AlfalfaGEDB | MsaG027235

M. sativa ssp. caerulea / MsaG027235

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027235	XP_024639982.1	97.143	560	13	2	1	559	1	558	0.0	1108

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027235	sp\|Q9CAA9\|BH049_ARATH	42.726	543	218	19	1	535	3	460	1.82e-110	341

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027235	tr\|A0A072UE55\|A0A072UE55_MEDTR	97.143	560	13	2	1	559	1	558	0.0	1108

TFs/TRs:

Gene ID	Type	Classification
MsaG027235	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000157	MsaG027235	0.853492	4.434620e-61	2.714863e-58
MsaG000326	MsaG027235	0.826462	4.765512e-54	1.248410e-51
MsaG000519	MsaG027235	0.829285	1.005842e-54	2.851851e-52
MsaG000640	MsaG027235	0.837108	1.157030e-56	4.129233e-54
MsaG001084	MsaG027235	0.822197	4.743853e-53	1.105963e-50
MsaG001178	MsaG027235	0.816953	7.366439e-52	1.496665e-49
MsaG001179	MsaG027235	0.821470	6.975601e-53	1.595039e-50
MsaG001454	MsaG027235	0.803238	6.452542e-49	9.391187e-47
MsaG001727	MsaG027235	0.805399	2.299860e-49	3.519187e-47
MsaG001859	MsaG027235	0.819950	1.553602e-52	3.412441e-50
MsaG002015	MsaG027235	0.810541	1.874195e-50	3.243151e-48
MsaG002016	MsaG027235	0.801445	1.504009e-48	2.101010e-46
MsaG003210	MsaG027235	0.827849	2.227312e-54	6.065216e-52
MsaG003200	MsaG027235	0.821497	6.878540e-53	1.573980e-50
MsaG003201	MsaG027235	0.812609	6.691635e-51	1.218270e-48
MsaG003202	MsaG027235	0.824693	1.245779e-53	3.107509e-51
MsaG003203	MsaG027235	0.810598	1.822513e-50	3.157988e-48
MsaG003315	MsaG027235	0.818585	3.168622e-52	6.714430e-50
MsaG003468	MsaG027235	0.822063	5.094089e-53	1.183358e-50
MsaG003868	MsaG027235	0.837769	7.845917e-57	2.857221e-54
MsaG003946	MsaG027235	0.809287	3.479689e-50	5.840575e-48
MsaG003948	MsaG027235	0.804655	3.285327e-49	4.941005e-47
MsaG004373	MsaG027235	0.823508	2.356466e-53	5.691847e-51
MsaG004464	MsaG027235	0.810422	1.987761e-50	3.429781e-48
MsaG004576	MsaG027235	0.811041	1.463072e-50	2.562783e-48
MsaG004715	MsaG027235	0.844119	1.721401e-58	7.662929e-56
MsaG004890	MsaG027235	0.848365	1.215943e-59	6.232581e-57
MsaG005401	MsaG027235	0.807366	8.896012e-50	1.425815e-47
MsaG005435	MsaG027235	0.810817	1.634537e-50	2.847506e-48
MsaG005506	MsaG027235	0.823539	2.318458e-53	5.604649e-51
MsaG005508	MsaG027235	0.843264	2.907530e-58	1.259146e-55
MsaG005642	MsaG027235	0.816557	9.030758e-52	1.816140e-49
MsaG005705	MsaG027235	0.806904	1.112815e-49	1.764191e-47
MsaG005838	MsaG027235	0.822002	5.263155e-53	1.220630e-50
MsaG005839	MsaG027235	0.804361	3.781767e-49	5.649160e-47
MsaG005811	MsaG027235	0.807822	7.125355e-50	1.154596e-47
MsaG005864	MsaG027235	0.809914	2.554558e-50	4.353434e-48
MsaG005902	MsaG027235	0.822615	3.797799e-53	8.954348e-51
MsaG006175	MsaG027235	0.845024	9.849082e-59	4.517389e-56
MsaG006456	MsaG027235	0.825595	7.644140e-54	1.954616e-51
MsaG006867	MsaG027235	0.816348	1.005259e-51	2.010907e-49
MsaG006904	MsaG027235	0.860697	3.394109e-63	2.710516e-60
MsaG007088	MsaG027235	0.804220	4.044768e-49	6.022355e-47
MsaG007067	MsaG027235	0.804868	2.966863e-49	4.484292e-47
MsaG007262	MsaG027235	0.805481	2.211480e-49	3.390350e-47
MsaG007353	MsaG027235	0.816524	9.185607e-52	1.845693e-49
MsaG007570	MsaG027235	0.809938	2.524846e-50	4.305214e-48
MsaG007880	MsaG027235	0.866908	4.064919e-65	4.148062e-62
MsaG007716	MsaG027235	0.871426	1.409564e-66	1.735255e-63
MsaG007814	MsaG027235	0.813791	3.692051e-51	6.923671e-49
MsaG007833	MsaG027235	0.834795	4.438262e-56	1.477585e-53
MsaG007834	MsaG027235	0.803190	6.602123e-49	9.598368e-47
MsaG008103	MsaG027235	0.830063	6.516394e-55	1.889323e-52
MsaG008552	MsaG027235	0.812088	8.682624e-51	1.560406e-48
MsaG010053	MsaG027235	0.818067	4.145478e-52	8.667470e-50
MsaG010066	MsaG027235	0.847357	2.297362e-59	1.138525e-56
MsaG010299	MsaG027235	0.811041	1.462861e-50	2.562422e-48
MsaG010394	MsaG027235	0.837608	8.627404e-57	3.126335e-54
MsaG010599	MsaG027235	0.802021	1.147429e-48	1.623929e-46
MsaG010835	MsaG027235	0.848867	8.836932e-60	4.608009e-57
MsaG010894	MsaG027235	0.841071	1.099772e-57	4.440417e-55
MsaG010906	MsaG027235	0.837332	1.014509e-56	3.645307e-54
MsaG010899	MsaG027235	0.840683	1.388498e-57	5.537774e-55
MsaG010900	MsaG027235	0.806590	1.295595e-49	2.038922e-47
MsaG011646	MsaG027235	0.841007	1.143135e-57	4.605926e-55
MsaG012341	MsaG027235	0.819413	2.058016e-52	4.456780e-50
MsaG012304	MsaG027235	0.838845	4.157017e-57	1.565297e-54
MsaG012380	MsaG027235	0.804675	3.254499e-49	4.896889e-47
MsaG012382	MsaG027235	0.814226	2.963510e-51	5.618263e-49
MsaG012388	MsaG027235	0.806235	1.538289e-49	2.400602e-47
MsaG012422	MsaG027235	0.812056	8.824878e-51	1.584736e-48
MsaG012424	MsaG027235	0.807186	9.705799e-50	1.549013e-47
MsaG012933	MsaG027235	0.802124	1.092864e-48	1.550369e-46
MsaG012931	MsaG027235	0.817207	6.463266e-52	1.321807e-49
MsaG013644	MsaG027235	0.839176	3.414352e-57	1.298896e-54
MsaG013845	MsaG027235	0.853640	4.023654e-61	2.476228e-58
MsaG014905	MsaG027235	0.812642	6.578810e-51	1.198731e-48
MsaG015705	MsaG027235	0.821244	7.864289e-53	1.787526e-50
MsaG017058	MsaG027235	0.854285	2.628525e-61	1.655511e-58
MsaG017180	MsaG027235	0.839183	3.400175e-57	1.293794e-54
MsaG017209	MsaG027235	0.823502	2.364739e-53	5.710768e-51
MsaG017505	MsaG027235	0.806361	1.447597e-49	2.265779e-47
MsaG017886	MsaG027235	0.819298	2.184797e-52	4.717224e-50
MsaG018248	MsaG027235	0.818499	3.312169e-52	7.002973e-50
MsaG018447	MsaG027235	0.812281	7.884379e-51	1.423760e-48
MsaG018452	MsaG027235	0.806820	1.159064e-49	1.833886e-47
MsaG019180	MsaG027235	0.808919	4.166693e-50	6.932566e-48
MsaG019925	MsaG027235	0.820187	1.372137e-52	3.032961e-50
MsaG020033	MsaG027235	0.806412	1.412244e-49	2.213183e-47
MsaG020466	MsaG027235	0.809556	3.047920e-50	5.149608e-48
MsaG020540	MsaG027235	0.815817	1.319047e-51	2.603172e-49
MsaG020580	MsaG027235	0.821398	7.249535e-53	1.654502e-50
MsaG021575	MsaG027235	0.813064	5.325459e-51	9.806408e-49
MsaG021668	MsaG027235	0.847656	1.903364e-59	9.527800e-57
MsaG021863	MsaG027235	0.838920	3.976469e-57	1.500800e-54
MsaG021896	MsaG027235	0.831360	3.146426e-55	9.468490e-53
MsaG022100	MsaG027235	0.818221	3.827683e-52	8.035040e-50
MsaG023672	MsaG027235	0.801272	1.631544e-48	2.270141e-46
MsaG024012	MsaG027235	0.802264	1.022900e-48	1.455805e-46
MsaG025484	MsaG027235	0.855416	1.239457e-61	8.128406e-59
MsaG026714	MsaG027235	0.811131	1.398643e-50	2.455309e-48
MsaG026889	MsaG027235	0.828313	1.723635e-54	4.755120e-52
MsaG026970	MsaG027235	0.812543	6.916299e-51	1.257151e-48
MsaG027235	MsaG027716	0.807274	9.301772e-50	1.487575e-47
MsaG027235	MsaG028026	0.822327	4.428858e-53	1.036152e-50
MsaG027235	MsaG028034	0.800454	2.391958e-48	3.267456e-46
MsaG027235	MsaG028375	0.810503	1.909493e-50	3.301165e-48
MsaG027235	MsaG028351	0.801082	1.783088e-48	2.470406e-46
MsaG027235	MsaG028457	0.809845	2.642782e-50	4.496411e-48
MsaG027235	MsaG028503	0.804709	3.202149e-49	4.821891e-47
MsaG027235	MsaG028698	0.833850	7.641794e-56	2.473190e-53
MsaG027235	MsaG028716	0.815484	1.563872e-51	3.060240e-49
MsaG027235	MsaG028765	0.811257	1.313734e-50	2.313435e-48
MsaG027235	MsaG028811	0.817639	5.172094e-52	1.069498e-49
MsaG027235	MsaG029188	0.813494	4.287897e-51	7.981001e-49
MsaG027235	MsaG029899	0.806566	1.310632e-49	2.061403e-47
MsaG027235	MsaG029948	0.822604	3.820957e-53	9.006143e-51
MsaG027235	MsaG030198	0.843679	2.256009e-58	9.900788e-56
MsaG027235	MsaG030471	0.812789	6.113620e-51	1.118033e-48
MsaG027235	MsaG030501	0.829168	1.073341e-54	3.033056e-52
MsaG027235	MsaG032062	0.816644	8.636033e-52	1.740592e-49
MsaG027235	MsaG033343	0.826563	4.509931e-54	1.184689e-51
MsaG027235	MsaG033369	0.809378	3.327053e-50	5.596839e-48
MsaG027235	MsaG033693	0.817465	5.658564e-52	1.164904e-49
MsaG027235	MsaG033831	0.813421	4.449003e-51	8.265925e-49
MsaG027235	MsaG034172	0.840030	2.052990e-57	8.022265e-55
MsaG027235	MsaG034288	0.807623	7.850625e-50	1.266019e-47
MsaG027235	MsaG034827	0.805173	2.563690e-49	3.902463e-47
MsaG027235	MsaG034829	0.817624	5.211979e-52	1.077343e-49
MsaG027235	MsaG035057	0.806951	1.087916e-49	1.726627e-47
MsaG027235	MsaG035511	0.835107	3.706926e-56	1.245672e-53
MsaG027235	MsaG035686	0.806397	1.422116e-49	2.227843e-47
MsaG027235	MsaG036326	0.842271	5.325149e-58	2.233629e-55
MsaG027235	MsaG038016	0.845072	9.560565e-59	4.391621e-56
MsaG027235	MsaG039934	0.805658	2.030996e-49	3.126607e-47
MsaG027235	MsaG040704	0.811561	1.129472e-50	2.003806e-48
MsaG027235	MsaG040994	0.801893	1.218706e-48	1.719895e-46
MsaG027235	MsaG041039	0.817841	4.658889e-52	9.684600e-50
MsaG027235	MsaG041256	0.801222	1.670104e-48	2.321151e-46
MsaG027235	MsaG041899	0.829426	9.296400e-55	2.646626e-52
MsaG027235	MsaG041900	0.839902	2.216159e-57	8.625281e-55
MsaG027235	MsaG041901	0.836120	2.059457e-56	7.134238e-54
MsaG027235	MsaG041902	0.831553	2.822304e-55	8.541520e-53
MsaG027235	MsaG041903	0.809127	3.762458e-50	6.291406e-48
MsaG027235	MsaG041949	0.824165	1.656002e-53	4.071756e-51
MsaG027235	MsaG042632	0.806880	1.125804e-49	1.783790e-47
MsaG027235	MsaG043665	0.804790	3.079885e-49	4.646610e-47
MsaG027235	MsaG045021	0.826131	5.709162e-54	1.481874e-51
MsaG027235	MsaG045409	0.822280	4.540702e-53	1.060945e-50
MsaG027235	MsaG045445	0.829647	8.223756e-55	2.356113e-52
MsaG027235	MsaG045446	0.818516	3.282811e-52	6.944042e-50
MsaG027235	MsaG045452	0.836114	2.066989e-56	7.159020e-54
MsaG027235	MsaG045890	0.851069	2.153428e-60	1.210958e-57
MsaG027235	MsaG046307	0.804819	3.038503e-49	4.587246e-47
MsaG027235	MsaG046423	0.832734	1.445606e-55	4.528066e-53
MsaG027235	MsaG046383	0.844045	1.802185e-58	8.002425e-56
MsaG027235	MsaG046512	0.836011	2.194715e-56	7.577548e-54
MsaG027235	MsaG046619	0.835776	2.516263e-56	8.626488e-54
MsaG027235	MsaG046816	0.800008	2.945751e-48	3.983632e-46
MsaG027235	MsaG046945	0.830163	6.162185e-55	1.791747e-52
MsaG027235	MsaG047054	0.823495	2.373922e-53	5.731803e-51
MsaG027235	MsaG047055	0.808767	4.489888e-50	7.442981e-48
MsaG027235	MsaG004129	0.802747	8.141673e-49	1.171607e-46
MsaG027235	MsaG000835	0.806967	1.079220e-49	1.713497e-47
MsaG027235	MsaG004907	0.818171	3.927514e-52	8.234008e-50
MsaG027235	MsaG008494	0.803337	6.156620e-49	8.980896e-47
MsaG027235	MsaG008796	0.859069	1.045367e-62	7.845643e-60
MsaG027235	MsaG009037	0.816370	9.940937e-52	1.989667e-49
MsaG027235	MsaG013493	0.802166	1.071420e-48	1.521420e-46
MsaG027235	MsaG012695	0.817791	4.780869e-52	9.925232e-50
MsaG027235	MsaG019142	0.813539	4.191814e-51	7.811149e-49
MsaG027235	MsaG019914	0.802563	8.883969e-49	1.273098e-46
MsaG027235	MsaG019037	0.818401	3.485674e-52	7.351044e-50
MsaG027235	MsaG020796	0.808983	4.038823e-50	6.730046e-48
MsaG027235	MsaG018378	0.817590	5.304140e-52	1.095454e-49
MsaG027235	MsaG023222	0.807938	6.731199e-50	1.093823e-47
MsaG027235	MsaG029571	0.817852	4.633731e-52	9.634735e-50
MsaG027235	MsaG032092	0.801128	1.744997e-48	2.420192e-46
MsaG027235	MsaG032243	0.821297	7.645249e-53	1.740189e-50
MsaG027235	MsaG031747	0.819972	1.536186e-52	3.376135e-50
MsaG027235	MsaG033148	0.801734	1.312903e-48	1.846132e-46
MsaG027235	MsaG032473	0.800957	1.890462e-48	2.611807e-46
MsaG027235	MsaG033325	0.804946	2.859057e-49	4.329033e-47
MsaG027235	MsaG032876	0.801865	1.234466e-48	1.741033e-46
MsaG027235	MsaG037384	0.803950	4.601384e-49	6.808171e-47
MsaG027235	MsaG037984	0.806993	1.066051e-49	1.693599e-47
MsaG027235	MsaG038151	0.821834	5.752205e-53	1.328081e-50
MsaG027235	MsaG036796	0.806215	1.553269e-49	2.422869e-47
MsaG027235	MsaG042295	0.814103	3.153038e-51	5.959138e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027235	MtrunA17_Chr5g0421111	97.143	560	13	2	1	559	1	558	0.0	1108
MsaG027235	MtrunA17_Chr8g0365941	57.875	527	146	14	1	519	1	459	0.0	532
MsaG027235	MtrunA17_Chr8g0339091	37.500	448	208	19	142	559	93	498	1.37e-60	208
MsaG027235	MtrunA17_Chr7g0234761	49.407	253	91	10	320	549	274	512	7.39e-57	199
MsaG027235	MtrunA17_Chr3g0144641	50.218	229	94	6	348	559	173	398	8.82e-57	195
MsaG027235	MtrunA17_Chr1g0152131	55.172	203	64	5	298	476	191	390	3.83e-56	194
MsaG027235	MtrunA17_Chr4g0035101	41.516	277	140	10	300	559	73	344	2.89e-48	171
MsaG027235	MtrunA17_Chr8g0363921	76.344	93	22	0	363	455	148	240	2.93e-41	150
MsaG027235	MtrunA17_Chr7g0258161	73.913	92	24	0	360	451	167	258	9.44e-41	150
MsaG027235	MtrunA17_Chr8g0385911	76.289	97	19	3	363	456	142	237	9.47e-40	147
MsaG027235	MtrunA17_Chr3g0131771	85.366	82	12	0	357	438	138	219	9.65e-40	147
MsaG027235	MtrunA17_Chr5g0415291	72.917	96	25	1	344	439	91	185	2.15e-39	144
MsaG027235	MtrunA17_Chr1g0174161	70.787	89	26	0	363	451	157	245	4.03e-38	143
MsaG027235	MtrunA17_Chr6g0484271	63.366	101	36	1	346	446	136	235	1.79e-33	128
MsaG027235	MtrunA17_Chr4g0074161	65.753	73	24	1	359	431	199	270	5.05e-21	95.5
MsaG027235	MtrunA17_Chr1g0190731	68.182	66	20	1	366	431	193	257	6.64e-20	91.7
MsaG027235	MtrunA17_Chr4g0014771	56.923	65	28	0	366	430	118	182	2.02e-15	75.1
MsaG027235	MtrunA17_Chr7g0258181	50.000	74	37	0	366	439	243	316	3.39e-15	77.0
MsaG027235	MtrunA17_Chr1g0174271	52.113	71	34	0	366	436	298	368	7.02e-15	76.6
MsaG027235	MtrunA17_Chr4g0032951	56.923	65	28	0	366	430	355	419	1.12e-14	76.3
MsaG027235	MtrunA17_Chr1g0182791	52.174	69	32	1	368	436	319	386	3.61e-14	75.1
MsaG027235	MtrunA17_Chr2g0329041	42.529	87	42	1	361	439	319	405	4.04e-14	74.7
MsaG027235	MtrunA17_Chr1g0184841	63.636	66	23	1	366	431	120	184	1.94e-13	70.9
MsaG027235	MtrunA17_Chr3g0087771	44.086	93	47	1	338	430	299	386	7.78e-13	70.5
MsaG027235	MtrunA17_Chr1g0193321	31.618	136	77	2	305	440	416	535	1.04e-12	70.9
MsaG027235	MtrunA17_Chr3g0095391	51.562	64	30	1	368	431	311	373	6.36e-12	67.8
MsaG027235	MtrunA17_Chr7g0231461	44.186	86	36	2	355	429	275	359	1.87e-11	66.6
MsaG027235	MtrunA17_Chr1g0152651	50.769	65	31	1	366	430	274	337	1.94e-11	65.9
MsaG027235	MtrunA17_Chr1g0153241	46.154	65	34	1	368	432	87	150	2.32e-11	64.7
MsaG027235	MtrunA17_Chr8g0351881	41.026	78	38	1	361	430	303	380	2.90e-11	65.5
MsaG027235	MtrunA17_Chr7g0262691	48.438	64	32	1	368	431	254	316	5.28e-11	65.1
MsaG027235	MtrunA17_Chr3g0134741	51.562	64	30	1	367	430	230	292	9.68e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027235	AT1G68920.3	42.804	542	218	18	1	535	3	459	4.02e-113	345
MsaG027235	AT1G68920.1	42.726	543	218	19	1	535	3	460	1.85e-111	341
MsaG027235	AT1G68920.4	42.726	543	218	19	1	535	3	460	1.85e-111	341
MsaG027235	AT1G68920.2	42.726	543	218	19	1	535	3	460	1.85e-111	341
MsaG027235	AT1G26260.4	40.757	449	135	18	114	558	68	389	6.61e-73	238
MsaG027235	AT1G26260.1	40.757	449	135	18	114	558	68	389	6.61e-73	238
MsaG027235	AT1G26260.6	40.757	449	135	18	114	558	68	389	6.61e-73	238
MsaG027235	AT1G26260.2	40.757	449	135	18	114	558	68	389	6.61e-73	238
MsaG027235	AT1G26260.5	41.772	395	127	15	150	540	60	355	1.10e-67	224
MsaG027235	AT1G26260.3	48.039	306	102	12	255	558	88	338	2.82e-66	219
MsaG027235	AT1G10120.2	49.776	223	76	6	316	537	161	348	6.66e-53	184
MsaG027235	AT1G10120.1	49.776	223	76	6	316	537	161	348	6.66e-53	184
MsaG027235	AT3G07340.1	40.000	300	135	7	279	559	183	456	1.96e-49	177
MsaG027235	AT3G07340.2	53.333	180	62	3	279	453	183	345	2.56e-49	177
MsaG027235	AT3G23690.1	46.000	250	107	11	298	535	112	345	1.35e-46	167
MsaG027235	AT4G34530.1	69.565	115	30	2	360	469	166	280	5.74e-46	165
MsaG027235	AT5G48560.2	75.962	104	22	2	353	453	286	389	1.11e-45	167
MsaG027235	AT5G48560.1	75.962	104	22	2	353	453	286	389	1.82e-45	167
MsaG027235	AT1G59640.1	55.782	147	62	2	311	455	80	225	1.05e-41	151
MsaG027235	AT1G59640.2	46.809	188	90	4	268	453	44	223	2.43e-41	152
MsaG027235	AT2G42300.4	70.968	93	27	0	360	452	179	271	4.03e-41	150
MsaG027235	AT2G18300.1	52.632	152	67	3	300	450	122	269	1.91e-40	150
MsaG027235	AT2G18300.2	51.948	154	69	3	300	452	122	271	1.96e-40	150
MsaG027235	AT2G18300.3	52.632	152	67	3	300	450	122	269	4.03e-40	150
MsaG027235	AT2G42300.1	71.739	92	26	0	360	451	179	270	7.42e-40	148
MsaG027235	AT3G57800.2	72.826	92	25	0	360	451	198	289	8.61e-40	149
MsaG027235	AT5G50915.1	56.463	147	59	4	347	492	117	259	9.73e-40	146
MsaG027235	AT5G50915.2	56.463	147	59	4	347	492	117	259	9.73e-40	146
MsaG027235	AT5G50915.3	56.463	147	59	4	347	492	117	259	1.03e-39	146
MsaG027235	AT5G50915.4	56.463	147	59	4	347	492	117	259	1.03e-39	146
MsaG027235	AT4G36540.1	52.866	157	64	3	310	459	81	234	1.18e-39	147
MsaG027235	AT4G36540.2	54.730	148	57	3	310	450	81	225	2.82e-39	145
MsaG027235	AT5G62610.2	61.905	105	39	1	334	437	120	224	1.24e-35	135
MsaG027235	AT5G62610.1	61.905	105	39	1	334	437	120	224	1.24e-35	135
MsaG027235	AT1G18400.2	71.084	83	24	0	364	446	143	225	2.27e-33	127
MsaG027235	AT1G73830.2	68.132	91	24	1	365	450	146	236	3.86e-33	127
MsaG027235	AT1G18400.1	71.084	83	24	0	364	446	143	225	4.06e-33	127
MsaG027235	AT1G73830.1	71.951	82	23	0	365	446	146	227	7.48e-33	127
MsaG027235	AT1G25330.1	44.586	157	65	2	331	465	67	223	4.82e-32	123
MsaG027235	AT3G57800.1	48.201	139	25	1	360	451	198	336	2.86e-31	126
MsaG027235	AT5G58010.1	58.065	93	34	2	353	441	86	177	5.17e-22	97.1
MsaG027235	AT2G24260.2	64.384	73	25	1	359	431	28	99	7.26e-22	95.5
MsaG027235	AT4G30980.1	56.122	98	37	2	334	431	103	194	2.29e-21	95.5
MsaG027235	AT2G24260.1	64.384	73	25	1	359	431	131	202	4.48e-21	95.5
MsaG027235	AT4G30980.2	56.122	98	37	2	334	431	151	242	5.65e-21	95.1
MsaG027235	AT2G42300.5	78.261	46	10	0	360	405	179	224	2.66e-17	81.6
MsaG027235	AT2G42300.3	78.261	46	10	0	360	405	179	224	2.66e-17	81.6
MsaG027235	AT2G42300.2	78.261	46	10	0	360	405	179	224	3.32e-17	81.6
MsaG027235	AT4G09180.1	50.000	78	37	1	364	439	182	259	6.55e-15	75.5
MsaG027235	AT2G42280.1	54.688	64	29	0	366	429	279	342	1.28e-14	75.9
MsaG027235	AT2G42280.3	56.061	66	27	1	366	429	279	344	2.44e-14	75.1
MsaG027235	AT2G20180.7	35.965	114	61	3	320	431	168	271	2.94e-14	75.5
MsaG027235	AT2G20180.1	35.965	114	61	3	320	431	168	271	2.94e-14	75.5
MsaG027235	AT2G20180.5	35.965	114	61	3	320	431	168	271	2.94e-14	75.5
MsaG027235	AT2G20180.4	35.965	114	61	3	320	431	239	342	3.06e-14	75.9
MsaG027235	AT2G20180.6	35.965	114	61	3	320	431	239	342	3.06e-14	75.9
MsaG027235	AT2G20180.2	35.965	114	61	3	320	431	239	342	3.06e-14	75.9
MsaG027235	AT2G20180.3	35.965	114	61	3	320	431	239	342	3.06e-14	75.9
MsaG027235	AT1G35460.1	52.239	67	32	0	364	430	179	245	4.61e-14	72.8
MsaG027235	AT1G09530.3	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT1G09530.2	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT1G09530.5	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT1G09530.1	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT1G09530.4	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT1G09530.6	51.562	64	30	1	368	431	339	401	1.23e-13	73.9
MsaG027235	AT4G28790.1	33.775	151	77	5	368	515	273	403	1.24e-13	73.6
MsaG027235	AT1G51140.1	54.688	64	29	0	366	429	304	367	2.89e-13	72.0
MsaG027235	AT2G20180.8	35.455	110	61	3	320	428	239	339	3.26e-13	71.6
MsaG027235	AT4G28815.2	55.172	58	25	1	369	426	71	127	6.79e-13	68.9
MsaG027235	AT4G02590.3	62.121	66	24	1	366	431	83	147	1.02e-12	68.6
MsaG027235	AT4G02590.2	62.121	66	24	1	366	431	146	210	1.37e-12	69.3
MsaG027235	AT4G02590.1	62.121	66	24	1	366	431	146	210	1.37e-12	69.3
MsaG027235	AT1G03040.2	62.121	66	24	1	366	431	139	203	1.41e-12	68.9
MsaG027235	AT1G03040.1	62.121	66	24	1	366	431	144	208	1.73e-12	68.9
MsaG027235	AT4G28815.1	55.172	58	25	1	369	426	147	203	1.88e-12	68.9
MsaG027235	AT4G28800.1	45.205	73	39	1	369	441	252	323	2.52e-12	69.7
MsaG027235	AT4G00050.2	52.308	65	30	1	366	430	105	168	3.03e-12	68.2
MsaG027235	AT1G03040.3	62.121	66	24	1	366	431	144	208	3.28e-12	68.6
MsaG027235	AT4G00050.1	52.308	65	30	1	366	430	207	270	6.07e-12	68.2
MsaG027235	AT4G00050.3	52.308	65	30	1	366	430	207	270	7.31e-12	67.8
MsaG027235	AT4G28790.2	46.970	66	34	1	368	433	273	337	1.27e-11	66.6
MsaG027235	AT1G27740.1	43.434	99	48	3	339	430	133	230	2.18e-11	65.1
MsaG027235	AT4G28800.2	52.542	59	27	1	369	427	264	321	2.26e-11	66.6
MsaG027235	AT4G33880.1	45.000	80	41	2	353	430	251	329	3.12e-11	65.5
MsaG027235	AT2G43140.2	51.562	64	31	0	366	429	231	294	4.09e-11	64.7
MsaG027235	AT2G43140.1	51.562	64	31	0	366	429	134	197	6.08e-11	62.8

Find 177 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCAGTTTCCTACTGATTC+TGG	0.189881	5:+38505622	MsaT027235.1:CDS
CTTCAAATACAATTGGAATT+AGG	0.207807	5:+38505467	MsaT027235.1:CDS
AGTGATGTAGTGAACGCTTA+TGG	0.252653	5:+38505694	MsaT027235.1:CDS
ACTCATTTACTCCTAACTTT+TGG	0.254020	5:+38505392	MsaT027235.1:CDS
ACAACCAAGTTCGACAATTA+AGG	0.286757	5:+38506286	MsaT027235.1:CDS
TCTGTTGGGTTGGTTTCAAT+TGG	0.290470	5:+38505301	MsaT027235.1:CDS
AGTTCGACAATTAAGGCTTC+TGG	0.298196	5:+38506293	MsaT027235.1:CDS
GATCATGGAACACTTGAAAT+TGG	0.303398	5:+38505523	MsaT027235.1:CDS
TCACCCTTCTGTTGGTTCTC+AGG	0.306928	5:-38506260	None:intergenic
CAATGGATCAATACCTGATT+TGG	0.309027	5:-38507502	None:intergenic
TTGCCACCTGATTGGAGATT+TGG	0.311440	5:+38505268	MsaT027235.1:CDS
GCTGCGAGGTTCTCGTGTTT+TGG	0.317332	5:+38505658	MsaT027235.1:CDS
CACCCTTCTGTTGGTTCTCA+GGG	0.326528	5:-38506259	None:intergenic
TTCTGGGAAGAATGCCAAAC+AGG	0.341010	5:+38506310	MsaT027235.1:CDS
GAGTTTAGTCCTTTCATAGA+AGG	0.345035	5:-38506066	None:intergenic
AGGAAAGATGGGTTTGGCTT+TGG	0.352939	5:+38505487	MsaT027235.1:CDS
GGAACTAGGGATGCTCTTGC+AGG	0.361664	5:+38505757	MsaT027235.1:CDS
ATTTACTGTTGCAAGTTTCA+TGG	0.362132	5:-38507147	None:intergenic
TCGGACGGGTTTGCCATGTT+TGG	0.369494	5:-38507421	None:intergenic
GGGAGTTCTTCAAATACAAT+TGG	0.377973	5:+38505460	MsaT027235.1:CDS
CTGTTGGGTTGGTTTCAATT+GGG	0.381869	5:+38505302	MsaT027235.1:CDS
ACAATTGGAATTAGGAAAGA+TGG	0.383879	5:+38505475	MsaT027235.1:CDS
ACATGTATGTATTCCTCCTT+AGG	0.389054	5:-38506353	None:intergenic
TAGTAGTACCTTCCAACATT+GGG	0.407959	5:-38506035	None:intergenic
ATGTATGCCGGTTCAATTCA+TGG	0.409773	5:+38505736	MsaT027235.1:CDS
TTTCTTCAAGAACTTGTGCC+TGG	0.416423	5:+38506538	MsaT027235.1:CDS
ATGAATAGAGGGGATTTGAT+TGG	0.417188	5:+38505337	MsaT027235.1:CDS
TGATTCCGACAGAGGTGAAT+CGG	0.417204	5:+38505975	MsaT027235.1:CDS
GAAGCCTTAATTGTCGAACT+TGG	0.420693	5:-38506290	None:intergenic
GAATGATAAAAGCGAGGGTC+GGG	0.422825	5:+38505906	MsaT027235.1:CDS
TGTAGTTCTTGAGCTCTACT+AGG	0.427644	5:-38506215	None:intergenic
GTGATGTAGTGAACGCTTAT+GGG	0.431577	5:+38505695	MsaT027235.1:CDS
GGAATTAGGAAAGATGGGTT+TGG	0.432682	5:+38505481	MsaT027235.1:CDS
ATGGAACACTTGAAATTGGT+TGG	0.432972	5:+38505527	MsaT027235.1:CDS
AGCTCGTCCGCCCACACATC+AGG	0.433940	5:-38507770	None:intergenic
TTCGTCGAATTCACAAAACT+TGG	0.438619	5:+38505420	MsaT027235.1:CDS
CGGGCCGGGTCTCAAGATGA+AGG	0.439323	5:+38505925	MsaT027235.1:CDS
GATGGGTTTGGCTTTGGAAG+AGG	0.440982	5:+38505493	MsaT027235.1:CDS
GTTCGACAATTAAGGCTTCT+GGG	0.445541	5:+38506294	MsaT027235.1:CDS
GTCACCATCTGTTGAGCAAT+TGG	0.446286	5:+38505861	MsaT027235.1:CDS
TAATTGTCGAACTTGGTTGT+TGG	0.452756	5:-38506283	None:intergenic
CAATTGGAATTAGGAAAGAT+GGG	0.455462	5:+38505476	MsaT027235.1:CDS
CACTGGTAAGGCAGTGATGC+TGG	0.456491	5:+38506673	MsaT027235.1:CDS
GCTCAAGAACTACAAATTGA+AGG	0.456974	5:+38506224	MsaT027235.1:CDS
GTCATGTTCATCTGCCTCAA+TGG	0.457257	5:+38505366	MsaT027235.1:CDS
ACCGTTGAGTGGAGGATTCA+AGG	0.457519	5:+38507477	MsaT027235.1:CDS
GTAGCTGCTTCAACCACATT+CGG	0.459711	5:-38505829	None:intergenic
CCGGTTCAATTCATGGAACT+AGG	0.462018	5:+38505743	MsaT027235.1:CDS
AATAGTTCTTCGAAGGATAT+CGG	0.462281	5:-38507440	None:intergenic
TGCAAATTCATCTGTTGGGT+TGG	0.463783	5:+38505291	MsaT027235.1:CDS
GTTGTTGGTCACCCTTCTGT+TGG	0.463868	5:-38506268	None:intergenic
AGGAGGAATACATACATGTC+AGG	0.465382	5:+38506357	MsaT027235.1:CDS
GACGAATGGTCCCAAAAGTT+AGG	0.467097	5:-38505403	None:intergenic
CTTTCATCATAGCATTAGCC+TGG	0.468303	5:-38505552	None:intergenic
GGAAGAGGTGGTCATGATCA+TGG	0.471227	5:+38505508	MsaT027235.1:CDS
TTACCCTCTCTGCAAGGCTA+TGG	0.472298	5:-38506406	None:intergenic
CAGCCATAGCCTTGCAGAGA+GGG	0.475539	5:+38506403	MsaT027235.1:CDS
CATACATGTCAGGGCTCGCC+GGG	0.476438	5:+38506367	MsaT027235.1:CDS
AGGCTAATGCTATGATGAAA+GGG	0.479565	5:+38505554	MsaT027235.1:CDS
CCTAGTTCCATGAATTGAAC+CGG	0.480473	5:-38505743	None:intergenic
AGGATTCAAGGAGCCAAATC+AGG	0.482445	5:+38507489	MsaT027235.1:CDS
TTTGCACCAAATCTCCAATC+AGG	0.483200	5:-38505274	None:intergenic
AGTTTGTACCATCCACATCT+TGG	0.483306	5:-38507841	None:intergenic
CTTCCCTTCATCTTGAGACC+CGG	0.484549	5:-38505929	None:intergenic
TTTGGTGCAAATTCATCTGT+TGG	0.488720	5:+38505286	MsaT027235.1:CDS
ATGTTTGCAGGTCACTGGTA+AGG	0.491200	5:+38506661	MsaT027235.1:intron
ATCCACATCTTGGCTACTCA+TGG	0.492286	5:-38507831	None:intergenic
GATAAAAGCGAGGGTCGGGC+CGG	0.496645	5:+38505910	MsaT027235.1:CDS
AAGGACTAAACTCGAAGAAA+AGG	0.496988	5:+38506076	MsaT027235.1:CDS
CAATCCATGGCGATGTATGC+CGG	0.498492	5:+38505724	MsaT027235.1:CDS
AAAGAAAAGTTTGAGGTGGA+TGG	0.498732	5:+38505205	MsaT027235.1:CDS
GTATGCCATTGCCACCTGAT+TGG	0.499265	5:+38505260	MsaT027235.1:CDS
GATTCCGACAGAGGTGAATC+GGG	0.499637	5:+38505976	MsaT027235.1:CDS
AACTTACATCTTTAGCAAGA+AGG	0.504065	5:-38507196	None:intergenic
TTGGTGCAAATTCATCTGTT+GGG	0.505316	5:+38505287	MsaT027235.1:CDS
AGGGATGCTCTTGCAGGCGT+TGG	0.507541	5:+38505763	MsaT027235.1:CDS
ACATACATGTCAGGGCTCGC+CGG	0.509883	5:+38506366	MsaT027235.1:CDS
CAGATTCTTCACCAACGGCC+TGG	0.510859	5:+38507307	MsaT027235.1:intron
ATACCACTAGAATAACTCAT+AGG	0.511749	5:-38505241	None:intergenic
AAAGCCACCTTGCTGCATCC+AGG	0.516400	5:-38506556	None:intergenic
ACAAGATGGTTCCCCAATGT+TGG	0.518258	5:+38506023	MsaT027235.1:CDS
ATTCTATGAGTATGAATAGA+GGG	0.526004	5:+38505326	MsaT027235.1:CDS
GTGGTTGAAGCAGCTACAAA+AGG	0.527400	5:+38505835	MsaT027235.1:CDS
TGTTGATGTTTGCAGGTCAC+TGG	0.529088	5:+38506656	MsaT027235.1:intron
GAAAAGGAAAAGAAGTGGAC+AGG	0.529299	5:+38506092	MsaT027235.1:CDS
AATTCTATGAGTATGAATAG+AGG	0.529332	5:+38505325	MsaT027235.1:CDS
TGCTTTAGATGCCTGATGTG+TGG	0.531312	5:+38507759	MsaT027235.1:intron
GCATACATCGCCATGGATTG+AGG	0.532580	5:-38505721	None:intergenic
GGGTTTGGCTTTGGAAGAGG+TGG	0.532994	5:+38505496	MsaT027235.1:CDS
CAGGCTAATGCTATGATGAA+AGG	0.533203	5:+38505553	MsaT027235.1:CDS
CCTAGTGTGGATGAAGGACC+AGG	0.537537	5:-38507325	None:intergenic
CTAGTAGTACCTTCCAACAT+TGG	0.537550	5:-38506036	None:intergenic
CCTGGTTGAGATGGATGTAA+TGG	0.538930	5:-38507379	None:intergenic
GGCTGTTTGTTGCTTGACCC+CGG	0.540075	5:-38506385	None:intergenic
GGTGACGATGATGGTGGTCG+TGG	0.540368	5:+38505997	MsaT027235.1:CDS
TGAATCATCCCTGGTTGAGA+TGG	0.540521	5:-38507388	None:intergenic
GGATCATCACTCTCTTGTGT+TGG	0.542048	5:-38505808	None:intergenic
ATAAAAGCGAGGGTCGGGCC+GGG	0.545728	5:+38505911	MsaT027235.1:CDS
TGCAACAGTAAATCCACGGC+TGG	0.549394	5:+38507157	MsaT027235.1:CDS
TCAAAATTCTGATCCACCTA+AGG	0.553749	5:+38506337	MsaT027235.1:CDS
CCATTACATCCATCTCAACC+AGG	0.557186	5:+38507379	MsaT027235.1:CDS
CCTGGTCCTTCATCCACACT+AGG	0.558930	5:+38507325	MsaT027235.1:CDS
GTTGGACTTCGAGTAGCAAA+TGG	0.559598	5:+38505781	MsaT027235.1:CDS
CGGTTCAATTCATGGAACTA+GGG	0.563315	5:+38505744	MsaT027235.1:CDS
TCGTCGAATTCACAAAACTT+GGG	0.563821	5:+38505421	MsaT027235.1:CDS
GGTGGTCGTGGCGGACAAGA+TGG	0.564269	5:+38506009	MsaT027235.1:CDS
GAGTGACAAAGAAAAGTTTG+AGG	0.565967	5:+38505198	MsaT027235.1:CDS
GTTTGAGGTGGATGGAAATG+AGG	0.566256	5:+38505213	MsaT027235.1:CDS
ACTTGAAATTGGTTGGAACC+AGG	0.567324	5:+38505534	MsaT027235.1:CDS
AGTGGAGAGCCTTCTATGAA+AGG	0.567968	5:+38506057	MsaT027235.1:CDS
ATGTTCATCTGCCTCAATGG+TGG	0.569853	5:+38505369	MsaT027235.1:CDS
TCCTTGAATCCTCCACTCAA+CGG	0.571453	5:-38507478	None:intergenic
GCTTTAGATGCCTGATGTGT+GGG	0.574539	5:+38507760	MsaT027235.1:intron
TCAATCAGTGATTCCAAACA+TGG	0.574687	5:+38507408	MsaT027235.1:CDS
TCGATAAAACCAGAATCAGT+AGG	0.575351	5:-38505631	None:intergenic
TTATGGGGTTCCTCAATCCA+TGG	0.575365	5:+38505711	MsaT027235.1:CDS
TTCTTCGAAGGATATCGGAC+GGG	0.577452	5:-38507435	None:intergenic
GGAAATCCTAGTGTGGATGA+AGG	0.585198	5:-38507331	None:intergenic
ATGTTGGAAGGTACTACTAG+TGG	0.587812	5:+38506039	MsaT027235.1:CDS
TCCACATCTTGGCTACTCAT+GGG	0.588110	5:-38507830	None:intergenic
GGTGAATCGGGTGACGATGA+TGG	0.589027	5:+38505988	MsaT027235.1:CDS
TCGAAGAAAAGGAAAAGAAG+TGG	0.595035	5:+38506087	MsaT027235.1:CDS
AATCTCCAATCAGGTGGCAA+TGG	0.596638	5:-38505265	None:intergenic
ATCACTGATTGAATCATCCC+TGG	0.597295	5:-38507397	None:intergenic
GATGGTTCCCCAATGTTGGA+AGG	0.604783	5:+38506027	MsaT027235.1:CDS
TGAGGTGGATGGAAATGAGG+AGG	0.606986	5:+38505216	MsaT027235.1:CDS
GTGTATGAATAGTTCTTCGA+AGG	0.607675	5:-38507447	None:intergenic
GGAGGAATACATACATGTCA+GGG	0.608924	5:+38506358	MsaT027235.1:CDS
ACTACAAATTGAAGGTGCAA+AGG	0.610606	5:+38506232	MsaT027235.1:CDS
TCTGGGAAGAATGCCAAACA+GGG	0.611782	5:+38506311	MsaT027235.1:CDS
AAATTCTGATCCACCTAAGG+AGG	0.612050	5:+38506340	MsaT027235.1:CDS
TTTCATCTGATTTGCTGCCG+TGG	0.612141	5:-38508086	None:intergenic
GTAGCCAATTGCTCAACAGA+TGG	0.612683	5:-38505865	None:intergenic
TGTATGTATTCCTCCTTAGG+TGG	0.613419	5:-38506350	None:intergenic
AGAATGATAAAAGCGAGGGT+CGG	0.617597	5:+38505905	MsaT027235.1:CDS
ACTGTCAGATTCTTCACCAA+CGG	0.618604	5:+38507302	MsaT027235.1:intron
TTTGAAGAATGATAAAAGCG+AGG	0.619913	5:+38505900	MsaT027235.1:CDS
GTTCTTCGAAGGATATCGGA+CGG	0.621658	5:-38507436	None:intergenic
GTCACTTCAACGACAAGTTG+AGG	0.622054	5:+38506718	MsaT027235.1:CDS
GACGATGATGGTGGTCGTGG+CGG	0.622075	5:+38506000	MsaT027235.1:CDS
ACACAGTTAACACCGTTGAG+TGG	0.622575	5:+38507466	MsaT027235.1:CDS
GGCTAATGCTATGATGAAAG+GGG	0.622867	5:+38505555	MsaT027235.1:CDS
AATGTTAATGATTCCGACAG+AGG	0.622946	5:+38505967	MsaT027235.1:CDS
CAACCCTGAGAACCAACAGA+AGG	0.624229	5:+38506256	MsaT027235.1:CDS
TGATGTAGTGAACGCTTATG+GGG	0.624550	5:+38505696	MsaT027235.1:CDS
AGTAAATGAGTCCACCATTG+AGG	0.626203	5:-38505380	None:intergenic
TTGAAGAATGATAAAAGCGA+GGG	0.626379	5:+38505901	MsaT027235.1:CDS
TTCTATGAGTATGAATAGAG+GGG	0.627112	5:+38505327	MsaT027235.1:CDS
CAGTTAACACCGTTGAGTGG+AGG	0.628541	5:+38507469	MsaT027235.1:CDS
AAATTCATTGACATCTCTAG+AGG	0.629470	5:-38507352	None:intergenic
GTCACCCGATTCACCTCTGT+CGG	0.629653	5:-38505980	None:intergenic
AACTTGCAACAGTAAATCCA+CGG	0.632130	5:+38507153	MsaT027235.1:CDS
CTCTAGAGGAAATCCTAGTG+TGG	0.634071	5:-38507338	None:intergenic
ATGAGTAGCCAAGATGTGGA+TGG	0.639201	5:+38507833	MsaT027235.1:CDS
AATGCTATGATGAAAGGGGA+TGG	0.640341	5:+38505559	MsaT027235.1:CDS
TGAACCGGCATACATCGCCA+TGG	0.640711	5:-38505728	None:intergenic
AACCCTGAGAACCAACAGAA+GGG	0.641900	5:+38506257	MsaT027235.1:CDS
TGTATCTTACCCTCTCTGCA+AGG	0.649854	5:-38506412	None:intergenic
TGACAAAGAAAAGTTTGAGG+TGG	0.652348	5:+38505201	MsaT027235.1:CDS
GGGCCGGGTCTCAAGATGAA+GGG	0.654605	5:+38505926	MsaT027235.1:CDS
TGGATGAAGGACCAGGCCGT+TGG	0.658029	5:-38507318	None:intergenic
GCACCAAATCTCCAATCAGG+TGG	0.660162	5:-38505271	None:intergenic
TCCCATGAGTAGCCAAGATG+TGG	0.669295	5:+38507829	MsaT027235.1:CDS
AGTAGTACCTTCCAACATTG+GGG	0.673147	5:-38506034	None:intergenic
GATCCTATGAGTTATTCTAG+TGG	0.678062	5:+38505238	MsaT027235.1:CDS
TTAGATGCCTGATGTGTGGG+CGG	0.683943	5:+38507763	MsaT027235.1:intron
CATTACATCCATCTCAACCA+GGG	0.684099	5:+38507380	MsaT027235.1:CDS
GGTTGAGATGGATGTAATGG+AGG	0.685510	5:-38507376	None:intergenic
TCAATATTGAAATCCAGCCG+TGG	0.686618	5:-38507170	None:intergenic
GGACTTCGAGTAGCAAATGG+AGG	0.689394	5:+38505784	MsaT027235.1:CDS
AGAGAGTGATGATCCGAATG+TGG	0.704038	5:+38505816	MsaT027235.1:CDS
GGAAACTGAGATAAACTCTG+AGG	0.706311	5:-38505610	None:intergenic
ACTTGTGCCTGGATGCAGCA+AGG	0.709020	5:+38506549	MsaT027235.1:CDS
ACACGCTCTTGTAGGTACCA+CGG	0.719344	5:+38508069	MsaT027235.1:intron
GAATCGGGTGACGATGATGG+TGG	0.722378	5:+38505991	MsaT027235.1:CDS
ATACATGTCAGGGCTCGCCG+GGG	0.730260	5:+38506368	MsaT027235.1:CDS
ACAGCCATAGCCTTGCAGAG+AGG	0.735764	5:+38506402	MsaT027235.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	38505196	38508120	38505196	ID=MsaG027235
Chr5	mRNA	38505196	38508120	38505196	ID=MsaT027235.1;Parent=MsaG027235
Chr5	exon	38505196	38506113	38505196	ID=MsaT027235.1.exon1;Parent=MsaT027235.1
Chr5	CDS	38505196	38506113	38505196	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38506197	38506424	38506197	ID=MsaT027235.1.exon2;Parent=MsaT027235.1
Chr5	CDS	38506197	38506424	38506197	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38506505	38506570	38506505	ID=MsaT027235.1.exon3;Parent=MsaT027235.1
Chr5	CDS	38506505	38506570	38506505	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38506671	38506739	38506671	ID=MsaT027235.1.exon4;Parent=MsaT027235.1
Chr5	CDS	38506671	38506739	38506671	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38507140	38507211	38507140	ID=MsaT027235.1.exon5;Parent=MsaT027235.1
Chr5	CDS	38507140	38507211	38507140	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38507310	38507510	38507310	ID=MsaT027235.1.exon6;Parent=MsaT027235.1
Chr5	CDS	38507310	38507510	38507310	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38507767	38507854	38507767	ID=MsaT027235.1.exon7;Parent=MsaT027235.1
Chr5	CDS	38507767	38507854	38507767	ID=cds.MsaT027235.1;Parent=MsaT027235.1
Chr5	exon	38508083	38508120	38508083	ID=MsaT027235.1.exon8;Parent=MsaT027235.1
Chr5	CDS	38508083	38508120	38508083	ID=cds.MsaT027235.1;Parent=MsaT027235.1

Gene Sequence

>MsaT027235.1

ATGAGTGACAAAGAAAAGTTTGAGGTGGATGGAAATGAGGAGGATCCTATGAGTTATTCTAGTGGTATGCCATTGCCACCTGATTGGAGATTTGGTGCAAATTCATCTGTTGGGTTGGTTTCAATTGGGAATTCTATGAGTATGAATAGAGGGGATTTGATTGGTTCTTCGTCATGTTCATCTGCCTCAATGGTGGACTCATTTACTCCTAACTTTTGGGACCATTCGTCGAATTCACAAAACTTGGGATTTTGTGACATTAATGGGAGTTCTTCAAATACAATTGGAATTAGGAAAGATGGGTTTGGCTTTGGAAGAGGTGGTCATGATCATGGAACACTTGAAATTGGTTGGAACCAGGCTAATGCTATGATGAAAGGGGATGGTTTTTTACCGAATGGACAAGGTGTTTTTCCTCAGAGTTTATCTCAGTTTCCTACTGATTCTGGTTTTATCGAAAGGGCTGCGAGGTTCTCGTGTTTTGGTGGAGGGAATTTCAGTGATGTAGTGAACGCTTATGGGGTTCCTCAATCCATGGCGATGTATGCCGGTTCAATTCATGGAACTAGGGATGCTCTTGCAGGCGTTGGACTTCGAGTAGCAAATGGAGGACCAACACAAGAGAGTGATGATCCGAATGTGGTTGAAGCAGCTACAAAAGGTGTGTCACCATCTGTTGAGCAATTGGCTACTAGAGAAAGTCCTTTGAAGAATGATAAAAGCGAGGGTCGGGCCGGGTCTCAAGATGAAGGGAAGCAAGCTCTTGTTCAGAATGTTAATGATTCCGACAGAGGTGAATCGGGTGACGATGATGGTGGTCGTGGCGGACAAGATGGTTCCCCAATGTTGGAAGGTACTACTAGTGGAGAGCCTTCTATGAAAGGACTAAACTCGAAGAAAAGGAAAAGAAGTGGACAGGATGCTGATAATGATAAACCTAGTAGAGCTCAAGAACTACAAATTGAAGGTGCAAAGGACAACCCTGAGAACCAACAGAAGGGTGACCAACAACCAAGTTCGACAATTAAGGCTTCTGGGAAGAATGCCAAACAGGGCTCTCAAAATTCTGATCCACCTAAGGAGGAATACATACATGTCAGGGCTCGCCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGGGTGAGGAGGGAAAAAATAAGTGAGAGGATGAAGTTTCTTCAAGAACTTGTGCCTGGATGCAGCAAGGTCACTGGTAAGGCAGTGATGCTGGATGAAATCATCAACTATGTACAGTCACTTCAACGACAAGTTGAGTTTTTGTCCATGAAACTTGCAACAGTAAATCCACGGCTGGATTTCAATATTGAAAGCCTTCTTGCTAAAGATATTCTTCACCAACGGCCTGGTCCTTCATCCACACTAGGATTTCCTCTAGAGATGTCAATGAATTTTCCTCCATTACATCCATCTCAACCAGGGATGATTCAATCAGTGATTCCAAACATGGCAAACCCGTCCGATATCCTTCGAAGAACTATTCATACACAGTTAACACCGTTGAGTGGAGGATTCAAGGAGCCAAATCAGATGCCTGATGTGTGGGCGGACGAGCTTCACAATGTTGTACAAATGAGCTTTGCAACAACTGCTCCCATGAGTAGCCAAGATGTGGATGGTACCACGGCAGCAAATCAGATGAAAGCTGAACTTTGA

Protein sequence

>MsaT027235.1

MSDKEKFEVDGNEEDPMSYSSGMPLPPDWRFGANSSVGLVSIGNSMSMNRGDLIGSSSCSSASMVDSFTPNFWDHSSNSQNLGFCDINGSSSNTIGIRKDGFGFGRGGHDHGTLEIGWNQANAMMKGDGFLPNGQGVFPQSLSQFPTDSGFIERAARFSCFGGGNFSDVVNAYGVPQSMAMYAGSIHGTRDALAGVGLRVANGGPTQESDDPNVVEAATKGVSPSVEQLATRESPLKNDKSEGRAGSQDEGKQALVQNVNDSDRGESGDDDGGRGGQDGSPMLEGTTSGEPSMKGLNSKKRKRSGQDADNDKPSRAQELQIEGAKDNPENQQKGDQQPSSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLLAKDILHQRPGPSSTLGFPLEMSMNFPPLHPSQPGMIQSVIPNMANPSDILRRTIHTQLTPLSGGFKEPNQMPDVWADELHNVVQMSFATTAPMSSQDVDGTTAANQMKAEL*