AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG026173

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026173 MtrunA17_Chr5g0410961 96.812 345 11 0 1 345 1 345 0.0 686
MsaG026173 MtrunA17_Chr4g0039971 44.505 364 153 9 1 334 2 346 6.87e-87 265
MsaG026173 MtrunA17_Chr3g0115821 61.828 186 61 2 1 176 1 186 1.27e-80 249
MsaG026173 MtrunA17_Chr5g0395281 43.567 342 142 12 1 334 1 299 3.26e-74 231
MsaG026173 MtrunA17_Chr2g0323411 70.968 155 45 0 1 155 1 155 4.70e-74 232
MsaG026173 MtrunA17_Chr2g0281071 77.692 130 28 1 1 129 1 130 7.57e-72 226
MsaG026173 MtrunA17_Chr4g0048511 43.385 325 135 8 1 287 1 314 5.48e-71 225
MsaG026173 MtrunA17_Chr6g0453471 71.756 131 37 0 1 131 1 131 1.48e-70 224
MsaG026173 MtrunA17_Chr7g0217741 66.207 145 45 1 1 141 1 145 9.98e-70 220
MsaG026173 MtrunA17_Chr4g0042671 70.455 132 39 0 1 132 1 132 6.82e-69 221
MsaG026173 MtrunA17_Chr4g0037141 65.068 146 51 0 1 146 1 146 7.34e-66 209
MsaG026173 MtrunA17_Chr6g0452271 52.525 198 83 3 1 198 1 187 2.15e-64 207
MsaG026173 MtrunA17_Chr8g0349261 68.462 130 39 2 1 128 1 130 6.71e-64 204
MsaG026173 MtrunA17_Chr4g0057031 69.531 128 39 0 1 128 1 128 4.82e-63 201
MsaG026173 MtrunA17_Chr5g0434571 69.531 128 39 0 1 128 37 164 5.36e-63 204
MsaG026173 MtrunA17_Chr3g0110351 69.291 127 39 0 1 127 1 127 3.43e-62 201
MsaG026173 MtrunA17_Chr3g0131121 67.939 131 42 0 1 131 1 131 7.63e-62 199
MsaG026173 MtrunA17_Chr5g0435101 58.000 150 63 0 3 152 2 151 1.57e-60 193
MsaG026173 MtrunA17_Chr3g0103281 51.813 193 84 6 1 190 1 187 2.53e-60 196
MsaG026173 MtrunA17_Chr8g0385321 66.406 128 43 0 1 128 1 128 4.66e-60 195
MsaG026173 MtrunA17_Chr1g0193371 64.122 131 47 0 1 131 1 131 9.95e-60 196
MsaG026173 MtrunA17_Chr7g0270891 62.963 135 50 0 1 135 1 135 2.84e-59 195
MsaG026173 MtrunA17_Chr1g0203411 70.690 116 34 0 1 116 1 116 3.55e-59 192
MsaG026173 MtrunA17_Chr4g0058631 63.359 131 48 0 1 131 1 131 1.30e-58 193
MsaG026173 MtrunA17_Chr7g0228891 65.625 128 44 0 1 128 1 128 3.18e-58 189
MsaG026173 MtrunA17_Chr3g0121241 66.129 124 42 0 5 128 35 158 4.18e-58 190
MsaG026173 MtrunA17_Chr1g0193801 62.595 131 49 0 1 131 1 131 4.75e-58 192
MsaG026173 MtrunA17_Chr2g0309911 63.636 121 44 0 6 126 5 125 1.16e-57 189
MsaG026173 MtrunA17_Chr1g0187761 70.690 116 34 0 1 116 1 116 3.12e-57 186
MsaG026173 MtrunA17_Chr7g0261281 69.828 116 35 0 1 116 1 116 3.31e-57 187
MsaG026173 MtrunA17_Chr1g0167691 70.085 117 35 0 1 117 1 117 4.79e-57 186
MsaG026173 MtrunA17_Chr7g0274581 56.376 149 60 2 1 148 1 145 6.04e-57 184
MsaG026173 MtrunA17_Chr5g0417821 66.942 121 40 0 10 130 5 125 1.13e-56 186
MsaG026173 MtrunA17_Chr1g0167661 69.231 117 36 0 1 117 1 117 1.45e-56 184
MsaG026173 MtrunA17_Chr3g0117091 63.281 128 47 0 1 128 1 128 1.63e-56 187
MsaG026173 MtrunA17_Chr7g0271241 55.000 160 67 1 1 155 1 160 2.81e-55 185
MsaG026173 MtrunA17_Chr4g0068061 67.241 116 38 0 1 116 1 116 6.70e-55 182
MsaG026173 MtrunA17_Chr1g0211161 58.209 134 56 0 3 136 4 137 9.33e-55 179
MsaG026173 MtrunA17_Chr4g0028311 63.077 130 46 2 1 129 1 129 2.23e-54 181
MsaG026173 MtrunA17_Chr7g0217221 65.254 118 41 0 1 118 1 118 3.21e-54 179
MsaG026173 MtrunA17_Chr4g0044421 64.800 125 43 1 3 126 2 126 3.54e-54 176
MsaG026173 MtrunA17_Chr7g0275911 66.379 116 39 0 1 116 1 116 4.66e-54 178
MsaG026173 MtrunA17_Chr8g0387421 65.254 118 41 0 1 118 1 118 5.08e-54 180
MsaG026173 MtrunA17_Chr7g0254411 63.200 125 44 1 1 123 1 125 2.66e-53 178
MsaG026173 MtrunA17_Chr3g0092401 64.706 119 42 0 1 119 2 120 3.34e-53 177
MsaG026173 MtrunA17_Chr8g0346561 65.254 118 41 0 1 118 1 118 3.45e-53 177
MsaG026173 MtrunA17_Chr8g0342521 57.895 133 56 0 1 133 1 133 4.22e-53 178
MsaG026173 MtrunA17_Chr8g0342541 44.545 220 102 8 1 205 1 215 4.74e-53 178
MsaG026173 MtrunA17_Chr2g0330041 57.353 136 51 1 1 129 1 136 5.83e-53 179
MsaG026173 MtrunA17_Chr4g0060721 58.015 131 49 1 1 125 2 132 6.47e-53 177
MsaG026173 MtrunA17_Chr5g0397231 53.896 154 69 2 1 153 1 153 7.60e-53 177
MsaG026173 MtrunA17_Chr4g0070611 67.241 116 38 0 1 116 1 116 3.80e-52 174
MsaG026173 MtrunA17_Chr7g0264641 62.500 120 44 1 1 119 1 120 4.41e-52 173
MsaG026173 MtrunA17_Chr4g0070641 67.241 116 38 0 1 116 1 116 5.47e-52 170
MsaG026173 MtrunA17_Chr2g0311221 69.091 110 34 0 2 111 4 113 2.08e-51 173
MsaG026173 MtrunA17_Chr1g0151941 53.704 162 70 4 1 160 1 159 2.19e-51 171
MsaG026173 MtrunA17_Chr2g0327351 67.568 111 35 1 1 110 1 111 3.15e-51 172
MsaG026173 MtrunA17_Chr2g0323351 65.254 118 41 0 1 118 1 118 3.61e-51 170
MsaG026173 MtrunA17_Chr6g0453211 67.273 110 36 0 1 110 1 110 1.02e-50 171
MsaG026173 MtrunA17_Chr3g0135311 63.559 118 42 1 1 117 1 118 1.63e-50 171
MsaG026173 MtrunA17_Chr4g0022911 61.864 118 44 1 1 117 1 118 1.06e-49 168
MsaG026173 MtrunA17_Chr4g0022931 63.248 117 42 1 1 116 1 117 1.24e-49 167
MsaG026173 MtrunA17_Chr1g0152011 62.712 118 43 1 1 117 1 118 1.54e-49 169
MsaG026173 MtrunA17_Chr5g0400821 42.411 224 113 4 1 208 1 224 2.47e-49 167
MsaG026173 MtrunA17_Chr4g0022901 61.864 118 44 1 1 117 1 118 7.80e-49 165
MsaG026173 MtrunA17_Chr1g0194291 51.899 158 73 2 2 157 11 167 1.43e-47 161
MsaG026173 MtrunA17_Chr1g0194951 55.814 129 57 0 1 129 1 129 1.72e-47 164
MsaG026173 MtrunA17_Chr4g0032401 55.814 129 50 1 12 133 17 145 2.06e-46 160
MsaG026173 MtrunA17_Chr2g0328771 54.264 129 52 1 12 133 20 148 2.88e-46 159
MsaG026173 MtrunA17_Chr4g0022891 62.832 113 42 0 1 113 1 113 3.40e-46 157
MsaG026173 MtrunA17_Chr3g0099131 64.423 104 37 0 12 115 41 144 3.66e-46 164
MsaG026173 MtrunA17_Chr8g0342481 57.627 118 49 1 1 117 1 118 4.08e-46 161
MsaG026173 MtrunA17_Chr4g0072751 43.243 222 104 5 1 200 1 222 4.62e-46 160
MsaG026173 MtrunA17_Chr7g0228231 66.667 105 35 0 12 116 14 118 4.96e-46 155
MsaG026173 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 6.10e-46 156
MsaG026173 MtrunA17_Chr4g0054391 62.727 110 40 1 1 109 1 110 6.35e-46 158
MsaG026173 MtrunA17_Chr1g0209661 60.000 115 46 0 8 122 23 137 8.25e-46 158
MsaG026173 MtrunA17_Chr1g0203441 60.870 115 44 1 13 127 14 127 1.10e-45 157
MsaG026173 MtrunA17_Chr6g0487491 57.143 126 45 2 1 117 1 126 1.21e-45 156
MsaG026173 MtrunA17_Chr6g0450101 58.678 121 48 1 1 119 1 121 1.42e-45 154
MsaG026173 MtrunA17_Chr3g0080861 61.321 106 41 0 10 115 35 140 2.06e-45 162
MsaG026173 MtrunA17_Chr8g0354661 62.264 106 40 0 10 115 35 140 6.53e-45 161
MsaG026173 MtrunA17_Chr4g0055981 62.500 112 42 0 14 125 57 168 1.44e-44 152
MsaG026173 MtrunA17_Chr3g0088461 61.905 105 40 0 12 116 22 126 2.09e-44 155
MsaG026173 MtrunA17_Chr7g0269831 62.069 116 44 0 1 116 1 116 2.30e-44 155
MsaG026173 MtrunA17_Chr1g0194301 52.459 122 58 0 8 129 29 150 3.18e-43 150
MsaG026173 MtrunA17_Chr1g0186061 62.136 103 39 0 13 115 21 123 1.04e-42 149
MsaG026173 MtrunA17_Chr1g0168661 62.136 103 39 0 13 115 22 124 1.96e-42 148
MsaG026173 MtrunA17_Chr7g0247131 70.588 85 25 0 44 128 10 94 2.46e-42 148
MsaG026173 MtrunA17_Chr1g0154031 61.538 104 40 0 12 115 76 179 2.52e-42 152
MsaG026173 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 8.01e-42 140
MsaG026173 MtrunA17_Chr8g0343831 59.322 118 44 1 1 118 1 114 2.71e-41 145
MsaG026173 MtrunA17_Chr2g0293911 56.693 127 53 1 8 132 20 146 5.65e-41 146
MsaG026173 MtrunA17_Chr6g0470971 58.772 114 46 1 13 126 15 127 8.20e-41 144
MsaG026173 MtrunA17_Chr2g0327821 59.615 104 42 0 12 115 6 109 1.45e-40 142
MsaG026173 MtrunA17_Chr1g0180391 60.000 105 42 0 12 116 19 123 1.50e-40 142
MsaG026173 MtrunA17_Chr4g0068921 54.331 127 56 1 8 132 20 146 5.22e-40 139
MsaG026173 MtrunA17_Chr5g0434831 59.813 107 43 0 11 117 6 112 5.32e-40 139
MsaG026173 MtrunA17_Chr5g0395221 71.591 88 25 0 1 88 1 88 5.40e-40 136
MsaG026173 MtrunA17_Chr2g0322521 61.905 105 40 0 11 115 28 132 8.88e-40 144
MsaG026173 MtrunA17_Chr5g0434931 57.944 107 45 0 11 117 34 140 1.67e-39 141
MsaG026173 MtrunA17_Chr5g0434911 55.856 111 49 0 7 117 16 126 2.54e-39 140
MsaG026173 MtrunA17_Chr7g0220341 56.198 121 50 2 10 128 23 142 2.81e-39 140
MsaG026173 MtrunA17_Chr8g0360111 58.824 102 42 0 11 112 24 125 2.51e-38 137
MsaG026173 MtrunA17_Chr5g0434841 58.879 107 44 0 11 117 19 125 3.53e-38 138
MsaG026173 MtrunA17_Chr7g0240821 47.727 132 69 0 16 147 5 136 3.85e-38 135
MsaG026173 MtrunA17_Chr4g0030881 56.364 110 41 1 13 115 8 117 7.77e-38 136
MsaG026173 MtrunA17_Chr5g0440781 53.982 113 50 2 12 123 12 123 3.12e-37 132
MsaG026173 MtrunA17_Chr7g0228991 56.075 107 47 0 11 117 28 134 6.86e-37 134
MsaG026173 MtrunA17_Chr5g0440761 53.982 113 50 2 12 123 12 123 7.96e-37 133
MsaG026173 MtrunA17_Chr1g0192411 52.066 121 57 1 1 121 1 120 8.43e-37 137
MsaG026173 MtrunA17_Chr5g0441141 53.982 113 50 2 12 123 12 123 1.11e-36 133
MsaG026173 MtrunA17_Chr2g0294811 61.364 88 34 0 1 88 1 88 2.77e-36 127
MsaG026173 MtrunA17_Chr3g0099141 60.920 87 34 0 8 94 36 122 3.58e-36 128
MsaG026173 MtrunA17_Chr4g0013361 39.766 171 94 5 12 179 10 174 4.57e-36 132
MsaG026173 MtrunA17_Chr8g0334881 51.327 113 53 2 8 119 6 117 1.09e-35 132
MsaG026173 MtrunA17_Chr8g0342511 60.920 87 34 0 1 87 1 87 8.74e-35 122
MsaG026173 MtrunA17_Chr5g0441131 52.174 115 53 2 10 123 7 120 1.20e-33 122
MsaG026173 MtrunA17_Chr8g0342531 57.303 89 38 0 1 89 1 89 1.28e-33 122
MsaG026173 MtrunA17_Chr2g0323321 58.696 92 37 1 1 92 1 91 9.31e-33 118
MsaG026173 MtrunA17_Chr4g0008551 52.941 102 47 1 14 115 38 138 1.37e-31 121
MsaG026173 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 3.60e-31 114
MsaG026173 MtrunA17_Chr6g0454921 49.123 114 57 1 9 122 10 122 8.31e-31 116
MsaG026173 MtrunA17_Chr5g0401731 50.459 109 53 1 14 122 15 122 8.60e-31 119
MsaG026173 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 1.22e-30 113
MsaG026173 MtrunA17_Chr7g0238631 52.427 103 48 1 14 116 113 214 1.87e-30 121
MsaG026173 MtrunA17_Chr4g0053431 50.000 102 50 1 14 115 5 105 1.49e-29 114
MsaG026173 MtrunA17_Chr3g0139671 47.573 103 53 1 14 116 85 186 2.44e-29 119
MsaG026173 MtrunA17_Chr3g0139671 33.000 100 65 2 14 112 33 131 1.72e-11 65.5
MsaG026173 MtrunA17_Chr3g0093811 42.069 145 74 4 44 182 14 154 8.92e-29 112
MsaG026173 MtrunA17_Chr5g0429661 45.098 102 55 1 14 115 122 222 2.67e-28 112
MsaG026173 MtrunA17_Chr1g0157731 47.573 103 53 1 14 116 91 192 4.04e-28 115
MsaG026173 MtrunA17_Chr1g0157731 33.962 106 68 2 14 118 39 143 2.17e-12 68.2
MsaG026173 MtrunA17_Chr4g0058991 45.794 107 57 1 12 118 207 312 1.10e-26 109
MsaG026173 MtrunA17_Chr6g0453751 53.261 92 34 2 11 93 19 110 1.20e-26 102
MsaG026173 MtrunA17_Chr3g0133601 46.078 102 54 1 14 115 37 137 1.61e-26 105
MsaG026173 MtrunA17_Chr5g0434901 64.706 68 24 0 46 113 7 74 8.65e-26 99.8
MsaG026173 MtrunA17_Chr3g0117511 43.636 110 61 1 9 118 178 286 1.08e-25 107
MsaG026173 MtrunA17_Chr5g0425591 52.941 85 39 1 10 93 7 91 1.33e-25 98.6
MsaG026173 MtrunA17_Chr7g0228531 43.636 110 60 2 9 118 215 322 1.42e-25 106
MsaG026173 MtrunA17_Chr5g0437321 48.113 106 53 2 8 112 12 116 3.20e-25 103
MsaG026173 MtrunA17_Chr6g0480581 44.954 109 56 2 14 119 4 111 3.90e-25 101
MsaG026173 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 4 73 1.04e-24 99.8
MsaG026173 MtrunA17_Chr7g0229131 52.326 86 40 1 44 129 4 88 1.50e-24 98.2
MsaG026173 MtrunA17_Chr5g0397841 48.958 96 48 1 14 109 110 204 4.68e-24 102
MsaG026173 MtrunA17_Chr6g0460661 44.330 97 53 1 14 110 16 111 2.66e-23 94.7
MsaG026173 MtrunA17_Chr4g0042501 42.105 114 60 2 2 115 98 205 3.06e-23 99.8
MsaG026173 MtrunA17_Chr7g0238651 45.833 96 50 1 17 110 10 105 9.29e-23 97.4
MsaG026173 MtrunA17_Chr5g0417621 42.105 114 60 2 2 115 127 234 1.20e-22 98.2
MsaG026173 MtrunA17_Chr7g0228481 40.952 105 60 2 9 113 215 317 7.82e-22 95.9
MsaG026173 MtrunA17_Chr3g0125801 43.519 108 60 1 8 115 10 116 2.07e-21 92.8
MsaG026173 MtrunA17_Chr5g0395231 28.315 279 143 11 78 334 5 248 2.12e-21 91.7
MsaG026173 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 2.14e-21 93.6
MsaG026173 MtrunA17_Chr7g0228401 46.067 89 47 1 25 113 290 377 4.41e-21 94.0
MsaG026173 MtrunA17_Chr1g0177901 46.667 90 44 2 24 113 7 92 1.28e-20 88.6
MsaG026173 MtrunA17_Chr7g0233061 41.667 108 56 3 14 119 180 282 9.73e-19 86.3
MsaG026173 MtrunA17_Chr7g0254261 39.130 115 64 2 1 115 81 189 2.08e-18 85.1
MsaG026173 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 2.15e-18 85.9
MsaG026173 MtrunA17_Chr8g0362231 38.679 106 63 2 17 122 25 128 1.97e-17 82.8
MsaG026173 MtrunA17_Chr1g0193901 51.724 87 40 2 12 96 11 97 1.22e-16 75.1
MsaG026173 MtrunA17_Chr1g0193891 51.724 87 40 2 12 96 11 97 1.22e-16 75.1
MsaG026173 MtrunA17_Chr1g0193871 51.724 87 40 2 12 96 11 97 1.22e-16 75.1
MsaG026173 MtrunA17_Chr1g0193881 51.724 87 40 2 12 96 11 97 1.22e-16 75.1
MsaG026173 MtrunA17_Chr4g0042621 68.889 45 14 0 88 132 14 58 1.97e-15 76.3
MsaG026173 MtrunA17_Chr7g0247141 61.702 47 17 1 1 46 1 47 1.76e-13 64.7
MsaG026173 MtrunA17_Chr3g0145551 75.676 37 9 0 92 128 2 38 3.96e-13 64.3
MsaG026173 MtrunA17_Chr5g0434871 56.818 44 19 0 74 117 2 45 1.21e-12 62.8
MsaG026173 MtrunA17_Chr3g0104491 35.821 67 39 1 53 115 1 67 5.02e-11 62.8
MsaG026173 MtrunA17_Chr7g0233151 43.137 51 29 0 65 115 1 51 6.79e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026173 AT5G16770.1 48.732 355 139 11 1 338 1 329 1.01e-94 285
MsaG026173 AT5G16770.2 48.732 355 139 11 1 338 1 329 1.01e-94 285
MsaG026173 AT5G16770.4 49.003 351 136 11 1 334 1 325 1.04e-94 285
MsaG026173 AT5G16770.3 49.003 351 136 11 1 334 1 325 1.04e-94 285
MsaG026173 AT3G02940.1 45.797 345 149 8 1 338 1 314 9.97e-89 270
MsaG026173 AT3G02940.3 45.797 345 149 8 1 338 1 314 9.97e-89 270
MsaG026173 AT3G02940.2 46.041 341 146 8 1 334 1 310 1.81e-88 268
MsaG026173 AT4G17785.1 44.800 375 162 15 1 345 1 360 6.55e-87 266
MsaG026173 AT4G17785.2 44.505 364 157 15 1 334 1 349 7.82e-82 253
MsaG026173 AT1G34670.1 63.842 177 60 2 1 175 1 175 5.19e-79 246
MsaG026173 AT5G10280.1 61.622 185 59 4 1 176 1 182 1.49e-76 239
MsaG026173 AT4G21440.1 73.103 145 36 1 1 145 1 142 1.65e-75 236
MsaG026173 AT5G65230.1 64.641 181 59 1 1 176 1 181 4.98e-75 234
MsaG026173 AT4G28110.1 78.295 129 28 0 1 129 1 129 6.78e-73 228
MsaG026173 AT4G05100.1 79.231 130 26 1 1 129 1 130 1.37e-72 228
MsaG026173 AT5G15310.4 71.756 131 37 0 1 131 1 131 3.36e-71 222
MsaG026173 AT5G15310.1 71.756 131 37 0 1 131 1 131 1.41e-70 223
MsaG026173 AT5G15310.2 71.756 131 37 0 1 131 1 131 1.92e-70 222
MsaG026173 AT3G01140.2 65.359 153 48 1 1 153 1 148 5.93e-70 222
MsaG026173 AT3G61250.1 69.697 132 40 0 1 132 1 132 9.95e-69 218
MsaG026173 AT3G01140.1 64.667 150 48 1 4 153 47 191 7.24e-67 216
MsaG026173 AT4G12350.1 62.745 153 54 1 1 153 1 150 6.53e-65 207
MsaG026173 AT4G22680.1 71.875 128 36 0 1 128 1 128 2.33e-64 205
MsaG026173 AT1G66230.1 70.312 128 38 0 1 128 1 128 8.48e-64 204
MsaG026173 AT5G54230.1 68.966 145 42 1 1 145 1 142 1.28e-63 205
MsaG026173 AT4G09460.1 69.291 127 39 0 1 127 1 127 2.19e-63 201
MsaG026173 AT5G16600.1 70.312 128 38 0 1 128 1 128 1.75e-62 202
MsaG026173 AT4G38620.1 68.750 128 40 0 1 128 1 128 2.58e-62 200
MsaG026173 AT1G18570.1 70.312 128 37 1 1 127 1 128 3.28e-62 202
MsaG026173 AT1G35515.1 65.217 138 44 1 1 134 1 138 4.94e-62 197
MsaG026173 AT1G22640.1 68.504 127 40 0 1 127 1 127 1.18e-61 198
MsaG026173 AT4G34990.1 68.750 128 40 0 1 128 1 128 2.72e-61 197
MsaG026173 AT5G61420.2 66.406 128 43 0 1 128 1 128 9.56e-61 199
MsaG026173 AT2G16720.1 68.504 127 40 0 1 127 1 127 1.23e-60 196
MsaG026173 AT1G57560.2 62.590 139 52 0 1 139 1 139 2.49e-60 195
MsaG026173 AT1G57560.1 64.885 131 46 0 1 131 1 131 3.66e-60 196
MsaG026173 AT5G56110.1 64.234 137 46 1 1 137 1 134 5.14e-60 196
MsaG026173 AT5G60890.1 66.406 128 43 0 1 128 1 128 9.48e-60 194
MsaG026173 AT3G13540.1 66.400 125 42 0 4 128 15 139 1.67e-59 192
MsaG026173 AT1G74080.1 66.412 131 44 0 1 131 1 131 2.32e-59 194
MsaG026173 AT5G07690.1 66.406 128 43 0 1 128 1 128 2.36e-59 194
MsaG026173 AT5G14340.1 64.179 134 48 0 1 134 13 146 2.77e-59 192
MsaG026173 AT5G62320.1 63.158 133 42 1 2 127 3 135 3.32e-59 191
MsaG026173 AT5G26660.1 62.319 138 51 1 1 138 1 137 6.14e-59 194
MsaG026173 AT2G31180.1 48.980 196 84 3 1 181 1 195 5.71e-58 188
MsaG026173 AT1G09540.1 64.844 128 45 0 1 128 1 128 8.52e-58 191
MsaG026173 AT4G01680.3 64.122 131 47 0 1 131 1 131 2.11e-57 186
MsaG026173 AT5G07700.1 64.844 128 45 0 1 128 1 128 2.16e-57 189
MsaG026173 AT5G07700.2 64.844 128 45 0 1 128 1 128 2.16e-57 189
MsaG026173 AT3G23250.1 53.846 169 64 2 1 155 1 169 5.35e-57 187
MsaG026173 AT4G01680.1 64.122 131 47 0 1 131 1 131 7.22e-57 188
MsaG026173 AT3G12720.1 63.636 121 44 0 6 126 16 136 1.53e-56 186
MsaG026173 AT1G74430.1 63.077 130 48 0 1 130 1 130 1.17e-55 183
MsaG026173 AT1G06180.1 69.828 116 35 0 1 116 1 116 2.88e-55 181
MsaG026173 AT3G47600.1 65.546 119 41 0 1 119 1 119 5.55e-55 183
MsaG026173 AT3G28470.1 58.904 146 58 1 1 146 1 144 1.18e-54 182
MsaG026173 AT1G16490.1 66.957 115 38 0 2 116 4 118 2.92e-54 179
MsaG026173 AT3G13890.2 64.103 117 42 0 1 117 1 117 5.19e-54 181
MsaG026173 AT5G62470.2 63.866 119 43 0 1 119 1 119 5.40e-54 181
MsaG026173 AT4G01680.2 58.741 143 47 1 1 131 1 143 1.69e-53 179
MsaG026173 AT5G23000.1 66.102 118 39 1 1 117 1 118 2.07e-53 179
MsaG026173 AT1G63910.1 60.938 128 50 0 1 128 1 128 2.07e-53 180
MsaG026173 AT1G79180.1 66.667 117 39 0 2 118 4 120 2.42e-53 177
MsaG026173 AT1G08810.1 64.754 122 43 0 1 122 1 122 9.36e-53 176
MsaG026173 AT1G56160.1 66.957 115 38 0 2 116 4 118 1.26e-52 176
MsaG026173 AT1G74650.1 63.866 119 43 0 1 119 1 119 1.56e-52 177
MsaG026173 AT5G62470.1 63.866 119 42 1 1 119 1 118 3.00e-52 176
MsaG026173 AT5G57620.1 65.254 118 40 1 1 117 1 118 4.73e-52 176
MsaG026173 AT5G49330.1 64.655 116 41 0 1 116 1 116 1.05e-51 175
MsaG026173 AT3G62610.1 66.379 116 39 0 1 116 1 116 1.36e-51 174
MsaG026173 AT4G37780.1 63.559 118 42 1 1 117 1 118 3.05e-51 172
MsaG026173 AT2G36890.1 60.630 127 49 1 1 126 1 127 3.52e-51 172
MsaG026173 AT3G28910.1 62.295 122 46 0 1 122 1 122 5.23e-51 172
MsaG026173 AT3G13890.1 59.524 126 42 1 1 117 1 126 6.31e-51 173
MsaG026173 AT3G12820.1 65.517 116 40 0 3 118 5 120 6.89e-51 169
MsaG026173 AT2G36890.2 60.630 127 49 1 1 126 42 168 7.16e-51 172
MsaG026173 AT2G47460.1 63.793 116 42 0 1 116 1 116 8.06e-51 173
MsaG026173 AT1G18710.1 60.156 128 51 0 1 128 1 128 9.39e-51 170
MsaG026173 AT5G65790.1 64.407 118 41 1 1 117 1 118 3.50e-50 172
MsaG026173 AT3G49690.1 62.712 118 43 1 1 117 1 118 6.63e-49 167
MsaG026173 AT5G06100.1 51.799 139 63 2 8 143 28 165 1.62e-47 167
MsaG026173 AT1G79180.2 52.027 148 38 1 2 116 4 151 4.81e-47 162
MsaG026173 AT5G06100.5 51.799 139 63 2 8 143 28 165 6.91e-47 166
MsaG026173 AT5G06100.2 51.799 139 63 2 8 143 28 165 6.91e-47 166
MsaG026173 AT5G06100.3 51.799 139 63 2 8 143 28 165 6.91e-47 166
MsaG026173 AT5G06100.4 51.799 139 63 2 8 143 28 165 6.91e-47 166
MsaG026173 AT1G48000.1 60.833 120 45 1 10 127 30 149 9.84e-47 159
MsaG026173 AT5G40350.1 64.220 109 39 0 12 120 17 125 1.95e-46 157
MsaG026173 AT5G12870.1 63.889 108 39 0 12 119 18 125 7.15e-46 158
MsaG026173 AT3G27810.1 63.889 108 39 0 9 116 17 124 2.08e-45 155
MsaG026173 AT5G55020.1 61.607 112 42 1 10 121 24 134 3.24e-45 162
MsaG026173 AT2G32460.2 61.905 105 40 0 11 115 5 109 3.67e-45 161
MsaG026173 AT2G32460.1 61.905 105 40 0 11 115 17 121 4.14e-45 161
MsaG026173 AT4G26930.1 61.905 105 40 0 10 114 17 121 4.20e-45 159
MsaG026173 AT3G11440.2 61.538 104 40 0 12 115 41 144 4.71e-45 160
MsaG026173 AT5G14750.1 52.027 148 64 3 13 156 17 161 5.01e-45 153
MsaG026173 AT5G40330.1 62.500 104 39 0 13 116 13 116 5.49e-45 154
MsaG026173 AT3G01530.1 61.468 109 42 0 8 116 21 129 8.03e-45 153
MsaG026173 AT2G26960.1 61.111 108 41 1 14 121 22 128 1.74e-44 158
MsaG026173 AT3G11440.3 61.538 104 40 0 12 115 41 144 2.05e-44 160
MsaG026173 AT3G11440.4 61.538 104 40 0 12 115 41 144 2.05e-44 160
MsaG026173 AT3G11440.1 61.538 104 40 0 12 115 41 144 2.05e-44 160
MsaG026173 AT3G30210.1 64.423 104 37 0 11 114 26 129 5.62e-44 153
MsaG026173 AT5G35550.1 63.551 107 39 0 12 118 14 120 1.54e-43 151
MsaG026173 AT3G24310.1 62.617 107 40 0 9 115 15 121 4.53e-43 150
MsaG026173 AT1G25340.1 57.391 115 49 0 13 127 19 133 7.40e-43 150
MsaG026173 AT3G08500.1 60.952 105 41 0 12 116 30 134 2.42e-42 150
MsaG026173 AT4G13480.1 64.078 103 37 0 13 115 7 109 3.33e-42 147
MsaG026173 AT2G47190.1 55.856 111 49 0 12 122 20 130 3.38e-42 148
MsaG026173 AT3G27920.1 59.048 105 43 0 13 117 15 119 6.74e-42 146
MsaG026173 AT3G06490.1 57.480 127 52 1 8 132 15 141 3.81e-41 147
MsaG026173 AT3G48920.1 60.784 102 40 0 13 114 19 120 8.32e-41 144
MsaG026173 AT5G52600.1 60.577 104 41 0 12 115 12 115 1.12e-40 142
MsaG026173 AT1G68320.1 55.172 116 52 0 12 127 19 134 1.27e-40 144
MsaG026173 AT5G49620.1 50.345 145 70 1 8 150 22 166 1.45e-40 145
MsaG026173 AT3G46130.1 58.879 107 44 0 9 115 6 112 3.34e-40 142
MsaG026173 AT5G59780.3 59.223 103 42 0 13 115 9 111 8.43e-40 140
MsaG026173 AT5G26660.2 65.625 96 32 1 43 138 12 106 3.25e-39 141
MsaG026173 AT4G25560.1 60.377 106 42 0 13 118 11 116 3.55e-39 140
MsaG026173 AT3G53200.1 59.615 104 42 0 12 115 9 112 3.89e-39 139
MsaG026173 AT1G25340.2 54.783 115 47 1 13 127 19 128 2.45e-38 138
MsaG026173 AT5G52260.1 61.321 106 41 0 13 118 13 118 5.03e-38 137
MsaG026173 AT1G25340.3 54.783 115 47 1 13 127 19 128 5.25e-38 138
MsaG026173 AT1G66370.1 55.652 115 47 1 1 115 1 111 1.28e-37 135
MsaG026173 AT5G49620.2 45.912 159 70 2 8 150 22 180 7.77e-37 135
MsaG026173 AT1G66380.1 59.048 105 43 0 11 115 7 111 1.46e-34 124
MsaG026173 AT3G60460.1 50.459 109 52 2 12 119 11 118 1.54e-34 129
MsaG026173 AT1G56650.1 59.048 105 43 0 11 115 7 111 7.61e-34 125
MsaG026173 AT1G66390.1 57.143 105 45 0 11 115 7 111 7.23e-33 123
MsaG026173 AT2G26950.1 50.926 108 52 1 14 121 18 124 3.94e-32 124
MsaG026173 AT3G47600.2 68.000 75 24 0 45 119 39 113 1.92e-31 121
MsaG026173 AT5G35550.2 60.440 91 32 1 39 129 44 130 3.95e-31 118
MsaG026173 AT5G40350.2 65.789 76 26 0 45 120 5 80 4.83e-31 115
MsaG026173 AT3G12820.2 71.831 71 20 0 48 118 2 72 5.15e-31 116
MsaG026173 AT5G59780.2 69.863 73 22 0 43 115 18 90 1.61e-30 115
MsaG026173 AT3G46130.4 69.863 73 22 0 43 115 18 90 3.46e-30 115
MsaG026173 AT5G14750.3 57.447 94 36 2 48 140 18 108 4.02e-30 113
MsaG026173 AT3G27810.2 66.667 72 24 0 45 116 4 75 4.45e-30 113
MsaG026173 AT2G39880.1 55.882 102 44 1 14 115 50 150 4.48e-30 118
MsaG026173 AT3G46130.3 69.444 72 22 0 44 115 9 80 6.30e-30 114
MsaG026173 AT3G53200.2 69.863 73 22 0 43 115 7 79 6.33e-30 114
MsaG026173 AT1G22640.3 72.464 69 19 0 59 127 2 70 8.63e-30 113
MsaG026173 AT5G02320.1 50.485 103 50 1 14 116 127 228 1.08e-29 119
MsaG026173 AT5G02320.2 50.485 103 50 1 14 116 127 228 1.08e-29 119
MsaG026173 AT5G02320.3 50.485 103 50 1 14 116 67 168 1.37e-29 119
MsaG026173 AT3G55730.1 52.830 106 49 1 14 119 56 160 2.11e-29 117
MsaG026173 AT5G58850.1 50.000 102 50 1 14 115 105 205 5.06e-29 116
MsaG026173 AT1G18960.1 42.742 124 65 3 14 137 10 127 6.32e-29 114
MsaG026173 AT3G09370.1 47.414 116 56 2 14 125 130 244 9.81e-29 116
MsaG026173 AT3G09370.2 50.000 102 50 1 14 115 135 235 1.05e-28 116
MsaG026173 AT3G09370.3 50.000 102 50 1 14 115 143 243 1.24e-28 116
MsaG026173 AT3G09230.1 48.077 104 53 1 14 117 55 157 2.86e-28 114
MsaG026173 AT4G18770.1 43.200 125 70 1 14 138 217 340 3.24e-28 114
MsaG026173 AT3G50060.1 48.039 102 52 1 14 115 6 106 6.10e-28 111
MsaG026173 AT5G11050.1 46.154 104 55 1 12 115 103 205 6.85e-28 113
MsaG026173 AT4G32730.5 47.573 103 53 1 14 116 87 188 2.86e-27 113
MsaG026173 AT4G32730.5 34.000 100 64 2 14 112 35 133 4.84e-12 67.8
MsaG026173 AT4G32730.4 47.573 103 53 1 14 116 87 188 2.86e-27 113
MsaG026173 AT4G32730.4 34.000 100 64 2 14 112 35 133 4.84e-12 67.8
MsaG026173 AT4G32730.3 47.573 103 53 1 14 116 87 188 2.86e-27 113
MsaG026173 AT4G32730.3 34.000 100 64 2 14 112 35 133 4.84e-12 67.8
MsaG026173 AT4G32730.2 47.573 103 53 1 14 116 87 188 2.86e-27 113
MsaG026173 AT4G32730.2 34.000 100 64 2 14 112 35 133 4.84e-12 67.8
MsaG026173 AT4G32730.1 47.573 103 53 1 14 116 87 188 3.07e-27 113
MsaG026173 AT4G32730.1 34.000 100 64 2 14 112 35 133 5.02e-12 67.4
MsaG026173 AT2G23290.1 50.980 102 49 1 14 115 13 113 3.77e-27 109
MsaG026173 AT5G11510.2 30.303 264 162 8 14 269 81 330 4.21e-27 112
MsaG026173 AT5G11510.5 30.303 264 162 8 14 269 81 330 4.72e-27 112
MsaG026173 AT5G11510.3 30.303 264 162 8 14 269 81 330 4.87e-27 112
MsaG026173 AT5G11510.1 30.303 264 162 8 14 269 81 330 4.87e-27 112
MsaG026173 AT5G11510.4 30.303 264 162 8 14 269 81 330 4.87e-27 112
MsaG026173 AT4G37260.1 49.020 102 51 1 14 115 13 113 8.50e-27 108
MsaG026173 AT3G27785.1 39.333 150 73 4 12 156 187 323 2.24e-26 109
MsaG026173 AT5G67300.1 48.039 102 52 1 14 115 6 106 2.81e-26 106
MsaG026173 AT5G40360.1 43.689 103 57 1 12 114 156 257 7.15e-26 106
MsaG026173 AT1G71030.2 53.247 77 36 0 51 127 5 81 1.83e-25 101
MsaG026173 AT1G71030.1 53.247 77 36 0 51 127 19 95 2.27e-25 101
MsaG026173 AT1G69560.1 36.905 168 94 4 11 177 104 260 1.06e-24 102
MsaG026173 AT1G69560.2 36.905 168 94 4 11 177 120 276 1.33e-24 102
MsaG026173 AT1G17950.1 44.118 102 56 1 14 115 5 105 1.23e-23 98.2
MsaG026173 AT3G23250.2 48.649 111 43 2 59 155 2 112 1.35e-23 97.8
MsaG026173 AT1G66380.3 63.889 72 26 0 44 115 7 78 1.59e-23 94.0
MsaG026173 AT2G25230.1 43.119 109 61 1 12 120 24 131 5.70e-23 96.3
MsaG026173 AT1G26780.1 44.118 102 56 1 14 115 98 198 1.70e-22 95.9
MsaG026173 AT1G26780.2 44.118 102 56 1 14 115 98 198 2.18e-22 97.1
MsaG026173 AT1G73410.1 42.500 120 62 2 10 129 2 114 5.91e-22 93.6
MsaG026173 AT1G73410.2 42.500 120 62 2 10 129 2 114 7.37e-22 92.4
MsaG026173 AT3G29020.1 40.777 103 60 1 14 116 65 166 2.83e-21 91.3
MsaG026173 AT5G14750.4 53.012 83 35 2 59 140 2 81 4.41e-21 88.6
MsaG026173 AT5G14750.2 53.012 83 35 2 59 140 2 81 4.41e-21 88.6
MsaG026173 AT1G66380.2 55.696 79 35 0 11 89 7 85 4.42e-21 87.4
MsaG026173 AT2G37630.1 45.833 96 50 1 17 110 7 102 6.30e-21 92.8
MsaG026173 AT3G29020.2 40.777 103 60 1 14 116 67 168 6.44e-21 92.0
MsaG026173 AT5G17800.1 43.137 102 57 1 14 115 93 193 7.63e-21 92.0
MsaG026173 AT4G33450.1 37.168 113 65 2 3 115 13 119 8.61e-21 90.5
MsaG026173 AT4G00540.2 41.284 109 60 2 11 116 100 207 9.81e-20 89.7
MsaG026173 AT4G00540.1 41.667 108 59 2 12 116 99 205 1.47e-19 89.7
MsaG026173 AT5G40430.1 37.615 109 66 2 12 120 52 158 2.00e-18 84.0
MsaG026173 AT5G61420.1 70.833 48 14 0 81 128 2 49 1.38e-17 82.4
MsaG026173 AT1G14350.2 38.384 99 60 1 17 115 28 125 1.47e-17 83.6
MsaG026173 AT1G14350.1 38.384 99 60 1 17 115 28 125 1.47e-17 83.6
MsaG026173 AT5G39700.1 42.708 96 54 1 15 110 57 151 2.34e-17 79.7
MsaG026173 AT4G28110.2 73.810 42 11 0 88 129 4 45 3.11e-16 76.6
MsaG026173 AT5G15310.3 70.455 44 13 0 88 131 9 52 3.92e-16 77.4
MsaG026173 AT2G02820.2 35.354 99 63 1 17 115 33 130 2.34e-15 77.4
MsaG026173 AT2G02820.1 35.354 99 63 1 17 115 33 130 3.03e-15 77.0
MsaG026173 AT5G14340.2 63.830 47 17 0 88 134 10 56 3.98e-15 73.2
MsaG026173 AT2G02820.3 35.354 99 63 1 17 115 33 130 4.89e-15 75.5
MsaG026173 AT4G25560.2 67.391 46 15 0 73 118 5 50 1.44e-14 72.4
MsaG026173 AT5G59780.1 65.217 46 16 0 70 115 1 46 1.48e-14 71.2
MsaG026173 AT3G46130.2 65.217 46 16 0 70 115 1 46 2.84e-14 70.9
MsaG026173 AT1G22640.2 70.000 40 12 0 88 127 16 55 2.81e-13 68.2
MsaG026173 AT3G18100.3 36.082 97 61 1 12 108 496 591 3.80e-12 67.8
MsaG026173 AT3G18100.1 36.082 97 61 1 12 108 544 639 3.95e-12 67.8
MsaG026173 AT1G74650.3 60.465 43 17 0 77 119 1 43 4.46e-12 65.9
MsaG026173 AT3G18100.2 36.082 97 61 1 12 108 331 426 6.06e-12 67.0
MsaG026173 AT3G18100.4 36.082 97 61 1 12 108 383 478 6.08e-12 67.4
MsaG026173 AT1G74430.2 50.000 54 27 0 77 130 8 61 7.35e-12 64.3
MsaG026173 AT3G28910.2 56.522 46 20 0 77 122 1 46 1.02e-11 64.7

Find 77 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTGGCTTGTGAGTTTC+AGG 0.124801 5:-17997775 None:intergenic
ACAAACATGGCCATGGAAAT+TGG 0.172972 5:+17997234 MsaT026173.1:CDS
CAAGTTACCAAATGAATTAT+TGG 0.200841 5:-17997947 None:intergenic
TCACCACCACTCAAACTTAA+TGG 0.223472 5:-17998066 None:intergenic
AACCCTAGTTTATACTCTTA+TGG 0.226899 5:+17998102 MsaT026173.1:CDS
CAATAATTCATTTGGTAACT+TGG 0.256156 5:+17997948 MsaT026173.1:CDS
TGATTGAAAATTCCAGTTCT+AGG 0.257401 5:-17998258 None:intergenic
ATAATGAGATAAAGAATTAT+TGG 0.265414 5:+17997710 MsaT026173.1:CDS
AGATCTTGATTATAGCAAAA+TGG 0.266341 5:+17998176 MsaT026173.1:CDS
AATTTCCCTCTCTTGATATC+AGG 0.313386 5:-17997332 None:intergenic
CAAACATGGCCATGGAAATT+GGG 0.315080 5:+17997235 MsaT026173.1:CDS
AGAAAATCTACTTCCTGCTT+TGG 0.327301 5:+17998224 MsaT026173.1:CDS
ATGAATACCAATAATTCATT+TGG 0.331994 5:+17997940 MsaT026173.1:CDS
ATATTCCCTAAGGGGTTATA+AGG 0.339967 5:-17997979 None:intergenic
AGGTGATTGTAATCAGTTCT+TGG 0.348925 5:-17997790 None:intergenic
AAAATTGCAGCTCATCTTCC+AGG 0.357488 5:+17997679 MsaT026173.1:CDS
CAAATGCAATCTTTGATGAA+TGG 0.368377 5:+17998331 MsaT026173.1:CDS
TCATCTTCTTCTTGTGTCCA+TGG 0.370739 5:-17997191 None:intergenic
CAAAGCGTGCTGGTTTGAAT+AGG 0.372184 5:+17997267 MsaT026173.1:CDS
GTTGCTTCCTCTCCTAGAAC+TGG 0.376485 5:+17998246 MsaT026173.1:CDS
ATAGGTGTGGGAAGAGTTGT+AGG 0.377058 5:+17997285 MsaT026173.1:CDS
AATTATCCTTATAACCCCTT+AGG 0.378309 5:+17997973 MsaT026173.1:CDS
TTACTTGGCATGTCAAATAT+AGG 0.382706 5:+17997829 MsaT026173.1:CDS
ATCAACCTTCATTCAGTACT+TGG 0.383770 5:+17997380 MsaT026173.1:CDS
AAATGCAATCTTTGATGAAT+GGG 0.387848 5:+17998332 MsaT026173.1:CDS
AATCAAGTGGTGGCTCCTAC+TGG 0.398129 5:+17998373 MsaT026173.1:CDS
GATCTTGATTATAGCAAAAT+GGG 0.401633 5:+17998177 MsaT026173.1:CDS
GTGGGAAGAGTTGTAGGTTA+AGG 0.418094 5:+17997291 MsaT026173.1:CDS
AATAATTCATTTGGTAACTT+GGG 0.423937 5:+17997949 MsaT026173.1:CDS
ATGAGTCTTTCAAACTTACT+TGG 0.438102 5:+17997814 MsaT026173.1:CDS
TCATCAAAGATTGCATTTGA+AGG 0.444624 5:-17998327 None:intergenic
CGAAATTTGTGACGCAGAAG+TGG 0.450928 5:-17998699 None:intergenic
ATTATCCTTATAACCCCTTA+GGG 0.471963 5:+17997974 MsaT026173.1:CDS
TCAAAGCTGGATATTTCAAA+AGG 0.472267 5:+17998138 MsaT026173.1:CDS
TGTCCATAAGAGTATAAACT+AGG 0.478465 5:-17998105 None:intergenic
GGAGAGGAAGCAACCAAAGC+AGG 0.484843 5:-17998237 None:intergenic
ATTATTGGAACACAAACATA+AGG 0.499952 5:+17997725 MsaT026173.1:CDS
AAATTGAATGGATTAAAGCT+AGG 0.500163 5:-17998006 None:intergenic
CTTCTGCGTCACAAATTTCG+TGG 0.504067 5:+17998702 MsaT026173.1:CDS
TGTTTCCAAGTACTGAATGA+AGG 0.504557 5:-17997385 None:intergenic
ATCTCATTATCTGTTCGTCC+TGG 0.508263 5:-17997697 None:intergenic
AATTGAATGGATTAAAGCTA+GGG 0.513125 5:-17998005 None:intergenic
CGTCACAAATTTCGTGGTAG+AGG 0.513887 5:+17998708 MsaT026173.1:CDS
ACAAAGTGAGTCTTCAAAGC+TGG 0.515723 5:+17998125 MsaT026173.1:CDS
GCTAGGGTTAATATTCCCTA+AGG 0.516564 5:-17997989 None:intergenic
GTAAGTTTGAAAGACTCATA+AGG 0.528357 5:-17997810 None:intergenic
CTAGGGTTAATATTCCCTAA+GGG 0.537885 5:-17997988 None:intergenic
AAAGTGTTCCCCAATTTCCA+TGG 0.538619 5:-17997244 None:intergenic
AAGCTGGATATTTCAAAAGG+TGG 0.539184 5:+17998141 MsaT026173.1:CDS
GGAACACTTTCAAAGCGTGC+TGG 0.539535 5:+17997257 MsaT026173.1:CDS
ATAATTCATTTGGTAACTTG+GGG 0.539650 5:+17997950 MsaT026173.1:CDS
GGAAGAGTTGTAGGTTAAGG+TGG 0.542911 5:+17997294 MsaT026173.1:CDS
TATATCAACAAACATGGCCA+TGG 0.555092 5:+17997227 MsaT026173.1:CDS
ATTTGAAGGTGAGTGATCAA+TGG 0.559476 5:-17998313 None:intergenic
AAACATGGCCATGGAAATTG+GGG 0.562809 5:+17997236 MsaT026173.1:CDS
GTCCATAAGAGTATAAACTA+GGG 0.567531 5:-17998104 None:intergenic
TTGAGACCTGATATCAAGAG+AGG 0.581244 5:+17997326 MsaT026173.1:CDS
AATGAGCCATTAAGTTTGAG+TGG 0.592575 5:+17998060 MsaT026173.1:CDS
TCACCATGTTGTGATGAGAT+TGG 0.596582 5:+17997155 MsaT026173.1:CDS
CACCACTTGATTCATCATCA+AGG 0.599804 5:-17998362 None:intergenic
TGAGACCTGATATCAAGAGA+GGG 0.607779 5:+17997327 MsaT026173.1:CDS
GATGAGATTGGTGTAAAGAA+AGG 0.608348 5:+17997167 MsaT026173.1:CDS
CTCTAAAAGCTCTTTCCAGT+AGG 0.609003 5:-17998388 None:intergenic
ATGAGATTGGTGTAAAGAAA+GGG 0.612763 5:+17997168 MsaT026173.1:CDS
TATCTTGTTGTAAACCAAGA+GGG 0.613559 5:-17997870 None:intergenic
TTGGTGTAAAGAAAGGGCCA+TGG 0.623416 5:+17997174 MsaT026173.1:CDS
GAAAATTCCAGTTCTAGGAG+AGG 0.625567 5:-17998253 None:intergenic
CGTGCTGGTTTGAATAGGTG+TGG 0.635864 5:+17997272 MsaT026173.1:CDS
TAGGGTTAATATTCCCTAAG+GGG 0.636230 5:-17997987 None:intergenic
TGTGCAATATTATTATGGGT+AGG 0.658465 5:+17997132 None:intergenic
ATATCTTGTTGTAAACCAAG+AGG 0.662547 5:-17997871 None:intergenic
ATTGATTATATCAACAAACA+TGG 0.672369 5:+17997221 MsaT026173.1:CDS
CTTGATGATGAATCAAGTGG+TGG 0.674841 5:+17998363 MsaT026173.1:CDS
ACACCAATCTCATCACAACA+TGG 0.675221 5:-17997158 None:intergenic
TTCCTTGATGATGAATCAAG+TGG 0.687990 5:+17998360 MsaT026173.1:CDS
GTGCTGGTTTGAATAGGTGT+GGG 0.691156 5:+17997273 MsaT026173.1:CDS
GAGCCATTAAGTTTGAGTGG+TGG 0.713030 5:+17998063 MsaT026173.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 17997146 17998727 17997146 ID=MsaG026173
Chr5 mRNA 17997146 17998727 17997146 ID=MsaT026173.1;Parent=MsaG026173
Chr5 exon 17997146 17997408 17997146 ID=MsaT026173.1.exon1;Parent=MsaT026173.1
Chr5 CDS 17997146 17997408 17997146 ID=cds.MsaT026173.1;Parent=MsaT026173.1
Chr5 exon 17997672 17998409 17997672 ID=MsaT026173.1.exon2;Parent=MsaT026173.1
Chr5 CDS 17997672 17998409 17997672 ID=cds.MsaT026173.1;Parent=MsaT026173.1
Chr5 exon 17998691 17998727 17998691 ID=MsaT026173.1.exon3;Parent=MsaT026173.1
Chr5 CDS 17998691 17998727 17998691 ID=cds.MsaT026173.1;Parent=MsaT026173.1
Gene Sequence

>MsaT026173.1

ATGGGTAGGTCACCATGTTGTGATGAGATTGGTGTAAAGAAAGGGCCATGGACACAAGAAGAAGATGAGAAGCTGATTGATTATATCAACAAACATGGCCATGGAAATTGGGGAACACTTTCAAAGCGTGCTGGTTTGAATAGGTGTGGGAAGAGTTGTAGGTTAAGGTGGACAAATTATTTGAGACCTGATATCAAGAGAGGGAAATTCACTGATGAAGAAGAAAGAGTTATCATCAACCTTCATTCAGTACTTGGAAACAAGTGGTCGAAAATTGCAGCTCATCTTCCAGGACGAACAGATAATGAGATAAAGAATTATTGGAACACAAACATAAGGAAAAAGCTTCTCAAGATGGGAATTGATCCTGAAACTCACAAGCCAAGAACTGATTACAATCACCTTATGAGTCTTTCAAACTTACTTGGCATGTCAAATATAGGCAATACTTTTAGCAACAACCCTCTTGGTTTACAACAAGATATTACCCACCTAGCCAAAATGCAATTGTTGCAAAATATGTTGCAAATTATGAATACCAATAATTCATTTGGTAACTTGGGGAATTATCCTTATAACCCCTTAGGGAATATTAACCCTAGCTTTAATCCATTCAATTTGTTTTTGAATGGAACAAACACAATTCAAACTAATGAGCCATTAAGTTTGAGTGGTGGTGAAGAATATGCTATGAACCCTAGTTTATACTCTTATGGACAAAGTGAGTCTTCAAAGCTGGATATTTCAAAAGGTGGATCAAGTTTACAAGATCTTGATTATAGCAAAATGGGAAGCATTTCATGTGAAAATCAAGAAGAAAATCTACTTCCTGCTTTGGTTGCTTCCTCTCCTAGAACTGGAATTTTCAATCAAATGGAAAATGATTGTAACAAAGCTCAAATGTCCATTGATCACTCACCTTCAAATGCAATCTTTGATGAATGGGAGAAGTTCCTTGATGATGAATCAAGTGGTGGCTCCTACTGGAAAGAGCTTTTAGACTTGACATCCACTTCTGCGTCACAAATTTCGTGGTAG
Protein sequence

>MsaT026173.1

MGRSPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMGIDPETHKPRTDYNHLMSLSNLLGMSNIGNTFSNNPLGLQQDITHLAKMQLLQNMLQIMNTNNSFGNLGNYPYNPLGNINPSFNPFNLFLNGTNTIQTNEPLSLSGGEEYAMNPSLYSYGQSESSKLDISKGGSSLQDLDYSKMGSISCENQEENLLPALVASSPRTGIFNQMENDCNKAQMSIDHSPSNAIFDEWEKFLDDESSGGSYWKELLDLTSTSASQISW*