AlfalfaGEDB | MsaG025735

M. sativa ssp. caerulea / MsaG025735

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009987 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043565 GO:0044087 GO:0044089 GO:0048518 GO:0048522 GO:0048759 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901348 GO:1901363 GO:1903338 GO:1903340 GO:1903506 GO:1905177 GO:2000112 GO:2000652 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025735	QDX01716.1	99.697	330	1	0	1	330	1	330	0.0	692

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025735	sp\|Q9SL41\|NAC37_ARATH	62.849	358	96	12	1	333	1	346	1.41e-145	418

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025735	tr\|A0A6B7JGE3\|A0A6B7JGE3_MEDSF	99.697	330	1	0	1	330	1	330	0.0	692

TFs/TRs:

Gene ID	Type	Classification
MsaG025735	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000708	MsaG025735	0.805746	1.946789e-49	3.003132e-47
MsaG000802	MsaG025735	0.808823	4.367471e-50	7.249829e-48
MsaG001414	MsaG025735	0.806667	1.248172e-49	1.967799e-47
MsaG003197	MsaG025735	0.851636	1.491381e-60	8.552580e-58
MsaG003374	MsaG025735	0.812335	7.673381e-51	1.387542e-48
MsaG003648	MsaG025735	0.808272	5.721281e-50	9.371681e-48
MsaG003961	MsaG025735	0.835061	3.805652e-56	1.277118e-53
MsaG005020	MsaG025735	0.869646	5.378357e-66	6.140869e-63
MsaG006074	MsaG025735	0.815673	1.419812e-51	2.791828e-49
MsaG006279	MsaG025735	0.831993	2.200919e-55	6.747118e-53
MsaG006868	MsaG025735	0.869107	8.037659e-66	8.972539e-63
MsaG009346	MsaG025735	0.844230	1.608346e-58	7.185595e-56
MsaG011076	MsaG025735	0.801049	1.811237e-48	2.507484e-46
MsaG011366	MsaG025735	0.804516	3.511966e-49	5.264833e-47
MsaG011561	MsaG025735	0.845049	9.703023e-59	4.453697e-56
MsaG015404	MsaG025735	0.812252	7.998849e-51	1.443370e-48
MsaG017298	MsaG025735	0.823251	2.704364e-53	6.486804e-51
MsaG018218	MsaG025735	0.817732	4.928558e-52	1.021617e-49
MsaG018791	MsaG025735	0.801935	1.194391e-48	1.687161e-46
MsaG021602	MsaG025735	0.819038	2.502481e-52	5.366237e-50
MsaG021767	MsaG025735	0.820087	1.446061e-52	3.187820e-50
MsaG022065	MsaG025735	0.805568	2.120394e-49	3.257313e-47
MsaG023958	MsaG025735	0.823265	2.684103e-53	6.440709e-51
MsaG025735	MsaG025778	0.828677	1.409911e-54	3.929377e-52
MsaG025735	MsaG026777	0.839084	3.607026e-57	1.368340e-54
MsaG025735	MsaG029281	0.832984	1.253339e-55	3.954588e-53
MsaG025735	MsaG029619	0.862471	9.807796e-64	8.383849e-61
MsaG025735	MsaG029761	0.817423	5.781938e-52	1.189044e-49
MsaG025735	MsaG032113	0.801783	1.282975e-48	1.806007e-46
MsaG025735	MsaG032487	0.864750	1.939029e-64	1.813633e-61
MsaG025735	MsaG033853	0.818068	4.141889e-52	8.660348e-50
MsaG025735	MsaG035059	0.857278	3.544113e-62	2.487888e-59
MsaG025735	MsaG039962	0.842936	3.553464e-58	1.522683e-55
MsaG025735	MsaG042769	0.844797	1.133687e-58	5.160310e-56
MsaG025735	MsaG044063	0.801570	1.418331e-48	1.986891e-46
MsaG025735	MsaG046539	0.847559	2.023485e-59	1.009637e-56
MsaG025735	MsaG046573	0.855023	1.610185e-61	1.041066e-58
MsaG025735	MsaG047138	0.813112	5.197578e-51	9.582096e-49
MsaG025735	MsaG002459	0.815802	1.329259e-51	2.622297e-49
MsaG025735	MsaG008723	0.827195	3.191724e-54	8.533042e-52
MsaG025735	MsaG013368	0.849297	6.719265e-60	3.555502e-57
MsaG025735	MsaG020999	0.842638	4.259879e-58	1.808144e-55
MsaG025735	MsaG027534	0.812156	8.391364e-51	1.510599e-48
MsaG025735	MsaG025853	0.811345	1.257492e-50	2.219170e-48
MsaG025735	MsaG031590	0.838001	6.846416e-57	2.511016e-54
MsaG025735	MsaG031955	0.860065	5.260681e-63	4.100538e-60
MsaG025735	MsaG038129	0.822270	4.564222e-53	1.066147e-50
MsaG025735	MsaG038131	0.810105	2.325388e-50	3.981230e-48
MsaG025735	MsaG035247	0.814707	2.321429e-51	4.454438e-49
MsaG025735	MsaG038588	0.805562	2.126916e-49	3.266833e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025735	MtrunA17_Chr5g0405211	98.485	330	5	0	1	330	1	330	0.0	686
MsaG025735	MtrunA17_Chr8g0372121	62.985	335	72	8	4	331	2	291	2.57e-140	399
MsaG025735	MtrunA17_Chr4g0018391	57.595	316	94	8	6	294	5	307	3.41e-115	337
MsaG025735	MtrunA17_Chr4g0056541	56.731	312	98	6	6	294	5	302	1.56e-112	331
MsaG025735	MtrunA17_Chr5g0398971	54.785	303	114	9	6	294	5	298	3.74e-106	314
MsaG025735	MtrunA17_Chr1g0200561	49.550	333	132	8	4	320	15	327	4.87e-102	304
MsaG025735	MtrunA17_Chr2g0309331	49.669	302	126	6	3	290	5	294	9.47e-92	277
MsaG025735	MtrunA17_Chr8g0346001	44.315	343	130	7	5	297	12	343	2.21e-85	264
MsaG025735	MtrunA17_Chr4g0017921	73.418	158	41	1	1	158	1	157	9.99e-85	259
MsaG025735	MtrunA17_Chr3g0091921	50.526	190	81	4	8	193	16	196	2.13e-60	196
MsaG025735	MtrunA17_Chr2g0309891	56.209	153	63	2	8	157	6	157	1.07e-59	195
MsaG025735	MtrunA17_Chr4g0060931	52.047	171	75	3	8	174	17	184	3.83e-59	194
MsaG025735	MtrunA17_Chr6g0484441	54.545	154	67	1	4	157	1	151	5.14e-59	192
MsaG025735	MtrunA17_Chr6g0481091	55.263	152	65	2	8	157	6	156	3.50e-58	187
MsaG025735	MtrunA17_Chr3g0139331	40.000	245	129	5	5	235	8	248	3.27e-57	189
MsaG025735	MtrunA17_Chr1g0183741	50.000	176	81	4	1	174	3	173	8.74e-57	185
MsaG025735	MtrunA17_Chr3g0109821	53.205	156	69	2	8	160	6	160	1.37e-56	194
MsaG025735	MtrunA17_Chr5g0433781	52.903	155	70	2	8	160	6	159	4.16e-56	192
MsaG025735	MtrunA17_Chr7g0253011	54.375	160	62	4	8	159	17	173	7.65e-56	186
MsaG025735	MtrunA17_Chr7g0261411	53.503	157	66	4	1	155	3	154	1.33e-55	182
MsaG025735	MtrunA17_Chr2g0316971	52.830	159	66	3	8	160	23	178	3.59e-55	184
MsaG025735	MtrunA17_Chr1g0147421	42.857	203	96	4	5	204	24	209	4.09e-55	184
MsaG025735	MtrunA17_Chr6g0453451	51.875	160	70	2	8	163	20	176	4.60e-55	182
MsaG025735	MtrunA17_Chr4g0042561	50.909	165	71	3	1	158	1	162	6.71e-55	180
MsaG025735	MtrunA17_Chr2g0312321	52.532	158	65	4	4	157	7	158	1.46e-54	181
MsaG025735	MtrunA17_Chr5g0417791	50.318	157	69	2	8	158	3	156	1.87e-54	179
MsaG025735	MtrunA17_Chr7g0252971	46.196	184	79	4	1	168	1	180	2.54e-54	181
MsaG025735	MtrunA17_Chr8g0361731	36.458	288	152	11	2	266	8	287	3.20e-54	182
MsaG025735	MtrunA17_Chr3g0130731	49.133	173	71	4	8	175	7	167	6.46e-54	178
MsaG025735	MtrunA17_Chr5g0417001	45.699	186	84	5	2	175	8	188	1.17e-53	181
MsaG025735	MtrunA17_Chr4g0054791	46.561	189	91	4	8	187	6	193	1.18e-53	179
MsaG025735	MtrunA17_Chr6g0453131	46.857	175	78	4	10	172	17	188	1.52e-53	180
MsaG025735	MtrunA17_Chr7g0214071	50.299	167	75	3	5	169	12	172	2.23e-53	176
MsaG025735	MtrunA17_Chr2g0318081	44.670	197	101	3	8	202	16	206	3.10e-53	178
MsaG025735	MtrunA17_Chr2g0318101	47.126	174	74	4	3	161	10	180	4.24e-52	176
MsaG025735	MtrunA17_Chr7g0217721	48.387	186	76	3	1	169	12	194	4.99e-52	175
MsaG025735	MtrunA17_Chr6g0461661	49.398	166	75	4	8	167	18	180	1.52e-51	175
MsaG025735	MtrunA17_Chr1g0197351	44.175	206	100	6	6	197	40	244	3.35e-51	176
MsaG025735	MtrunA17_Chr5g0400461	50.943	159	65	4	8	157	6	160	4.60e-51	172
MsaG025735	MtrunA17_Chr8g0384721	51.592	157	66	3	8	158	7	159	6.27e-51	171
MsaG025735	MtrunA17_Chr3g0144271	45.714	210	94	6	5	211	20	212	8.21e-51	174
MsaG025735	MtrunA17_Chr4g0047841	42.487	193	81	4	8	173	15	204	8.28e-51	172
MsaG025735	MtrunA17_Chr3g0124761	49.405	168	75	4	8	169	7	170	1.47e-50	169
MsaG025735	MtrunA17_Chr7g0263931	49.068	161	71	3	5	157	8	165	9.06e-50	169
MsaG025735	MtrunA17_Chr8g0359921	46.875	160	78	2	8	163	14	170	6.57e-49	166
MsaG025735	MtrunA17_Chr3g0130101	49.669	151	71	3	10	157	9	157	6.69e-49	167
MsaG025735	MtrunA17_Chr7g0217711	55.797	138	58	1	1	138	12	146	7.86e-49	161
MsaG025735	MtrunA17_Chr5g0428991	52.288	153	70	2	8	158	25	176	1.51e-48	172
MsaG025735	MtrunA17_Chr3g0128111	51.678	149	69	2	11	157	45	192	2.00e-48	163
MsaG025735	MtrunA17_Chr2g0326361	48.734	158	70	3	8	157	14	168	8.56e-47	161
MsaG025735	MtrunA17_Chr3g0128151	50.658	152	72	2	8	157	22	172	1.69e-46	166
MsaG025735	MtrunA17_Chr1g0201021	52.672	131	61	1	10	140	21	150	2.27e-46	165
MsaG025735	MtrunA17_Chr2g0311651	41.000	200	98	4	8	189	21	218	7.95e-46	158
MsaG025735	MtrunA17_Chr5g0442771	43.114	167	78	3	5	157	15	178	1.37e-44	155
MsaG025735	MtrunA17_Chr3g0092671	46.154	156	81	3	10	163	7	161	4.41e-44	158
MsaG025735	MtrunA17_Chr4g0076731	46.053	152	78	2	7	157	53	201	6.82e-44	156
MsaG025735	MtrunA17_Chr4g0038751	44.311	167	80	4	1	160	4	164	8.18e-44	152
MsaG025735	MtrunA17_Chr2g0311661	44.444	171	75	4	8	160	20	188	9.28e-44	152
MsaG025735	MtrunA17_Chr8g0364791	46.753	154	73	3	10	158	8	157	1.10e-43	155
MsaG025735	MtrunA17_Chr1g0197361	45.513	156	82	3	10	163	10	164	5.31e-43	156
MsaG025735	MtrunA17_Chr8g0384201	46.104	154	74	3	10	158	8	157	1.64e-42	153
MsaG025735	MtrunA17_Chr8g0385991	43.860	171	81	5	8	168	14	179	1.78e-40	141
MsaG025735	MtrunA17_Chr3g0131911	45.181	166	74	4	8	161	14	174	5.86e-39	138
MsaG025735	MtrunA17_Chr2g0321631	45.912	159	71	7	9	155	5	160	9.33e-36	130
MsaG025735	MtrunA17_Chr4g0026141	42.945	163	79	5	4	155	1	160	1.06e-35	130
MsaG025735	MtrunA17_Chr8g0345671	44.295	149	75	5	8	153	11	154	9.74e-34	128
MsaG025735	MtrunA17_Chr3g0113001	42.675	157	77	5	52	201	4	154	1.85e-33	125
MsaG025735	MtrunA17_Chr4g0050701	39.375	160	76	4	8	157	11	159	1.02e-31	117
MsaG025735	MtrunA17_Chr8g0345691	44.295	149	75	5	8	153	12	155	1.89e-31	122
MsaG025735	MtrunA17_Chr2g0321741	37.349	166	81	5	28	193	12	154	2.32e-30	118
MsaG025735	MtrunA17_Chr8g0345711	36.905	168	88	6	4	155	8	173	5.22e-30	112
MsaG025735	MtrunA17_Chr7g0266701	36.646	161	91	4	8	157	4	164	3.86e-29	112
MsaG025735	MtrunA17_Chr3g0113031	43.382	136	61	4	74	201	3	130	1.13e-28	111
MsaG025735	MtrunA17_Chr8g0345731	41.353	133	72	4	8	135	24	155	1.08e-25	101
MsaG025735	MtrunA17_Chr7g0243371	48.780	82	40	1	64	143	17	98	1.22e-22	91.3
MsaG025735	MtrunA17_Chr8g0345721	34.524	168	73	6	4	135	26	192	3.20e-22	92.8
MsaG025735	MtrunA17_Chr8g0345701	36.735	147	72	6	6	135	5	147	5.21e-22	91.3
MsaG025735	MtrunA17_Chr8g0345741	41.667	120	65	4	19	135	2	119	2.91e-21	89.0
MsaG025735	MtrunA17_Chr8g0384351	35.802	162	79	7	8	167	10	148	8.89e-21	88.2
MsaG025735	MtrunA17_Chr3g0130321	28.049	164	93	6	8	156	7	160	1.11e-13	69.3
MsaG025735	MtrunA17_Chr7g0251661	31.298	131	85	4	5	134	7	133	1.67e-13	67.4
MsaG025735	MtrunA17_Chr7g0251651	30.469	128	84	4	8	134	18	141	6.14e-13	66.6
MsaG025735	MtrunA17_Chr7g0251671	28.058	139	95	4	1	138	3	137	6.24e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG025735	AT2G18060.3	62.849	358	96	12	1	333	1	346	1.43e-146	418
MsaG025735	AT2G18060.1	62.849	358	96	12	1	333	1	346	1.43e-146	418
MsaG025735	AT4G36160.2	64.848	330	86	12	1	310	5	324	1.60e-142	408
MsaG025735	AT4G36160.1	64.848	330	86	12	1	310	1	320	1.84e-142	408
MsaG025735	AT4G36160.3	64.848	330	86	12	1	310	1	320	1.84e-142	408
MsaG025735	AT5G66300.1	59.603	302	82	9	6	291	9	286	1.50e-118	344
MsaG025735	AT1G12260.1	51.462	342	109	8	6	294	5	342	1.33e-107	320
MsaG025735	AT1G62700.1	49.858	353	125	7	6	315	5	348	9.75e-107	318
MsaG025735	AT1G62700.2	49.858	353	125	7	6	315	5	348	9.75e-107	318
MsaG025735	AT1G12260.2	54.452	292	123	4	6	294	5	289	1.39e-103	308
MsaG025735	AT1G71930.2	51.186	295	120	5	4	293	5	280	2.39e-98	294
MsaG025735	AT1G71930.1	51.186	295	120	5	4	293	5	280	2.39e-98	294
MsaG025735	AT5G62380.2	50.831	301	129	6	1	291	1	292	3.21e-96	289
MsaG025735	AT5G62380.1	50.831	301	129	6	1	291	1	292	3.21e-96	289
MsaG025735	AT2G46770.1	50.489	307	102	9	5	291	13	289	3.96e-91	277
MsaG025735	AT1G32770.1	47.231	307	125	8	5	292	13	301	1.14e-84	260
MsaG025735	AT3G61910.1	48.397	312	91	9	5	291	8	274	6.48e-83	254
MsaG025735	AT4G10350.1	73.203	153	39	1	8	158	9	161	2.30e-82	253
MsaG025735	AT1G33280.1	70.253	158	46	1	1	158	1	157	1.77e-81	250
MsaG025735	AT1G79580.3	48.355	304	120	9	8	289	17	305	4.61e-81	251
MsaG025735	AT1G79580.5	48.355	304	120	9	8	289	17	305	4.61e-81	251
MsaG025735	AT1G79580.4	48.355	304	120	9	8	289	17	305	4.61e-81	251
MsaG025735	AT1G79580.2	48.355	304	120	9	8	289	17	305	4.61e-81	251
MsaG025735	AT1G79580.1	48.355	304	120	9	8	289	17	305	4.61e-81	251
MsaG025735	AT2G18060.2	52.963	270	91	12	88	333	1	258	1.43e-77	239
MsaG025735	AT3G18400.1	56.329	158	65	2	4	160	1	155	2.42e-62	201
MsaG025735	AT3G17730.1	54.430	158	69	2	8	163	6	162	8.55e-60	192
MsaG025735	AT5G39610.1	52.695	167	72	3	8	170	20	183	6.29e-59	191
MsaG025735	AT2G24430.2	52.976	168	69	4	5	169	13	173	1.62e-58	191
MsaG025735	AT2G24430.1	52.976	168	69	4	5	169	13	173	1.62e-58	191
MsaG025735	AT5G07680.2	52.410	166	72	3	8	169	3	165	3.75e-58	190
MsaG025735	AT5G07680.1	52.410	166	72	3	8	169	17	179	5.51e-58	190
MsaG025735	AT5G61430.1	55.844	154	61	3	8	157	16	166	1.27e-57	190
MsaG025735	AT1G69490.1	51.250	160	69	2	5	158	6	162	4.64e-57	186
MsaG025735	AT5G17260.1	54.248	153	66	2	8	157	6	157	1.17e-56	191
MsaG025735	AT1G76420.1	55.975	159	64	3	2	157	16	171	1.30e-56	187
MsaG025735	AT3G03200.1	54.248	153	66	2	8	157	6	157	4.02e-56	190
MsaG025735	AT1G65910.1	54.605	152	66	2	8	157	6	156	4.75e-56	192
MsaG025735	AT3G29035.1	51.875	160	70	2	8	163	24	180	1.26e-55	184
MsaG025735	AT3G10490.1	44.059	202	103	3	3	201	22	216	1.42e-55	181
MsaG025735	AT1G56010.2	41.518	224	113	6	4	220	15	227	8.90e-55	182
MsaG025735	AT1G54330.1	56.000	150	64	2	8	157	6	153	1.72e-54	181
MsaG025735	AT3G10490.2	41.818	220	117	4	3	219	22	233	1.98e-54	184
MsaG025735	AT5G18270.1	50.877	171	73	5	8	170	21	188	5.66e-54	180
MsaG025735	AT3G10480.1	44.792	192	96	3	6	194	25	209	1.01e-53	182
MsaG025735	AT5G53950.1	51.205	166	72	3	8	167	17	179	1.56e-53	180
MsaG025735	AT3G15170.1	51.497	167	72	4	5	165	17	180	1.95e-53	178
MsaG025735	AT5G18270.2	50.292	171	74	5	8	170	21	188	2.10e-53	179
MsaG025735	AT5G46590.1	53.205	156	68	3	6	157	4	158	2.60e-53	177
MsaG025735	AT4G10350.2	73.148	108	27	1	53	158	7	114	4.26e-53	177
MsaG025735	AT3G12977.1	49.383	162	76	3	4	162	14	172	4.85e-53	176
MsaG025735	AT5G46590.2	58.088	136	55	2	6	140	4	138	1.36e-52	175
MsaG025735	AT3G04060.1	49.697	165	75	4	8	167	20	181	2.55e-52	176
MsaG025735	AT3G04070.2	48.795	166	68	4	6	157	8	170	4.99e-52	175
MsaG025735	AT3G10480.2	44.792	192	95	4	6	194	25	208	8.72e-52	177
MsaG025735	AT4G27410.2	49.693	163	76	3	8	168	14	172	8.76e-52	173
MsaG025735	AT4G17980.1	51.266	158	70	3	6	157	4	160	1.32e-51	172
MsaG025735	AT5G63790.1	48.235	170	77	3	8	170	50	215	1.52e-51	173
MsaG025735	AT5G63790.2	48.235	170	77	3	8	170	60	225	1.63e-51	173
MsaG025735	AT4G17980.2	51.266	158	70	3	6	157	4	160	2.32e-51	172
MsaG025735	AT3G15500.1	50.000	156	73	2	7	160	13	165	3.70e-51	172
MsaG025735	AT2G43000.1	49.057	159	75	3	10	165	20	175	3.93e-51	171
MsaG025735	AT2G33480.2	49.045	157	74	1	8	164	15	165	5.80e-51	170
MsaG025735	AT5G04410.1	46.927	179	84	5	6	180	7	178	7.31e-51	177
MsaG025735	AT4G28530.1	41.600	250	111	10	1	229	3	238	9.41e-51	172
MsaG025735	AT5G39820.1	41.237	194	84	4	1	169	13	201	1.21e-50	172
MsaG025735	AT1G77450.1	51.613	155	66	3	9	158	11	161	1.37e-50	169
MsaG025735	AT5G08790.1	50.625	160	68	3	8	160	7	162	2.92e-50	169
MsaG025735	AT2G33480.1	49.057	159	73	2	8	164	15	167	3.82e-50	168
MsaG025735	AT1G52890.1	49.677	155	73	2	8	160	14	165	5.54e-50	169
MsaG025735	AT3G10500.1	50.323	155	72	3	6	157	7	159	6.58e-50	175
MsaG025735	AT1G61110.1	47.619	168	70	4	8	160	16	180	7.59e-50	169
MsaG025735	AT3G10480.3	39.286	224	95	3	6	194	25	242	8.66e-50	174
MsaG025735	AT1G33060.1	53.165	158	68	4	3	157	20	174	2.20e-49	175
MsaG025735	AT1G33060.2	53.165	158	68	4	3	157	20	174	2.22e-49	175
MsaG025735	AT1G01720.1	49.682	157	69	3	8	158	7	159	3.52e-49	166
MsaG025735	AT4G35580.1	48.876	178	87	3	3	178	5	180	4.37e-49	172
MsaG025735	AT4G27410.3	46.893	177	77	4	8	168	14	189	5.33e-49	167
MsaG025735	AT4G35580.3	48.876	178	87	3	3	178	5	180	6.28e-49	172
MsaG025735	AT4G35580.2	48.876	178	87	3	3	178	5	180	7.01e-49	172
MsaG025735	AT3G04070.1	53.676	136	55	3	6	136	8	140	6.51e-48	165
MsaG025735	AT3G15510.1	49.068	161	64	4	12	157	21	178	6.59e-48	165
MsaG025735	AT1G26870.1	45.143	175	78	4	2	162	10	180	8.01e-48	166
MsaG025735	AT5G13180.1	51.250	160	64	5	8	161	14	165	1.84e-47	160
MsaG025735	AT5G24590.2	53.247	154	68	4	8	158	13	165	2.77e-47	166
MsaG025735	AT3G49530.2	50.000	158	74	5	3	157	9	164	2.01e-46	162
MsaG025735	AT3G49530.1	50.000	158	74	5	3	157	9	164	4.12e-46	163
MsaG025735	AT1G32510.1	45.679	162	77	4	6	157	4	164	1.40e-45	157
MsaG025735	AT2G27300.1	42.690	171	91	3	1	171	7	170	2.08e-45	158
MsaG025735	AT2G02450.1	45.395	152	79	2	7	157	50	198	1.37e-44	157
MsaG025735	AT2G02450.2	45.395	152	79	2	7	157	50	198	1.97e-44	157
MsaG025735	AT1G34180.3	45.865	133	71	1	10	142	18	149	9.23e-43	154
MsaG025735	AT5G22290.1	42.424	165	88	3	3	166	15	173	9.25e-43	151
MsaG025735	AT1G34190.1	44.371	151	79	3	10	157	18	166	1.03e-42	155
MsaG025735	AT1G34180.1	45.865	133	71	1	10	142	18	149	2.43e-42	154
MsaG025735	AT5G64060.1	44.737	152	77	3	10	157	8	156	3.41e-42	150
MsaG025735	AT5G09330.5	46.053	152	75	3	10	157	8	156	1.21e-41	151
MsaG025735	AT5G09330.2	46.053	152	75	3	10	157	8	156	1.21e-41	151
MsaG025735	AT5G09330.4	46.053	152	75	3	10	157	8	156	1.21e-41	151
MsaG025735	AT5G09330.3	46.053	152	75	3	10	157	8	156	1.21e-41	151
MsaG025735	AT5G09330.1	46.053	152	75	3	10	157	8	156	1.21e-41	151
MsaG025735	AT3G12910.1	44.318	176	73	6	10	165	23	193	2.38e-41	146
MsaG025735	AT1G34180.4	40.373	161	83	3	10	157	18	178	2.40e-41	150
MsaG025735	AT1G52880.1	45.455	165	73	3	12	162	21	182	3.76e-41	146
MsaG025735	AT2G17040.1	42.208	154	80	3	10	160	8	155	4.24e-41	145
MsaG025735	AT1G34180.2	43.056	144	71	2	10	142	18	161	6.80e-41	150
MsaG025735	AT5G04395.1	44.516	155	73	3	3	144	23	177	1.07e-40	141
MsaG025735	AT1G56010.1	43.478	161	77	4	66	220	8	160	2.77e-39	140
MsaG025735	AT3G44290.2	44.800	125	67	1	10	134	16	138	1.20e-38	137
MsaG025735	AT3G44290.1	44.800	125	67	1	10	134	16	138	6.80e-38	138
MsaG025735	AT5G61430.2	61.224	98	34	2	64	157	6	103	1.19e-37	136
MsaG025735	AT1G32870.2	43.506	154	80	3	8	157	10	160	1.46e-36	138
MsaG025735	AT1G32870.1	43.506	154	80	3	8	157	10	160	1.47e-36	138
MsaG025735	AT1G32870.3	43.506	154	80	3	8	157	46	196	2.49e-36	138
MsaG025735	AT3G12977.2	52.212	113	48	3	53	162	10	119	2.75e-36	131
MsaG025735	AT2G33480.3	49.515	103	50	1	64	164	8	110	8.93e-31	116
MsaG025735	AT5G22380.1	43.478	138	68	5	4	134	1	135	2.43e-27	107
MsaG025735	AT4G28530.2	43.165	139	56	4	1	120	3	137	8.24e-27	108
MsaG025735	AT3G44350.2	37.821	156	85	6	11	157	8	160	2.98e-26	105
MsaG025735	AT4G01520.1	37.748	151	85	5	9	154	5	151	4.17e-26	105
MsaG025735	AT1G02230.1	42.941	170	83	9	9	170	4	167	4.54e-26	107
MsaG025735	AT3G44350.1	38.931	131	71	4	11	135	8	135	7.17e-26	101
MsaG025735	AT4G01540.3	37.584	149	84	5	11	154	7	151	8.05e-25	104
MsaG025735	AT4G01540.4	37.584	149	84	5	11	154	7	151	1.05e-24	103
MsaG025735	AT4G01540.1	37.584	149	84	5	11	154	7	151	1.15e-24	104
MsaG025735	AT4G01540.2	37.584	149	84	5	11	154	7	151	1.29e-24	103
MsaG025735	AT5G64530.1	32.961	179	87	6	8	168	3	166	1.42e-24	99.0
MsaG025735	AT4G01550.1	37.086	151	87	4	11	157	7	153	1.55e-24	103
MsaG025735	AT3G04420.2	40.310	129	72	3	9	134	4	130	3.63e-24	100
MsaG025735	AT1G02250.1	39.645	169	89	8	9	170	4	166	1.05e-23	100
MsaG025735	AT3G04420.1	40.310	129	72	3	9	134	4	130	1.27e-23	100
MsaG025735	AT5G64530.2	39.695	131	62	5	8	136	3	118	2.03e-23	95.1
MsaG025735	AT1G01010.1	37.662	154	78	7	11	153	6	152	1.00e-22	98.6
MsaG025735	AT2G43000.2	45.833	96	49	2	73	165	2	97	4.51e-22	92.4
MsaG025735	AT3G10490.4	35.971	139	79	3	84	219	2	133	1.12e-21	94.7
MsaG025735	AT3G10490.3	35.971	139	79	3	84	219	2	133	1.12e-21	94.7
MsaG025735	AT1G02220.1	39.231	130	71	4	8	134	3	127	5.84e-20	90.1
MsaG025735	AT5G50820.1	37.857	140	62	6	8	138	17	140	2.43e-19	85.1
MsaG025735	AT3G56530.1	27.815	151	105	2	7	155	51	199	7.62e-17	80.5
MsaG025735	AT5G22290.2	41.558	77	41	1	90	166	2	74	2.94e-15	74.7
MsaG025735	AT5G14000.1	26.786	168	115	3	8	173	15	176	7.37e-15	72.8
MsaG025735	AT5G14000.2	29.771	131	85	2	8	136	15	140	8.29e-14	68.6
MsaG025735	AT3G55210.1	25.466	161	103	5	8	155	11	167	2.88e-12	66.6
MsaG025735	AT3G04430.1	34.074	135	72	6	14	135	6	136	1.50e-11	63.2

Find 67 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATAAGATGAAACTAAT+TGG	0.196107	5:+12108743	MsaT025735.1:CDS
AGGCTTGAATCTGATGAAAA+TGG	0.260946	5:+12108842	MsaT025735.1:CDS
TGTTACTGCAGCAGGGTAAT+AGG	0.270150	5:+12110916	MsaT025735.1:CDS
GAGCTACCATGGCTGGGTTT+TGG	0.285122	5:+12108693	MsaT025735.1:CDS
CAATCAGATTTCTGTCCATT+AGG	0.301864	5:-12108803	None:intergenic
AATCAGATTTCTGTCCATTA+GGG	0.308366	5:-12108802	None:intergenic
CTGTTAGTTCTTGTCCCTGT+TGG	0.308789	5:-12108671	None:intergenic
ATAATAATAGCAACCTGTTT+TGG	0.310133	5:-12110734	None:intergenic
CTTACACATGTTATAACTTT+GGG	0.324312	5:-12110577	None:intergenic
GTGCTTGGCCTCTTTACTAA+TGG	0.340736	5:-12110669	None:intergenic
GGAGTGTTGTTGTCAAGTTT+TGG	0.348018	5:+12110858	MsaT025735.1:CDS
GCTTACACATGTTATAACTT+TGG	0.349128	5:-12110578	None:intergenic
CTTGAGATTAGTTGATCAAT+TGG	0.382802	5:-12110534	None:intergenic
ATGATAAGATGAAACTAATT+GGG	0.389752	5:+12108744	MsaT025735.1:CDS
ATTGGATCATGCATGAATAT+AGG	0.391373	5:+12108822	MsaT025735.1:CDS
GGCATTGATGTTACTGCAGC+AGG	0.393119	5:+12110908	MsaT025735.1:CDS
GTTACTGCAGCAGGGTAATA+GGG	0.411682	5:+12110917	MsaT025735.1:CDS
CTACAAATACAGTTACTGAT+TGG	0.424836	5:+12110778	MsaT025735.1:CDS
CATGTGTCCCACCAGGGTTT+CGG	0.436059	5:+12108256	MsaT025735.1:CDS
CCAACTGATGAAGAACTTGT+TGG	0.437262	5:+12108285	MsaT025735.1:CDS
CTTTGGGATAAATAGCTTTG+AGG	0.440208	5:-12110561	None:intergenic
GAGAGCTCTTGATAAGTTTG+TGG	0.441089	5:+12110800	MsaT025735.1:CDS
ACTAACAGAGCTACCATGGC+TGG	0.441475	5:+12108686	MsaT025735.1:CDS
CTTCATTGCCATTAGTAAAG+AGG	0.446048	5:+12110661	MsaT025735.1:CDS
ATGACATTAACGACCAAAAC+AGG	0.448853	5:+12110721	MsaT025735.1:CDS
CTCTTTACTAATGGCAATGA+AGG	0.455370	5:-12110660	None:intergenic
ATGGAGTCATGTGTCCCACC+AGG	0.483355	5:+12108249	MsaT025735.1:CDS
ATGAAATGGCAGAGAGATGC+AGG	0.483796	5:+12108591	MsaT025735.1:intron
TACAAAGGAAGAGCCCCTAA+TGG	0.487100	5:+12108788	MsaT025735.1:CDS
CCAACAAGTTCTTCATCAGT+TGG	0.496930	5:-12108285	None:intergenic
CAACAAGTTCTTCATCAGTT+GGG	0.501223	5:-12108284	None:intergenic
CTAATGGACAGAAATCTGAT+TGG	0.503538	5:+12108804	MsaT025735.1:CDS
ATTGAACCATGGGATCTTCA+AGG	0.511774	5:+12108381	MsaT025735.1:CDS
TGGCAGAGAGATGCAGGATC+GGG	0.511955	5:+12108597	MsaT025735.1:intron
TCTTTATCGTATTGAACCAT+GGG	0.515850	5:+12108371	MsaT025735.1:CDS
ATCAATGCCATGTCCGAGCT+AGG	0.517059	5:-12110894	None:intergenic
CTATGAAGAAGCTGCAAGTA+GGG	0.522407	5:+12110491	MsaT025735.1:CDS
TGGTGGGACACATGACTCCA+TGG	0.525120	5:-12108247	None:intergenic
CATGAAGTTGAAACTGATCA+AGG	0.526644	5:+12110837	MsaT025735.1:CDS
TGATGAAAATGGACCTCCAC+AGG	0.528524	5:+12108853	MsaT025735.1:CDS
ATCTTTATCGTATTGAACCA+TGG	0.534260	5:+12108370	MsaT025735.1:CDS
ATGGCAGAGAGATGCAGGAT+CGG	0.542557	5:+12108596	MsaT025735.1:intron
AGATGAAACTAATTGGGATG+AGG	0.547240	5:+12108750	MsaT025735.1:CDS
AACAAATAATAACCCTAGCT+CGG	0.552141	5:+12110881	MsaT025735.1:CDS
CGATCTCTCTGATAACATCA+AGG	0.569395	5:-12108347	None:intergenic
TCTATGAAGAAGCTGCAAGT+AGG	0.576413	5:+12110490	MsaT025735.1:CDS
TCAATGCCATGTCCGAGCTA+GGG	0.581122	5:-12110893	None:intergenic
AAGCACAATGTCTCTAGTAT+CGG	0.584153	5:+12110686	MsaT025735.1:CDS
TAATAACCCTAGCTCGGACA+TGG	0.592989	5:+12110887	MsaT025735.1:CDS
GATACTAGAGACATTGTGCT+TGG	0.594750	5:-12110684	None:intergenic
CAATTGATCAACTAATCTCA+AGG	0.597995	5:+12110535	MsaT025735.1:CDS
AAGAACTAACAGAGCTACCA+TGG	0.599903	5:+12108682	MsaT025735.1:CDS
GTTGGGTGGAACCGAAACCC+TGG	0.606391	5:-12108267	None:intergenic
CAAGTTCTTCATCAGTTGGG+TGG	0.606733	5:-12108281	None:intergenic
ATCAGATTTCTGTCCATTAG+GGG	0.607393	5:-12108801	None:intergenic
GGTTGATTAGTTACCTGTGG+AGG	0.611776	5:-12108866	None:intergenic
TGGAGTCATGTGTCCCACCA+GGG	0.614596	5:+12108250	MsaT025735.1:CDS
CTAACAGAGCTACCATGGCT+GGG	0.617618	5:+12108687	MsaT025735.1:CDS
TTGATCAATTGGATCCACAA+TGG	0.624058	5:-12110523	None:intergenic
TGTATACCTTGAAGATCCCA+TGG	0.629021	5:-12108387	None:intergenic
AATGAAGGACTTTCAAGCTG+AGG	0.644381	5:-12110645	None:intergenic
AGCTTTCCAAAACCCAGCCA+TGG	0.648009	5:-12108699	None:intergenic
GCATTGATGTTACTGCAGCA+GGG	0.654680	5:+12110909	MsaT025735.1:CDS
TAGGGTCAACAATTCCATTG+TGG	0.657837	5:+12110509	MsaT025735.1:CDS
GGTATGAAGAGCAGAATGAG+TGG	0.672358	5:+12108618	MsaT025735.1:CDS
GGGTGGAACCGAAACCCTGG+TGG	0.689016	5:-12108264	None:intergenic
GGTGGAACCGAAACCCTGGT+GGG	0.689627	5:-12108263	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	12108240	12119308	12108240	ID=MsaG025735
Chr5	mRNA	12108240	12119308	12108240	ID=MsaT025735.1;Parent=MsaG025735
Chr5	exon	12108240	12108402	12108240	ID=MsaT025735.1.exon1;Parent=MsaT025735.1
Chr5	CDS	12108240	12108402	12108240	ID=cds.MsaT025735.1;Parent=MsaT025735.1
Chr5	exon	12108603	12108874	12108603	ID=MsaT025735.1.exon2;Parent=MsaT025735.1
Chr5	CDS	12108603	12108874	12108603	ID=cds.MsaT025735.1;Parent=MsaT025735.1
Chr5	exon	12110396	12110952	12110396	ID=MsaT025735.1.exon3;Parent=MsaT025735.1
Chr5	CDS	12110396	12110952	12110396	ID=cds.MsaT025735.1;Parent=MsaT025735.1
Chr5	exon	12119290	12119308	12119290	ID=MsaT025735.1.exon4;Parent=MsaT025735.1
Chr5	CDS	12119290	12119308	12119290	ID=cds.MsaT025735.1;Parent=MsaT025735.1

Gene Sequence

>MsaT025735.1

ATGGAGTCCATGGAGTCATGTGTCCCACCAGGGTTTCGGTTCCACCCAACTGATGAAGAACTTGTTGGCTATTATCTCAGAAAGAAAATTGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTTTATCGTATTGAACCATGGGATCTTCAAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTTTTCAGCCATAAAGATAAAAAGTATCCAACAGGGACAAGAACTAACAGAGCTACCATGGCTGGGTTTTGGAAAGCTACAGGAAGAGATAAAGCAGTTTATGATAAGATGAAACTAATTGGGATGAGGAAGACTCTAGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATAGGCTTGAATCTGATGAAAATGGACCTCCACAGGAGGAAGGATGGGTAGTGTGTAGAGCATTTAAGAAAAGAACAACAAACAGCCAAAGTACAAAAAGTACTATTGAAGGATGGGACACAAGCTACTTCTATGAAGAAGCTGCAAGTAGGGTCAACAATTCCATTGTGGATCCAATTGATCAACTAATCTCAAGGCAACCTCAAAGCTATTTATCCCAAAGTTATAACATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTTTGCAGCTTCCTCAGCTTGAAAGTCCTTCATTGCCATTAGTAAAGAGGCCAAGCACAATGTCTCTAGTATCGGACAATAATAACGATGACATTAACGACCAAAACAGGTTGCTATTATTATCGAACAACAACGATAATATTACTACAAATACAGTTACTGATTGGAGAGCTCTTGATAAGTTTGTGGCTTCTCAACTGAGTCATGAAGTTGAAACTGATCAAGGAGTGTTGTTGTCAAGTTTTGGAACAAATAATAACCCTAGCTCGGACATGGCATTGATGTTACTGCAGCAGGGTAATAGGGATGAAGAGAACAATTGGGTTAAGAATGATTAA

Protein sequence

>MsaT025735.1

MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQSTKSTIEGWDTSYFYEEAASRVNNSIVDPIDQLISRQPQSYLSQSYNMCKQEIEACMHAEQFLQLPQLESPSLPLVKRPSTMSLVSDNNNDDINDQNRLLLLSNNNDNITTNTVTDWRALDKFVASQLSHEVETDQGVLLSSFGTNNNPSSDMALMLLQQGNRDEENNWVKND*