AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG026837

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026837 MtrunA17_Chr5g0417621 94.774 421 16 3 1 417 23 441 0.0 829
MsaG026837 MtrunA17_Chr4g0042501 58.145 399 135 14 1 384 1 382 7.63e-137 398
MsaG026837 MtrunA17_Chr7g0254261 80.833 120 23 0 105 224 82 201 1.23e-66 216
MsaG026837 MtrunA17_Chr3g0125801 79.508 122 24 1 110 231 14 134 2.02e-61 200
MsaG026837 MtrunA17_Chr6g0480581 66.917 133 43 1 110 241 2 134 1.32e-59 194
MsaG026837 MtrunA17_Chr6g0460671 49.754 203 92 3 77 269 61 263 2.73e-58 194
MsaG026837 MtrunA17_Chr6g0460661 53.077 130 60 1 104 232 8 137 3.47e-45 154
MsaG026837 MtrunA17_Chr4g0008551 57.843 102 43 0 111 212 37 138 7.54e-39 143
MsaG026837 MtrunA17_Chr5g0401731 56.436 101 44 0 112 212 15 115 4.89e-38 140
MsaG026837 MtrunA17_Chr4g0053431 57.426 101 43 0 112 212 5 105 2.09e-37 137
MsaG026837 MtrunA17_Chr6g0454921 54.455 101 46 0 112 212 15 115 1.19e-35 130
MsaG026837 MtrunA17_Chr7g0238631 57.282 103 44 0 111 213 112 214 3.24e-34 134
MsaG026837 MtrunA17_Chr3g0133601 54.455 101 46 0 112 212 37 137 1.60e-33 125
MsaG026837 MtrunA17_Chr5g0437321 50.877 114 52 2 93 206 4 113 1.93e-32 124
MsaG026837 MtrunA17_Chr1g0157731 42.553 141 73 2 111 251 90 222 7.41e-32 128
MsaG026837 MtrunA17_Chr3g0139671 50.980 102 50 0 112 213 85 186 7.37e-31 125
MsaG026837 MtrunA17_Chr5g0429661 47.500 120 63 0 93 212 103 222 3.48e-30 119
MsaG026837 MtrunA17_Chr4g0058991 45.038 131 68 2 111 237 208 338 6.05e-29 117
MsaG026837 MtrunA17_Chr3g0117511 40.816 147 83 2 95 237 166 312 1.75e-27 113
MsaG026837 MtrunA17_Chr5g0397841 54.348 92 42 0 115 206 113 204 7.09e-27 112
MsaG026837 MtrunA17_Chr2g0309911 47.273 110 55 2 109 216 10 118 2.27e-26 108
MsaG026837 MtrunA17_Chr2g0323351 45.133 113 59 2 112 222 14 125 3.68e-26 105
MsaG026837 MtrunA17_Chr1g0187761 41.860 129 72 2 112 238 14 141 4.19e-26 106
MsaG026837 MtrunA17_Chr3g0103281 45.631 103 55 1 112 213 14 116 5.55e-26 107
MsaG026837 MtrunA17_Chr4g0022901 49.515 103 49 2 112 212 15 116 7.79e-26 105
MsaG026837 MtrunA17_Chr2g0311221 49.505 101 50 1 108 207 12 112 1.02e-25 106
MsaG026837 MtrunA17_Chr4g0022931 40.441 136 78 2 106 239 9 143 1.13e-25 105
MsaG026837 MtrunA17_Chr6g0470971 43.519 108 60 1 106 212 10 117 1.81e-25 105
MsaG026837 MtrunA17_Chr4g0022911 49.515 103 49 2 112 212 15 116 3.23e-25 104
MsaG026837 MtrunA17_Chr7g0228531 48.544 103 52 1 110 212 218 319 3.33e-25 106
MsaG026837 MtrunA17_Chr4g0030881 45.872 109 51 2 112 212 9 117 1.33e-24 102
MsaG026837 MtrunA17_Chr8g0387421 43.590 117 60 2 105 215 2 118 1.38e-24 103
MsaG026837 MtrunA17_Chr4g0055981 42.157 102 58 1 112 212 57 158 1.58e-24 100
MsaG026837 MtrunA17_Chr7g0220341 40.650 123 68 2 93 212 10 130 1.68e-24 102
MsaG026837 MtrunA17_Chr3g0088461 42.735 117 66 1 99 214 11 127 1.72e-24 103
MsaG026837 MtrunA17_Chr4g0048511 39.189 148 73 3 101 247 8 139 1.78e-24 103
MsaG026837 MtrunA17_Chr5g0417821 45.098 102 55 1 112 212 9 110 2.22e-24 102
MsaG026837 MtrunA17_Chr8g0342541 46.226 106 54 2 109 212 11 115 2.29e-24 103
MsaG026837 MtrunA17_Chr1g0203411 36.145 166 85 4 112 257 14 178 2.52e-24 102
MsaG026837 MtrunA17_Chr8g0360111 46.000 100 53 1 112 210 27 126 3.73e-24 100
MsaG026837 MtrunA17_Chr7g0274581 43.810 105 58 1 112 215 14 118 4.07e-24 99.4
MsaG026837 MtrunA17_Chr1g0211161 42.727 110 60 2 109 216 12 120 4.24e-24 99.8
MsaG026837 MtrunA17_Chr3g0099131 42.727 110 62 1 112 220 43 152 4.83e-24 104
MsaG026837 MtrunA17_Chr3g0115821 44.828 116 56 3 105 213 2 116 5.62e-24 102
MsaG026837 MtrunA17_Chr7g0228891 46.667 105 53 2 112 214 14 117 6.17e-24 100
MsaG026837 MtrunA17_Chr3g0117091 42.727 110 60 2 109 216 11 119 7.20e-24 101
MsaG026837 MtrunA17_Chr7g0270891 41.284 109 63 1 109 216 11 119 8.29e-24 102
MsaG026837 MtrunA17_Chr1g0193371 42.202 109 60 2 109 215 11 118 8.58e-24 102
MsaG026837 MtrunA17_Chr4g0070611 34.132 167 100 4 105 261 2 168 8.91e-24 100
MsaG026837 MtrunA17_Chr1g0209661 36.025 161 87 4 97 246 19 174 9.11e-24 100
MsaG026837 MtrunA17_Chr8g0342521 45.283 106 55 2 109 212 11 115 1.09e-23 101
MsaG026837 MtrunA17_Chr5g0434911 43.137 102 57 1 112 212 23 124 1.21e-23 99.8
MsaG026837 MtrunA17_Chr5g0397231 48.980 98 49 1 109 205 11 108 1.32e-23 100
MsaG026837 MtrunA17_Chr2g0327821 43.925 107 57 2 112 216 8 113 1.54e-23 98.6
MsaG026837 MtrunA17_Chr5g0434841 44.118 102 56 1 112 212 22 123 1.63e-23 100
MsaG026837 MtrunA17_Chr1g0203441 42.857 105 59 1 109 212 12 116 1.76e-23 99.0
MsaG026837 MtrunA17_Chr7g0228991 32.941 170 99 4 112 278 31 188 2.02e-23 99.0
MsaG026837 MtrunA17_Chr2g0330041 46.226 106 54 2 109 212 11 115 2.02e-23 101
MsaG026837 MtrunA17_Chr4g0058631 40.367 109 64 1 109 216 11 119 2.60e-23 100
MsaG026837 MtrunA17_Chr1g0193801 40.367 109 64 1 109 216 11 119 2.74e-23 100
MsaG026837 MtrunA17_Chr8g0342481 46.226 106 55 1 109 212 11 116 2.80e-23 100
MsaG026837 MtrunA17_Chr5g0400821 35.227 176 99 6 112 276 14 185 2.87e-23 99.4
MsaG026837 MtrunA17_Chr4g0032401 40.164 122 69 2 97 217 7 125 3.27e-23 99.8
MsaG026837 MtrunA17_Chr4g0070641 40.171 117 64 2 105 215 2 118 3.45e-23 95.5
MsaG026837 MtrunA17_Chr1g0154031 45.946 111 57 2 112 220 78 187 4.44e-23 100
MsaG026837 MtrunA17_Chr8g0354661 37.748 151 85 3 90 232 11 160 4.89e-23 101
MsaG026837 MtrunA17_Chr5g0434831 42.157 102 58 1 112 212 9 110 6.28e-23 95.5
MsaG026837 MtrunA17_Chr2g0328771 42.727 110 60 2 112 219 22 130 7.07e-23 98.6
MsaG026837 MtrunA17_Chr6g0452271 45.098 102 55 1 112 212 14 115 7.53e-23 98.6
MsaG026837 MtrunA17_Chr5g0435101 45.192 104 54 2 112 213 13 115 7.77e-23 95.9
MsaG026837 MtrunA17_Chr7g0228481 50.000 96 47 1 112 207 220 314 7.89e-23 99.8
MsaG026837 MtrunA17_Chr8g0343831 38.889 108 65 1 112 218 10 117 8.59e-23 96.7
MsaG026837 MtrunA17_Chr1g0192411 38.710 124 68 2 92 214 1 117 9.71e-23 99.4
MsaG026837 MtrunA17_Chr7g0271241 46.000 100 51 2 109 206 11 109 9.72e-23 99.0
MsaG026837 MtrunA17_Chr4g0022891 39.496 119 64 3 112 223 14 131 9.74e-23 96.3
MsaG026837 MtrunA17_Chr5g0434931 42.157 102 58 1 112 212 37 138 1.09e-22 97.1
MsaG026837 MtrunA17_Chr2g0281071 43.363 113 59 2 101 212 8 116 1.14e-22 98.2
MsaG026837 MtrunA17_Chr5g0410961 42.105 114 60 2 105 212 2 115 1.33e-22 98.2
MsaG026837 MtrunA17_Chr2g0323411 44.860 107 58 1 108 213 10 116 1.55e-22 97.4
MsaG026837 MtrunA17_Chr4g0037141 42.241 116 59 3 105 213 2 116 1.57e-22 96.7
MsaG026837 MtrunA17_Chr5g0395281 39.098 133 75 3 108 235 10 141 2.57e-22 96.7
MsaG026837 MtrunA17_Chr1g0167691 39.098 133 74 3 112 238 14 145 3.26e-22 95.1
MsaG026837 MtrunA17_Chr3g0131121 43.269 104 56 2 112 213 14 116 3.81e-22 95.9
MsaG026837 MtrunA17_Chr4g0039971 39.098 133 75 3 108 235 11 142 4.39e-22 96.7
MsaG026837 MtrunA17_Chr1g0186061 41.818 110 61 2 112 219 22 130 5.49e-22 94.7
MsaG026837 MtrunA17_Chr1g0151941 43.925 107 58 2 109 213 11 117 6.84e-22 94.4
MsaG026837 MtrunA17_Chr3g0080861 43.243 111 60 2 112 220 39 148 8.06e-22 97.4
MsaG026837 MtrunA17_Chr8g0346561 39.474 114 63 2 105 212 2 115 9.35e-22 94.7
MsaG026837 MtrunA17_Chr1g0180391 41.441 111 62 2 112 220 21 130 9.90e-22 93.2
MsaG026837 MtrunA17_Chr1g0167661 33.540 161 100 3 112 266 14 173 1.00e-21 94.0
MsaG026837 MtrunA17_Chr7g0217221 40.367 109 64 1 112 219 14 122 1.07e-21 94.0
MsaG026837 MtrunA17_Chr7g0228401 44.660 103 56 1 123 225 290 391 1.08e-21 97.1
MsaG026837 MtrunA17_Chr7g0261281 42.718 103 58 1 112 213 14 116 1.10e-21 94.4
MsaG026837 MtrunA17_Chr4g0022881 43.299 97 52 2 112 206 14 109 1.83e-21 92.4
MsaG026837 MtrunA17_Chr3g0135311 39.344 122 67 3 112 226 14 135 2.13e-21 94.7
MsaG026837 MtrunA17_Chr1g0194301 40.566 106 60 2 112 215 35 139 2.20e-21 93.2
MsaG026837 MtrunA17_Chr8g0334881 50.000 96 46 2 112 205 12 107 2.41e-21 94.0
MsaG026837 MtrunA17_Chr1g0168661 44.660 103 54 2 112 212 23 124 2.49e-21 92.8
MsaG026837 MtrunA17_Chr3g0121241 39.623 106 63 1 112 216 44 149 3.13e-21 93.6
MsaG026837 MtrunA17_Chr7g0275911 37.288 118 68 2 105 216 2 119 3.49e-21 92.4
MsaG026837 MtrunA17_Chr1g0152011 36.641 131 77 3 112 236 14 144 6.20e-21 93.2
MsaG026837 MtrunA17_Chr7g0240821 40.171 117 67 2 115 229 6 121 8.66e-21 90.5
MsaG026837 MtrunA17_Chr1g0194291 37.500 120 70 2 97 215 12 127 9.44e-21 91.3
MsaG026837 MtrunA17_Chr2g0322521 42.188 128 71 2 89 214 8 134 1.30e-20 93.2
MsaG026837 MtrunA17_Chr4g0054391 39.837 123 68 3 112 228 14 136 1.69e-20 91.3
MsaG026837 MtrunA17_Chr8g0385321 42.157 102 58 1 112 212 14 115 2.01e-20 91.3
MsaG026837 MtrunA17_Chr4g0060721 41.818 110 62 2 112 219 15 124 2.09e-20 91.7
MsaG026837 MtrunA17_Chr4g0028311 41.121 107 61 2 108 212 10 116 2.19e-20 91.3
MsaG026837 MtrunA17_Chr7g0228231 37.607 117 72 1 100 215 4 120 2.31e-20 89.0
MsaG026837 MtrunA17_Chr1g0177901 46.988 83 44 0 123 205 5 87 2.94e-20 88.6
MsaG026837 MtrunA17_Chr4g0057031 43.269 104 56 2 112 213 14 116 4.29e-20 89.7
MsaG026837 MtrunA17_Chr1g0194951 40.517 116 61 3 105 213 2 116 4.55e-20 91.3
MsaG026837 MtrunA17_Chr4g0013361 41.085 129 60 4 112 238 12 126 5.12e-20 89.7
MsaG026837 MtrunA17_Chr6g0450101 38.983 118 69 2 100 215 4 120 5.95e-20 87.8
MsaG026837 MtrunA17_Chr4g0044421 34.965 143 83 3 112 246 14 154 6.21e-20 87.0
MsaG026837 MtrunA17_Chr8g0349261 44.762 105 54 3 112 213 15 118 1.13e-19 89.0
MsaG026837 MtrunA17_Chr7g0233061 37.705 122 73 3 106 227 174 292 1.39e-19 89.7
MsaG026837 MtrunA17_Chr2g0327351 42.857 98 54 2 112 207 14 111 1.81e-19 88.6
MsaG026837 MtrunA17_Chr6g0453211 42.268 97 55 1 112 207 14 110 1.91e-19 88.6
MsaG026837 MtrunA17_Chr7g0264641 40.777 103 59 2 112 212 14 116 2.13e-19 87.4
MsaG026837 MtrunA17_Chr7g0254411 40.367 109 64 1 112 219 14 122 2.17e-19 88.6
MsaG026837 MtrunA17_Chr3g0110351 37.008 127 77 2 112 236 14 139 2.50e-19 88.2
MsaG026837 MtrunA17_Chr7g0247131 50.633 79 37 1 138 214 5 83 2.60e-19 87.4
MsaG026837 MtrunA17_Chr5g0441131 37.391 115 67 3 107 219 6 117 3.12e-19 85.1
MsaG026837 MtrunA17_Chr6g0453471 38.261 115 65 2 105 213 2 116 3.82e-19 88.2
MsaG026837 MtrunA17_Chr7g0217741 39.655 116 62 3 105 213 2 116 4.16e-19 87.4
MsaG026837 MtrunA17_Chr4g0072751 42.857 98 54 2 112 207 14 111 4.30e-19 88.2
MsaG026837 MtrunA17_Chr4g0042671 38.261 115 65 2 105 213 2 116 4.31e-19 88.6
MsaG026837 MtrunA17_Chr5g0440781 40.952 105 57 3 112 214 14 115 7.88e-19 84.0
MsaG026837 MtrunA17_Chr5g0434571 41.509 106 59 2 112 215 50 154 8.05e-19 87.4
MsaG026837 MtrunA17_Chr3g0092401 39.048 105 63 1 112 215 15 119 8.43e-19 86.7
MsaG026837 MtrunA17_Chr5g0416341 33.333 105 70 0 115 219 29 133 9.44e-19 88.2
MsaG026837 MtrunA17_Chr5g0441141 39.450 109 61 3 108 214 10 115 1.34e-18 85.5
MsaG026837 MtrunA17_Chr5g0440761 40.952 105 57 3 112 214 14 115 1.45e-18 85.1
MsaG026837 MtrunA17_Chr6g0487491 33.537 164 94 4 108 261 10 168 2.18e-18 84.3
MsaG026837 MtrunA17_Chr8g0362231 32.308 130 85 1 100 226 7 136 2.53e-18 86.7
MsaG026837 MtrunA17_Chr4g0068061 29.677 155 91 2 112 248 14 168 2.73e-18 85.5
MsaG026837 MtrunA17_Chr5g0434901 51.613 62 30 0 145 206 9 70 6.81e-18 79.3
MsaG026837 MtrunA17_Chr4g0068921 43.299 97 54 1 112 207 26 122 9.23e-18 81.3
MsaG026837 MtrunA17_Chr7g0238651 36.842 114 69 1 112 222 7 120 2.36e-17 83.2
MsaG026837 MtrunA17_Chr2g0293911 40.000 105 62 1 112 215 26 130 3.50e-17 82.0
MsaG026837 MtrunA17_Chr3g0099141 42.169 83 47 1 112 193 42 124 5.71e-16 74.7
MsaG026837 MtrunA17_Chr7g0229101 49.206 63 32 0 145 207 8 70 7.52e-16 75.9
MsaG026837 MtrunA17_Chr7g0229131 46.032 63 34 0 145 207 8 70 1.71e-14 71.2
MsaG026837 MtrunA17_Chr3g0093811 44.444 72 38 2 145 215 18 88 2.12e-14 73.2
MsaG026837 MtrunA17_Chr7g0269831 38.835 103 62 1 112 213 14 116 4.56e-14 73.2
MsaG026837 MtrunA17_Chr6g0483051 37.363 91 56 1 115 205 72 161 5.98e-14 73.9
MsaG026837 MtrunA17_Chr6g0483051 29.496 139 95 2 112 248 120 257 3.34e-12 68.2
MsaG026837 MtrunA17_Chr8g0342531 41.975 81 44 2 109 187 11 90 7.88e-14 69.3
MsaG026837 MtrunA17_Chr8g0342511 43.590 78 41 2 109 184 11 87 9.48e-14 67.0
MsaG026837 MtrunA17_Chr5g0395221 42.169 83 46 2 104 185 7 88 1.25e-13 66.2
MsaG026837 MtrunA17_Chr5g0425591 42.683 82 43 3 112 190 11 91 1.85e-13 65.9
MsaG026837 MtrunA17_Chr8g0342461 42.857 77 42 1 112 186 14 90 4.77e-13 66.2
MsaG026837 MtrunA17_Chr4g0042611 38.462 78 47 1 109 185 11 88 7.49e-13 63.9
MsaG026837 MtrunA17_Chr2g0323321 41.250 80 44 2 112 189 13 91 7.61e-13 64.7
MsaG026837 MtrunA17_Chr8g0342471 41.558 77 43 1 112 186 14 90 1.89e-12 64.7
MsaG026837 MtrunA17_Chr5g0421201 36.471 85 51 2 164 245 12 96 7.13e-12 63.9
MsaG026837 MtrunA17_Chr7g0233151 41.176 68 37 1 162 229 1 65 9.71e-12 63.2
MsaG026837 MtrunA17_Chr3g0104501 48.438 64 33 0 99 162 120 183 1.45e-11 63.5
MsaG026837 MtrunA17_Chr7g0274481 37.647 85 52 1 113 197 8 91 1.88e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG026837 AT1G69560.1 56.432 241 92 4 1 237 1 232 3.65e-80 250
MsaG026837 AT1G69560.2 56.432 241 92 4 1 237 17 248 4.49e-80 251
MsaG026837 AT1G26780.1 89.831 118 12 0 111 228 97 214 4.48e-75 236
MsaG026837 AT1G26780.2 89.831 118 12 0 111 228 97 214 2.03e-74 236
MsaG026837 AT5G17800.1 83.019 106 18 0 110 215 91 196 1.17e-61 202
MsaG026837 AT3G29020.1 73.504 117 31 0 107 223 60 176 1.42e-61 199
MsaG026837 AT3G29020.2 73.504 117 31 0 107 223 62 178 4.73e-61 200
MsaG026837 AT1G17950.1 76.106 113 27 0 110 222 3 115 6.92e-60 195
MsaG026837 AT1G73410.1 80.556 108 21 0 110 217 4 111 6.99e-57 187
MsaG026837 AT1G73410.2 80.556 108 21 0 110 217 4 111 2.29e-56 184
MsaG026837 AT4G33450.1 61.871 139 52 1 103 241 11 148 1.30e-55 184
MsaG026837 AT5G39700.1 64.486 107 38 0 113 219 57 163 4.16e-46 157
MsaG026837 AT2G39880.1 45.161 155 82 1 99 253 37 188 6.58e-39 144
MsaG026837 AT5G67300.1 41.053 190 87 5 112 290 6 181 1.49e-37 138
MsaG026837 AT4G37260.1 56.436 101 44 0 112 212 13 113 1.70e-36 136
MsaG026837 AT3G55730.1 54.286 105 48 0 111 215 55 159 2.13e-36 137
MsaG026837 AT2G23290.1 56.436 101 44 0 112 212 13 113 8.09e-36 134
MsaG026837 AT3G09230.1 54.369 103 47 0 111 213 54 156 6.94e-35 133
MsaG026837 AT3G50060.1 53.922 102 47 0 111 212 5 106 8.45e-34 128
MsaG026837 AT3G09370.1 56.436 101 44 0 112 212 130 230 4.95e-33 130
MsaG026837 AT3G09370.2 56.436 101 44 0 112 212 135 235 5.26e-33 130
MsaG026837 AT3G09370.3 56.436 101 44 0 112 212 143 243 9.04e-33 129
MsaG026837 AT5G02320.1 54.902 102 46 0 111 212 126 227 2.23e-32 129
MsaG026837 AT5G02320.2 54.902 102 46 0 111 212 126 227 2.23e-32 129
MsaG026837 AT5G02320.3 54.902 102 46 0 111 212 66 167 2.33e-32 128
MsaG026837 AT5G11510.3 48.544 103 53 0 111 213 80 182 6.38e-30 123
MsaG026837 AT5G11510.1 48.544 103 53 0 111 213 80 182 6.38e-30 123
MsaG026837 AT5G11510.4 48.544 103 53 0 111 213 80 182 6.38e-30 123
MsaG026837 AT5G11510.2 48.544 103 53 0 111 213 80 182 7.25e-30 122
MsaG026837 AT5G11510.5 48.544 103 53 0 111 213 80 182 8.03e-30 122
MsaG026837 AT5G58850.1 43.704 135 72 1 107 241 100 230 1.73e-29 119
MsaG026837 AT4G32730.5 48.544 103 53 0 111 213 86 188 1.78e-29 121
MsaG026837 AT4G32730.4 48.544 103 53 0 111 213 86 188 1.78e-29 121
MsaG026837 AT4G32730.3 48.544 103 53 0 111 213 86 188 1.78e-29 121
MsaG026837 AT4G32730.2 48.544 103 53 0 111 213 86 188 1.78e-29 121
MsaG026837 AT4G32730.1 48.544 103 53 0 111 213 86 188 1.81e-29 121
MsaG026837 AT2G25230.1 46.729 107 55 2 106 211 20 125 9.38e-29 113
MsaG026837 AT5G11050.1 47.541 122 59 2 110 231 103 219 1.23e-28 116
MsaG026837 AT3G27785.1 42.975 121 69 0 106 226 183 303 2.73e-28 115
MsaG026837 AT3G12720.1 49.091 110 53 2 109 216 21 129 1.29e-27 111
MsaG026837 AT5G40360.1 42.500 120 66 1 103 222 149 265 8.41e-27 110
MsaG026837 AT4G18770.1 39.726 146 79 2 106 242 211 356 9.23e-27 111
MsaG026837 AT5G40330.1 43.243 111 62 1 104 213 6 116 1.50e-26 106
MsaG026837 AT5G14750.1 46.078 102 54 1 112 212 18 119 1.87e-26 105
MsaG026837 AT1G79180.1 46.429 112 57 2 108 217 12 122 5.02e-26 107
MsaG026837 AT3G27920.1 41.228 114 66 1 100 212 4 117 9.60e-26 104
MsaG026837 AT3G28470.1 48.485 99 50 1 108 205 10 108 1.25e-25 106
MsaG026837 AT2G26960.1 42.742 124 70 1 98 220 8 131 2.65e-25 107
MsaG026837 AT4G25560.1 43.519 108 60 1 112 218 12 119 3.96e-25 104
MsaG026837 AT4G28110.1 43.478 115 59 2 105 213 2 116 4.83e-25 103
MsaG026837 AT4G26930.1 42.400 125 71 1 97 220 6 130 6.05e-25 105
MsaG026837 AT1G63910.1 43.697 119 66 1 109 226 11 129 7.59e-25 105
MsaG026837 AT5G54230.1 46.078 102 54 1 112 212 14 115 1.37e-24 103
MsaG026837 AT5G65230.1 47.115 104 52 2 112 213 14 116 2.70e-24 102
MsaG026837 AT3G23250.1 43.810 105 58 1 112 215 14 118 3.03e-24 102
MsaG026837 AT4G05100.1 43.478 115 58 2 105 212 2 116 4.38e-24 102
MsaG026837 AT3G53200.1 44.860 107 56 2 112 216 11 116 5.71e-24 100
MsaG026837 AT5G10280.1 39.231 130 76 2 108 235 10 138 5.80e-24 102
MsaG026837 AT3G30210.1 39.062 128 72 3 110 235 27 150 5.94e-24 100
MsaG026837 AT1G18570.1 44.340 106 58 1 112 216 15 120 8.60e-24 102
MsaG026837 AT1G09540.1 37.857 140 77 3 109 246 11 142 8.78e-24 102
MsaG026837 AT3G13890.2 36.552 145 91 1 109 252 11 155 1.02e-23 102
MsaG026837 AT3G48920.1 46.875 96 50 1 112 206 20 115 1.12e-23 99.8
MsaG026837 AT4G01680.1 42.056 107 61 1 109 214 11 117 1.29e-23 101
MsaG026837 AT4G01680.3 42.056 107 61 1 109 214 11 117 1.34e-23 99.0
MsaG026837 AT5G12870.1 41.593 113 65 1 106 217 14 126 1.36e-23 100
MsaG026837 AT5G56110.1 45.631 103 55 1 112 213 14 116 1.40e-23 100
MsaG026837 AT3G11440.2 42.342 111 63 1 105 214 36 146 1.60e-23 102
MsaG026837 AT2G31180.1 36.196 163 89 3 112 272 14 163 1.69e-23 99.0
MsaG026837 AT1G56160.1 44.340 106 56 2 109 212 13 117 1.81e-23 100
MsaG026837 AT5G60890.1 42.453 106 60 1 112 216 14 119 2.02e-23 99.8
MsaG026837 AT3G11440.3 39.098 133 75 2 83 214 19 146 2.52e-23 102
MsaG026837 AT3G11440.4 39.098 133 75 2 83 214 19 146 2.52e-23 102
MsaG026837 AT3G11440.1 39.098 133 75 2 83 214 19 146 2.52e-23 102
MsaG026837 AT3G46130.1 44.860 107 56 2 112 216 11 116 2.85e-23 98.6
MsaG026837 AT5G59780.3 43.925 107 57 2 112 216 10 115 3.07e-23 97.8
MsaG026837 AT2G26950.1 42.857 105 56 2 111 214 17 118 3.09e-23 100
MsaG026837 AT3G12820.1 45.370 108 56 2 108 213 12 118 3.44e-23 97.8
MsaG026837 AT5G26660.1 42.727 110 60 2 109 216 11 119 3.59e-23 100
MsaG026837 AT5G40430.1 40.566 106 62 1 106 211 48 152 4.11e-23 98.2
MsaG026837 AT5G52600.1 43.396 106 59 1 108 212 10 115 4.25e-23 96.7
MsaG026837 AT3G13890.1 35.065 154 90 2 109 252 11 164 5.81e-23 99.8
MsaG026837 AT4G00540.2 45.794 107 55 1 112 215 103 209 7.00e-23 100
MsaG026837 AT1G57560.1 41.818 110 61 2 109 216 11 119 7.08e-23 98.6
MsaG026837 AT1G57560.2 41.818 110 61 2 109 216 11 119 8.67e-23 97.8
MsaG026837 AT4G00540.1 45.794 107 55 1 112 215 101 207 1.41e-22 99.8
MsaG026837 AT4G00540.1 30.435 138 87 2 78 206 10 147 1.55e-11 66.2
MsaG026837 AT2G32460.1 44.144 111 59 2 112 220 20 129 1.42e-22 100
MsaG026837 AT1G79180.2 37.500 144 56 2 108 217 12 155 1.46e-22 98.2
MsaG026837 AT5G14340.1 44.762 105 55 2 112 214 26 129 1.46e-22 97.1
MsaG026837 AT2G32460.2 44.144 111 59 2 112 220 8 117 1.59e-22 99.8
MsaG026837 AT1G16490.1 41.964 112 62 2 108 217 12 122 1.70e-22 96.7
MsaG026837 AT4G38620.1 42.241 116 59 3 105 213 2 116 1.94e-22 96.7
MsaG026837 AT1G06180.1 44.231 104 55 2 112 213 14 116 2.04e-22 95.9
MsaG026837 AT5G06100.1 39.370 127 69 2 96 214 11 137 2.15e-22 99.4
MsaG026837 AT5G16770.4 37.857 140 78 3 105 235 2 141 2.56e-22 97.4
MsaG026837 AT5G16770.3 37.857 140 78 3 105 235 2 141 2.56e-22 97.4
MsaG026837 AT4G01680.2 39.496 119 59 2 109 214 11 129 2.98e-22 97.4
MsaG026837 AT1G35515.1 39.474 114 63 2 105 212 2 115 3.20e-22 94.4
MsaG026837 AT2G47190.1 39.344 122 69 2 94 214 8 125 3.32e-22 95.9
MsaG026837 AT5G16770.1 37.857 140 78 3 105 235 2 141 3.60e-22 97.1
MsaG026837 AT5G16770.2 37.857 140 78 3 105 235 2 141 3.60e-22 97.1
MsaG026837 AT5G06100.5 39.370 127 69 2 96 214 11 137 3.63e-22 99.0
MsaG026837 AT5G06100.2 39.370 127 69 2 96 214 11 137 3.63e-22 99.0
MsaG026837 AT5G06100.3 39.370 127 69 2 96 214 11 137 3.63e-22 99.0
MsaG026837 AT5G06100.4 39.370 127 69 2 96 214 11 137 3.63e-22 99.0
MsaG026837 AT4G17785.1 42.017 119 66 2 99 215 2 119 4.62e-22 97.1
MsaG026837 AT4G17785.2 42.017 119 66 2 99 215 2 119 4.71e-22 97.1
MsaG026837 AT1G74080.1 47.368 95 49 1 112 205 14 108 4.80e-22 96.7
MsaG026837 AT5G61420.2 43.396 106 59 1 112 216 14 119 6.07e-22 97.1
MsaG026837 AT1G22640.1 42.241 116 59 3 105 213 2 116 6.60e-22 94.7
MsaG026837 AT3G02940.2 42.105 114 60 2 105 212 2 115 8.57e-22 95.5
MsaG026837 AT4G21440.1 45.098 102 55 1 112 212 14 115 1.17e-21 95.9
MsaG026837 AT3G13540.1 36.000 125 73 2 99 216 6 130 1.19e-21 94.0
MsaG026837 AT5G52260.1 46.154 104 53 2 112 213 14 116 1.22e-21 94.4
MsaG026837 AT3G02940.1 42.105 114 60 2 105 212 2 115 1.27e-21 95.1
MsaG026837 AT3G02940.3 42.105 114 60 2 105 212 2 115 1.27e-21 95.1
MsaG026837 AT3G61250.1 41.667 132 62 4 112 240 14 133 1.62e-21 94.7
MsaG026837 AT1G34670.1 35.036 137 83 2 105 235 2 138 1.90e-21 95.5
MsaG026837 AT5G62470.1 41.346 104 61 0 112 215 14 117 1.99e-21 95.1
MsaG026837 AT5G55020.1 42.727 110 62 1 112 220 28 137 2.01e-21 96.7
MsaG026837 AT5G57620.1 42.718 103 57 2 112 212 14 116 2.61e-21 94.7
MsaG026837 AT5G23000.1 42.593 108 58 2 108 212 10 116 2.88e-21 94.4
MsaG026837 AT2G02820.3 36.697 109 69 0 115 223 33 141 2.95e-21 94.4
MsaG026837 AT3G08500.1 40.179 112 66 1 104 214 24 135 2.97e-21 94.7
MsaG026837 AT2G02820.1 36.697 109 69 0 115 223 33 141 3.00e-21 95.9
MsaG026837 AT4G09460.1 39.655 116 62 3 105 213 2 116 3.47e-21 92.4
MsaG026837 AT3G01140.2 41.228 114 61 2 105 212 2 115 3.72e-21 94.4
MsaG026837 AT2G02820.2 36.697 109 69 0 115 223 33 141 4.04e-21 95.9
MsaG026837 AT3G24310.1 40.000 115 66 2 112 224 20 133 4.41e-21 92.8
MsaG026837 AT1G74430.1 40.566 106 62 1 112 216 14 119 4.71e-21 92.8
MsaG026837 AT5G14750.3 50.725 69 34 0 145 213 18 86 4.77e-21 90.1
MsaG026837 AT3G01140.1 42.718 103 58 1 112 213 57 159 7.76e-21 94.0
MsaG026837 AT5G07700.1 45.098 102 55 1 112 212 14 115 7.79e-21 93.2
MsaG026837 AT5G07700.2 45.098 102 55 1 112 212 14 115 7.79e-21 93.2
MsaG026837 AT4G34990.1 40.000 115 63 2 105 213 2 116 8.57e-21 92.0
MsaG026837 AT4G13480.1 43.810 105 56 2 112 214 8 111 8.62e-21 91.7
MsaG026837 AT5G65790.1 38.017 121 72 3 112 229 14 134 8.91e-21 93.6
MsaG026837 AT1G18710.1 40.777 103 60 1 112 213 14 116 9.87e-21 91.7
MsaG026837 AT5G35550.1 37.815 119 72 2 112 228 16 134 1.02e-20 91.3
MsaG026837 AT5G15310.1 40.351 114 62 2 105 212 2 115 1.20e-20 92.4
MsaG026837 AT5G16600.1 35.862 145 85 4 112 253 14 153 1.34e-20 92.4
MsaG026837 AT5G15310.2 40.351 114 62 2 105 212 2 115 1.35e-20 92.4
MsaG026837 AT3G49690.1 42.308 104 58 2 112 213 14 117 1.54e-20 92.0
MsaG026837 AT1G25340.2 39.423 104 59 1 112 215 20 119 1.66e-20 91.3
MsaG026837 AT1G25340.1 40.566 106 60 2 112 215 20 124 1.82e-20 91.3
MsaG026837 AT1G68320.1 41.509 106 59 2 112 215 21 125 2.15e-20 91.3
MsaG026837 AT5G15310.4 40.351 114 62 2 105 212 2 115 2.38e-20 90.1
MsaG026837 AT3G60460.1 44.660 103 55 2 105 205 6 108 2.47e-20 91.3
MsaG026837 AT5G07690.1 43.564 101 56 1 112 211 14 114 2.47e-20 91.7
MsaG026837 AT2G16720.1 39.655 116 62 3 105 213 2 116 2.58e-20 90.5
MsaG026837 AT3G27810.1 41.441 111 63 2 108 217 18 127 2.73e-20 89.4
MsaG026837 AT1G25340.3 39.423 104 59 1 112 215 20 119 3.71e-20 90.9
MsaG026837 AT3G47600.1 40.952 105 61 1 112 215 14 118 3.73e-20 91.3
MsaG026837 AT1G08810.1 40.336 119 68 2 112 229 14 130 4.04e-20 90.1
MsaG026837 AT1G14350.2 36.522 115 70 1 106 217 16 130 4.58e-20 92.0
MsaG026837 AT1G14350.1 36.522 115 70 1 106 217 16 130 4.58e-20 92.0
MsaG026837 AT5G40350.1 28.241 216 125 7 108 321 15 202 5.01e-20 88.6
MsaG026837 AT4G12350.1 41.346 104 58 2 112 213 14 116 6.18e-20 89.7
MsaG026837 AT5G62470.2 40.952 105 61 1 112 215 14 118 7.31e-20 90.9
MsaG026837 AT1G66370.1 34.884 129 80 3 105 231 2 128 7.85e-20 88.6
MsaG026837 AT3G01530.1 42.593 108 59 2 112 217 27 133 1.06e-19 87.4
MsaG026837 AT1G66380.1 39.091 110 66 1 105 213 3 112 1.47e-19 85.1
MsaG026837 AT1G74650.1 41.748 103 59 1 112 213 14 116 1.74e-19 89.4
MsaG026837 AT5G49330.1 40.777 103 60 1 112 213 14 116 2.27e-19 89.0
MsaG026837 AT4G22680.1 42.718 103 56 2 112 212 14 115 2.39e-19 87.8
MsaG026837 AT1G48000.1 43.158 95 53 1 112 205 34 128 2.47e-19 87.0
MsaG026837 AT3G28910.1 42.157 102 58 1 112 212 14 115 2.73e-19 88.6
MsaG026837 AT2G47460.1 37.500 128 76 2 112 238 14 138 2.76e-19 89.4
MsaG026837 AT1G66230.1 41.509 106 59 2 112 215 14 118 3.44e-19 87.4
MsaG026837 AT3G53200.2 46.429 84 34 1 145 228 12 84 7.23e-19 85.1
MsaG026837 AT3G12820.2 52.941 68 32 0 145 212 2 69 1.21e-18 84.0
MsaG026837 AT5G26660.2 47.222 72 38 0 145 216 17 88 3.97e-18 85.1
MsaG026837 AT4G37780.1 35.652 115 71 3 112 223 14 128 3.98e-18 85.1
MsaG026837 AT5G49620.1 44.330 97 53 1 112 207 28 124 6.44e-18 84.3
MsaG026837 AT3G18100.1 41.053 95 56 0 112 206 546 640 6.64e-18 86.7
MsaG026837 AT5G59780.2 48.611 72 37 0 145 216 23 94 6.97e-18 82.4
MsaG026837 AT3G46130.3 48.611 72 37 0 145 216 13 84 8.55e-18 82.4
MsaG026837 AT3G18100.3 41.053 95 56 0 112 206 498 592 8.67e-18 86.3
MsaG026837 AT3G18100.4 41.489 94 55 0 112 205 385 478 9.02e-18 86.3
MsaG026837 AT2G36890.1 42.718 103 57 2 112 212 14 116 1.11e-17 83.6
MsaG026837 AT3G46130.4 48.611 72 37 0 145 216 23 94 1.27e-17 82.0
MsaG026837 AT3G18100.2 41.053 95 56 0 112 206 333 427 1.35e-17 85.5
MsaG026837 AT2G36890.2 42.718 103 57 2 112 212 55 157 1.69e-17 83.6
MsaG026837 AT3G06490.1 43.878 98 52 2 112 207 21 117 1.92e-17 83.2
MsaG026837 AT1G56650.1 36.364 121 76 1 105 224 3 123 2.28e-17 81.6
MsaG026837 AT3G62610.1 38.835 103 62 1 112 213 14 116 2.39e-17 83.2
MsaG026837 AT3G27810.2 49.315 73 36 1 145 217 7 78 2.58e-17 79.7
MsaG026837 AT5G35550.2 43.529 85 47 1 145 228 53 137 4.74e-17 80.9
MsaG026837 AT5G40350.2 28.652 178 98 6 145 321 8 157 7.98e-17 78.2
MsaG026837 AT5G62320.1 41.441 111 55 3 112 213 15 124 9.20e-17 79.7
MsaG026837 AT1G66390.1 38.182 110 67 1 105 213 3 112 2.66e-16 78.6
MsaG026837 AT3G47600.2 38.384 99 61 0 117 215 14 112 1.55e-15 77.8
MsaG026837 AT2G37630.1 35.088 114 71 1 112 222 4 117 1.92e-15 77.8
MsaG026837 AT5G49620.2 38.739 111 53 2 112 207 28 138 9.27e-15 75.1
MsaG026837 AT1G66380.3 46.377 69 37 0 145 213 11 79 1.35e-14 70.1
MsaG026837 AT5G14750.4 44.828 58 32 0 155 212 1 58 9.29e-14 68.6
MsaG026837 AT5G14750.2 44.828 58 32 0 155 212 1 58 9.29e-14 68.6
MsaG026837 AT1G71030.2 40.909 66 39 0 148 213 5 70 1.62e-13 68.9
MsaG026837 AT1G71030.1 40.909 66 39 0 148 213 19 84 2.03e-13 68.9
MsaG026837 AT3G23250.2 44.262 61 34 0 155 215 1 61 1.31e-12 67.4
MsaG026837 AT1G22640.3 47.458 59 31 0 155 213 1 59 1.39e-12 66.6
MsaG026837 AT1G09770.1 37.647 85 52 1 113 197 8 91 4.44e-11 65.5

Find 91 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAACTTGTTGCTCTTTA+TGG 0.055543 5:-29994561 MsaT026837.1:CDS
ATGCAAGCACATAGAATTTA+TGG 0.169715 5:-29993949 MsaT026837.1:CDS
CCATTCTGCTGTAAACATTT+TGG 0.171567 5:+29993797 None:intergenic
TGTTGATTCTTGGATCTAAT+TGG 0.226790 5:+29994007 None:intergenic
ACAGCATTGTCTGTTCTTCC+TGG 0.232685 5:+29993895 None:intergenic
GTTATGTTCTTCATATCTTT+TGG 0.234765 5:+29994776 None:intergenic
CATTGAAGTTAGTGTTATTA+TGG 0.235907 5:+29994685 None:intergenic
CCTCTTTGCCACTTCCATTA+GGG 0.244007 5:+29994649 None:intergenic
TGGAGGGAAAAGGTTCTTAT+TGG 0.252461 5:-29994740 MsaT026837.1:CDS
AATGCTCTTCTGTTGATTCT+TGG 0.265592 5:+29993997 None:intergenic
GATAGACACTCACTCATAAA+TGG 0.274072 5:+29994798 None:intergenic
TCCAATTTCTTCTATGCATA+TGG 0.283073 5:-29994943 None:intergenic
CTCTTTATGGTCCTCAAAAC+TGG 0.287586 5:-29994548 MsaT026837.1:CDS
TCCTCTTTGCCACTTCCATT+AGG 0.312075 5:+29994648 None:intergenic
AAATCACTGGCATGTTATAA+TGG 0.323655 5:-29993869 MsaT026837.1:CDS
AGAAGTAGCATATGGGAAAA+TGG 0.333027 5:+29993675 None:intergenic
CTCTCTATCAACACAAACTA+TGG 0.336963 5:-29994900 MsaT026837.1:CDS
TGAGGAGTTTCAACAGCATC+TGG 0.344189 5:+29992582 None:intergenic
CATTCAATCAGATCAGATAC+TGG 0.376946 5:-29992788 MsaT026837.1:CDS
AGCAACAAGTTCTTTAAGCT+TGG 0.378116 5:+29994569 None:intergenic
GGGGCTCCATTGAGAAAATA+AGG 0.387825 5:+29993715 None:intergenic
ACATAACATGGATGATGATA+TGG 0.394745 5:-29994760 MsaT026837.1:CDS
TATGTGAAGGCAAGAGTTGT+AGG 0.395608 5:-29994044 MsaT026837.1:intron
CAGCATTGTCTGTTCTTCCT+GGG 0.397684 5:+29993896 None:intergenic
CATGGTGGTAGGGTTGAGTA+TGG 0.404238 5:-29993637 MsaT026837.1:CDS
CTCCATCACAAAGCTCTTGT+AGG 0.410727 5:+29994836 None:intergenic
TGTTGGAAAGAAGTAGCATA+TGG 0.427053 5:+29993667 None:intergenic
ATAGAATTTATGGAAACAAA+TGG 0.443806 5:-29993939 MsaT026837.1:CDS
TCTTCTTCTCCTGTATGCAC+TGG 0.451134 5:+29993825 None:intergenic
GTGTCTCTGCGGCCAAAGCT+TGG 0.455340 5:+29993766 None:intergenic
ATGGAGCAAAATCCAAGCTT+TGG 0.457109 5:-29993778 MsaT026837.1:CDS
TCTTTCCAACATTGTGCTCA+TGG 0.461539 5:-29993655 MsaT026837.1:CDS
GCAAGAGTTGTAGGCTAAGA+TGG 0.469016 5:-29994035 MsaT026837.1:CDS
TTTCTCAATGGAGCCCCACT+TGG 0.471962 5:-29993709 MsaT026837.1:CDS
AGTGGCAAAGAGGAAGATAA+TGG 0.477427 5:-29994639 MsaT026837.1:CDS
GATGAGTTAGAGAACCCTAA+TGG 0.489473 5:-29994663 MsaT026837.1:CDS
TTAAGCTTGGAATCTTCAGC+AGG 0.491648 5:+29994582 None:intergenic
CAGTATCTGATCTGATTGAA+TGG 0.492098 5:+29992789 None:intergenic
AACATTGTGCTCATGGTGGT+AGG 0.492580 5:-29993648 MsaT026837.1:CDS
GAATCTTATAGCTGAAAAGT+TGG 0.494696 5:-29994526 MsaT026837.1:CDS
AAGAGCTTTGTGATGGAGAA+TGG 0.496350 5:-29994831 MsaT026837.1:CDS
GAAAAGTTGGAAGGAAGATC+AGG 0.498856 5:-29994513 MsaT026837.1:intron
GGTTCTTATTGGAGTGAGGA+AGG 0.499259 5:-29994729 MsaT026837.1:CDS
CATATGGTTTATGCAGACCT+TGG 0.505208 5:-29994927 MsaT026837.1:CDS
TAGAATTTATGGAAACAAAT+GGG 0.516486 5:-29993938 MsaT026837.1:CDS
AGCATACAAACCAACATGTA+GGG 0.516701 5:+29993564 None:intergenic
TGATTCTGTTTCCATTGTTG+TGG 0.518322 5:+29993744 None:intergenic
GTAAATGTGCAAGAGGGCAT+TGG 0.525006 5:-29994608 MsaT026837.1:CDS
AAAAGGTTCTTATTGGAGTG+AGG 0.527759 5:-29994733 MsaT026837.1:CDS
GAGGAGTTTCAACAGCATCT+GGG 0.530438 5:+29992583 None:intergenic
GATGATGATATGGAGGGAAA+AGG 0.534008 5:-29994750 MsaT026837.1:CDS
CCAAAATGTTTACAGCAGAA+TGG 0.535209 5:-29993797 MsaT026837.1:CDS
TCAGCAACATATCATAATGC+AGG 0.546403 5:-29992636 MsaT026837.1:CDS
GAGAACAATCCAGTGCATAC+AGG 0.549261 5:-29993834 MsaT026837.1:CDS
TACCACCATGAGCACAATGT+TGG 0.549480 5:+29993650 None:intergenic
AATATTGTTGAGGATAATGA+TGG 0.551677 5:+29992718 None:intergenic
ACACCAGAGAAGTAATCAAA+AGG 0.553846 5:+29993532 None:intergenic
GAGCATACAAACCAACATGT+AGG 0.558851 5:+29993563 None:intergenic
TTAGAGAACCCTAATGGAAG+TGG 0.562159 5:-29994657 MsaT026837.1:CDS
TTCTCAATGGAGCCCCACTT+GGG 0.562639 5:-29993708 MsaT026837.1:CDS
AATGTGCAAGAGGGCATTGG+AGG 0.567448 5:-29994605 MsaT026837.1:CDS
CTTATAGCTGAAAAGTTGGA+AGG 0.575448 5:-29994522 MsaT026837.1:CDS
GTTGGAAAGAAGTAGCATAT+GGG 0.582719 5:+29993668 None:intergenic
ACATTGTGCTCATGGTGGTA+GGG 0.583708 5:-29993647 MsaT026837.1:CDS
TGCCTACAAGAGCTTTGTGA+TGG 0.587526 5:-29994838 MsaT026837.1:CDS
CAGTCTAGTAAATGTGCAAG+AGG 0.591655 5:-29994615 MsaT026837.1:CDS
CCCTAATGGAAGTGGCAAAG+AGG 0.591951 5:-29994649 MsaT026837.1:CDS
AGGAGTTTCAACAGCATCTG+GGG 0.596052 5:+29992584 None:intergenic
TAACATGGATGATGATATGG+AGG 0.597486 5:-29994757 MsaT026837.1:CDS
ATGCAAGGACCCCTACATGT+TGG 0.603281 5:-29993574 MsaT026837.1:CDS
AAGATATGAAGAACATAACA+TGG 0.607365 5:-29994772 MsaT026837.1:CDS
CCGCAGAGACACCACAACAA+TGG 0.610250 5:-29993755 MsaT026837.1:CDS
ATCATGTAGCACCTACTCCA+AGG 0.615109 5:+29992547 None:intergenic
TGGACACACTATTCCCAAGT+GGG 0.619688 5:+29993695 None:intergenic
TTTGTCATCAAATATTGTTG+AGG 0.625193 5:+29992708 None:intergenic
ATGATAGCAAGACTATTCCC+AGG 0.625306 5:-29993913 MsaT026837.1:CDS
TTCCAACATTGTGCTCATGG+TGG 0.629597 5:-29993652 MsaT026837.1:CDS
ATTCAATCAGATCAGATACT+GGG 0.636557 5:-29992787 MsaT026837.1:CDS
GGTGAGAGAGAAGCTATGCA+AGG 0.639165 5:-29993589 MsaT026837.1:CDS
AATCAGATCAGATACTGGGA+TGG 0.649755 5:-29992783 MsaT026837.1:CDS
TCTCTCTCACCACTCATGTG+AGG 0.664807 5:+29993601 None:intergenic
CCATTGTTGTGGTGTCTCTG+CGG 0.666871 5:+29993755 None:intergenic
GCATACAAACCAACATGTAG+GGG 0.687045 5:+29993565 None:intergenic
TGTTGATAGAGAGAGATCCA+AGG 0.688359 5:+29994910 None:intergenic
TGGTAGAAGCAATGACATGG+TGG 0.688499 5:-29992817 MsaT026837.1:CDS
AGTCTAGTAAATGTGCAAGA+GGG 0.697348 5:-29994614 MsaT026837.1:CDS
ATGGACACACTATTCCCAAG+TGG 0.700526 5:+29993694 None:intergenic
GGACACACTATTCCCAAGTG+GGG 0.700541 5:+29993696 None:intergenic
AACATGGATGATGATATGGA+GGG 0.715955 5:-29994756 MsaT026837.1:CDS
GCTCCATTGAGAAAATAAGG+TGG 0.743341 5:+29993718 None:intergenic
AGTTGGTAGAAGCAATGACA+TGG 0.754945 5:-29992820 MsaT026837.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 29992548 29994952 29992548 ID=MsaG026837
Chr5 mRNA 29992548 29994952 29992548 ID=MsaT026837.1;Parent=MsaG026837
Chr5 exon 29992548 29992840 29992548 ID=MsaT026837.1.exon3;Parent=MsaT026837.1
Chr5 CDS 29992548 29992840 29992548 ID=cds.MsaT026837.1;Parent=MsaT026837.1
Chr5 exon 29993536 29994057 29993536 ID=MsaT026837.1.exon2;Parent=MsaT026837.1
Chr5 CDS 29993536 29994057 29993536 ID=cds.MsaT026837.1;Parent=MsaT026837.1
Chr5 exon 29994514 29994952 29994514 ID=MsaT026837.1.exon1;Parent=MsaT026837.1
Chr5 CDS 29994514 29994952 29994514 ID=cds.MsaT026837.1;Parent=MsaT026837.1
Gene Sequence

>MsaT026837.1

ATGCATATGGTTTATGCAGACCTTGGATCTCTCTCTATCAACACAAACTATGGTGTTGTTTCAAGTTTAGACAAAGAGAGTAAAAATAGCTATGCCTACAAGAGCTTTGTGATGGAGAATGGTAGTATCTTTCCATTTATGAGTGAGTGTCTATCCAAAAGATATGAAGAACATAACATGGATGATGATATGGAGGGAAAAGGTTCTTATTGGAGTGAGGAAGGTGAAAACAGTGAGAAAACTAACCATAATAACACTAACTTCAATGATGAGTTAGAGAACCCTAATGGAAGTGGCAAAGAGGAAGATAATGGACAGTCTAGTAAATGTGCAAGAGGGCATTGGAGGCCTGCTGAAGATTCCAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAAAACTGGAATCTTATAGCTGAAAAGTTGGAAGGAAGATCAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTAGATCCAAGAATCAACAGAAGAGCATTTACTGAAGAAGAAGAAGAGAGACTAATGCAAGCACATAGAATTTATGGAAACAAATGGGCAATGATAGCAAGACTATTCCCAGGAAGAACAGACAATGCTGTGAAAAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCCAGTGCATACAGGAGAAGAAGATTGAGCCAAAATGTTTACAGCAGAATGGAGCAAAATCCAAGCTTTGGCCGCAGAGACACCACAACAATGGAAACAGAATCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTGTGTCCATTTTCCCATATGCTACTTCTTTCCAACATTGTGCTCATGGTGGTAGGGTTGAGTATGGTTTAAATGTTTTACCTCACATGAGTGGTGAGAGAGAAGCTATGCAAGGACCCCTACATGTTGGTTTGTATGCTCAACAAGCACCTTTTGATTACTTCTCTGTTGGTAGAAGCAATGACATGGTGGAAGAACCATTCAATCAGATCAGATACTGGGATGGCACTAATGATGAATATCAACAACAACAACTATCTAGTGTCTACCATCATTATCCTCAACAATATTTGATGACAAAGCAAAATCAAAACAATCACAATTTTCACATTTTCTCAAATTCATCAGCATCAGCAACATATCATAATGCAGGAAACAGTGAAAAAGTTCTGAATGATGACACCCCAGATGCTGTTGAAACTCCTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA
Protein sequence

>MsaT026837.1

MHMVYADLGSLSINTNYGVVSSLDKESKNSYAYKSFVMENGSIFPFMSECLSKRYEEHNMDDDMEGKGSYWSEEGENSEKTNHNNTNFNDELENPNGSGKEEDNGQSSKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQNVYSRMEQNPSFGRRDTTTMETESSPPYFLNGAPLGNSVSIFPYATSFQHCAHGGRVEYGLNVLPHMSGEREAMQGPLHVGLYAQQAPFDYFSVGRSNDMVEEPFNQIRYWDGTNDEYQQQQLSSVYHHYPQQYLMTKQNQNNHNFHIFSNSSASATYHNAGNSEKVLNDDTPDAVETPQFFDFLGVGAT*