGTGGACAACT+AGG 0.503840 5:+10376234 MsaT025595.1:CDS
GATTGGTGAATCAGTTTACA+AGG 0.505991 5:+10378824 MsaT025595.1:CDS
ATTTGTTGATTTGGTTAGAA+AGG 0.506355 5:+10368025 MsaT025595.1:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5:+10378807 MsaT025595.1:CDS
TGATTTGGTTAGAAAGGTTG+TGG 0.508571 5:+10368031 MsaT025595.1:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5:-10378434 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5:-10379099 None:intergenic
GTATGAAATGGATGTGATCA+TGG 0.524330 5:+10378770 MsaT025595.1:CDS
TTTGATGGCCGAATCAGGTA+TGG 0.524348 5:-10376876 None:intergenic
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5:+10376003 MsaT025595.1:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5:+10376499 MsaT025595.1:CDS
ACTTAGAAGTTTCAGGTCAC+CGG 0.527754 5:+10376271 MsaT025595.1:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5:+10376002 MsaT025595.1:CDS
ATATGTAACGGTTTAATGGA+TGG 0.535317 5:-10368089 None:intergenic
TCTAGTGCTGATACCTCATC+AGG 0.535975 5:-10376206 None:intergenic
ATCTTTGAAAACTTCAAACT+CGG 0.553009 5:+10379040 MsaT025595.1:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5:+10376371 MsaT025595.1:CDS
TTAGTTTCACAAGATTTCCA+TGG 0.557743 5:-10378929 None:intergenic
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5:-10376375 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5:+10376915 MsaT025595.1:CDS
TTGACATGGCTAATTGAGGA+AGG 0.559943 5:-10367563 None:intergenic
GGTAAGTTCAAATATTTCAA+GGG 0.562468 5:+10367968 MsaT025595.1:CDS
GTTTGTGTGGACAACTAGGT+TGG 0.566053 5:+10376238 MsaT025595.1:CDS
ATCTTGAAGATCAGAATAGA+GGG 0.566478 5:+10376419 MsaT025595.1:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5:+10376922 MsaT025595.1:CDS
ATTCCTGATAGTATATGTAA+CGG 0.570539 5:-10368101 None:intergenic
TATATATTATGAGTAAATCC+AGG 0.571391 5:-10376332 None:intergenic
AGAGGAAATTTCATTGGACC+AGG 0.573847 5:-10367531 None:intergenic
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5:-10376916 None:intergenic
TCAGAGAATAACCGTAGCCA+TGG 0.580704 5:+10379082 MsaT025595.1:CDS
TGATGAGGTATCAGCACTAG+AGG 0.580742 5:+10376208 MsaT025595.1:CDS
GACTACCATTCAGAACCATA+AGG 0.587707 5:+10376447 MsaT025595.1:CDS
AGCGTTTGGTGACAAATCAA+AGG 0.590230 5:+10367992 MsaT025595.1:CDS
AACGCTAACAAAAGAAAGAA+GGG 0.590391 5:-10367456 None:intergenic
CTGACAGTCCATACATGACC+AGG 0.594467 5:-10377001 None:intergenic
ATCATCTCCCAAATTGGCAA+AGG 0.594741 5:+10367677 MsaT025595.1:CDS
AATTGCAACATCCATGGCTA+CGG 0.601871 5:-10379093 None:intergenic
TTTGAAAACTTCAAACTCGG+TGG 0.605841 5:+10379043 MsaT025595.1:CDS
TCAGGTCACCGGATACTGCA+TGG 0.610625 5:+10376282 MsaT025595.1:CDS
AGGGATCAAAACTGAACGGT+CGG 0.610669 5:-10378508 None:intergenic
TGAGGAAGGTTACCAATGAG+AGG 0.612316 5:-10367549 None:intergenic
AAGGTTGTGGAAATGTCGAG+TGG 0.612958 5:+10368044 MsaT025595.1:CDS
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5:+10376013 MsaT025595.1:CDS
ACCATAGGCCATAATTTCAG+GGG 0.618893 5:-10367751 None:intergenic
TAGAGGGTGCAAAGTTTGTG+TGG 0.619451 5:+10376225 MsaT025595.1:CDS
ACATGACCAGGTAATGCAAG+TGG 0.620837 5:-10376989 None:intergenic
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5:-10376945 None:intergenic
GGAAATTTCATTGGACCAGG+TGG 0.627122 5:-10367528 None:intergenic
AGCCTTAGTAAATTGCCACC+TGG 0.639304 5:+10367513 MsaT025595.1:CDS
ACAGAATTGGAGTCCTGATG+AGG 0.639931 5:+10376193 MsaT025595.1:intron
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5:-10376985 None:intergenic
AGTTCATGTAGAGCATGATG+TGG 0.644191 5:-10367594 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5:+10376961 MsaT025595.1:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5:+10376209 MsaT025595.1:CDS
GGTGTGTCTTCTGACAATGA+TGG 0.650870 5:+10378954 MsaT025595.1:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5:-10378433 None:intergenic
GAAATGGATGTGATCATGGA+AGG 0.661178 5:+10378774 MsaT025595.1:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5:+10378912 MsaT025595.1:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5:-10378512 None:intergenic
AAAATGGATCACTTGAAGAG+TGG 0.692384 5:+10379006 MsaT025595.1:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5:+10376949 MsaT025595.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 10367426 10379148 10367426 ID=MsaG025595
Chr5 mRNA 10367426 10379148 10367426 ID=MsaT025595.1;Parent=MsaG025595
Chr5 exon 10367426 10368331 10367426 ID=MsaT025595.1.exon1;Parent=MsaT025595.1
Chr5 CDS 10367426 10368331 10367426 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Chr5 exon 10375978 10376052 10375978 ID=MsaT025595.1.exon2;Parent=MsaT025595.1
Chr5 CDS 10375978 10376052 10375978 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Chr5 exon 10376197 10376520 10376197 ID=MsaT025595.1.exon3;Parent=MsaT025595.1
Chr5 CDS 10376197 10376520 10376197 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Chr5 exon 10376866 10377009 10376866 ID=MsaT025595.1.exon4;Parent=MsaT025595.1
Chr5 CDS 10376866 10377009 10376866 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Chr5 exon 10378417 10378609 10378417 ID=MsaT025595.1.exon5;Parent=MsaT025595.1
Chr5 CDS 10378417 10378609 10378417 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Chr5 exon 10378748 10379148 10378748 ID=MsaT025595.1.exon6;Parent=MsaT025595.1
Chr5 CDS 10378748 10379148 10378748 ID=cds.MsaT025595.1;Parent=MsaT025595.1
Gene Sequence

>MsaT025595.1

ATGGAAGCTCAACTTTCCTTCTTTGTTATTCCCTTCTTTCTTTTGTTAGCGTTGCAATGGCTAGCAAAATATTCCAAGACAAAAAAAAGCCTTAGTAAATTGCCACCTGGTCCAATGAAATTTCCTCTCATTGGTAACCTTCCTCAATTAGCCATGTCAAAAAAACGTCCACATCATGCTCTACATGAACTTTCTCATAAATATGGACCTTTAATGCACATACAACTTGGTGAAATTTCTACTGTGATTGTATCATCTCCCAAATTGGCAAAGGAAATAATGAAAACACATGATGCTGCTTTTGCGAATAGGCCAAAACTTCTTTCCCCTGAAATTATGGCCTATGGTTCAAAAGATATTGTATTTTCTCCATATGGTGATTTTTGGAGACAAATGAGAAAAATATGTGTCTTTGAACTTCTAAGTGCTAAAAGGGTTCAATCTTTTTCTTATATTAGAGAAGATGAAACAAAAAAATTGATACAATCCATTCAATCATCATCAGGCTCAACAATCAATCTCACAAGTAGAATTTTCTCAATGGTAAGTTCAAATATTTCAAGGGCAGCGTTTGGTGACAAATCAAAGGACCAAGATGAATTTGTTGATTTGGTTAGAAAGGTTGTGGAAATGTCGAGTGGATTTGGTGTCGATGATTTGTTTCCATCCATTAAACCGTTACATATACTATCAGGAATGAAACCAAAATTGGAGAAAATTCACAAGCGTGTAGATAAAATTATAGAAAACATTATTAGACAACATCAAGAAAAGCGAGAAAAAGCAAAAGAAGACGACAACAATGAAGTTGAGAACGAAGATCTTCTAGATGTTCTTTTGCGAGTCCAACAAAGTGGAAACCTTGATATCAAAATAACAACCAACAACATCAAAGCTGTGATTTGGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTTGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCGGATACTGCATGGAATTTCTTCTGCTGGGTTGCTGATCAACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGAACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGAATTCTGGTTCCATACCTGATTCGGCCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGAAAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGTTCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTATTTTCTGGTCTATGAGTATGCTGAAAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAACTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCGTAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>MsaT025595.1

MEAQLSFFVIPFFLLLALQWLAKYSKTKKSLSKLPPGPMKFPLIGNLPQLAMSKKRPHHALHELSHKYGPLMHIQLGEISTVIVSSPKLAKEIMKTHDAAFANRPKLLSPEIMAYGSKDIVFSPYGDFWRQMRKICVFELLSAKRVQSFSYIREDETKKLIQSIQSSSGSTINLTSRIFSMVSSNISRAAFGDKSKDQDEFVDLVRKVVEMSSGFGVDDLFPSIKPLHILSGMKPKLEKIHKRVDKIIENIIRQHQEKREKAKEDDNNEVENEDLLDVLLRVQQSGNLDIKITTNNIKAVIWVKDEGFLKDVDELFEGICPDERIKSNWSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTAWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFRTIRLIIDFYGISKNADAALKNSGSIPDSAIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHDNDNVTLVSSKFGASPVEMLAENNHNFTASTDRSVLIPVTSLPKLVQPSSNGRKSSSQNLALIIGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNYFLVYEYAENGSLEEWLFSESLKTSNSVVSLTWSQRITVAMDVAIGLQMNILIQE*