AlfalfaGEDB | MsaG026328

M. sativa ssp. caerulea / MsaG026328

KEGG: K09260
GO: GO:0000003 GO:0000900 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006417 GO:0007275 GO:0008150 GO:0009266 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045182 GO:0045892 GO:0045934 GO:0048367 GO:0048438 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090079 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG026328	XP_003613086.1	89.583	192	9	1	1	181	1	192	1.47e-113	333

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG026328	sp\|Q9FVC1\|SVP_ARATH	63.902	205	51	2	1	182	1	205	4.51e-80	241

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG026328	tr\|G7JXQ9\|G7JXQ9_MEDTR	89.583	192	9	1	1	181	1	192	7.01e-114	333

TFs/TRs:

Gene ID	Type	Classification
MsaG026328	TF	MADS-MIKC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG026328	MtrunA17_Chr5g0412461	89.583	192	9	1	1	181	1	192	1.35e-117	333
MsaG026328	MtrunA17_Chr5g0412271	80.311	193	25	2	1	180	1	193	1.67e-102	295
MsaG026328	MtrunA17_Chr5g0427401	54.190	179	69	3	1	168	1	177	1.62e-53	170
MsaG026328	MtrunA17_Chr4g0049901	47.753	178	80	2	1	165	27	204	8.62e-46	150
MsaG026328	MtrunA17_Chr2g0279821	43.558	163	82	2	1	153	1	163	6.97e-35	123
MsaG026328	MtrunA17_Chr5g0411691	43.275	171	84	5	1	160	1	169	3.64e-34	121
MsaG026328	MtrunA17_Chr5g0420081	45.665	173	80	5	1	160	1	172	3.71e-34	120
MsaG026328	MtrunA17_Chr3g0077501	38.191	199	90	4	1	173	1	192	2.11e-33	119
MsaG026328	MtrunA17_Chr3g0097101	41.040	173	91	2	1	162	16	188	2.91e-33	119
MsaG026328	MtrunA17_Chr4g0049541	42.690	171	86	2	1	160	1	170	1.10e-32	117
MsaG026328	MtrunA17_Chr7g0246431	42.012	169	87	3	1	158	1	169	1.27e-32	116
MsaG026328	MtrunA17_Chr4g0061691	44.379	169	80	4	1	156	1	168	3.65e-32	115
MsaG026328	MtrunA17_Chr7g0220121	41.860	172	82	3	1	158	1	168	5.22e-32	115
MsaG026328	MtrunA17_Chr8g0366231	44.970	169	79	5	1	156	1	168	6.63e-32	115
MsaG026328	MtrunA17_Chr4g0061671	38.506	174	89	3	1	160	1	170	9.30e-32	113
MsaG026328	MtrunA17_Chr4g0020221	40.341	176	92	2	1	163	1	176	2.96e-30	111
MsaG026328	MtrunA17_Chr4g0057151	38.806	201	107	4	1	186	1	200	3.86e-30	109
MsaG026328	MtrunA17_Chr8g0351031	40.462	173	81	4	1	156	1	168	3.18e-29	108
MsaG026328	MtrunA17_Chr2g0284911	37.288	177	92	3	1	162	16	188	2.25e-28	106
MsaG026328	MtrunA17_Chr8g0351041	39.394	165	80	3	1	149	1	161	2.43e-28	103
MsaG026328	MtrunA17_Chr5g0420091	39.645	169	90	4	1	157	1	169	3.63e-28	105
MsaG026328	MtrunA17_Chr6g0455511	40.588	170	84	3	1	156	1	167	4.40e-28	105
MsaG026328	MtrunA17_Chr7g0220111	40.237	169	86	4	1	156	1	167	6.58e-28	105
MsaG026328	MtrunA17_Chr8g0380021	34.146	205	116	5	1	187	17	220	7.95e-28	104
MsaG026328	MtrunA17_Chr1g0164791	39.106	179	79	4	1	156	1	172	3.31e-27	102
MsaG026328	MtrunA17_Chr8g0351051	36.598	194	105	4	1	179	1	191	7.21e-27	102
MsaG026328	MtrunA17_Chr3g0142191	40.000	195	95	7	1	178	1	190	8.69e-27	101
MsaG026328	MtrunA17_Chr1g0204111	39.080	174	94	3	1	162	17	190	8.79e-27	102
MsaG026328	MtrunA17_Chr6g0474371	40.237	169	88	2	1	156	1	169	3.02e-25	97.1
MsaG026328	MtrunA17_Chr3g0125241	38.650	163	87	4	1	155	26	183	7.51e-25	96.3
MsaG026328	MtrunA17_Chr3g0122251	37.143	175	95	3	1	160	1	175	1.50e-24	96.3
MsaG026328	MtrunA17_Chr1g0173161	58.228	79	32	1	1	78	1	79	1.94e-24	91.7
MsaG026328	MtrunA17_Chr2g0308251	59.155	71	29	0	1	71	1	71	1.13e-23	89.7
MsaG026328	MtrunA17_Chr4g0018421	37.870	169	92	3	1	156	1	169	1.42e-23	92.8
MsaG026328	MtrunA17_Chr5g0427921	62.712	59	22	0	1	59	1	59	2.43e-23	88.2
MsaG026328	MtrunA17_Chr3g0134451	68.571	70	21	1	1	69	1	70	7.33e-23	93.2
MsaG026328	MtrunA17_Chr7g0246381	66.102	59	20	0	1	59	1	59	2.00e-21	83.6
MsaG026328	MtrunA17_Chr8g0377561	65.517	58	20	0	1	58	1	58	3.81e-21	83.6
MsaG026328	MtrunA17_Chr1g0159661	33.529	170	86	4	1	155	1	158	1.13e-20	84.7
MsaG026328	MtrunA17_Chr5g0404951	34.524	168	98	3	1	156	1	168	2.01e-20	85.1
MsaG026328	MtrunA17_Chr5g0425191	65.517	58	20	0	1	58	1	58	6.62e-20	80.5
MsaG026328	MtrunA17_Chr4g0044071	62.069	58	22	0	1	58	1	58	2.26e-19	79.3
MsaG026328	MtrunA17_Chr3g0099421	36.429	140	74	4	2	132	34	167	3.28e-19	82.4
MsaG026328	MtrunA17_Chr3g0089141	35.461	141	74	4	2	132	9	142	4.19e-19	81.6
MsaG026328	MtrunA17_Chr1g0208561	32.941	170	93	5	2	161	9	167	4.46e-19	81.6
MsaG026328	MtrunA17_Chr1g0206991	37.692	130	66	4	2	122	9	132	5.92e-19	80.1
MsaG026328	MtrunA17_Chr2g0325971	48.529	68	35	0	2	69	9	76	1.12e-18	80.5
MsaG026328	MtrunA17_Chr8g0355091	31.765	170	96	6	2	162	9	167	5.55e-18	79.0
MsaG026328	MtrunA17_Chr1g0206721	36.434	129	67	4	2	121	9	131	6.97e-18	78.6
MsaG026328	MtrunA17_Chr1g0208581	49.254	67	34	0	2	68	9	75	1.24e-17	77.8
MsaG026328	MtrunA17_Chr2g0292791	50.000	68	34	0	2	69	9	76	2.59e-17	77.0
MsaG026328	MtrunA17_Chr3g0099411	48.529	68	35	0	2	69	9	76	3.92e-17	76.3
MsaG026328	MtrunA17_Chr1g0166611	68.085	47	15	0	13	59	17	63	4.27e-17	73.9
MsaG026328	MtrunA17_Chr1g0206701	48.529	68	35	0	2	69	9	76	6.04e-17	75.9
MsaG026328	MtrunA17_Chr4g0052061	36.441	118	66	3	1	118	1	109	1.55e-16	73.2
MsaG026328	MtrunA17_Chr1g0187361	47.059	68	36	0	2	69	9	76	1.93e-16	74.7
MsaG026328	MtrunA17_Chr1g0149391	51.429	70	33	1	2	71	9	77	2.19e-16	74.3
MsaG026328	MtrunA17_Chr1g0188671	48.529	68	35	0	2	69	47	114	2.74e-16	74.7
MsaG026328	MtrunA17_Chr5g0419601	49.275	69	35	0	1	69	8	76	3.51e-16	73.9
MsaG026328	MtrunA17_Chr4g0052081	35.185	108	69	1	1	108	1	107	3.78e-16	72.8
MsaG026328	MtrunA17_Chr8g0379021	50.000	68	34	0	2	69	12	79	3.87e-16	72.8
MsaG026328	MtrunA17_Chr5g0422421	50.000	70	34	1	2	71	9	77	5.46e-16	73.6
MsaG026328	MtrunA17_Chr2g0317451	48.529	68	35	0	2	69	9	76	5.52e-16	73.6
MsaG026328	MtrunA17_Chr2g0317481	48.529	68	35	0	2	69	9	76	6.05e-16	73.2
MsaG026328	MtrunA17_Chr8g0357771	44.615	65	36	0	1	65	1	65	1.63e-15	70.9
MsaG026328	MtrunA17_Chr4g0060841	48.571	70	34	1	1	68	1	70	2.28e-15	73.2
MsaG026328	MtrunA17_Chr8g0376821	42.029	69	40	0	1	69	1	69	2.74e-15	70.5
MsaG026328	MtrunA17_Chr5g0422941	49.254	67	34	0	2	68	9	75	2.96e-15	71.2
MsaG026328	MtrunA17_Chr5g0417661	52.830	53	25	0	1	53	56	108	3.30e-15	68.9
MsaG026328	MtrunA17_Chr2g0333981	46.377	69	37	0	1	69	11	79	3.69e-15	70.1
MsaG026328	MtrunA17_Chr4g0018951	55.357	56	25	0	14	69	24	79	5.47e-15	69.3
MsaG026328	MtrunA17_Chr2g0300441	45.455	66	36	0	4	69	11	76	5.73e-15	70.5
MsaG026328	MtrunA17_Chr1g0169761	32.353	136	74	3	1	119	1	135	7.31e-15	69.3
MsaG026328	MtrunA17_Chr3g0085241	31.214	173	95	5	1	154	40	207	7.45e-15	70.5
MsaG026328	MtrunA17_Chr3g0119901	43.478	69	39	0	1	69	8	76	7.92e-15	69.7
MsaG026328	MtrunA17_Chr2g0300421	46.154	65	35	0	2	66	9	73	7.99e-15	68.9
MsaG026328	MtrunA17_Chr3g0089151	44.118	68	38	0	2	69	9	76	1.04e-14	67.8
MsaG026328	MtrunA17_Chr1g0175611	49.123	57	29	0	1	57	1	57	1.06e-14	68.6
MsaG026328	MtrunA17_Chr1g0175601	34.146	123	70	3	1	122	1	113	1.71e-14	68.2
MsaG026328	MtrunA17_Chr1g0180591	47.368	57	30	0	1	57	1	57	3.23e-14	67.4
MsaG026328	MtrunA17_Chr8g0356071	40.698	86	46	2	1	83	1	84	3.56e-14	67.0
MsaG026328	MtrunA17_Chr4g0074101	36.275	102	56	2	1	93	1	102	4.54e-14	67.4
MsaG026328	MtrunA17_Chr3g0111841	49.153	59	30	0	8	66	2	60	1.79e-12	60.1
MsaG026328	MtrunA17_Chr1g0206691	45.763	59	32	0	11	69	1	59	2.66e-12	63.2
MsaG026328	MtrunA17_Chr4g0071601	49.275	69	35	0	1	69	11	79	3.59e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG026328	AT2G22540.3	63.902	205	51	2	1	182	1	205	4.59e-81	241
MsaG026328	AT2G22540.1	63.902	205	51	2	1	182	1	205	4.59e-81	241
MsaG026328	AT2G22540.2	62.927	205	48	3	1	182	1	200	1.31e-77	232
MsaG026328	AT4G24540.1	61.538	169	52	3	1	157	1	168	4.06e-61	189
MsaG026328	AT5G62165.3	41.304	184	88	4	1	168	1	180	1.47e-33	119
MsaG026328	AT5G62165.1	41.304	184	88	4	1	168	1	180	1.47e-33	119
MsaG026328	AT5G62165.2	41.304	184	88	4	1	168	1	180	1.47e-33	119
MsaG026328	AT4G09960.1	37.879	198	94	4	1	173	1	194	4.39e-33	118
MsaG026328	AT4G09960.6	37.879	198	94	4	1	173	2	195	4.55e-33	118
MsaG026328	AT4G09960.5	37.879	198	94	4	1	173	11	204	6.17e-33	118
MsaG026328	AT4G09960.3	37.879	198	94	4	1	173	27	220	1.25e-32	118
MsaG026328	AT1G69120.2	41.714	175	88	4	1	162	1	174	4.08e-32	116
MsaG026328	AT5G13790.1	43.931	173	81	4	1	163	1	167	4.52e-32	117
MsaG026328	AT1G69120.1	41.714	175	88	4	1	162	1	174	8.74e-32	115
MsaG026328	AT3G61120.1	42.105	171	90	2	1	162	1	171	9.03e-32	115
MsaG026328	AT5G51870.1	42.857	168	84	2	1	156	1	168	1.03e-31	114
MsaG026328	AT5G51870.4	42.857	168	84	2	1	156	1	168	1.26e-31	114
MsaG026328	AT5G51870.3	42.857	168	84	2	1	156	11	178	1.57e-31	114
MsaG026328	AT4G09960.2	37.824	193	87	5	1	173	1	180	4.13e-31	113
MsaG026328	AT2G42830.1	39.884	173	93	2	1	162	16	188	6.53e-31	113
MsaG026328	AT4G22950.2	42.690	171	86	2	1	160	1	170	7.86e-31	110
MsaG026328	AT5G13790.2	42.614	176	82	4	1	163	1	170	9.28e-31	113
MsaG026328	AT5G51870.2	45.161	155	69	3	1	139	1	155	1.02e-30	110
MsaG026328	AT3G57230.1	40.230	174	92	3	1	163	1	173	1.06e-30	112
MsaG026328	AT3G57230.4	40.230	174	92	3	1	163	1	173	1.06e-30	112
MsaG026328	AT1G26310.1	40.909	176	90	4	1	162	1	176	1.23e-30	112
MsaG026328	AT5G60910.1	40.909	176	84	5	1	160	1	172	1.41e-30	112
MsaG026328	AT4G09960.4	36.634	202	95	4	1	173	96	293	1.98e-30	114
MsaG026328	AT2G14210.1	43.750	176	84	3	1	163	1	174	2.13e-30	111
MsaG026328	AT3G58780.1	39.306	173	94	2	1	162	16	188	2.48e-30	112
MsaG026328	AT2G14210.2	43.750	176	84	3	1	163	1	174	2.59e-30	111
MsaG026328	AT3G58780.5	39.306	173	94	2	1	162	22	194	2.81e-30	112
MsaG026328	AT4G22950.3	41.954	174	89	2	1	163	1	173	3.12e-30	110
MsaG026328	AT4G22950.1	41.954	174	89	2	1	163	1	173	3.12e-30	110
MsaG026328	AT5G51870.5	45.161	155	69	3	1	139	24	178	3.33e-30	110
MsaG026328	AT2G42830.2	39.429	175	93	3	1	162	16	190	8.19e-30	110
MsaG026328	AT4G18960.1	37.313	201	102	6	2	182	18	214	1.33e-29	110
MsaG026328	AT3G57230.2	43.704	135	64	3	1	124	1	134	1.34e-29	107
MsaG026328	AT2G45660.1	39.521	167	90	2	1	156	1	167	1.52e-29	108
MsaG026328	AT5G23260.2	39.024	205	106	7	1	187	1	204	1.77e-29	109
MsaG026328	AT1G24260.2	39.106	179	94	3	1	164	1	179	1.80e-29	109
MsaG026328	AT4G37940.1	39.412	170	93	2	1	160	1	170	1.99e-29	108
MsaG026328	AT5G62165.17	41.875	160	74	3	1	145	1	156	2.11e-29	107
MsaG026328	AT5G62165.12	41.875	160	74	3	1	145	1	156	2.11e-29	107
MsaG026328	AT5G62165.11	41.875	160	74	3	1	145	1	156	2.11e-29	107
MsaG026328	AT5G23260.4	39.024	205	106	7	1	187	17	220	2.44e-29	109
MsaG026328	AT5G62165.10	40.217	184	76	5	1	168	1	166	2.71e-29	107
MsaG026328	AT5G62165.4	40.217	184	76	5	1	168	1	166	2.71e-29	107
MsaG026328	AT3G30260.1	45.588	136	62	3	1	124	1	136	3.96e-29	108
MsaG026328	AT1G24260.1	38.202	178	96	3	1	164	1	178	9.37e-29	107
MsaG026328	AT5G62165.6	44.521	146	62	3	1	131	1	142	1.23e-28	104
MsaG026328	AT5G62165.9	44.521	146	62	3	1	131	1	142	1.23e-28	104
MsaG026328	AT5G62165.7	44.521	146	62	3	1	131	1	142	1.23e-28	104
MsaG026328	AT5G62165.8	44.521	146	62	3	1	131	1	142	1.23e-28	104
MsaG026328	AT5G62165.13	44.521	146	62	3	1	131	1	142	1.23e-28	104
MsaG026328	AT2G22630.1	42.614	176	79	4	1	160	1	170	1.46e-28	106
MsaG026328	AT2G22630.2	42.614	176	79	4	1	160	1	170	1.46e-28	106
MsaG026328	AT2G45650.1	39.181	171	86	2	1	157	1	167	1.87e-28	107
MsaG026328	AT2G45660.2	40.491	163	72	3	1	145	1	156	6.31e-28	103
MsaG026328	AT4G37940.3	41.791	134	68	2	1	124	1	134	1.11e-27	103
MsaG026328	AT3G57390.3	68.116	69	22	0	1	69	1	69	1.54e-27	103
MsaG026328	AT4G37940.4	38.650	163	90	2	1	153	1	163	1.71e-27	103
MsaG026328	AT2G03710.3	35.028	177	95	3	1	161	1	173	1.74e-27	102
MsaG026328	AT2G03710.1	34.831	178	96	3	1	162	1	174	2.40e-27	104
MsaG026328	AT3G57390.1	68.116	69	22	0	1	69	1	69	2.43e-27	104
MsaG026328	AT2G03710.2	34.831	178	96	3	1	162	1	174	2.62e-27	104
MsaG026328	AT3G58780.2	37.647	170	94	2	1	162	16	181	3.17e-27	103
MsaG026328	AT5G65070.1	40.323	186	95	7	1	177	1	179	5.87e-27	102
MsaG026328	AT3G58780.4	40.667	150	78	2	1	139	16	165	6.60e-27	103
MsaG026328	AT5G23260.1	38.537	205	102	8	1	187	17	215	8.32e-27	103
MsaG026328	AT5G15800.1	38.798	183	94	5	1	168	1	180	8.40e-27	102
MsaG026328	AT5G15800.2	38.798	183	94	5	1	168	1	180	1.16e-26	102
MsaG026328	AT5G10140.2	42.759	145	78	4	1	141	1	144	2.68e-26	99.4
MsaG026328	AT5G51860.2	36.224	196	105	2	1	180	1	192	3.29e-26	100
MsaG026328	AT1G24260.3	40.000	160	81	3	1	145	1	160	3.34e-26	100
MsaG026328	AT5G10140.3	42.759	145	78	4	1	141	1	144	3.98e-26	99.4
MsaG026328	AT5G10140.4	42.759	145	78	4	1	141	1	144	4.97e-26	99.0
MsaG026328	AT5G62165.14	60.000	75	30	0	1	75	1	75	5.14e-26	96.7
MsaG026328	AT5G10140.1	42.759	145	78	4	1	141	1	144	6.16e-26	99.0
MsaG026328	AT5G23260.3	44.366	142	67	4	1	131	1	141	6.33e-25	97.4
MsaG026328	AT3G02310.1	37.989	179	93	5	1	164	1	176	7.18e-25	97.8
MsaG026328	AT3G58780.3	34.343	198	94	3	1	162	16	213	7.77e-25	98.2
MsaG026328	AT5G65070.4	42.069	145	69	5	1	137	1	138	1.38e-24	94.4
MsaG026328	AT4G11880.4	42.262	168	84	4	1	156	1	167	1.97e-24	95.9
MsaG026328	AT4G11880.1	42.262	168	84	4	1	156	1	167	1.97e-24	95.9
MsaG026328	AT5G51860.1	37.209	172	88	2	1	156	1	168	2.17e-24	95.5
MsaG026328	AT4G11880.2	40.678	177	76	6	1	164	1	161	2.54e-24	94.4
MsaG026328	AT4G11880.3	40.678	177	76	6	1	164	1	161	2.54e-24	94.4
MsaG026328	AT5G65060.3	37.647	170	92	6	1	161	1	165	4.19e-24	94.4
MsaG026328	AT5G65060.2	37.037	162	91	4	1	160	1	153	6.00e-24	93.6
MsaG026328	AT3G02310.2	38.690	168	91	3	1	156	1	168	8.70e-24	93.6
MsaG026328	AT3G54340.1	35.602	191	109	6	1	178	1	190	1.58e-23	93.6
MsaG026328	AT5G65060.1	35.714	168	96	4	1	160	1	164	1.80e-23	92.8
MsaG026328	AT5G65050.5	39.130	161	89	4	1	160	1	153	2.25e-23	92.0
MsaG026328	AT5G65050.2	37.500	168	95	3	1	161	1	165	3.21e-23	91.7
MsaG026328	AT5G20240.2	44.444	135	67	4	1	127	1	135	7.30e-23	89.7
MsaG026328	AT5G65050.3	37.126	167	95	3	1	160	1	164	1.80e-22	90.1
MsaG026328	AT5G20240.1	44.444	135	67	4	1	127	1	135	2.53e-22	90.1
MsaG026328	AT5G65070.2	35.023	217	94	8	1	177	1	210	4.45e-22	89.7
MsaG026328	AT5G65070.3	34.862	218	94	8	1	177	1	211	1.87e-21	88.2
MsaG026328	AT1G71692.1	69.643	56	17	0	1	56	1	56	5.17e-21	86.7
MsaG026328	AT5G65050.1	37.333	150	84	3	1	143	1	147	6.58e-21	85.5
MsaG026328	AT5G65070.5	55.556	72	31	1	1	71	1	72	2.03e-20	85.1
MsaG026328	AT5G65080.3	37.580	157	78	6	1	145	8	156	2.54e-19	81.6
MsaG026328	AT1G22130.1	65.517	58	20	0	1	58	1	58	8.24e-19	82.8
MsaG026328	AT1G77980.1	63.793	58	21	0	1	58	1	58	1.81e-18	82.0
MsaG026328	AT1G77080.11	37.576	165	99	4	1	161	1	165	4.04e-18	78.2
MsaG026328	AT4G36590.1	46.067	89	48	0	2	90	7	95	8.13e-18	79.0
MsaG026328	AT1G77080.4	37.234	188	97	6	1	170	1	185	1.33e-17	77.4
MsaG026328	AT5G65080.2	57.627	59	25	0	1	59	8	66	3.42e-17	76.3
MsaG026328	AT1G77080.5	36.145	166	102	4	1	162	1	166	6.78e-17	74.7
MsaG026328	AT1G77080.2	34.158	202	80	5	1	170	1	181	9.43e-17	75.1
MsaG026328	AT1G77950.3	50.000	70	34	1	1	69	1	70	1.20e-16	75.9
MsaG026328	AT1G77950.2	50.000	70	34	1	1	69	1	70	1.20e-16	75.9
MsaG026328	AT1G77950.1	50.000	70	34	1	1	69	1	70	1.20e-16	75.9
MsaG026328	AT1G77950.4	50.000	70	34	1	1	69	1	70	1.20e-16	75.9
MsaG026328	AT2G34440.1	45.588	68	37	0	1	68	1	68	1.88e-16	73.6
MsaG026328	AT2G24840.1	40.426	94	53	2	1	94	62	152	7.41e-16	73.9
MsaG026328	AT2G03060.3	58.491	53	22	0	1	53	1	53	8.94e-16	74.7
MsaG026328	AT2G03060.7	58.491	53	22	0	1	53	1	53	8.94e-16	74.7
MsaG026328	AT2G03060.1	58.491	53	22	0	1	53	1	53	8.94e-16	74.7
MsaG026328	AT2G03060.2	58.491	53	22	0	1	53	1	53	1.05e-15	74.7
MsaG026328	AT1G01530.1	44.776	67	37	0	1	67	6	72	3.11e-15	72.0
MsaG026328	AT1G69540.1	56.604	53	23	0	1	53	1	53	5.76e-15	72.4
MsaG026328	AT4G37435.1	40.404	99	55	2	1	95	1	99	6.77e-15	69.7
MsaG026328	AT1G69540.2	56.604	53	23	0	1	53	1	53	6.88e-15	72.0
MsaG026328	AT3G66656.1	44.118	68	38	0	1	68	1	68	9.01e-15	69.3
MsaG026328	AT1G18750.4	52.830	53	25	0	1	53	1	53	1.16e-14	71.6
MsaG026328	AT1G77080.8	35.211	213	94	9	1	170	1	212	1.23e-14	70.1
MsaG026328	AT1G18750.1	52.830	53	25	0	1	53	1	53	1.32e-14	71.2
MsaG026328	AT1G72350.1	53.333	60	28	0	2	61	43	102	1.32e-14	69.7
MsaG026328	AT1G18750.3	52.830	53	25	0	1	53	1	53	1.46e-14	71.2
MsaG026328	AT5G60440.1	38.372	86	52	1	2	87	7	91	1.95e-14	70.5
MsaG026328	AT1G77080.12	34.337	166	67	3	1	145	1	145	2.22e-14	67.8
MsaG026328	AT3G04100.1	41.791	67	39	0	2	68	14	80	2.49e-14	68.9
MsaG026328	AT1G31140.2	43.956	91	37	2	1	77	1	91	2.65e-14	68.9
MsaG026328	AT1G31140.1	49.296	71	34	1	1	69	1	71	3.50e-14	68.6
MsaG026328	AT1G65360.1	37.778	90	54	1	1	88	6	95	4.41e-14	68.6
MsaG026328	AT2G26320.1	45.333	75	39	1	1	73	17	91	6.97e-14	65.5
MsaG026328	AT1G47760.1	41.176	68	40	0	1	68	1	68	2.83e-13	65.5
MsaG026328	AT1G28460.1	44.776	67	37	0	2	68	8	74	1.57e-12	63.5
MsaG026328	AT1G29962.1	43.284	67	38	0	2	68	8	74	7.70e-12	61.6

Find 28 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCTCATCTGCCTTAATTGA+TGG	0.212199	5:+20451958	None:intergenic
TTGGAGAAGTCTCTTGAAAC+TGG	0.275036	5:-20451894	MsaT026328.1:CDS
CTCAGAAAAGCCATCAATTA+AGG	0.306084	5:-20451968	MsaT026328.1:intron
TCTGGAAGAATTACAACAAT+TGG	0.380411	5:-20451913	MsaT026328.1:CDS
AGAACCGTCGCTAGAGTTGC+AGG	0.391211	5:-20452850	MsaT026328.1:intron
AAGAAGAGGATTAATCAAAA+AGG	0.392982	5:-20454494	MsaT026328.1:CDS
TCTTTGAATACTCTAACTTA+AGG	0.420420	5:-20454405	MsaT026328.1:intron
TCAGGGAGAGAAGATTATGA+TGG	0.464183	5:-20451770	MsaT026328.1:intron
AGAGTATTCAAAGAGCTTGC+CGG	0.489914	5:+20454414	None:intergenic
AAGTCTCTTGAAACTGGGTT+GGG	0.490075	5:-20451888	MsaT026328.1:CDS
TAGGTGACGGACATGTTTAA+CGG	0.499468	5:-20447115	MsaT026328.1:CDS
GAAGTCTCTTGAAACTGGGT+TGG	0.501534	5:-20451889	MsaT026328.1:CDS
GTATAAGAGTTAACGACTCC+TGG	0.513213	5:-20441844	MsaT026328.1:intron
ATGTTTAACGGTAAAAGTCT+TGG	0.522824	5:-20447103	MsaT026328.1:CDS
GAGAACGTGGTCACTGAAGA+AGG	0.533782	5:-20447067	MsaT026328.1:intron
TTTAACGGTAAAAGTCTTGG+AGG	0.549693	5:-20447100	MsaT026328.1:CDS
GATCAATGAGCTACAAACAA+AGG	0.563866	5:-20451746	MsaT026328.1:intron
AGACCTTGGTTTCAATTACA+CGG	0.567331	5:+20451865	None:intergenic
TGGAGAAGTCTCTTGAAACT+GGG	0.575456	5:-20451893	MsaT026328.1:CDS
CTTGCAGGGAAGGCAACTGA+TGG	0.581631	5:-20447390	MsaT026328.1:intron
CAACTGTTCTAGATTGAGCA+AGG	0.640451	5:-20451997	MsaT026328.1:CDS
GTTAACGACTCCTGGAGGAG+AGG	0.646824	5:-20441836	MsaT026328.1:intron
GGGCCGTGTAATTGAAACCA+AGG	0.647098	5:-20451868	MsaT026328.1:intron
CCAACCTGCAACTCTAGCGA+CGG	0.655662	5:+20452846	None:intergenic
AGATTGAAAACGCAACGGCG+AGG	0.667280	5:-20454537	MsaT026328.1:CDS
AAAGAAGATTGAAAACGCAA+CGG	0.680027	5:-20454542	MsaT026328.1:CDS
TAAGAGTTAACGACTCCTGG+AGG	0.696049	5:-20441841	MsaT026328.1:intron
AGGAGTTGAATATGAGAACG+TGG	0.723449	5:-20447080	MsaT026328.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	20441180	20454587	20441180	ID=MsaG026328
Chr5	mRNA	20441180	20454587	20441180	ID=MsaT026328.1;Parent=MsaG026328
Chr5	exon	20441180	20441191	20441180	ID=MsaT026328.1.exon9;Parent=MsaT026328.1
Chr5	CDS	20441180	20441191	20441180	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20441837	20441859	20441837	ID=MsaT026328.1.exon8;Parent=MsaT026328.1
Chr5	CDS	20441837	20441859	20441837	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20447068	20447134	20447068	ID=MsaT026328.1.exon7;Parent=MsaT026328.1
Chr5	CDS	20447068	20447134	20447068	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20447364	20447405	20447364	ID=MsaT026328.1.exon6;Parent=MsaT026328.1
Chr5	CDS	20447364	20447405	20447364	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20451747	20451788	20451747	ID=MsaT026328.1.exon5;Parent=MsaT026328.1
Chr5	CDS	20451747	20451788	20451747	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20451869	20451935	20451869	ID=MsaT026328.1.exon4;Parent=MsaT026328.1
Chr5	CDS	20451869	20451935	20451869	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20451969	20452033	20451969	ID=MsaT026328.1.exon3;Parent=MsaT026328.1
Chr5	CDS	20451969	20452033	20451969	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20452851	20452929	20452851	ID=MsaT026328.1.exon2;Parent=MsaT026328.1
Chr5	CDS	20452851	20452929	20452851	ID=cds.MsaT026328.1;Parent=MsaT026328.1
Chr5	exon	20454406	20454587	20454406	ID=MsaT026328.1.exon1;Parent=MsaT026328.1
Chr5	CDS	20454406	20454587	20454406	ID=cds.MsaT026328.1;Parent=MsaT026328.1

Gene Sequence

>MsaT026328.1

ATGGCTCGTGAGAAGATTCAGATAAAGAAGATTGAAAACGCAACGGCGAGGCAAGTGACTTTTTCAAAGAGAAGAAGAGGATTAATCAAAAAGGCTGAAGAACTCTCAGTTTTGTGTGATGCTGATGTTGCTCTCATTATTTTCTCTTCTACCGGCAAGCTCTTTGAATACTCTAACTTAAGCATGAGGGAAATACTTGAAAGACATCATTTGCACTCAAATAATCTTGCAAAGCTCGAAGAACCGTCGCTAGAGTTGCAGCTAGTTGAAAACAGCAACTGTTCTAGATTGAGCAAGGAAGTTGCTCAGAAAAGCCATCAATTAAGTCTGGAAGAATTACAACAATTGGAGAAGTCTCTTGAAACTGGGTTGGGCCGTGTAATTGAAACCAAGGGAGAGAAGATTATGATGGAGATCAATGAGCTACAAACAAAGGGAAGGCAACTGATGGAAGAGAACAACCGACTAAAACGACATGTGACGGACATGTTTAACGGTAAAAGTCTTGGAGGAGTTGAATATGAGAACGTGGTCACTGAAGAAGAGTTAACGACTCCTGGAGGAGAGGCGTTGGTCTAG

Protein sequence

>MsaT026328.1

MAREKIQIKKIENATARQVTFSKRRRGLIKKAEELSVLCDADVALIIFSSTGKLFEYSNLSMREILERHHLHSNNLAKLEEPSLELQLVENSNCSRLSKEVAQKSHQLSLEELQQLEKSLETGLGRVIETKGEKIMMEINELQTKGRQLMEENNRLKRHVTDMFNGKSLGGVEYENVVTEEELTTPGGEALV*