AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG026784

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026784 MtrunA17_Chr5g0418191 93.103 435 27 3 1 434 1 433 0.0 831
MsaG026784 MtrunA17_Chr4g0042831 54.545 451 112 11 13 433 1 388 1.63e-141 409
MsaG026784 MtrunA17_Chr7g0218081 49.414 512 154 14 21 433 14 519 4.05e-141 413
MsaG026784 MtrunA17_Chr5g0445311 47.788 339 145 10 109 430 155 478 2.80e-82 263
MsaG026784 MtrunA17_Chr7g0263531 40.299 402 190 10 24 398 60 438 9.20e-82 258
MsaG026784 MtrunA17_Chr3g0101131 51.064 282 121 6 145 415 235 510 7.72e-81 260
MsaG026784 MtrunA17_Chr3g0079691 43.236 377 140 10 113 416 230 605 3.21e-80 261
MsaG026784 MtrunA17_Chr3g0106491 45.110 317 154 6 79 389 132 434 1.39e-77 249
MsaG026784 MtrunA17_Chr7g0243891 53.629 248 99 5 150 394 213 447 2.06e-77 250
MsaG026784 MtrunA17_Chr7g0249311 48.239 284 100 5 150 387 176 458 6.74e-75 246
MsaG026784 MtrunA17_Chr7g0249311 45.349 86 46 1 321 406 179 263 5.52e-15 77.4
MsaG026784 MtrunA17_Chr5g0432161 51.894 264 93 7 148 389 239 490 7.73e-75 244
MsaG026784 MtrunA17_Chr4g0004911 48.736 277 110 8 108 383 153 398 2.13e-71 233
MsaG026784 MtrunA17_Chr7g0249301 43.581 296 105 7 150 383 59 354 1.45e-65 214
MsaG026784 MtrunA17_Chr5g0447701 39.852 271 134 6 135 397 75 324 7.33e-50 174
MsaG026784 MtrunA17_Chr4g0074001 39.759 249 138 6 144 383 176 421 1.57e-48 173
MsaG026784 MtrunA17_Chr4g0074001 56.250 64 27 1 154 216 360 423 2.73e-16 80.9
MsaG026784 MtrunA17_Chr1g0188941 65.854 82 28 0 299 380 29 110 2.00e-35 127
MsaG026784 MtrunA17_Chr1g0188941 54.839 62 27 1 153 213 51 112 2.89e-18 80.1
MsaG026784 MtrunA17_Chr5g0447711 30.712 267 164 4 121 387 51 296 6.26e-33 126
MsaG026784 MtrunA17_Chr1g0194481 50.877 114 56 0 267 380 104 217 2.44e-32 125
MsaG026784 MtrunA17_Chr1g0194481 58.065 62 23 2 153 213 158 217 8.26e-16 78.2
MsaG026784 MtrunA17_Chr4g0051881 43.056 144 76 1 261 404 118 255 1.48e-31 123
MsaG026784 MtrunA17_Chr4g0051881 60.000 60 23 1 153 211 178 237 2.53e-16 79.7
MsaG026784 MtrunA17_Chr7g0270191 61.176 85 33 0 306 390 130 214 4.90e-30 118
MsaG026784 MtrunA17_Chr7g0270191 61.290 62 21 2 153 213 145 204 1.47e-16 80.1
MsaG026784 MtrunA17_Chr2g0294231 65.789 76 26 0 306 381 188 263 9.69e-29 116
MsaG026784 MtrunA17_Chr2g0294231 60.000 60 23 1 153 211 203 262 1.54e-15 77.8
MsaG026784 MtrunA17_Chr8g0335811 60.241 83 32 1 304 386 137 218 2.01e-28 112
MsaG026784 MtrunA17_Chr8g0335811 63.793 58 18 2 153 208 154 210 1.63e-16 78.6
MsaG026784 MtrunA17_Chr3g0129361 62.162 74 28 0 304 377 127 200 2.57e-28 111
MsaG026784 MtrunA17_Chr3g0129361 50.000 78 33 3 153 228 144 217 6.79e-15 73.6
MsaG026784 MtrunA17_Chr5g0443131 62.667 75 28 0 307 381 143 217 3.15e-28 113
MsaG026784 MtrunA17_Chr5g0443131 58.333 60 24 1 153 211 157 216 4.95e-16 78.6
MsaG026784 MtrunA17_Chr5g0418781 48.649 111 48 1 267 377 79 180 1.40e-26 108
MsaG026784 MtrunA17_Chr5g0418781 58.621 58 23 1 153 209 124 181 7.38e-15 74.7
MsaG026784 MtrunA17_Chr8g0383351 61.333 75 28 1 304 377 142 216 1.81e-26 106
MsaG026784 MtrunA17_Chr8g0383351 46.739 92 42 4 138 226 144 231 2.98e-15 75.1
MsaG026784 MtrunA17_Chr7g0224801 62.162 74 26 1 311 384 83 154 6.63e-26 103
MsaG026784 MtrunA17_Chr7g0224801 56.140 57 24 1 153 208 93 149 1.78e-15 73.9
MsaG026784 MtrunA17_Chr8g0386241 48.315 89 46 0 304 392 86 174 4.92e-25 101
MsaG026784 MtrunA17_Chr8g0386241 44.304 79 42 2 153 230 103 180 6.25e-14 70.1
MsaG026784 MtrunA17_Chr8g0383251 56.164 73 32 0 308 380 95 167 3.69e-24 99.0
MsaG026784 MtrunA17_Chr8g0383251 53.333 60 27 1 153 211 108 167 5.86e-13 67.0
MsaG026784 MtrunA17_Chr7g0248721 46.729 107 42 2 271 377 105 196 5.41e-24 99.4
MsaG026784 MtrunA17_Chr7g0248721 47.619 84 38 3 140 222 128 206 4.06e-15 74.3
MsaG026784 MtrunA17_Chr6g0485431 57.333 75 31 1 307 380 140 214 7.41e-24 102
MsaG026784 MtrunA17_Chr6g0485431 40.816 98 52 4 122 217 127 220 1.21e-13 72.0
MsaG026784 MtrunA17_Chr3g0129321 52.000 75 36 0 307 381 104 178 1.27e-23 98.2
MsaG026784 MtrunA17_Chr3g0129321 53.333 60 27 1 153 211 118 177 5.84e-14 70.5
MsaG026784 MtrunA17_Chr4g0068541 55.405 74 33 0 308 381 195 268 2.38e-23 101
MsaG026784 MtrunA17_Chr4g0068541 61.667 60 22 1 153 211 208 267 2.78e-16 80.5
MsaG026784 MtrunA17_Chr1g0189391 50.538 93 44 2 308 398 84 176 9.88e-23 98.6
MsaG026784 MtrunA17_Chr1g0189391 45.455 77 39 3 153 227 97 172 7.24e-12 66.2
MsaG026784 MtrunA17_Chr3g0099641 48.780 82 41 1 300 380 230 311 1.07e-22 100
MsaG026784 MtrunA17_Chr3g0099641 35.294 136 79 4 95 223 190 323 3.32e-15 77.4
MsaG026784 MtrunA17_Chr1g0150801 54.286 70 32 0 308 377 89 158 1.31e-22 94.0
MsaG026784 MtrunA17_Chr1g0150801 54.386 57 25 1 153 208 102 158 5.36e-13 66.6
MsaG026784 MtrunA17_Chr7g0270831 52.564 78 36 1 308 384 203 280 9.31e-22 97.1
MsaG026784 MtrunA17_Chr7g0270831 51.667 60 27 2 154 211 217 276 1.87e-12 68.9
MsaG026784 MtrunA17_Chr2g0288871 45.455 88 47 1 294 380 278 365 1.08e-21 97.4
MsaG026784 MtrunA17_Chr2g0288871 51.667 60 27 2 154 211 306 365 1.34e-12 69.7
MsaG026784 MtrunA17_Chr4g0025061 49.383 81 40 1 303 382 342 422 2.23e-21 96.7
MsaG026784 MtrunA17_Chr4g0025061 36.458 96 59 2 154 247 361 456 1.75e-11 66.2
MsaG026784 MtrunA17_Chr2g0322391 46.067 89 47 1 295 382 323 411 2.93e-21 96.3
MsaG026784 MtrunA17_Chr2g0322391 49.180 61 29 2 153 211 349 409 1.05e-11 67.0
MsaG026784 MtrunA17_Chr4g0051181 48.315 89 41 2 298 381 216 304 3.29e-21 95.9
MsaG026784 MtrunA17_Chr4g0051181 39.216 102 55 4 117 211 202 303 9.79e-14 72.8
MsaG026784 MtrunA17_Chr4g0075201 47.619 84 43 1 300 382 246 329 3.52e-21 95.9
MsaG026784 MtrunA17_Chr4g0075201 49.180 61 29 2 153 211 267 327 4.81e-12 67.8
MsaG026784 MtrunA17_Chr4g0060271 52.703 74 34 1 308 380 242 315 4.43e-21 95.9
MsaG026784 MtrunA17_Chr4g0060271 50.746 67 30 3 148 211 249 315 1.14e-13 73.2
MsaG026784 MtrunA17_Chr7g0216891 39.496 119 70 2 260 377 159 276 5.54e-21 95.5
MsaG026784 MtrunA17_Chr7g0216891 52.459 61 25 3 153 210 219 278 4.73e-12 67.8
MsaG026784 MtrunA17_Chr5g0432071 64.407 59 21 0 153 211 104 162 9.02e-21 90.1
MsaG026784 MtrunA17_Chr5g0432071 53.226 62 28 1 321 382 104 164 2.66e-15 74.7
MsaG026784 MtrunA17_Chr1g0147881 55.556 81 32 2 303 382 247 324 1.12e-20 92.8
MsaG026784 MtrunA17_Chr1g0147881 50.725 69 31 3 144 210 254 321 7.25e-13 69.3
MsaG026784 MtrunA17_Chr1g0188961 56.579 76 19 1 341 416 3 64 1.31e-20 85.1
MsaG026784 MtrunA17_Chr7g0238921 62.712 59 22 0 319 377 122 180 2.17e-20 91.3
MsaG026784 MtrunA17_Chr7g0238921 45.455 99 48 3 115 208 83 180 8.79e-15 75.1
MsaG026784 MtrunA17_Chr2g0302391 46.237 93 46 2 308 399 198 287 5.64e-20 91.7
MsaG026784 MtrunA17_Chr2g0302391 51.667 60 27 2 154 211 212 271 6.37e-13 70.1
MsaG026784 MtrunA17_Chr2g0333851 56.250 64 27 1 319 381 167 230 7.50e-20 89.7
MsaG026784 MtrunA17_Chr2g0333851 51.667 60 27 2 154 211 170 229 1.67e-12 68.2
MsaG026784 MtrunA17_Chr3g0136961 36.735 147 61 6 255 377 57 195 1.19e-19 89.0
MsaG026784 MtrunA17_Chr3g0136961 45.333 75 39 2 136 208 121 195 6.70e-14 72.0
MsaG026784 MtrunA17_Chr4g0025051 41.667 108 55 3 279 381 292 396 1.51e-19 91.3
MsaG026784 MtrunA17_Chr5g0401821 50.685 73 35 1 318 389 196 268 6.03e-19 86.3
MsaG026784 MtrunA17_Chr5g0401821 46.575 73 37 2 140 210 186 258 3.18e-13 69.7
MsaG026784 MtrunA17_Chr4g0053281 56.061 66 28 1 318 382 263 328 2.35e-18 85.9
MsaG026784 MtrunA17_Chr4g0053281 54.688 64 26 3 149 210 263 325 3.09e-14 73.6
MsaG026784 MtrunA17_Chr4g0071521 45.745 94 39 3 285 377 220 302 2.42e-18 85.5
MsaG026784 MtrunA17_Chr4g0071521 47.761 67 32 3 144 208 237 302 7.03e-12 66.2
MsaG026784 MtrunA17_Chr1g0150281 49.315 73 34 2 308 377 125 197 2.76e-18 84.7
MsaG026784 MtrunA17_Chr1g0150281 52.632 57 25 2 154 208 141 197 1.79e-13 70.5
MsaG026784 MtrunA17_Chr2g0284321 36.800 125 66 5 151 270 33 149 4.07e-18 82.8
MsaG026784 MtrunA17_Chr2g0284321 43.478 92 50 2 322 412 36 126 1.01e-17 81.6
MsaG026784 MtrunA17_Chr4g0024391 31.333 150 83 4 240 382 155 291 9.85e-18 85.1
MsaG026784 MtrunA17_Chr8g0379461 51.515 66 31 1 322 386 77 142 1.18e-17 82.0
MsaG026784 MtrunA17_Chr8g0379461 49.206 63 30 2 151 211 74 136 3.10e-13 69.3
MsaG026784 MtrunA17_Chr4g0001361 53.968 63 28 1 319 380 160 222 1.47e-17 83.2
MsaG026784 MtrunA17_Chr4g0001361 53.333 60 26 2 154 211 163 222 8.71e-14 72.0
MsaG026784 MtrunA17_Chr7g0270051 50.000 70 34 1 322 390 54 123 2.30e-17 81.6
MsaG026784 MtrunA17_Chr7g0270051 47.826 69 32 3 154 220 54 120 1.83e-11 64.3
MsaG026784 MtrunA17_Chr1g0188971 49.367 79 39 1 264 341 4 82 6.70e-17 75.5
MsaG026784 MtrunA17_Chr2g0289181 49.351 77 38 1 310 385 3 79 7.10e-17 79.7
MsaG026784 MtrunA17_Chr2g0289181 52.174 69 31 2 149 215 10 78 1.71e-14 72.8
MsaG026784 MtrunA17_Chr7g0248691 39.823 113 65 3 272 383 107 217 1.01e-16 80.9
MsaG026784 MtrunA17_Chr1g0184691 52.113 71 32 2 318 386 290 360 1.09e-16 81.3
MsaG026784 MtrunA17_Chr1g0184691 54.839 62 25 3 149 208 290 350 1.75e-12 68.6
MsaG026784 MtrunA17_Chr2g0293481 46.341 82 40 2 322 402 268 346 2.31e-16 80.9
MsaG026784 MtrunA17_Chr2g0293481 48.333 60 29 2 154 211 268 327 7.76e-11 63.9
MsaG026784 MtrunA17_Chr6g0468181 61.818 55 21 0 163 217 12 66 2.73e-16 74.7
MsaG026784 MtrunA17_Chr7g0228941 50.820 61 29 1 318 377 49 109 4.65e-16 74.3
MsaG026784 MtrunA17_Chr7g0228941 48.529 68 32 3 144 209 44 110 1.67e-13 67.0
MsaG026784 MtrunA17_Chr2g0319961 49.231 65 32 1 322 385 81 145 5.26e-16 77.8
MsaG026784 MtrunA17_Chr2g0319961 48.485 66 32 2 151 214 78 143 1.40e-13 70.5
MsaG026784 MtrunA17_Chr1g0150271 45.714 70 37 1 312 380 92 161 5.44e-16 77.4
MsaG026784 MtrunA17_Chr1g0150271 34.483 116 69 3 154 262 102 217 6.28e-14 71.6
MsaG026784 MtrunA17_Chr8g0348311 36.792 106 64 3 276 380 112 215 7.84e-16 78.2
MsaG026784 MtrunA17_Chr8g0387501 51.613 62 29 1 320 380 128 189 9.84e-16 77.0
MsaG026784 MtrunA17_Chr8g0387501 45.833 72 35 3 148 217 124 193 2.34e-12 67.0
MsaG026784 MtrunA17_Chr1g0202461 45.946 74 38 2 308 380 249 321 2.65e-15 77.4
MsaG026784 MtrunA17_Chr1g0202461 42.647 68 37 2 146 211 254 321 3.01e-11 64.7
MsaG026784 MtrunA17_Chr3g0139021 43.243 74 41 1 306 378 299 372 1.31e-14 75.1
MsaG026784 MtrunA17_Chr3g0139021 47.761 67 32 3 144 208 306 371 2.22e-11 65.5
MsaG026784 MtrunA17_Chr5g0419241 46.000 50 27 0 298 347 54 103 8.53e-13 64.7
MsaG026784 MtrunA17_Chr3g0126391 46.479 71 33 3 140 206 121 190 1.84e-12 68.2
MsaG026784 MtrunA17_Chr3g0126391 39.560 91 49 3 320 407 132 219 6.16e-12 66.6
MsaG026784 MtrunA17_Chr8g0387981 51.724 58 25 1 321 375 132 189 3.87e-12 67.4
MsaG026784 MtrunA17_Chr8g0387981 49.206 63 28 2 148 206 127 189 1.46e-11 65.5
MsaG026784 MtrunA17_Chr2g0315361 48.333 60 28 1 319 375 146 205 2.79e-11 64.3
MsaG026784 MtrunA17_Chr8g0347251 43.836 73 32 3 152 215 135 207 4.91e-11 63.9
MsaG026784 MtrunA17_Chr7g0275531 45.714 70 32 3 153 216 118 187 5.68e-11 63.5
MsaG026784 MtrunA17_Chr7g0275531 45.763 59 29 1 320 375 117 175 9.97e-11 62.8
MsaG026784 MtrunA17_Chr2g0315381 48.333 60 28 1 319 375 142 201 7.85e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026784 AT1G13960.1 50.000 526 150 20 8 434 3 514 3.70e-130 385
MsaG026784 AT2G03340.1 54.167 408 116 10 71 434 133 513 3.71e-130 385
MsaG026784 AT2G03340.1 65.957 47 12 2 24 66 20 66 8.07e-11 64.3
MsaG026784 AT1G13960.2 57.867 375 108 12 96 434 1 361 1.61e-120 355
MsaG026784 AT3G01080.2 43.633 479 168 17 22 434 18 460 2.73e-93 289
MsaG026784 AT3G01080.1 44.743 447 171 15 22 434 18 422 6.99e-91 281
MsaG026784 AT5G56270.1 48.667 300 108 4 130 383 250 549 8.28e-80 260
MsaG026784 AT2G38470.1 53.558 267 92 7 150 396 181 435 5.80e-79 254
MsaG026784 AT4G26640.5 52.846 246 96 4 152 386 34 270 6.91e-77 244
MsaG026784 AT4G26640.5 48.718 78 39 1 135 211 187 264 2.52e-15 77.8
MsaG026784 AT4G26640.6 52.846 246 96 4 152 386 34 270 6.91e-77 244
MsaG026784 AT4G26640.6 48.718 78 39 1 135 211 187 264 2.52e-15 77.8
MsaG026784 AT4G26640.4 52.846 246 96 4 152 386 34 270 6.91e-77 244
MsaG026784 AT4G26640.4 48.718 78 39 1 135 211 187 264 2.52e-15 77.8
MsaG026784 AT4G26640.3 52.846 246 96 4 152 386 34 270 6.91e-77 244
MsaG026784 AT4G26640.3 48.718 78 39 1 135 211 187 264 2.52e-15 77.8
MsaG026784 AT4G26640.1 52.846 246 96 4 152 386 138 374 3.20e-76 246
MsaG026784 AT4G26640.1 48.718 78 39 1 135 211 291 368 3.71e-15 77.8
MsaG026784 AT4G26640.7 52.846 246 96 4 152 386 170 406 4.83e-76 246
MsaG026784 AT4G26640.7 51.250 80 34 3 135 211 323 400 3.51e-15 77.8
MsaG026784 AT4G26640.2 52.846 246 96 4 152 386 210 446 1.39e-75 246
MsaG026784 AT4G26640.2 48.718 78 39 1 135 211 363 440 3.74e-15 77.8
MsaG026784 AT4G26440.1 48.214 280 113 6 145 395 170 446 2.91e-75 245
MsaG026784 AT5G07100.2 48.536 239 70 3 146 383 17 203 2.77e-70 221
MsaG026784 AT5G07100.2 56.250 64 27 1 153 215 141 204 1.82e-16 78.6
MsaG026784 AT5G07100.2 48.571 70 36 0 321 390 24 93 5.95e-15 73.9
MsaG026784 AT5G07100.4 48.536 239 70 3 146 383 17 203 2.77e-70 221
MsaG026784 AT5G07100.4 56.250 64 27 1 153 215 141 204 1.82e-16 78.6
MsaG026784 AT5G07100.4 48.571 70 36 0 321 390 24 93 5.95e-15 73.9
MsaG026784 AT5G07100.5 48.536 239 70 3 146 383 17 203 2.77e-70 221
MsaG026784 AT5G07100.5 56.250 64 27 1 153 215 141 204 1.82e-16 78.6
MsaG026784 AT5G07100.5 48.571 70 36 0 321 390 24 93 5.95e-15 73.9
MsaG026784 AT5G07100.3 48.536 239 70 3 146 383 17 203 2.77e-70 221
MsaG026784 AT5G07100.3 56.250 64 27 1 153 215 141 204 1.82e-16 78.6
MsaG026784 AT5G07100.3 48.571 70 36 0 321 390 24 93 5.95e-15 73.9
MsaG026784 AT5G07100.1 48.536 239 70 3 146 383 110 296 1.47e-69 223
MsaG026784 AT5G07100.1 56.250 64 27 1 153 215 234 297 3.92e-16 79.3
MsaG026784 AT5G07100.1 40.000 95 46 1 307 390 92 186 2.11e-15 77.0
MsaG026784 AT2G37260.2 44.406 286 106 8 149 400 79 345 3.63e-64 210
MsaG026784 AT2G37260.3 44.406 286 106 8 149 400 81 347 4.22e-64 210
MsaG026784 AT2G37260.1 44.406 286 106 8 149 400 161 427 1.53e-63 211
MsaG026784 AT2G30250.1 45.200 250 123 4 137 382 150 389 2.14e-60 202
MsaG026784 AT2G04880.2 43.191 257 114 8 149 387 107 349 5.37e-59 200
MsaG026784 AT2G04880.2 45.455 99 49 2 152 247 282 378 5.37e-20 92.4
MsaG026784 AT2G04880.1 40.809 272 123 7 149 387 107 373 5.96e-58 198
MsaG026784 AT2G04880.1 45.455 99 49 2 152 247 306 402 5.75e-20 92.4
MsaG026784 AT4G12020.6 53.731 201 88 4 146 341 461 661 3.75e-55 198
MsaG026784 AT4G12020.6 49.180 61 30 1 320 380 467 526 9.20e-12 68.2
MsaG026784 AT4G12020.8 53.731 201 88 4 146 341 461 661 3.75e-55 198
MsaG026784 AT4G12020.8 49.180 61 30 1 320 380 467 526 9.20e-12 68.2
MsaG026784 AT4G12020.3 53.731 201 88 4 146 341 461 661 4.60e-55 197
MsaG026784 AT4G12020.3 49.180 61 30 1 320 380 467 526 1.00e-11 67.8
MsaG026784 AT4G12020.7 53.731 201 88 4 146 341 461 661 4.68e-55 197
MsaG026784 AT4G12020.7 49.180 61 30 1 320 380 467 526 1.05e-11 67.8
MsaG026784 AT4G12020.1 53.731 201 88 4 146 341 461 661 4.73e-55 197
MsaG026784 AT4G12020.1 49.180 61 30 1 320 380 467 526 1.04e-11 67.8
MsaG026784 AT4G12020.9 53.731 201 88 4 146 341 461 661 4.73e-55 197
MsaG026784 AT4G12020.9 49.180 61 30 1 320 380 467 526 1.04e-11 67.8
MsaG026784 AT4G12020.2 53.731 201 88 4 146 341 461 661 4.97e-55 197
MsaG026784 AT4G12020.2 49.180 61 30 1 320 380 467 526 1.04e-11 67.8
MsaG026784 AT4G12020.10 53.731 201 88 4 146 341 461 661 5.61e-55 197
MsaG026784 AT4G12020.10 49.180 61 30 1 320 380 467 526 1.04e-11 67.8
MsaG026784 AT4G12020.5 53.731 201 88 4 146 341 394 594 6.01e-55 197
MsaG026784 AT4G12020.5 49.180 61 30 1 320 380 400 459 1.18e-11 67.8
MsaG026784 AT4G12020.11 53.731 201 88 4 146 341 461 661 6.05e-55 197
MsaG026784 AT4G12020.11 49.180 61 30 1 320 380 467 526 1.38e-11 67.4
MsaG026784 AT4G12020.4 53.731 201 88 4 146 341 461 661 6.36e-55 197
MsaG026784 AT4G12020.4 49.180 61 30 1 320 380 467 526 1.11e-11 67.8
MsaG026784 AT4G30935.1 42.437 238 122 6 151 383 166 393 1.20e-48 172
MsaG026784 AT4G30935.1 56.250 64 27 1 154 216 332 395 2.14e-17 84.7
MsaG026784 AT3G01080.3 39.223 283 101 13 22 239 18 294 2.77e-37 139
MsaG026784 AT3G01080.3 58.333 60 24 1 321 380 205 263 1.59e-15 77.8
MsaG026784 AT4G18170.1 68.000 75 24 0 306 380 157 231 1.11e-30 120
MsaG026784 AT4G18170.1 58.333 60 24 1 153 211 172 231 5.03e-16 79.0
MsaG026784 AT1G29860.1 65.789 76 26 0 306 381 121 196 1.88e-30 119
MsaG026784 AT1G29860.1 58.333 60 24 1 153 211 136 195 5.80e-16 78.2
MsaG026784 AT5G46350.1 62.338 77 29 0 307 383 169 245 8.02e-29 115
MsaG026784 AT5G46350.1 54.545 66 28 2 153 217 183 247 4.19e-15 76.6
MsaG026784 AT2G44745.1 59.036 83 33 1 304 386 128 209 2.11e-28 112
MsaG026784 AT2G44745.1 57.971 69 25 3 153 219 145 211 1.56e-16 78.6
MsaG026784 AT2G47260.1 64.000 75 27 0 306 380 159 233 2.35e-28 114
MsaG026784 AT2G47260.1 58.333 60 24 1 153 211 174 233 2.63e-15 77.0
MsaG026784 AT4G39410.1 64.865 74 26 0 304 377 206 279 2.84e-28 114
MsaG026784 AT4G39410.1 49.333 75 35 2 136 208 206 279 2.54e-13 70.9
MsaG026784 AT1G69310.4 47.826 115 53 1 263 377 96 203 2.45e-27 110
MsaG026784 AT1G69310.4 60.345 58 22 1 153 209 147 204 7.91e-16 78.2
MsaG026784 AT1G69310.2 47.826 115 53 1 263 377 96 203 2.45e-27 110
MsaG026784 AT1G69310.2 60.345 58 22 1 153 209 147 204 7.91e-16 78.2
MsaG026784 AT1G69310.1 47.826 115 53 1 263 377 96 203 2.45e-27 110
MsaG026784 AT1G69310.1 60.345 58 22 1 153 209 147 204 7.91e-16 78.2
MsaG026784 AT5G13080.1 54.878 82 37 0 308 389 54 135 2.83e-27 106
MsaG026784 AT5G13080.1 54.386 57 25 1 153 208 67 123 3.40e-15 72.8
MsaG026784 AT5G49520.1 62.667 75 28 0 306 380 206 280 8.97e-27 111
MsaG026784 AT5G49520.1 58.333 60 24 1 153 211 221 280 3.66e-15 77.4
MsaG026784 AT1G64000.1 38.650 163 91 3 220 377 12 170 1.16e-26 106
MsaG026784 AT1G64000.1 49.333 75 35 2 136 208 97 170 1.44e-15 75.5
MsaG026784 AT5G41570.1 63.380 71 26 0 307 377 84 154 1.22e-26 105
MsaG026784 AT5G41570.1 54.839 62 25 2 149 208 94 154 5.48e-14 70.5
MsaG026784 AT3G01970.1 57.317 82 35 0 308 389 52 133 1.60e-26 104
MsaG026784 AT3G01970.1 52.381 63 29 1 153 214 65 127 2.41e-15 73.6
MsaG026784 AT1G55600.1 57.303 89 38 0 294 382 280 368 2.80e-25 108
MsaG026784 AT1G55600.1 57.377 61 23 2 153 211 307 366 1.59e-13 72.8
MsaG026784 AT5G26170.1 58.571 70 29 0 308 377 100 169 4.25e-25 101
MsaG026784 AT5G26170.1 52.459 61 28 1 153 212 113 173 3.65e-14 70.9
MsaG026784 AT2G46130.1 60.563 71 28 0 307 377 16 86 5.04e-25 99.4
MsaG026784 AT2G46130.1 58.621 58 23 1 152 208 29 86 1.41e-15 72.8
MsaG026784 AT3G62340.1 62.162 74 28 0 307 380 104 177 5.27e-25 103
MsaG026784 AT3G62340.1 58.333 60 24 1 153 211 118 177 7.95e-15 75.1
MsaG026784 AT4G04450.2 45.370 108 58 1 300 406 177 284 1.23e-24 105
MsaG026784 AT4G04450.2 51.667 60 27 2 154 211 199 258 8.03e-13 70.5
MsaG026784 AT4G04450.1 45.370 108 58 1 300 406 271 378 4.50e-24 105
MsaG026784 AT2G21900.1 50.000 76 35 1 310 382 95 170 6.54e-23 96.3
MsaG026784 AT2G21900.1 41.053 95 55 1 144 237 100 194 1.10e-14 73.2
MsaG026784 AT1G69310.3 45.217 115 52 2 263 377 96 199 2.03e-22 97.1
MsaG026784 AT1G69310.3 55.172 58 21 2 153 209 147 200 3.19e-11 64.3
MsaG026784 AT5G64810.1 52.113 71 34 0 308 378 97 167 6.69e-22 93.2
MsaG026784 AT5G64810.1 50.000 60 25 2 153 209 110 167 1.51e-11 63.9
MsaG026784 AT1G62300.1 49.398 83 41 1 299 380 290 372 7.53e-22 98.6
MsaG026784 AT1G62300.1 39.394 99 54 4 119 211 274 372 4.47e-13 71.6
MsaG026784 AT4G22070.4 46.591 88 46 1 294 380 270 357 9.36e-22 98.2
MsaG026784 AT4G22070.4 51.667 60 27 2 154 211 298 357 1.33e-12 70.1
MsaG026784 AT4G22070.3 46.591 88 46 1 294 380 270 357 9.36e-22 98.2
MsaG026784 AT4G22070.3 51.667 60 27 2 154 211 298 357 1.33e-12 70.1
MsaG026784 AT4G22070.2 46.591 88 46 1 294 380 270 357 9.36e-22 98.2
MsaG026784 AT4G22070.2 51.667 60 27 2 154 211 298 357 1.33e-12 70.1
MsaG026784 AT4G22070.1 46.591 88 46 1 294 380 270 357 9.36e-22 98.2
MsaG026784 AT4G22070.1 51.667 60 27 2 154 211 298 357 1.33e-12 70.1
MsaG026784 AT5G15130.2 47.561 82 42 1 304 384 168 249 8.33e-21 95.1
MsaG026784 AT5G15130.2 51.613 62 26 3 153 211 185 245 1.14e-12 70.1
MsaG026784 AT5G15130.1 47.561 82 42 1 304 384 210 291 9.10e-21 95.1
MsaG026784 AT5G15130.1 51.613 62 26 3 153 211 227 287 1.25e-12 70.1
MsaG026784 AT1G68150.1 51.282 78 37 1 308 384 222 299 2.06e-20 92.8
MsaG026784 AT1G68150.1 36.752 117 65 4 98 211 185 295 3.20e-14 74.3
MsaG026784 AT2G46130.2 56.338 71 27 1 307 377 16 82 2.36e-20 86.3
MsaG026784 AT2G46130.2 53.448 58 22 2 152 208 29 82 5.05e-11 59.7
MsaG026784 AT1G18860.1 51.282 78 37 1 304 380 222 299 3.08e-20 93.6
MsaG026784 AT2G25000.2 42.222 90 51 1 294 382 76 165 4.13e-20 89.4
MsaG026784 AT2G25000.2 33.333 120 66 5 154 262 104 220 2.99e-11 63.5
MsaG026784 AT2G25000.4 42.222 90 51 1 294 382 76 165 4.13e-20 89.4
MsaG026784 AT2G25000.4 33.333 120 66 5 154 262 104 220 2.99e-11 63.5
MsaG026784 AT2G25000.3 42.222 90 51 1 294 382 98 187 7.18e-20 89.0
MsaG026784 AT2G25000.3 33.333 120 66 5 154 262 126 242 5.67e-11 63.2
MsaG026784 AT2G25000.1 42.222 90 51 1 294 382 119 208 1.10e-19 89.0
MsaG026784 AT2G25000.1 33.333 120 66 5 154 262 147 263 6.69e-11 63.2
MsaG026784 AT5G43290.1 44.792 96 41 1 294 377 75 170 7.42e-19 86.7
MsaG026784 AT5G43290.1 53.846 78 25 3 152 218 113 190 2.36e-15 76.3
MsaG026784 AT4G31550.1 51.190 84 37 2 303 385 231 311 7.44e-19 87.4
MsaG026784 AT4G31550.1 54.839 62 25 3 149 208 243 303 2.18e-12 68.2
MsaG026784 AT4G31550.2 51.190 84 37 2 303 385 230 310 7.56e-19 87.4
MsaG026784 AT4G31550.2 54.839 62 25 3 149 208 242 302 2.14e-12 68.2
MsaG026784 AT1G80840.1 53.125 64 29 1 319 381 144 207 7.61e-19 87.0
MsaG026784 AT1G80840.1 50.820 61 28 2 154 212 147 207 1.51e-13 71.6
MsaG026784 AT4G23550.1 40.206 97 57 1 288 383 107 203 8.09e-19 87.0
MsaG026784 AT4G23550.1 34.667 150 83 5 76 211 52 200 1.10e-11 65.9
MsaG026784 AT4G31800.2 52.113 71 32 2 314 382 103 173 8.64e-19 85.9
MsaG026784 AT4G31800.2 49.180 61 29 2 154 212 112 172 1.05e-12 68.2
MsaG026784 AT4G31800.1 52.113 71 32 2 314 382 168 238 1.53e-18 86.3
MsaG026784 AT4G31800.1 49.180 61 29 2 154 212 177 237 1.55e-12 68.6
MsaG026784 AT4G01720.1 50.000 74 36 1 308 380 226 299 2.97e-18 87.4
MsaG026784 AT4G01720.1 41.463 82 46 2 132 211 218 299 3.90e-12 68.6
MsaG026784 AT2G30590.1 58.065 62 25 1 317 377 309 370 1.10e-17 84.7
MsaG026784 AT2G30590.1 52.941 68 28 4 148 212 309 375 3.70e-13 71.2
MsaG026784 AT2G23320.1 57.143 63 26 1 318 379 237 299 1.10e-17 84.0
MsaG026784 AT2G23320.1 53.125 64 27 3 149 210 237 299 8.47e-13 69.3
MsaG026784 AT4G24240.1 54.688 64 28 1 317 379 277 340 5.96e-17 82.4
MsaG026784 AT4G24240.1 50.725 69 31 3 144 210 273 340 9.74e-14 72.8
MsaG026784 AT4G01250.1 55.556 63 27 1 319 380 126 188 1.01e-16 80.9
MsaG026784 AT4G01250.1 33.333 126 75 4 154 277 129 247 1.43e-11 65.5
MsaG026784 AT2G24570.1 59.016 61 24 1 318 377 240 300 1.06e-16 81.3
MsaG026784 AT2G24570.1 53.968 63 26 3 149 209 240 301 1.35e-12 68.9
MsaG026784 AT5G28650.1 50.000 72 35 1 318 388 259 330 1.23e-16 81.3
MsaG026784 AT5G28650.1 53.226 62 26 3 149 208 259 319 1.25e-11 65.9
MsaG026784 AT3G04670.1 50.000 72 35 1 318 388 259 330 1.93e-16 80.5
MsaG026784 AT3G04670.1 51.613 62 27 3 149 208 259 319 1.05e-11 66.2
MsaG026784 AT5G52830.1 45.556 90 46 3 308 396 153 240 2.97e-16 80.1
MsaG026784 AT5G52830.1 48.485 66 30 3 154 217 166 229 3.35e-11 64.7
MsaG026784 AT1G30650.1 39.604 101 42 2 322 403 218 318 3.18e-16 80.9
MsaG026784 AT1G30650.1 50.000 60 28 2 154 211 218 277 3.47e-11 65.1
MsaG026784 AT3G58710.2 34.746 118 67 2 281 388 21 138 4.37e-16 78.6
MsaG026784 AT3G58710.2 44.286 70 37 2 151 218 68 137 5.95e-12 66.2
MsaG026784 AT3G58710.1 36.134 119 65 2 281 388 21 139 5.51e-16 78.2
MsaG026784 AT3G58710.1 44.286 70 37 2 151 218 69 138 5.74e-12 66.2
MsaG026784 AT1G29280.1 53.333 60 27 1 322 380 75 134 5.77e-16 77.8
MsaG026784 AT1G29280.1 49.206 63 30 2 151 211 72 134 1.51e-12 67.8
MsaG026784 AT2G34830.1 50.794 63 30 1 322 383 216 278 7.30e-16 79.7
MsaG026784 AT2G34830.1 48.333 60 29 2 154 211 216 275 7.66e-11 64.3
MsaG026784 AT2G34830.2 50.794 63 30 1 322 383 225 287 7.39e-16 79.7
MsaG026784 AT2G34830.2 48.333 60 29 2 154 211 225 284 8.29e-11 63.9
MsaG026784 AT1G69810.2 41.489 94 51 3 304 395 128 219 8.18e-16 78.6
MsaG026784 AT1G69810.2 45.455 66 33 2 149 211 141 206 1.83e-11 65.5
MsaG026784 AT1G69810.1 43.333 90 47 3 308 395 190 277 1.26e-15 78.6
MsaG026784 AT1G69810.1 45.455 66 33 2 149 211 199 264 2.04e-11 65.9
MsaG026784 AT5G45050.4 50.794 63 30 1 322 383 1042 1104 8.28e-15 77.4
MsaG026784 AT5G45050.1 50.794 63 30 1 322 383 1181 1243 8.60e-15 77.4
MsaG026784 AT5G45050.2 50.794 63 30 1 322 383 1153 1215 8.78e-15 77.4
MsaG026784 AT2G40740.1 51.562 64 27 2 147 206 167 230 1.75e-14 74.3
MsaG026784 AT2G40740.3 51.562 64 27 2 147 206 176 239 2.40e-14 73.9
MsaG026784 AT1G66560.1 51.724 58 25 1 321 375 103 160 4.03e-13 69.3
MsaG026784 AT2G46400.1 36.607 112 59 3 267 375 59 161 1.58e-12 68.6
MsaG026784 AT4G11070.2 37.500 112 55 5 127 229 89 194 1.93e-12 67.8
MsaG026784 AT4G11070.1 37.500 112 55 5 127 229 121 226 2.73e-12 67.8
MsaG026784 AT3G56400.1 39.024 82 43 2 313 387 112 193 3.27e-12 67.4
MsaG026784 AT5G24110.1 43.243 74 37 3 137 206 98 170 7.90e-12 66.2
MsaG026784 AT4G23810.1 43.662 71 35 3 140 206 146 215 9.07e-12 66.2
MsaG026784 AT5G45260.1 43.137 102 44 7 122 216 1179 1273 2.11e-11 66.6
MsaG026784 AT5G45260.1 32.258 155 84 6 233 383 1136 1273 6.36e-11 65.1

Find 113 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGTTGCTTGACTAGATTC+AGG 0.247870 5:-28770042 None:intergenic
TAGGAAAACTTACCTCCTTT+TGG 0.277512 5:-28770148 None:intergenic
TATGTTGTTATGACTGCTTT+AGG 0.286428 5:-28770903 None:intergenic
GGTTATAGATGGCGAAAATA+TGG 0.304499 5:+28770524 MsaT026784.1:CDS
TTTGATCGCTTATTAGGATT+CGG 0.306605 5:-28769925 None:intergenic
GGCTACAATTGGAGGAAATA+TGG 0.308838 5:+28769757 MsaT026784.1:CDS
TATGGACAGAAAGTTGTTAA+AGG 0.320018 5:+28770542 MsaT026784.1:CDS
TAACTGTCCTGTCAAGAAAA+AGG 0.329083 5:+28769837 MsaT026784.1:CDS
AACAACCTGTTGCTCGTCTA+AGG 0.334127 5:+28771072 MsaT026784.1:CDS
ATAACCGCAATTATTTATAA+AGG 0.337197 5:+28769883 MsaT026784.1:CDS
AAGGTTGAGCGTTCACTTGC+TGG 0.337705 5:+28769856 MsaT026784.1:CDS
CCACCGGTGGTTACCGTTGC+CGG 0.343626 5:-28767546 None:intergenic
TTGATCGCTTATTAGGATTC+GGG 0.369634 5:-28769924 None:intergenic
CGGTGGTTGGTGGTGGTGAA+GGG 0.378413 5:+28767364 MsaT026784.1:CDS
GCGGTGGTTGGTGGTGGTGA+AGG 0.383918 5:+28767363 MsaT026784.1:CDS
CTTCAAATGAAAATTCAAAT+AGG 0.383970 5:+28769959 MsaT026784.1:CDS
ATTTCTGATAAGCCTAGTTT+TGG 0.384426 5:+28771020 MsaT026784.1:CDS
GCAACAGGCGAACATCTATC+TGG 0.394194 5:+28770057 MsaT026784.1:CDS
GTGGTTGGTGGTGGTGAAGG+GGG 0.394636 5:+28767366 MsaT026784.1:CDS
ACCGGTGGGTTTGATTCATC+TGG 0.396023 5:+28767561 MsaT026784.1:CDS
TAACTGTGAAGCATTATTGT+TGG 0.399399 5:-28770982 None:intergenic
CTCTCTAACTTATTTGCTGA+TGG 0.408888 5:+28767474 MsaT026784.1:CDS
GAGGAAATATGGACAGAAAC+AGG 0.418222 5:+28769768 MsaT026784.1:CDS
CATATGATGTAGGTATCCTT+TGG 0.418514 5:+28769556 MsaT026784.1:intron
CGCCGGTTCCATGGTGTCTC+CGG 0.421394 5:+28767527 MsaT026784.1:CDS
TTCAGCCTTAGACGAGCAAC+AGG 0.424679 5:-28771077 None:intergenic
CGTACGTGGCGGAAGAGTTA+AGG 0.426728 5:-28767406 None:intergenic
AAGTTAGAGAGAAGAGTCAT+AGG 0.429317 5:-28767462 None:intergenic
GTTATGCATATTAGTACTGT+TGG 0.430264 5:-28769629 None:intergenic
GGTGGTTGGTGGTGGTGAAG+GGG 0.432749 5:+28767365 MsaT026784.1:CDS
AAAACTAGGCTTATCAGAAA+TGG 0.435730 5:-28771018 None:intergenic
TTGGTAGCATTGGTATTGGC+GGG 0.437748 5:+28771039 MsaT026784.1:CDS
TGGTTGGTGGTGGTGAAGGG+GGG 0.442697 5:+28767367 MsaT026784.1:CDS
TCAGCTTCTCGCCGGTTCCA+TGG 0.442799 5:+28767518 MsaT026784.1:CDS
GAAGAAGAAGCGGTGGTTGG+TGG 0.453456 5:+28767354 MsaT026784.1:CDS
TGCCGGAGACACCATGGAAC+CGG 0.455597 5:-28767529 None:intergenic
TTAAAGGAAATCCTTATCCT+AGG 0.456816 5:+28770558 MsaT026784.1:CDS
AGAAGGCTGCAACCTTTGTT+CGG 0.460546 5:-28769704 None:intergenic
CTGTTGCTTGACTAGATTCA+GGG 0.461603 5:-28770041 None:intergenic
CTTCTTCCTTCCACGGTGGT+CGG 0.470680 5:-28767335 None:intergenic
TCCTTCTCTCAGCTTCTCGC+CGG 0.478730 5:+28767510 MsaT026784.1:CDS
GAAGTTGATCTCTTAGATGA+TGG 0.483367 5:+28770503 MsaT026784.1:CDS
CCGATGATGGCTACAATTGG+AGG 0.485258 5:+28769749 MsaT026784.1:CDS
TTCAAACTCAATGTCTAAGA+TGG 0.487664 5:+28770017 MsaT026784.1:CDS
ACAGTACTATGTGAAGTTGT+TGG 0.490613 5:-28770446 None:intergenic
CTGCCGATGATGGCTACAAT+TGG 0.491271 5:+28769746 MsaT026784.1:CDS
GAAGCATATCACCTAGGATA+AGG 0.495253 5:-28770569 None:intergenic
CCTGAATCTAGTCAAGCAAC+AGG 0.496614 5:+28770042 MsaT026784.1:CDS
TCTTAGATGATGGTTATAGA+TGG 0.497586 5:+28770513 MsaT026784.1:CDS
GCTTCTTCTTCTTCCTTCCA+CGG 0.497742 5:-28767342 None:intergenic
GTCGATAAGCCTGCCGATGA+TGG 0.498396 5:+28769736 MsaT026784.1:CDS
GAGTTGAGCCCGACTCCAAA+AGG 0.499555 5:+28770133 MsaT026784.1:CDS
TTCCATGGTGTCTCCGGCAA+CGG 0.512324 5:+28767533 MsaT026784.1:CDS
GCAGTCATAACAACATATGA+AGG 0.514254 5:+28770909 MsaT026784.1:CDS
TGGCTATTAGTCTTAGCTGC+TGG 0.515585 5:-28770951 None:intergenic
GAGAGAAGAGTCATAGGACC+AGG 0.520057 5:-28767456 None:intergenic
ATACCAATGCTACCAAAACT+AGG 0.520202 5:-28771032 None:intergenic
CCTCCAATTGTAGCCATCAT+CGG 0.527967 5:-28769749 None:intergenic
TTTGGTAGCATTGGTATTGG+CGG 0.529217 5:+28771038 MsaT026784.1:CDS
TTCGGAGAGAGGAGCATGAT+CGG 0.537950 5:-28769686 None:intergenic
GAAGAAGAAGAAGCGGTGGT+TGG 0.539314 5:+28767351 MsaT026784.1:CDS
GTGCACTTGTAATAACTTCG+AGG 0.540882 5:-28769808 None:intergenic
CTTAACTCTTCCGCCACGTA+CGG 0.541928 5:+28767407 MsaT026784.1:CDS
TCTTAGCTGCTGGAACATCA+TGG 0.545160 5:-28770941 None:intergenic
TGCAACCTTTGTTCGGAGAG+AGG 0.548420 5:-28769697 None:intergenic
AATGGACCGACCACCGTGGA+AGG 0.549974 5:+28767329 None:intergenic
CTCTCCTTTATAAATAATTG+CGG 0.550517 5:-28769887 None:intergenic
GAAGAAGCGGTGGTTGGTGG+TGG 0.551361 5:+28767357 MsaT026784.1:CDS
CAATTGTAGCCATCATCGGC+AGG 0.552856 5:-28769745 None:intergenic
GGTAGCATTGGTATTGGCGG+GGG 0.556601 5:+28771041 MsaT026784.1:CDS
TTATTTGCTGATGGAGATGA+CGG 0.559343 5:+28767483 MsaT026784.1:CDS
CCGGCAACGGTAACCACCGG+TGG 0.560156 5:+28767546 MsaT026784.1:CDS
GTTAAGGTGGGTCGCTGTGG+TGG 0.562648 5:-28767390 None:intergenic
AATGAAAATTCAAATAGGCA+AGG 0.563913 5:+28769964 MsaT026784.1:CDS
ATCTAAGAGATCAACTTCAC+TGG 0.563948 5:-28770498 None:intergenic
ATGAAAATTCAAATAGGCAA+GGG 0.564284 5:+28769965 MsaT026784.1:CDS
TTATCGACATTCAACGAAGA+AGG 0.568098 5:-28769721 None:intergenic
CAGATGATAAATGTTCGACT+TGG 0.580457 5:-28769651 None:intergenic
GGAGCATGATCGGTGGATGT+TGG 0.586815 5:-28769676 None:intergenic
ACCGGCGAGAAGCTGAGAGA+AGG 0.597313 5:-28767511 None:intergenic
ACGAGTGATAGTGAGGATGT+AGG 0.598153 5:+28770081 MsaT026784.1:CDS
GTGAAAAGTGCGTCCGTACG+TGG 0.598428 5:-28767420 None:intergenic
ACGTGGCGGAAGAGTTAAGG+TGG 0.606182 5:-28767403 None:intergenic
TGTTGCTCGTCTAAGGCTGA+AGG 0.606467 5:+28771079 MsaT026784.1:CDS
AGGACCAGGGCTAAAACCAC+CGG 0.613111 5:-28767442 None:intergenic
TGGTAGCATTGGTATTGGCG+GGG 0.613610 5:+28771040 MsaT026784.1:CDS
ATGCTCCTCTCTCCGAACAA+AGG 0.614608 5:+28769692 MsaT026784.1:CDS
TATGGACAGAAACAGGTGAA+AGG 0.615984 5:+28769775 MsaT026784.1:CDS
AGAGTTAAGGTGGGTCGCTG+TGG 0.617498 5:-28767393 None:intergenic
ATCTGGAACGAGTGATAGTG+AGG 0.619905 5:+28770074 MsaT026784.1:CDS
CATTATTGTTGGCAATAGTG+TGG 0.625832 5:-28770971 None:intergenic
TGCTTTCGAACGTTACAACT+CGG 0.628437 5:-28770858 None:intergenic
GGAGAGAGGAGCATGATCGG+TGG 0.628568 5:-28769683 None:intergenic
TACCGTTGCCGGAGACACCA+TGG 0.630265 5:-28767535 None:intergenic
ACCAGATGAATCAAACCCAC+CGG 0.631315 5:-28767562 None:intergenic
TCTCCGGCAACGGTAACCAC+CGG 0.638389 5:+28767543 MsaT026784.1:CDS
ACAGCAGCAACCACTGACAC+AGG 0.639404 5:+28769585 MsaT026784.1:CDS
GTGCTGATTCAACTTATCAA+CGG 0.645507 5:+28769989 MsaT026784.1:CDS
GCAACCACTGACACAGGTCT+CGG 0.647175 5:+28769591 MsaT026784.1:CDS
CGGCAACGGTAACCACCGGT+GGG 0.654733 5:+28767547 MsaT026784.1:CDS
AGGTGATCGTGAAACAGAAG+TGG 0.657969 5:+28770101 MsaT026784.1:CDS
TTGCTGCTGTGTCATTCCAA+AGG 0.666392 5:-28769572 None:intergenic
AGAGAAGAGTCATAGGACCA+GGG 0.673747 5:-28767455 None:intergenic
TGAGCCGAGACCTGTGTCAG+TGG 0.676749 5:-28769595 None:intergenic
GAAGGAAGAAGAAGAAGCGG+TGG 0.680960 5:+28767347 MsaT026784.1:CDS
AAAAGTGCGTCCGTACGTGG+CGG 0.684333 5:-28767417 None:intergenic
GTGGAAGGAAGAAGAAGAAG+CGG 0.684972 5:+28767344 MsaT026784.1:CDS
CGTGGCGGAAGAGTTAAGGT+GGG 0.691075 5:-28767402 None:intergenic
ACACAGGTCTCGGCTCACGA+AGG 0.691681 5:+28769601 MsaT026784.1:CDS
TTGAGCCCGACTCCAAAAGG+AGG 0.693961 5:+28770136 MsaT026784.1:CDS
TCTTCTTCTTCCTTCCACGG+TGG 0.698127 5:-28767339 None:intergenic
AGATGAATCAAACCCACCGG+TGG 0.700312 5:-28767559 None:intergenic
TGGAAATGGACCGACCACCG+TGG 0.747666 5:+28767325 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 28767330 28771118 28767330 ID=MsaG026784
Chr5 mRNA 28767330 28771118 28767330 ID=MsaT026784.1;Parent=MsaG026784
Chr5 exon 28767330 28767602 28767330 ID=MsaT026784.1.exon1;Parent=MsaT026784.1
Chr5 CDS 28767330 28767602 28767330 ID=cds.MsaT026784.1;Parent=MsaT026784.1
Chr5 exon 28769568 28770157 28769568 ID=MsaT026784.1.exon2;Parent=MsaT026784.1
Chr5 CDS 28769568 28770157 28769568 ID=cds.MsaT026784.1;Parent=MsaT026784.1
Chr5 exon 28770421 28770579 28770421 ID=MsaT026784.1.exon3;Parent=MsaT026784.1
Chr5 CDS 28770421 28770579 28770421 ID=cds.MsaT026784.1;Parent=MsaT026784.1
Chr5 exon 28770836 28771118 28770836 ID=MsaT026784.1.exon4;Parent=MsaT026784.1
Chr5 CDS 28770836 28771118 28770836 ID=cds.MsaT026784.1;Parent=MsaT026784.1
Gene Sequence

>MsaT026784.1

ATGGACCGACCACCGTGGAAGGAAGAAGAAGAAGCGGTGGTTGGTGGTGGTGAAGGGGGGCCACCACAGCGACCCACCTTAACTCTTCCGCCACGTACGGACGCACTTTTCACCGGTGGTTTTAGCCCTGGTCCTATGACTCTTCTCTCTAACTTATTTGCTGATGGAGATGACGGCAAGTCCTTCTCTCAGCTTCTCGCCGGTTCCATGGTGTCTCCGGCAACGGTAACCACCGGTGGGTTTGATTCATCTGGTTTCTTTTCACATCCTCAGGTATCCTTTGGAATGACACAGCAGCAACCACTGACACAGGTCTCGGCTCACGAAGGACAATCCAACAGTACTAATATGCATAACCAAGTCGAACATTTATCATCTGTACCAACATCCACCGATCATGCTCCTCTCTCCGAACAAAGGTTGCAGCCTTCTTCGTTGAATGTCGATAAGCCTGCCGATGATGGCTACAATTGGAGGAAATATGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTACAAGTGCACGCATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCACTTGCTGGTCATATAACCGCAATTATTTATAAAGGAGAGCACAATCATCAACTCCCGAATCCTAATAAGCGATCAAAAGACACTGTAACTTCAAATGAAAATTCAAATAGGCAAGGGAGTGCTGATTCAACTTATCAACGGATGACTTCAAACTCAATGTCTAAGATGGACCCTGAATCTAGTCAAGCAACAGGCGAACATCTATCTGGAACGAGTGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGTGGATGAGAAAAGAGTTGAGCCCGACTCCAAAAGGAGACATACAGAAGTCACAGTCTCAAATCCAACAACTTCACATAGTACTGTCACAGAGCCTAAAATCATCGTGCAAACTACCAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTTAAAGGAAATCCTTATCCTAGGAGCTATTACAAATGTACAACACCGAGTTGTAACGTTCGAAAGCATGTAGAGAGAGCATCGACAGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAACCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCTTCACAGTTAAAATCGCAAAATACCATTTCTGATAAGCCTAGTTTTGGTAGCATTGGTATTGGCGGGGGCAATGAGCAACAACCTGTTGCTCGTCTAAGGCTGAAGGAAGAGCAGATAACTTAA
Protein sequence

>MsaT026784.1

MDRPPWKEEEEAVVGGGEGGPPQRPTLTLPPRTDALFTGGFSPGPMTLLSNLFADGDDGKSFSQLLAGSMVSPATVTTGGFDSSGFFSHPQVSFGMTQQQPLTQVSAHEGQSNSTNMHNQVEHLSSVPTSTDHAPLSEQRLQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLAGHITAIIYKGEHNHQLPNPNKRSKDTVTSNENSNRQGSADSTYQRMTSNSMSKMDPESSQATGEHLSGTSDSEDVGDRETEVDEKRVEPDSKRRHTEVTVSNPTTSHSTVTEPKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPSCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISDKPSFGSIGIGGGNEQQPVARLRLKEEQIT*