Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG025901 | XP_003612390.1 | 98.341 | 904 | 15 | 0 | 1 | 904 | 1 | 904 | 0.0 | 1839 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG025901 | sp|Q9C5S2|IRE1A_ARATH | 68.539 | 445 | 127 | 3 | 468 | 901 | 395 | 837 | 0.0 | 640 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG025901 | tr|G7K1A9|G7K1A9_MEDTR | 98.341 | 904 | 15 | 0 | 1 | 904 | 1 | 904 | 0.0 | 1839 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000761 | MsaG025901 | 0.809380 | 3.323531e-50 | 5.591197e-48 |
MsaG002298 | MsaG025901 | 0.804061 | 4.362825e-49 | 6.472165e-47 |
MsaG025901 | MsaG046974 | 0.807987 | 6.572693e-50 | 1.069312e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG025901 | MtrunA17_Chr5g0407261 | 98.341 | 904 | 15 | 0 | 1 | 904 | 1 | 904 | 0.0 | 1839 |
MsaG025901 | MtrunA17_Chr8g0370241 | 58.381 | 877 | 275 | 15 | 49 | 900 | 33 | 844 | 0.0 | 956 |
MsaG025901 | MtrunA17_Chr8g0369971 | 40.851 | 705 | 279 | 23 | 65 | 756 | 36 | 615 | 2.06e-143 | 439 |
MsaG025901 | MtrunA17_Chr6g0477411 | 87.500 | 56 | 1 | 1 | 411 | 466 | 1 | 50 | 1.46e-22 | 93.2 |
MsaG025901 | MtrunA17_Chr6g0477411 | 72.917 | 48 | 9 | 1 | 631 | 674 | 42 | 89 | 2.68e-13 | 67.0 |
MsaG025901 | MtrunA17_Chr7g0272841 | 27.715 | 267 | 148 | 8 | 506 | 767 | 104 | 330 | 8.69e-19 | 91.7 |
MsaG025901 | MtrunA17_Chr1g0205931 | 26.316 | 266 | 151 | 8 | 507 | 767 | 92 | 317 | 4.21e-18 | 89.4 |
MsaG025901 | MtrunA17_Chr4g0033521 | 26.934 | 349 | 215 | 17 | 486 | 803 | 426 | 765 | 6.15e-17 | 86.3 |
MsaG025901 | MtrunA17_Chr8g0384301 | 29.213 | 267 | 140 | 11 | 521 | 782 | 347 | 569 | 1.63e-16 | 84.3 |
MsaG025901 | MtrunA17_Chr8g0346071 | 27.961 | 304 | 161 | 13 | 477 | 768 | 13 | 270 | 1.84e-16 | 83.2 |
MsaG025901 | MtrunA17_Chr3g0117731 | 25.352 | 284 | 176 | 10 | 483 | 763 | 58 | 308 | 2.99e-16 | 81.6 |
MsaG025901 | MtrunA17_Chr6g0474831 | 27.826 | 230 | 139 | 9 | 488 | 704 | 34 | 249 | 8.43e-16 | 79.3 |
MsaG025901 | MtrunA17_Chr5g0402551 | 26.629 | 353 | 192 | 14 | 435 | 766 | 88 | 394 | 8.50e-16 | 81.6 |
MsaG025901 | MtrunA17_Chr5g0419441 | 25.817 | 306 | 160 | 12 | 480 | 768 | 238 | 493 | 1.19e-15 | 81.6 |
MsaG025901 | MtrunA17_Chr0c02g0489761 | 27.832 | 309 | 153 | 13 | 484 | 772 | 80 | 338 | 1.89e-15 | 80.5 |
MsaG025901 | MtrunA17_Chr4g0001331 | 34.302 | 172 | 102 | 6 | 613 | 782 | 121 | 283 | 3.51e-15 | 79.3 |
MsaG025901 | MtrunA17_Chr4g0059121 | 33.750 | 160 | 96 | 5 | 607 | 763 | 157 | 309 | 3.68e-15 | 78.2 |
MsaG025901 | MtrunA17_Chr4g0041201 | 25.641 | 273 | 156 | 9 | 497 | 763 | 561 | 792 | 7.04e-15 | 79.3 |
MsaG025901 | MtrunA17_Chr4g0063881 | 29.703 | 303 | 159 | 14 | 476 | 768 | 6 | 264 | 7.90e-15 | 78.2 |
MsaG025901 | MtrunA17_Chr4g0042731 | 28.621 | 290 | 153 | 11 | 488 | 763 | 149 | 398 | 1.12e-14 | 77.4 |
MsaG025901 | MtrunA17_Chr4g0059751 | 34.932 | 146 | 77 | 6 | 617 | 756 | 202 | 335 | 1.20e-14 | 77.4 |
MsaG025901 | MtrunA17_Chr3g0090261 | 23.711 | 291 | 170 | 10 | 484 | 763 | 84 | 333 | 3.89e-14 | 75.1 |
MsaG025901 | MtrunA17_Chr8g0355131 | 27.027 | 333 | 181 | 12 | 442 | 766 | 26 | 304 | 4.29e-14 | 76.3 |
MsaG025901 | MtrunA17_Chr8g0386981 | 25.595 | 336 | 182 | 14 | 488 | 809 | 414 | 695 | 4.62e-14 | 76.6 |
MsaG025901 | MtrunA17_Chr8g0338501 | 31.541 | 279 | 127 | 15 | 439 | 705 | 519 | 745 | 4.79e-14 | 76.6 |
MsaG025901 | MtrunA17_Chr1g0197721 | 26.201 | 229 | 123 | 7 | 500 | 720 | 74 | 264 | 7.11e-14 | 75.5 |
MsaG025901 | MtrunA17_Chr8g0359691 | 30.357 | 224 | 112 | 12 | 487 | 703 | 669 | 855 | 8.66e-14 | 75.9 |
MsaG025901 | MtrunA17_Chr1g0206551 | 27.778 | 234 | 129 | 8 | 485 | 713 | 39 | 237 | 8.77e-14 | 73.9 |
MsaG025901 | MtrunA17_Chr7g0245031 | 33.152 | 184 | 98 | 9 | 617 | 784 | 254 | 428 | 9.01e-14 | 74.7 |
MsaG025901 | MtrunA17_Chr5g0423061 | 27.477 | 222 | 124 | 7 | 486 | 704 | 316 | 503 | 1.64e-13 | 74.7 |
MsaG025901 | MtrunA17_Chr1g0209391 | 27.232 | 224 | 123 | 7 | 485 | 704 | 303 | 490 | 2.18e-13 | 74.3 |
MsaG025901 | MtrunA17_Chr4g0049601 | 30.460 | 174 | 93 | 7 | 614 | 764 | 460 | 628 | 2.45e-13 | 73.9 |
MsaG025901 | MtrunA17_Chr1g0150321 | 32.000 | 200 | 123 | 7 | 606 | 803 | 107 | 295 | 2.62e-13 | 73.2 |
MsaG025901 | MtrunA17_Chr8g0376131 | 27.468 | 233 | 127 | 10 | 487 | 713 | 57 | 253 | 3.68e-13 | 72.4 |
MsaG025901 | MtrunA17_Chr2g0314821 | 28.326 | 233 | 124 | 10 | 487 | 713 | 669 | 864 | 3.68e-13 | 73.9 |
MsaG025901 | MtrunA17_Chr1g0206391 | 24.496 | 347 | 186 | 15 | 487 | 821 | 46 | 328 | 4.18e-13 | 72.0 |
MsaG025901 | MtrunA17_Chr5g0428571 | 27.239 | 268 | 150 | 10 | 487 | 745 | 304 | 535 | 4.90e-13 | 72.8 |
MsaG025901 | MtrunA17_Chr5g0428581 | 27.632 | 228 | 121 | 9 | 485 | 705 | 48 | 238 | 6.89e-13 | 71.2 |
MsaG025901 | MtrunA17_Chr2g0304111 | 26.829 | 246 | 123 | 9 | 533 | 768 | 80 | 278 | 7.19e-13 | 72.0 |
MsaG025901 | MtrunA17_Chr2g0333821 | 35.758 | 165 | 98 | 7 | 613 | 774 | 115 | 274 | 7.30e-13 | 72.0 |
MsaG025901 | MtrunA17_Chr5g0441691 | 26.797 | 306 | 160 | 13 | 484 | 772 | 70 | 328 | 7.84e-13 | 72.0 |
MsaG025901 | MtrunA17_Chr5g0424501 | 27.397 | 292 | 151 | 14 | 488 | 765 | 198 | 442 | 1.21e-12 | 71.2 |
MsaG025901 | MtrunA17_Chr2g0314841 | 27.897 | 233 | 125 | 10 | 487 | 713 | 666 | 861 | 1.66e-12 | 71.6 |
MsaG025901 | MtrunA17_Chr8g0338471 | 31.317 | 281 | 127 | 16 | 439 | 705 | 486 | 714 | 1.69e-12 | 71.6 |
MsaG025901 | MtrunA17_Chr8g0379931 | 25.581 | 301 | 162 | 12 | 487 | 764 | 715 | 976 | 1.80e-12 | 71.6 |
MsaG025901 | MtrunA17_Chr8g0358781 | 28.808 | 302 | 152 | 15 | 485 | 763 | 348 | 609 | 1.92e-12 | 71.2 |
MsaG025901 | MtrunA17_Chr2g0312571 | 27.376 | 263 | 144 | 12 | 487 | 736 | 51 | 279 | 1.97e-12 | 70.5 |
MsaG025901 | MtrunA17_Chr2g0286501 | 27.875 | 287 | 154 | 14 | 501 | 775 | 63 | 308 | 2.03e-12 | 71.6 |
MsaG025901 | MtrunA17_Chr2g0280691 | 28.405 | 257 | 139 | 10 | 484 | 733 | 529 | 747 | 2.58e-12 | 70.9 |
MsaG025901 | MtrunA17_Chr5g0443531 | 28.571 | 224 | 117 | 11 | 487 | 703 | 682 | 869 | 2.82e-12 | 70.9 |
MsaG025901 | MtrunA17_Chr2g0315081 | 25.368 | 272 | 147 | 10 | 484 | 745 | 656 | 881 | 3.43e-12 | 70.9 |
MsaG025901 | MtrunA17_Chr3g0129721 | 28.626 | 262 | 137 | 9 | 483 | 737 | 26 | 244 | 3.50e-12 | 68.2 |
MsaG025901 | MtrunA17_Chr5g0424651 | 27.397 | 292 | 151 | 14 | 488 | 765 | 327 | 571 | 3.85e-12 | 70.1 |
MsaG025901 | MtrunA17_Chr2g0299991 | 25.649 | 308 | 155 | 13 | 486 | 767 | 74 | 333 | 3.92e-12 | 68.9 |
MsaG025901 | MtrunA17_Chr2g0312561 | 26.033 | 242 | 136 | 9 | 484 | 719 | 45 | 249 | 4.18e-12 | 68.9 |
MsaG025901 | MtrunA17_Chr5g0424581 | 27.397 | 292 | 151 | 14 | 488 | 765 | 131 | 375 | 4.19e-12 | 69.3 |
MsaG025901 | MtrunA17_Chr1g0166101 | 34.104 | 173 | 97 | 7 | 606 | 771 | 120 | 282 | 4.49e-12 | 69.3 |
MsaG025901 | MtrunA17_Chr2g0326531 | 32.258 | 155 | 97 | 5 | 613 | 765 | 229 | 377 | 4.51e-12 | 68.9 |
MsaG025901 | MtrunA17_Chr4g0038501 | 26.910 | 301 | 168 | 13 | 483 | 774 | 21 | 278 | 5.15e-12 | 70.1 |
MsaG025901 | MtrunA17_Chr7g0226891 | 28.936 | 235 | 121 | 12 | 485 | 712 | 53 | 248 | 7.28e-12 | 68.2 |
MsaG025901 | MtrunA17_Chr5g0428521 | 27.315 | 216 | 117 | 8 | 504 | 714 | 23 | 203 | 7.39e-12 | 66.2 |
MsaG025901 | MtrunA17_Chr1g0172951 | 32.237 | 152 | 87 | 5 | 612 | 760 | 443 | 581 | 7.68e-12 | 69.3 |
MsaG025901 | MtrunA17_Chr3g0132591 | 34.940 | 166 | 91 | 8 | 615 | 772 | 210 | 366 | 9.40e-12 | 68.6 |
MsaG025901 | MtrunA17_Chr2g0288841 | 26.280 | 293 | 153 | 12 | 488 | 767 | 11 | 253 | 1.17e-11 | 68.2 |
MsaG025901 | MtrunA17_Chr8g0338531 | 32.051 | 234 | 110 | 12 | 484 | 705 | 453 | 649 | 1.22e-11 | 68.6 |
MsaG025901 | MtrunA17_Chr6g0450571 | 29.508 | 183 | 95 | 6 | 605 | 768 | 110 | 277 | 1.24e-11 | 68.6 |
MsaG025901 | MtrunA17_Chr5g0426941 | 27.313 | 227 | 123 | 10 | 485 | 705 | 343 | 533 | 1.30e-11 | 68.6 |
MsaG025901 | MtrunA17_Chr4g0000431 | 27.778 | 216 | 115 | 6 | 604 | 793 | 117 | 317 | 1.74e-11 | 68.2 |
MsaG025901 | MtrunA17_Chr8g0358911 | 26.360 | 239 | 133 | 9 | 487 | 719 | 51 | 252 | 1.86e-11 | 67.0 |
MsaG025901 | MtrunA17_Chr4g0038091 | 26.578 | 301 | 169 | 13 | 483 | 774 | 21 | 278 | 1.88e-11 | 68.6 |
MsaG025901 | MtrunA17_Chr2g0280711 | 26.506 | 249 | 139 | 9 | 487 | 728 | 536 | 747 | 1.90e-11 | 68.2 |
MsaG025901 | MtrunA17_Chr5g0433941 | 29.555 | 247 | 120 | 12 | 485 | 723 | 373 | 573 | 1.99e-11 | 67.8 |
MsaG025901 | MtrunA17_Chr3g0081031 | 28.017 | 232 | 124 | 10 | 487 | 712 | 358 | 552 | 2.23e-11 | 67.8 |
MsaG025901 | MtrunA17_Chr2g0314991 | 27.876 | 226 | 121 | 9 | 484 | 703 | 213 | 402 | 2.36e-11 | 68.2 |
MsaG025901 | MtrunA17_Chr4g0069301 | 25.758 | 264 | 152 | 9 | 533 | 793 | 83 | 305 | 3.09e-11 | 66.6 |
MsaG025901 | MtrunA17_Chr7g0260191 | 30.168 | 179 | 108 | 6 | 595 | 766 | 88 | 256 | 3.99e-11 | 67.0 |
MsaG025901 | MtrunA17_Chr2g0324471 | 27.004 | 237 | 130 | 11 | 488 | 718 | 375 | 574 | 4.76e-11 | 66.6 |
MsaG025901 | MtrunA17_Chr4g0023221 | 28.235 | 170 | 101 | 6 | 612 | 763 | 831 | 997 | 6.11e-11 | 66.6 |
MsaG025901 | MtrunA17_Chr2g0280791 | 28.017 | 232 | 124 | 9 | 487 | 712 | 527 | 721 | 6.96e-11 | 66.2 |
MsaG025901 | MtrunA17_Chr1g0180951 | 39.815 | 108 | 56 | 5 | 612 | 715 | 198 | 300 | 8.57e-11 | 65.1 |
MsaG025901 | MtrunA17_Chr2g0314911 | 26.106 | 226 | 125 | 8 | 484 | 703 | 664 | 853 | 8.77e-11 | 66.2 |
MsaG025901 | MtrunA17_Chr1g0213501 | 26.250 | 240 | 141 | 8 | 488 | 721 | 118 | 327 | 9.71e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG025901 | AT2G17520.1 | 68.539 | 445 | 127 | 3 | 468 | 901 | 395 | 837 | 0.0 | 640 |
MsaG025901 | AT5G24360.1 | 45.227 | 880 | 395 | 26 | 60 | 899 | 43 | 875 | 0.0 | 637 |
MsaG025901 | AT5G24360.2 | 44.937 | 879 | 397 | 25 | 61 | 899 | 50 | 881 | 0.0 | 634 |
MsaG025901 | AT5G24360.3 | 45.080 | 874 | 393 | 25 | 66 | 899 | 35 | 861 | 0.0 | 634 |
MsaG025901 | AT3G11870.1 | 43.016 | 451 | 211 | 14 | 480 | 900 | 119 | 553 | 5.87e-97 | 315 |
MsaG025901 | AT3G06030.1 | 28.788 | 264 | 144 | 8 | 508 | 767 | 106 | 329 | 1.03e-21 | 101 |
MsaG025901 | AT1G54960.1 | 25.405 | 370 | 194 | 15 | 488 | 841 | 74 | 377 | 8.93e-19 | 92.0 |
MsaG025901 | AT1G54960.2 | 25.405 | 370 | 194 | 15 | 488 | 841 | 74 | 377 | 8.93e-19 | 92.0 |
MsaG025901 | AT1G09000.2 | 27.027 | 296 | 160 | 10 | 488 | 767 | 75 | 330 | 1.25e-18 | 91.3 |
MsaG025901 | AT1G09000.1 | 27.027 | 296 | 160 | 10 | 488 | 767 | 75 | 330 | 2.05e-18 | 90.9 |
MsaG025901 | AT3G59410.4 | 27.019 | 322 | 201 | 13 | 486 | 779 | 430 | 745 | 3.36e-16 | 84.3 |
MsaG025901 | AT3G59410.5 | 27.019 | 322 | 201 | 13 | 486 | 779 | 429 | 744 | 3.47e-16 | 84.3 |
MsaG025901 | AT3G59410.2 | 27.019 | 322 | 201 | 13 | 486 | 779 | 453 | 768 | 3.50e-16 | 84.3 |
MsaG025901 | AT3G59410.1 | 27.019 | 322 | 201 | 13 | 486 | 779 | 429 | 744 | 3.53e-16 | 84.3 |
MsaG025901 | AT3G59410.3 | 27.019 | 322 | 201 | 13 | 486 | 779 | 429 | 744 | 3.53e-16 | 84.3 |
MsaG025901 | AT5G04510.2 | 26.007 | 273 | 150 | 9 | 510 | 768 | 77 | 311 | 3.75e-16 | 82.4 |
MsaG025901 | AT5G04510.1 | 26.007 | 273 | 150 | 9 | 510 | 768 | 77 | 311 | 4.40e-16 | 82.8 |
MsaG025901 | AT3G53930.2 | 27.795 | 331 | 178 | 13 | 474 | 789 | 13 | 297 | 6.95e-16 | 82.8 |
MsaG025901 | AT3G53930.1 | 27.795 | 331 | 178 | 13 | 474 | 789 | 13 | 297 | 7.00e-16 | 82.8 |
MsaG025901 | AT4G29810.1 | 27.632 | 304 | 152 | 13 | 486 | 768 | 74 | 330 | 2.13e-15 | 79.3 |
MsaG025901 | AT4G29810.2 | 27.632 | 304 | 152 | 13 | 486 | 768 | 83 | 339 | 2.56e-15 | 79.3 |
MsaG025901 | AT3G08720.1 | 32.512 | 203 | 113 | 9 | 617 | 804 | 246 | 439 | 3.64e-15 | 79.7 |
MsaG025901 | AT3G08720.3 | 32.512 | 203 | 113 | 9 | 617 | 804 | 246 | 439 | 3.64e-15 | 79.7 |
MsaG025901 | AT3G08720.4 | 32.512 | 203 | 113 | 9 | 617 | 804 | 246 | 439 | 3.64e-15 | 79.7 |
MsaG025901 | AT3G08720.2 | 32.512 | 203 | 113 | 9 | 617 | 804 | 246 | 439 | 3.64e-15 | 79.7 |
MsaG025901 | AT3G08730.1 | 33.333 | 183 | 98 | 9 | 617 | 784 | 240 | 413 | 7.96e-15 | 78.6 |
MsaG025901 | AT3G08730.2 | 33.333 | 183 | 98 | 9 | 617 | 784 | 240 | 413 | 7.96e-15 | 78.6 |
MsaG025901 | AT1G30270.1 | 27.572 | 243 | 125 | 8 | 533 | 768 | 88 | 286 | 8.35e-15 | 78.6 |
MsaG025901 | AT1G30270.2 | 27.572 | 243 | 125 | 8 | 533 | 768 | 88 | 286 | 8.74e-15 | 78.6 |
MsaG025901 | AT2G38490.1 | 35.838 | 173 | 95 | 7 | 603 | 768 | 119 | 282 | 2.10e-14 | 77.0 |
MsaG025901 | AT2G34290.1 | 29.518 | 166 | 109 | 5 | 607 | 768 | 103 | 264 | 2.37e-14 | 74.7 |
MsaG025901 | AT4G30960.1 | 32.335 | 167 | 97 | 6 | 615 | 774 | 127 | 284 | 3.84e-14 | 76.3 |
MsaG025901 | AT5G66210.6 | 28.276 | 290 | 137 | 16 | 504 | 772 | 85 | 324 | 6.22e-14 | 75.5 |
MsaG025901 | AT5G66210.4 | 28.276 | 290 | 137 | 16 | 504 | 772 | 85 | 324 | 6.22e-14 | 75.5 |
MsaG025901 | AT1G29730.1 | 32.599 | 227 | 107 | 13 | 484 | 703 | 643 | 830 | 7.67e-14 | 76.6 |
MsaG025901 | AT2G05060.1 | 25.680 | 331 | 198 | 10 | 477 | 799 | 9 | 299 | 7.74e-14 | 73.9 |
MsaG025901 | AT5G66210.5 | 29.021 | 286 | 140 | 16 | 504 | 772 | 85 | 324 | 8.78e-14 | 75.5 |
MsaG025901 | AT5G66210.3 | 29.720 | 286 | 138 | 16 | 504 | 772 | 85 | 324 | 8.88e-14 | 75.5 |
MsaG025901 | AT5G27790.1 | 28.191 | 188 | 122 | 5 | 607 | 784 | 122 | 306 | 9.31e-14 | 73.9 |
MsaG025901 | AT1G29730.4 | 32.599 | 227 | 107 | 13 | 484 | 703 | 643 | 830 | 1.36e-13 | 75.5 |
MsaG025901 | AT5G66210.1 | 29.021 | 286 | 140 | 16 | 504 | 772 | 85 | 324 | 1.45e-13 | 74.7 |
MsaG025901 | AT5G66210.2 | 29.021 | 286 | 140 | 16 | 504 | 772 | 85 | 324 | 1.45e-13 | 74.7 |
MsaG025901 | AT1G51660.1 | 28.704 | 216 | 136 | 7 | 564 | 768 | 126 | 334 | 1.47e-13 | 73.9 |
MsaG025901 | AT1G53440.1 | 27.928 | 222 | 120 | 7 | 487 | 703 | 672 | 858 | 1.49e-13 | 75.5 |
MsaG025901 | AT2G42640.1 | 22.968 | 283 | 169 | 10 | 488 | 765 | 534 | 772 | 1.54e-13 | 75.5 |
MsaG025901 | AT1G30270.3 | 33.129 | 163 | 93 | 6 | 613 | 768 | 36 | 189 | 1.77e-13 | 73.9 |
MsaG025901 | AT2G42640.4 | 22.968 | 283 | 169 | 10 | 488 | 765 | 496 | 734 | 1.88e-13 | 75.1 |
MsaG025901 | AT5G24430.1 | 26.048 | 334 | 185 | 11 | 467 | 782 | 128 | 417 | 2.00e-13 | 74.7 |
MsaG025901 | AT4G04695.1 | 25.890 | 309 | 177 | 12 | 478 | 772 | 24 | 294 | 2.06e-13 | 74.3 |
MsaG025901 | AT3G45240.2 | 34.524 | 168 | 98 | 8 | 613 | 776 | 218 | 377 | 2.26e-13 | 73.6 |
MsaG025901 | AT3G45240.1 | 34.524 | 168 | 98 | 8 | 613 | 776 | 218 | 377 | 2.26e-13 | 73.6 |
MsaG025901 | AT1G29730.2 | 31.718 | 227 | 108 | 13 | 484 | 703 | 676 | 862 | 2.26e-13 | 75.1 |
MsaG025901 | AT1G29730.3 | 33.480 | 227 | 104 | 13 | 484 | 703 | 676 | 862 | 3.35e-13 | 74.3 |
MsaG025901 | AT4G29810.3 | 28.094 | 299 | 147 | 14 | 486 | 763 | 83 | 334 | 3.39e-13 | 72.4 |
MsaG025901 | AT5G45820.1 | 32.515 | 163 | 94 | 6 | 613 | 768 | 113 | 266 | 5.32e-13 | 72.8 |
MsaG025901 | AT4G28350.1 | 26.490 | 302 | 158 | 12 | 488 | 764 | 355 | 617 | 6.89e-13 | 73.2 |
MsaG025901 | AT5G21326.1 | 27.687 | 307 | 162 | 12 | 476 | 768 | 8 | 268 | 8.80e-13 | 72.0 |
MsaG025901 | AT2G30360.1 | 26.568 | 271 | 144 | 9 | 533 | 796 | 79 | 301 | 9.20e-13 | 72.0 |
MsaG025901 | AT5G60550.1 | 30.726 | 179 | 110 | 6 | 596 | 766 | 196 | 368 | 1.02e-12 | 71.6 |
MsaG025901 | AT4G14580.1 | 33.918 | 171 | 96 | 8 | 613 | 776 | 124 | 284 | 1.53e-12 | 71.2 |
MsaG025901 | AT3G13530.1 | 27.152 | 302 | 170 | 12 | 483 | 775 | 21 | 281 | 1.71e-12 | 72.4 |
MsaG025901 | AT4G21390.2 | 24.100 | 361 | 216 | 14 | 366 | 713 | 415 | 730 | 2.11e-12 | 71.6 |
MsaG025901 | AT4G21390.1 | 24.100 | 361 | 216 | 14 | 366 | 713 | 415 | 730 | 2.16e-12 | 71.6 |
MsaG025901 | AT5G56580.1 | 30.588 | 170 | 101 | 6 | 609 | 767 | 167 | 330 | 2.18e-12 | 70.1 |
MsaG025901 | AT5G14720.1 | 29.348 | 184 | 96 | 6 | 604 | 768 | 109 | 277 | 3.59e-12 | 70.9 |
MsaG025901 | AT5G14720.2 | 29.348 | 184 | 96 | 6 | 604 | 768 | 109 | 277 | 3.59e-12 | 70.9 |
MsaG025901 | AT3G45240.3 | 34.524 | 168 | 95 | 9 | 613 | 776 | 218 | 374 | 3.70e-12 | 69.7 |
MsaG025901 | AT1G56120.3 | 29.630 | 243 | 126 | 10 | 484 | 720 | 546 | 749 | 4.18e-12 | 70.9 |
MsaG025901 | AT2G41930.1 | 32.164 | 171 | 104 | 6 | 616 | 776 | 116 | 284 | 4.23e-12 | 69.3 |
MsaG025901 | AT5G55090.1 | 29.518 | 166 | 104 | 5 | 607 | 768 | 100 | 256 | 4.52e-12 | 69.7 |
MsaG025901 | AT1G56120.1 | 28.807 | 243 | 128 | 10 | 484 | 720 | 712 | 915 | 5.21e-12 | 70.5 |
MsaG025901 | AT1G56120.2 | 29.630 | 243 | 126 | 10 | 484 | 720 | 694 | 897 | 5.93e-12 | 70.5 |
MsaG025901 | AT2G25090.1 | 32.571 | 175 | 97 | 7 | 607 | 768 | 112 | 278 | 7.08e-12 | 69.3 |
MsaG025901 | AT5G55090.2 | 29.697 | 165 | 103 | 5 | 607 | 767 | 162 | 317 | 7.40e-12 | 69.3 |
MsaG025901 | AT4G31170.7 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.6 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.5 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.1 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.2 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.3 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT4G31170.8 | 24.407 | 295 | 165 | 11 | 484 | 764 | 133 | 383 | 7.45e-12 | 68.9 |
MsaG025901 | AT2G17890.1 | 26.557 | 305 | 166 | 15 | 483 | 772 | 109 | 370 | 8.98e-12 | 69.3 |
MsaG025901 | AT3G07980.2 | 26.246 | 301 | 174 | 11 | 483 | 775 | 21 | 281 | 1.07e-11 | 69.7 |
MsaG025901 | AT3G54180.1 | 28.723 | 188 | 101 | 7 | 610 | 768 | 118 | 301 | 1.07e-11 | 67.4 |
MsaG025901 | AT4G21380.1 | 25.000 | 344 | 195 | 12 | 396 | 726 | 447 | 740 | 1.12e-11 | 69.3 |
MsaG025901 | AT3G49370.1 | 25.552 | 317 | 174 | 12 | 484 | 782 | 144 | 416 | 1.20e-11 | 68.9 |
MsaG025901 | AT3G07980.1 | 26.246 | 301 | 174 | 11 | 483 | 775 | 21 | 281 | 1.27e-11 | 69.3 |
MsaG025901 | AT2G41910.1 | 30.000 | 190 | 108 | 8 | 607 | 785 | 108 | 283 | 1.48e-11 | 67.8 |
MsaG025901 | AT4G01330.1 | 27.385 | 325 | 168 | 17 | 481 | 776 | 162 | 447 | 1.69e-11 | 68.2 |
MsaG025901 | AT1G29740.2 | 29.956 | 227 | 112 | 12 | 484 | 703 | 680 | 866 | 1.94e-11 | 68.6 |
MsaG025901 | AT5G18700.1 | 27.986 | 293 | 142 | 14 | 501 | 775 | 18 | 259 | 2.19e-11 | 68.6 |
MsaG025901 | AT1G29740.1 | 29.956 | 227 | 112 | 12 | 484 | 703 | 680 | 866 | 2.26e-11 | 68.6 |
MsaG025901 | AT2G47060.6 | 36.585 | 123 | 66 | 5 | 607 | 721 | 50 | 168 | 2.38e-11 | 65.5 |
MsaG025901 | AT1G79620.1 | 27.344 | 256 | 140 | 12 | 484 | 731 | 640 | 857 | 2.62e-11 | 68.2 |
MsaG025901 | AT1G70130.1 | 37.273 | 110 | 61 | 4 | 612 | 718 | 434 | 538 | 2.74e-11 | 67.8 |
MsaG025901 | AT1G79620.5 | 27.344 | 256 | 140 | 12 | 484 | 731 | 666 | 883 | 2.76e-11 | 68.2 |
MsaG025901 | AT1G16670.1 | 28.033 | 239 | 131 | 10 | 487 | 719 | 46 | 249 | 2.80e-11 | 67.0 |
MsaG025901 | AT1G70530.1 | 25.751 | 233 | 130 | 9 | 487 | 713 | 328 | 523 | 3.05e-11 | 67.8 |
MsaG025901 | AT2G38620.4 | 31.200 | 125 | 74 | 5 | 585 | 704 | 32 | 149 | 4.01e-11 | 64.7 |
MsaG025901 | AT2G47060.5 | 36.585 | 123 | 66 | 5 | 607 | 721 | 168 | 286 | 4.15e-11 | 65.9 |
MsaG025901 | AT2G39110.2 | 29.851 | 201 | 121 | 8 | 559 | 755 | 136 | 320 | 4.16e-11 | 66.6 |
MsaG025901 | AT2G39110.1 | 29.851 | 201 | 121 | 8 | 559 | 755 | 151 | 335 | 4.52e-11 | 66.6 |
MsaG025901 | AT4G01330.3 | 27.500 | 320 | 164 | 16 | 488 | 782 | 168 | 444 | 4.71e-11 | 66.6 |
MsaG025901 | AT3G21220.2 | 25.839 | 298 | 158 | 15 | 487 | 768 | 75 | 325 | 5.03e-11 | 65.9 |
MsaG025901 | AT3G21220.1 | 25.839 | 298 | 158 | 15 | 487 | 768 | 75 | 325 | 5.03e-11 | 65.9 |
MsaG025901 | AT2G47060.3 | 36.585 | 123 | 66 | 5 | 607 | 721 | 69 | 187 | 5.16e-11 | 64.7 |
MsaG025901 | AT2G42550.1 | 29.762 | 168 | 114 | 4 | 601 | 765 | 105 | 271 | 5.21e-11 | 65.9 |
MsaG025901 | AT4G01330.2 | 27.508 | 309 | 160 | 16 | 481 | 764 | 162 | 431 | 5.34e-11 | 66.6 |
MsaG025901 | AT1G29750.2 | 25.745 | 369 | 195 | 16 | 487 | 844 | 686 | 986 | 5.51e-11 | 67.4 |
MsaG025901 | AT4G26070.4 | 34.031 | 191 | 106 | 9 | 600 | 776 | 154 | 338 | 6.28e-11 | 65.5 |
MsaG025901 | AT2G28940.1 | 32.597 | 181 | 93 | 8 | 607 | 763 | 90 | 265 | 6.36e-11 | 65.5 |
MsaG025901 | AT2G28940.2 | 32.597 | 181 | 93 | 8 | 607 | 763 | 209 | 384 | 6.37e-11 | 66.2 |
MsaG025901 | AT1G29750.1 | 25.745 | 369 | 195 | 16 | 487 | 844 | 671 | 971 | 6.38e-11 | 67.0 |
MsaG025901 | AT4G26070.5 | 34.031 | 191 | 106 | 9 | 600 | 776 | 142 | 326 | 6.85e-11 | 65.5 |
MsaG025901 | AT2G47060.2 | 36.585 | 123 | 66 | 5 | 607 | 721 | 168 | 286 | 7.08e-11 | 65.5 |
MsaG025901 | AT2G47060.1 | 36.585 | 123 | 66 | 5 | 607 | 721 | 168 | 286 | 7.08e-11 | 65.5 |
MsaG025901 | AT4G26070.2 | 34.031 | 191 | 106 | 9 | 600 | 776 | 155 | 339 | 7.77e-11 | 65.5 |
MsaG025901 | AT4G26070.3 | 34.031 | 191 | 106 | 9 | 600 | 776 | 155 | 339 | 7.77e-11 | 65.5 |
MsaG025901 | AT4G26890.1 | 30.120 | 166 | 101 | 5 | 607 | 768 | 99 | 253 | 7.89e-11 | 65.9 |
MsaG025901 | AT1G70530.2 | 25.751 | 233 | 130 | 9 | 487 | 713 | 328 | 523 | 8.01e-11 | 66.2 |
MsaG025901 | AT2G47060.4 | 36.585 | 123 | 66 | 5 | 607 | 721 | 168 | 286 | 8.10e-11 | 65.5 |
MsaG025901 | AT2G34180.1 | 30.061 | 163 | 98 | 6 | 613 | 768 | 158 | 311 | 9.32e-11 | 65.9 |
Find 199 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCACAGGGATGTGGTTTC+TGG | 0.048891 | 5:+14193701 | MsaT025901.1:intron |
CCTTGATTAACAAAACATTT+TGG | 0.102471 | 5:-14193772 | None:intergenic |
TATTGCATCATCCTCTATTT+TGG | 0.157470 | 5:+14195492 | MsaT025901.1:CDS |
CATCCTTCTGTGCCTCTATT+TGG | 0.161498 | 5:-14192836 | None:intergenic |
CCATACCATCGAACAATATT+TGG | 0.183296 | 5:-14192672 | None:intergenic |
ATGTGCCAAACTTTCTGATA+TGG | 0.210133 | 5:+14193805 | MsaT025901.1:CDS |
TATCTTGTTGAAAGTGCTTC+TGG | 0.224454 | 5:+14190492 | MsaT025901.1:CDS |
CACTGGCTTTAGGTGCAAAA+TGG | 0.234573 | 5:+14195621 | MsaT025901.1:CDS |
CAAGAAGAAACCTGAATTTC+TGG | 0.245839 | 5:-14195767 | None:intergenic |
TGAATTGTCAATGTCATTAT+TGG | 0.250222 | 5:+14192254 | MsaT025901.1:CDS |
AGCGCCAGAGCAGCTTCTTC+AGG | 0.253007 | 5:+14194253 | MsaT025901.1:CDS |
TTGCCAACATTGGTCGTTAC+AGG | 0.255444 | 5:+14195669 | MsaT025901.1:CDS |
AGTCAGAAGCAATGAGGTTT+TGG | 0.260881 | 5:-14192644 | None:intergenic |
GGAATTGCCTCCAGAAATTC+AGG | 0.269943 | 5:+14195757 | MsaT025901.1:CDS |
GTGCTTCTGGGAGGGTAATT+TGG | 0.274259 | 5:+14190505 | MsaT025901.1:CDS |
TTGCACTATAATAATGTTAA+TGG | 0.278446 | 5:+14192474 | MsaT025901.1:CDS |
ATCCTTCTGTGCCTCTATTT+GGG | 0.283774 | 5:-14192835 | None:intergenic |
TTCAAATACAGTGCTCCTTT+TGG | 0.285333 | 5:-14191530 | None:intergenic |
GCCAATACTCCTCCGTCTTC+TGG | 0.291254 | 5:+14190564 | MsaT025901.1:CDS |
CTTGAAGACATGTCTTCTTT+AGG | 0.296981 | 5:+14193845 | MsaT025901.1:CDS |
CAGCAGCACCATAGCTTCTA+AGG | 0.306346 | 5:-14191576 | None:intergenic |
CAATCTGTGGGTCCTGGTTC+AGG | 0.308571 | 5:+14191757 | MsaT025901.1:CDS |
TCTGGTAAATTAAGCTTTGC+TGG | 0.311021 | 5:-14191697 | None:intergenic |
TCAAATCTGAGTCACTGATT+TGG | 0.321448 | 5:-14192347 | None:intergenic |
CGACTTCCGTGCAAATAATA+AGG | 0.322120 | 5:+14191663 | MsaT025901.1:CDS |
AATAATCAGTCCTAACTATC+TGG | 0.327755 | 5:-14191729 | None:intergenic |
TTGGGATTGGGTGGTGGAGA+TGG | 0.338443 | 5:-14190337 | None:intergenic |
TTTGCAGGCTGTGGCAGTTC+GGG | 0.343692 | 5:+14194224 | MsaT025901.1:intron |
ATCACAGGGATGTGGTTTCT+GGG | 0.350735 | 5:+14193702 | MsaT025901.1:intron |
AAGAGAGAGTTGTTGGGATT+GGG | 0.358908 | 5:-14190349 | None:intergenic |
GAAATTAGATCCTCTGCTTC+AGG | 0.359545 | 5:-14194425 | None:intergenic |
AATCCCCATATCAGAAAGTT+TGG | 0.368474 | 5:-14193810 | None:intergenic |
TGCTGTCAAACGTCTTGTTC+AGG | 0.374660 | 5:+14192593 | MsaT025901.1:CDS |
ATTTGCAGGCTGTGGCAGTT+CGG | 0.379266 | 5:+14194223 | MsaT025901.1:intron |
TAAACCCTGACCCCAATCTA+AGG | 0.380736 | 5:+14194456 | MsaT025901.1:CDS |
TGTGCCAAACTTTCTGATAT+GGG | 0.386739 | 5:+14193806 | MsaT025901.1:CDS |
AGCACTGCTCCACTGGCTTT+AGG | 0.386884 | 5:+14195611 | MsaT025901.1:CDS |
AGGATGATATGCAATGTCTT+TGG | 0.391060 | 5:+14192853 | MsaT025901.1:CDS |
TGTACTCACCAGTAGAACTA+TGG | 0.395638 | 5:-14193868 | None:intergenic |
TCTTTAGGCCATAGTTCTAC+TGG | 0.397728 | 5:+14193860 | MsaT025901.1:CDS |
CCAGCCACCAGTGCCGTAAC+AGG | 0.398229 | 5:-14190453 | None:intergenic |
GCCGTTAGTTTCGAATTCAT+TGG | 0.398371 | 5:+14190422 | MsaT025901.1:CDS |
CTCATCAACTTTAGTAAAAG+TGG | 0.398970 | 5:-14192897 | None:intergenic |
GAAGAGAGAGTTGTTGGGAT+TGG | 0.399708 | 5:-14190350 | None:intergenic |
GGGAGAAATCTATCACTCTT+AGG | 0.405694 | 5:-14192081 | None:intergenic |
TGGAAGCATCAGCTTTAAAT+CGG | 0.409181 | 5:-14192052 | None:intergenic |
CGCTCAAGACGCTCTCCAAA+TGG | 0.409235 | 5:-14194350 | None:intergenic |
CCAAATATTGTTCGATGGTA+TGG | 0.409739 | 5:+14192672 | MsaT025901.1:CDS |
TGCAATACTTCAATCGCCTT+TGG | 0.414925 | 5:-14195476 | None:intergenic |
GCTGTAGATTTGTTTAGTTT+AGG | 0.415194 | 5:+14194290 | MsaT025901.1:CDS |
GGTGGAAGAGCGGGAGGAGA+GGG | 0.416619 | 5:-14190390 | None:intergenic |
CGTCCCTGAAGAAGCTGCTC+TGG | 0.418016 | 5:-14194257 | None:intergenic |
ATCTTGTTGAAAGTGCTTCT+GGG | 0.421491 | 5:+14190493 | MsaT025901.1:CDS |
TTATTCCTAGTTCATGCAAA+TGG | 0.423327 | 5:-14193730 | None:intergenic |
TCATTGAATCCTTCCGGAAC+AGG | 0.425832 | 5:-14196105 | None:intergenic |
AAGTAGTCATTGAATCCTTC+CGG | 0.429425 | 5:-14196111 | None:intergenic |
GGAACTGATAGGACCTGTTC+CGG | 0.436582 | 5:+14196092 | MsaT025901.1:intron |
TGCATTACCATTACTATCAT+AGG | 0.440736 | 5:-14192166 | None:intergenic |
CAAACAGAAAATTCTTTCGT+TGG | 0.441930 | 5:-14191963 | None:intergenic |
CAAGGGAAGTTGATCTGAGC+AGG | 0.442572 | 5:+14192226 | MsaT025901.1:CDS |
GAGAATGACATACCTTAGAT+TGG | 0.442945 | 5:-14194468 | None:intergenic |
GACCTTCATATATCCCTTCA+AGG | 0.444624 | 5:-14192563 | None:intergenic |
ACAAATCTACAGCCCGTGTT+TGG | 0.446120 | 5:-14194280 | None:intergenic |
AGAATGACATACCTTAGATT+GGG | 0.447622 | 5:-14194467 | None:intergenic |
TGCAAAATGGGACGAAAAGA+TGG | 0.452150 | 5:+14195634 | MsaT025901.1:CDS |
GAGTTGTTGGGATTGGGTGG+TGG | 0.452797 | 5:-14190343 | None:intergenic |
ATCAGCTTTAAATCGGGCAT+TGG | 0.453000 | 5:-14192045 | None:intergenic |
ACCAGAAGACGGAGGAGTAT+TGG | 0.457722 | 5:-14190565 | None:intergenic |
TTTGAAGTGGATGCTAAAAC+AGG | 0.459175 | 5:+14191547 | MsaT025901.1:CDS |
ATCTTTCATGATCCCCACTT+TGG | 0.459310 | 5:+14190618 | MsaT025901.1:CDS |
CCTGTTACGGCACTGGTGGC+TGG | 0.460610 | 5:+14190453 | MsaT025901.1:CDS |
TCAGCTTTAAATCGGGCATT+GGG | 0.460946 | 5:-14192044 | None:intergenic |
GCGCCAGAGCAGCTTCTTCA+GGG | 0.464230 | 5:+14194254 | MsaT025901.1:CDS |
TGTGGAGAAGAGAGAGTTGT+TGG | 0.464412 | 5:-14190356 | None:intergenic |
TTATTGAATGTGGTGATGAC+TGG | 0.466806 | 5:+14190589 | MsaT025901.1:CDS |
ACATACCTTAGATTGGGGTC+AGG | 0.467825 | 5:-14194461 | None:intergenic |
CCTTGGTGCAGTGATCTCCA+TGG | 0.468092 | 5:-14192208 | None:intergenic |
CTTGTCCATTTGCATGAACT+AGG | 0.476007 | 5:+14193725 | MsaT025901.1:CDS |
ATTAGAGAGCACTGCTCCAC+TGG | 0.476795 | 5:+14195604 | MsaT025901.1:CDS |
GACGATGACGGTGGAAGAGC+GGG | 0.477305 | 5:-14190399 | None:intergenic |
CTGGTTTATCAGGAACTGAT+AGG | 0.478342 | 5:+14196081 | MsaT025901.1:intron |
GTGGAGAAGAGAGAGTTGTT+GGG | 0.481274 | 5:-14190355 | None:intergenic |
TGATCCCCACTTTGGTAAAA+CGG | 0.481566 | 5:+14190626 | MsaT025901.1:CDS |
CTGCTCAGATCAACTTCCCT+TGG | 0.482122 | 5:-14192225 | None:intergenic |
GCTCCATCTTTCGACACAAT+AGG | 0.482665 | 5:-14191493 | None:intergenic |
CAGGCTGTGGCAGTTCGGGT+TGG | 0.484799 | 5:+14194228 | MsaT025901.1:intron |
CGGTGGAAGAGCGGGAGGAG+AGG | 0.487007 | 5:-14190391 | None:intergenic |
CATCATATTACCACCATGAC+CGG | 0.489087 | 5:-14192103 | None:intergenic |
ACAGCAGGAAGACATCCATT+TGG | 0.490940 | 5:+14194335 | MsaT025901.1:CDS |
ACGCCTATTGTGTCGAAAGA+TGG | 0.491151 | 5:+14191490 | MsaT025901.1:CDS |
ATCTCAGAACTCCAAAATAG+AGG | 0.492786 | 5:-14195503 | None:intergenic |
ACTGGCTTTAGGTGCAAAAT+GGG | 0.494715 | 5:+14195622 | MsaT025901.1:CDS |
TTCTTCAGGGACGCCAAACA+CGG | 0.496323 | 5:+14194267 | MsaT025901.1:CDS |
AATGGCACCATTGTCCTTGA+AGG | 0.500351 | 5:+14192549 | MsaT025901.1:CDS |
GGAGAATATACGAATTCATA+AGG | 0.500634 | 5:+14192431 | MsaT025901.1:CDS |
AAAGATGGAGCTGTTATACT+TGG | 0.504620 | 5:+14191505 | MsaT025901.1:CDS |
GAAGAAGATGAAGATTGAAA+CGG | 0.505506 | 5:-14190277 | None:intergenic |
CTATCACTCTTAGGTTGTGA+TGG | 0.506586 | 5:-14192072 | None:intergenic |
CAGAAAACCTGTTACGGCAC+TGG | 0.509659 | 5:+14190446 | MsaT025901.1:CDS |
ACAGCGTCCGAGACTTGTTG+AGG | 0.510213 | 5:+14195705 | MsaT025901.1:CDS |
GGATACATCTGCAACGATGC+AGG | 0.510343 | 5:-14190316 | None:intergenic |
CCAGCTTTCATTGCCAACAT+TGG | 0.511232 | 5:+14195659 | MsaT025901.1:CDS |
CCAATGTTGGCAATGAAAGC+TGG | 0.511372 | 5:-14195659 | None:intergenic |
CTGGTTCAGGAATAGTGTTA+TGG | 0.511777 | 5:+14191770 | MsaT025901.1:CDS |
GGAAAGCTCCTTAGAAGCTA+TGG | 0.513931 | 5:+14191568 | MsaT025901.1:CDS |
TTCAGATTTGTCAGAAAACT+CGG | 0.515086 | 5:+14192773 | MsaT025901.1:CDS |
GGAGCGTTGTGCATGCAACT+TGG | 0.515887 | 5:+14192731 | MsaT025901.1:CDS |
TATATTGCATCACAGGGATG+TGG | 0.518474 | 5:+14193694 | MsaT025901.1:intron |
ACTTTGCAAGTCGATTTCCT+AGG | 0.520525 | 5:+14196130 | MsaT025901.1:CDS |
TTAAATAAAGAAATCGCAAA+GGG | 0.522398 | 5:+14192522 | MsaT025901.1:CDS |
ATTGGACAGAAAACCTGTTA+CGG | 0.523174 | 5:+14190440 | MsaT025901.1:CDS |
CATACCTTAGATTGGGGTCA+GGG | 0.524041 | 5:-14194460 | None:intergenic |
GATAGATTTCTCCCCGGTCA+TGG | 0.524362 | 5:+14192090 | MsaT025901.1:CDS |
AACTTTAGTAAAAGTGGAGA+TGG | 0.524497 | 5:-14192891 | None:intergenic |
ATCATATTACCACCATGACC+GGG | 0.528935 | 5:-14192102 | None:intergenic |
ATATAATTTGGCACAGGCAC+AGG | 0.528971 | 5:-14192129 | None:intergenic |
TTCATCCAAATATTGTTCGA+TGG | 0.531830 | 5:+14192667 | MsaT025901.1:CDS |
GGCTGCATATAATTTGGCAC+AGG | 0.532445 | 5:-14192135 | None:intergenic |
CTGTTATACTTGGATCCAAA+AGG | 0.532478 | 5:+14191515 | MsaT025901.1:CDS |
CTTGGTGCAGTGATCTCCAT+GGG | 0.533813 | 5:-14192207 | None:intergenic |
GAAATCGCAAAGGGAAGTAA+TGG | 0.534963 | 5:+14192531 | MsaT025901.1:CDS |
GTTGATGCTTATCAAGAGAA+AGG | 0.535298 | 5:+14192015 | MsaT025901.1:CDS |
TCATTTAATTGTCAGGCCAA+AGG | 0.535570 | 5:+14195460 | MsaT025901.1:intron |
GGCCCAAATAGAGGCACAGA+AGG | 0.535622 | 5:+14192833 | MsaT025901.1:CDS |
GCACTGGTGGCTGGTTTAGA+CGG | 0.536256 | 5:+14190462 | MsaT025901.1:CDS |
GTGATCTCCATGGGAGGCTG+CGG | 0.539014 | 5:-14192198 | None:intergenic |
GTGCCAAACTTTCTGATATG+GGG | 0.540780 | 5:+14193807 | MsaT025901.1:CDS |
AGAGAGTTGTTGGGATTGGG+TGG | 0.544234 | 5:-14190346 | None:intergenic |
TGCATCAAGTGAAGCTGTCA+AGG | 0.545531 | 5:-14191851 | None:intergenic |
AATGTTAATGGACGCAGGAT+CGG | 0.546974 | 5:+14192486 | MsaT025901.1:CDS |
CAAGCTCCTTATTATTTGCA+CGG | 0.551838 | 5:-14191669 | None:intergenic |
TCATGACCCTCAACAAGTCT+CGG | 0.551931 | 5:-14195712 | None:intergenic |
GGAAGCATCAGCTTTAAATC+GGG | 0.552574 | 5:-14192051 | None:intergenic |
CAATGTCTTTGGAAATCGAA+TGG | 0.553385 | 5:+14192864 | MsaT025901.1:CDS |
GTCCTTGAAGGGATATATGA+AGG | 0.553647 | 5:+14192561 | MsaT025901.1:CDS |
AAAATCACCTATGATAGTAA+TGG | 0.555445 | 5:+14192159 | MsaT025901.1:CDS |
TCTTCAGGGACGCCAAACAC+GGG | 0.556320 | 5:+14194268 | MsaT025901.1:CDS |
ATTATTGGTTGTATTATCTG+TGG | 0.560576 | 5:+14192269 | MsaT025901.1:CDS |
AGAGTTTCTTCCTGAAGCAG+AGG | 0.562454 | 5:+14194415 | MsaT025901.1:CDS |
TATGCTTCCGCAGCCTCCCA+TGG | 0.564293 | 5:+14192191 | MsaT025901.1:CDS |
TCATAAGGAAGCAGAAAATG+AGG | 0.565601 | 5:+14192446 | MsaT025901.1:CDS |
TTATGATGTTGACAGTGGCT+TGG | 0.565769 | 5:+14191888 | MsaT025901.1:CDS |
TACACTTCAATCAAGAGCCT+AGG | 0.567714 | 5:-14196147 | None:intergenic |
AAGGAGCACTGTATTTGAAG+TGG | 0.567852 | 5:+14191534 | MsaT025901.1:CDS |
AGACGGAGGAGTATTGGCAG+AGG | 0.569421 | 5:-14190559 | None:intergenic |
ACAGCTTCACTTGATGCAGA+AGG | 0.569623 | 5:+14191856 | MsaT025901.1:CDS |
TTGAAACCTGCAGAGACTCA+AGG | 0.571885 | 5:+14191441 | MsaT025901.1:intron |
TGTTGAAAGTGCTTCTGGGA+GGG | 0.574803 | 5:+14190497 | MsaT025901.1:CDS |
TTTCTGTCAGGACACGCATA+CGG | 0.575186 | 5:-14191922 | None:intergenic |
CAGCGTCCGAGACTTGTTGA+GGG | 0.579276 | 5:+14195706 | MsaT025901.1:CDS |
TCGCCTGTAACGACCAATGT+TGG | 0.582138 | 5:-14195672 | None:intergenic |
GAGGAGTATTGGCAGAGGAA+TGG | 0.586760 | 5:-14190554 | None:intergenic |
TATTGAATGTGGTGATGACT+GGG | 0.590060 | 5:+14190590 | MsaT025901.1:CDS |
CATAACACTATTCCTGAACC+AGG | 0.594376 | 5:-14191769 | None:intergenic |
TCAAGTGAAGCTGTCAAGGT+AGG | 0.598978 | 5:-14191847 | None:intergenic |
CGACGATGACGGTGGAAGAG+CGG | 0.602144 | 5:-14190400 | None:intergenic |
TCTTCTGGTCTTATTGAATG+TGG | 0.602348 | 5:+14190579 | MsaT025901.1:CDS |
ATGGCACCATTGTCCTTGAA+GGG | 0.603709 | 5:+14192550 | MsaT025901.1:CDS |
CATGGAGATCACTGCACCAA+GGG | 0.603861 | 5:+14192209 | MsaT025901.1:CDS |
TATGTCAGTAGCTGAATTTG+AGG | 0.604011 | 5:+14191795 | MsaT025901.1:CDS |
GAAACTAACGGCGACGATGA+CGG | 0.605860 | 5:-14190411 | None:intergenic |
ATTAAATAAAGAAATCGCAA+AGG | 0.608576 | 5:+14192521 | MsaT025901.1:CDS |
ATATATCCCTTCAAGGACAA+TGG | 0.611274 | 5:-14192556 | None:intergenic |
TCCAATGAATTCGAAACTAA+CGG | 0.611494 | 5:-14190423 | None:intergenic |
GATGAAAGTCAGAAGCAATG+AGG | 0.611513 | 5:-14192650 | None:intergenic |
TTGGCAGAGGAATGGTAGAT+CGG | 0.614229 | 5:-14190546 | None:intergenic |
ATGCACAACGCTCCAGAGCA+AGG | 0.615402 | 5:-14192722 | None:intergenic |
ATAATAATGTTAATGGACGC+AGG | 0.616006 | 5:+14192481 | MsaT025901.1:CDS |
AGTTATCTGCAACTACTGCA+AGG | 0.617433 | 5:+14196173 | MsaT025901.1:CDS |
ATGAACTAGGAATAATACAC+CGG | 0.621550 | 5:+14193738 | MsaT025901.1:CDS |
CTGATAGGACCTGTTCCGGA+AGG | 0.623740 | 5:+14196096 | MsaT025901.1:CDS |
AAAACCTGTTACGGCACTGG+TGG | 0.625351 | 5:+14190449 | MsaT025901.1:CDS |
GAGAGGGAGAGAAACCGTTG+TGG | 0.628592 | 5:-14190374 | None:intergenic |
TCTACTACTGCAATGTGGAG+TGG | 0.629640 | 5:+14191613 | MsaT025901.1:CDS |
TTGAAGGGATATATGAAGGT+CGG | 0.632387 | 5:+14192565 | MsaT025901.1:CDS |
AACAGCAACATAATCAGCAA+CGG | 0.639691 | 5:-14191467 | None:intergenic |
GATGACGGTGGAAGAGCGGG+AGG | 0.641097 | 5:-14190396 | None:intergenic |
TGCAATGTGGAGTGGTGACA+AGG | 0.646125 | 5:+14191621 | MsaT025901.1:CDS |
GGTGCAGTGATCTCCATGGG+AGG | 0.646808 | 5:-14192204 | None:intergenic |
AAGGGAAGTTGATCTGAGCA+GGG | 0.657506 | 5:+14192227 | MsaT025901.1:CDS |
TTGTTGAAAGTGCTTCTGGG+AGG | 0.658498 | 5:+14190496 | MsaT025901.1:CDS |
CCATGGAGATCACTGCACCA+AGG | 0.661190 | 5:+14192208 | MsaT025901.1:CDS |
GAATGACATACCTTAGATTG+GGG | 0.664281 | 5:-14194466 | None:intergenic |
AGGAAGCAGAAAATGAGGCA+AGG | 0.666913 | 5:+14192451 | MsaT025901.1:CDS |
AAGAGTGATAGATTTCTCCC+CGG | 0.666927 | 5:+14192084 | MsaT025901.1:CDS |
GAAGAAACCTGAATTTCTGG+AGG | 0.674226 | 5:-14195764 | None:intergenic |
AGATTTCTCCCCGGTCATGG+TGG | 0.682682 | 5:+14192093 | MsaT025901.1:CDS |
TCGCGACGTTAGTGACAGAG+TGG | 0.683668 | 5:+14195541 | MsaT025901.1:CDS |
CAACTCTCTCTTCTCCACAA+CGG | 0.685419 | 5:+14190360 | MsaT025901.1:CDS |
TGAACTAGGAATAATACACC+GGG | 0.688701 | 5:+14193739 | MsaT025901.1:CDS |
ATGTTTCTACTACTGCAATG+TGG | 0.690754 | 5:+14191608 | MsaT025901.1:CDS |
TCATATTACCACCATGACCG+GGG | 0.691294 | 5:-14192101 | None:intergenic |
TATTGTTCGATGGTATGGTG+TGG | 0.697518 | 5:+14192677 | MsaT025901.1:CDS |
ACTAACGGCGACGATGACGG+TGG | 0.698087 | 5:-14190408 | None:intergenic |
CATTCAATAAGACCAGAAGA+CGG | 0.705732 | 5:-14190576 | None:intergenic |
TATGCTTATGATGTTGACAG+TGG | 0.706219 | 5:+14191883 | MsaT025901.1:CDS |
GAGTGGTGACAAGGACAGTG+AGG | 0.708835 | 5:+14191630 | MsaT025901.1:CDS |
TCAATAAGACCAGAAGACGG+AGG | 0.754525 | 5:-14190573 | None:intergenic |
AGTGGTGACAAGGACAGTGA+GGG | 0.770404 | 5:+14191631 | MsaT025901.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 14190267 | 14196236 | 14190267 | ID=MsaG025901 |
Chr5 | mRNA | 14190267 | 14196236 | 14190267 | ID=MsaT025901.1;Parent=MsaG025901 |
Chr5 | exon | 14190267 | 14190647 | 14190267 | ID=MsaT025901.1.exon1;Parent=MsaT025901.1 |
Chr5 | CDS | 14190267 | 14190647 | 14190267 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Chr5 | exon | 14191454 | 14192919 | 14191454 | ID=MsaT025901.1.exon2;Parent=MsaT025901.1 |
Chr5 | CDS | 14191454 | 14192919 | 14191454 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Chr5 | exon | 14193709 | 14193881 | 14193709 | ID=MsaT025901.1.exon3;Parent=MsaT025901.1 |
Chr5 | CDS | 14193709 | 14193881 | 14193709 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Chr5 | exon | 14194231 | 14194477 | 14194231 | ID=MsaT025901.1.exon4;Parent=MsaT025901.1 |
Chr5 | CDS | 14194231 | 14194477 | 14194231 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Chr5 | exon | 14195475 | 14195778 | 14195475 | ID=MsaT025901.1.exon5;Parent=MsaT025901.1 |
Chr5 | CDS | 14195475 | 14195778 | 14195475 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Chr5 | exon | 14196093 | 14196236 | 14196093 | ID=MsaT025901.1.exon6;Parent=MsaT025901.1 |
Chr5 | CDS | 14196093 | 14196236 | 14196093 | ID=cds.MsaT025901.1;Parent=MsaT025901.1 |
Gene Sequence |
Protein sequence |