AlfalfaGEDB | MsaG027602

M. sativa ssp. caerulea / MsaG027602

KEGG: -
GO: GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141
PFAM: PF02362.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027602	XP_024640656.1	89.406	387	28	3	1	384	1	377	0.0	691

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027602	sp\|Q84WU6\|ARFQ_ARATH	34.483	377	191	13	8	341	15	378	6.90e-57	198

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027602	tr\|A0A396HRU8\|A0A396HRU8_MEDTR	89.406	387	28	3	1	384	1	377	0.0	691

TFs/TRs:

Gene ID	Type	Classification
MsaG027602	TF	B3-ARF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000179	MsaG027602	0.816303	1.028753e-51	2.055521e-49
MsaG000439	MsaG027602	0.825410	8.450697e-54	2.149825e-51
MsaG002563	MsaG027602	0.801332	1.585734e-48	2.209519e-46
MsaG003381	MsaG027602	0.819446	2.023056e-52	4.384772e-50
MsaG003461	MsaG027602	0.802853	7.746332e-49	1.117389e-46
MsaG003937	MsaG027602	0.820689	1.054001e-52	2.360615e-50
MsaG004030	MsaG027602	0.817443	5.725040e-52	1.177933e-49
MsaG004273	MsaG027602	0.815787	1.339711e-51	2.641849e-49
MsaG004314	MsaG027602	0.804124	4.234381e-49	6.290586e-47
MsaG005387	MsaG027602	0.865912	8.385456e-65	8.216135e-62
MsaG005447	MsaG027602	0.821368	7.363549e-53	1.679183e-50
MsaG007866	MsaG027602	0.831318	3.221371e-55	9.682253e-53
MsaG008392	MsaG027602	0.802163	1.072891e-48	1.523407e-46
MsaG008480	MsaG027602	0.817328	6.074921e-52	1.246219e-49
MsaG008631	MsaG027602	0.818830	2.789175e-52	5.948208e-50
MsaG008915	MsaG027602	0.800310	2.557896e-48	3.482680e-46
MsaG009848	MsaG027602	0.803454	5.823687e-49	8.518204e-47
MsaG010862	MsaG027602	0.832674	1.495601e-55	4.676170e-53
MsaG010945	MsaG027602	0.800185	2.711673e-48	3.681607e-46
MsaG011044	MsaG027602	0.827089	3.382865e-54	9.017419e-52
MsaG011256	MsaG027602	0.819562	1.903782e-52	4.138685e-50
MsaG011813	MsaG027602	0.825207	9.432336e-54	2.386237e-51
MsaG012444	MsaG027602	0.800993	1.859555e-48	2.571153e-46
MsaG012490	MsaG027602	0.801216	1.674603e-48	2.327101e-46
MsaG012609	MsaG027602	0.816338	1.010724e-51	2.021273e-49
MsaG045648	MsaG027602	0.806280	1.504969e-49	2.351149e-47
MsaG045652	MsaG027602	0.842297	5.241219e-58	2.200248e-55
MsaG046094	MsaG027602	0.823062	2.992108e-53	7.140394e-51
MsaG046099	MsaG027602	0.814116	3.132633e-51	5.922397e-49
MsaG046537	MsaG027602	0.802188	1.060199e-48	1.506252e-46
MsaG046930	MsaG027602	0.807215	9.570136e-50	1.528369e-47
MsaG002582	MsaG027602	0.801327	1.589541e-48	2.214553e-46
MsaG010136	MsaG027602	0.848556	1.077062e-59	5.557157e-57
MsaG008702	MsaG027602	0.800930	1.914864e-48	2.643881e-46
MsaG014189	MsaG027602	0.831846	2.391704e-55	7.300892e-53
MsaG027945	MsaG027602	0.810606	1.815292e-50	3.146075e-48
MsaG027602	MsaG028977	0.811484	1.173305e-50	2.077675e-48
MsaG027602	MsaG030696	0.838585	4.847522e-57	1.810482e-54
MsaG027602	MsaG032953	0.818355	3.570696e-52	7.521288e-50
MsaG015318	MsaG027602	0.810194	2.224916e-50	3.817441e-48
MsaG016174	MsaG027602	0.829778	7.643625e-55	2.198078e-52
MsaG016269	MsaG027602	0.803702	5.176555e-49	7.615358e-47
MsaG017322	MsaG027602	0.818362	3.556519e-52	7.492934e-50
MsaG017482	MsaG027602	0.801878	1.227155e-48	1.731202e-46
MsaG017588	MsaG027602	0.802322	9.951963e-49	1.418309e-46
MsaG018626	MsaG027602	0.877635	1.121567e-68	1.815313e-65
MsaG018653	MsaG027602	0.809102	3.809873e-50	6.366824e-48
MsaG018966	MsaG027602	0.808134	6.119975e-50	9.991399e-48
MsaG019017	MsaG027602	0.807835	7.080388e-50	1.147672e-47
MsaG020497	MsaG027602	0.833323	1.033219e-55	3.292626e-53
MsaG021301	MsaG027602	0.812343	7.644006e-51	1.382502e-48
MsaG021868	MsaG027602	0.801123	1.749435e-48	2.426027e-46
MsaG025440	MsaG027602	0.800205	2.687234e-48	3.650017e-46
MsaG027051	MsaG027602	0.810801	1.647717e-50	2.869331e-48
MsaG027467	MsaG027602	0.848052	1.482324e-59	7.520254e-57
MsaG028530	MsaG027602	0.824125	1.692143e-53	4.156179e-51
MsaG029273	MsaG027602	0.809479	3.165799e-50	5.338913e-48
MsaG029838	MsaG027602	0.825950	6.300300e-54	1.627120e-51
MsaG029963	MsaG027602	0.831205	3.434549e-55	1.028868e-52
MsaG030864	MsaG027602	0.842398	4.929638e-58	2.076336e-55
MsaG031328	MsaG027602	0.848924	8.522171e-60	4.452473e-57
MsaG035104	MsaG027602	0.813817	3.643448e-51	6.836971e-49
MsaG035675	MsaG027602	0.824563	1.336290e-53	3.321546e-51
MsaG039410	MsaG027602	0.810475	1.936252e-50	3.345157e-48
MsaG039673	MsaG027602	0.841909	6.632603e-58	2.750289e-55
MsaG039840	MsaG027602	0.814761	2.259050e-51	4.340706e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027602	MtrunA17_Chr5g0425261	89.406	387	28	3	1	384	1	377	0.0	691
MsaG027602	MtrunA17_Chr5g0424801	88.372	387	32	3	1	384	1	377	0.0	681
MsaG027602	MtrunA17_Chr5g0424741	53.555	422	138	9	1	372	1	414	5.04e-128	378
MsaG027602	MtrunA17_Chr5g0424931	53.000	400	142	10	1	369	8	392	2.08e-125	371
MsaG027602	MtrunA17_Chr1g0178011	52.332	386	143	11	1	369	1	362	1.03e-113	339
MsaG027602	MtrunA17_Chr2g0289221	48.725	353	129	15	1	320	9	342	1.55e-92	281
MsaG027602	MtrunA17_Chr5g0417281	48.256	344	148	10	8	340	7	331	1.77e-91	284
MsaG027602	MtrunA17_Chr5g0417211	51.757	313	123	9	1	298	1	300	1.62e-85	265
MsaG027602	MtrunA17_Chr5g0436761	45.014	351	159	11	6	341	6	337	4.99e-84	263
MsaG027602	MtrunA17_Chr2g0277461	43.702	389	183	15	6	379	7	374	1.68e-81	256
MsaG027602	MtrunA17_Chr2g0277531	43.234	303	153	8	6	296	14	309	3.29e-72	228
MsaG027602	MtrunA17_Chr5g0425661	56.784	199	70	7	9	195	34	228	2.40e-63	202
MsaG027602	MtrunA17_Chr3g0115271	33.094	417	206	11	12	383	19	407	6.47e-57	196
MsaG027602	MtrunA17_Chr1g0199681	34.532	417	188	18	9	366	91	481	3.55e-53	187
MsaG027602	MtrunA17_Chr1g0181211	35.768	397	182	14	9	346	24	406	9.70e-53	186
MsaG027602	MtrunA17_Chr5g0424791	66.901	142	43	2	61	200	12	151	2.57e-52	171
MsaG027602	MtrunA17_Chr2g0326761	34.635	384	185	13	9	341	8	376	4.71e-52	184
MsaG027602	MtrunA17_Chr4g0028971	35.443	395	182	14	9	345	9	388	1.80e-48	174
MsaG027602	MtrunA17_Chr7g0264171	30.049	406	203	13	9	349	28	417	2.03e-46	167
MsaG027602	MtrunA17_Chr7g0264161	33.110	299	164	10	22	300	2	284	3.99e-41	147
MsaG027602	MtrunA17_Chr2g0282961	29.231	390	233	16	4	369	43	413	8.97e-39	146
MsaG027602	MtrunA17_Chr5g0425651	58.974	117	42	2	227	343	1	111	2.85e-36	128
MsaG027602	MtrunA17_Chr4g0009751	27.747	364	242	8	10	363	17	369	1.85e-34	134
MsaG027602	MtrunA17_Chr7g0239061	28.065	367	236	11	12	364	14	366	1.00e-33	132
MsaG027602	MtrunA17_Chr2g0285461	29.477	363	222	12	9	348	20	371	1.30e-33	132
MsaG027602	MtrunA17_Chr2g0276781	27.621	391	233	11	12	376	23	389	1.66e-33	132
MsaG027602	MtrunA17_Chr4g0046371	29.111	371	215	16	12	356	38	386	1.48e-32	129
MsaG027602	MtrunA17_Chr8g0346711	28.969	359	224	11	12	357	29	369	6.16e-32	127
MsaG027602	MtrunA17_Chr8g0385791	27.095	358	223	8	12	348	59	399	7.98e-32	127
MsaG027602	MtrunA17_Chr8g0376771	28.150	373	213	14	9	348	20	370	1.53e-30	123
MsaG027602	MtrunA17_Chr5g0433301	28.940	349	220	11	9	340	21	358	4.63e-30	122
MsaG027602	MtrunA17_Chr1g0156321	30.717	293	187	8	9	287	40	330	5.10e-30	122
MsaG027602	MtrunA17_Chr4g0070181	27.666	347	225	10	9	340	20	355	3.96e-29	119
MsaG027602	MtrunA17_Chr3g0109391	29.412	306	196	8	9	300	23	322	4.68e-29	119
MsaG027602	MtrunA17_Chr2g0301251	28.324	346	224	11	9	340	20	355	1.63e-28	117
MsaG027602	MtrunA17_Chr4g0029671	27.990	393	239	15	12	376	54	430	3.70e-26	110
MsaG027602	MtrunA17_Chr8g0389081	28.291	357	212	12	9	340	29	366	9.28e-26	109
MsaG027602	MtrunA17_Chr2g0326281	27.805	410	242	16	12	381	56	451	1.34e-24	105
MsaG027602	MtrunA17_Chr5g0419861	35.897	117	69	3	50	160	12	128	1.22e-13	67.4
MsaG027602	MtrunA17_Chr8g0356211	28.834	163	102	6	125	276	9	168	1.03e-12	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027602	AT1G77850.2	34.483	377	191	13	8	341	15	378	6.09e-58	199
MsaG027602	AT1G77850.1	34.483	377	191	13	8	341	15	378	7.01e-58	198
MsaG027602	AT4G30080.1	35.354	396	190	15	9	352	16	397	3.11e-50	179
MsaG027602	AT2G28350.2	32.832	399	188	15	9	345	7	387	8.02e-47	169
MsaG027602	AT2G28350.1	32.832	399	188	15	9	345	7	387	8.08e-47	170
MsaG027602	AT2G46530.3	30.623	369	224	10	11	363	41	393	9.09e-42	155
MsaG027602	AT2G46530.1	30.623	369	224	10	11	363	20	372	9.76e-42	155
MsaG027602	AT3G61830.1	29.301	372	236	9	11	368	24	382	1.56e-40	151
MsaG027602	AT1G34390.1	30.343	379	218	15	12	369	27	380	2.10e-36	140
MsaG027602	AT1G35520.1	30.570	386	210	15	12	369	27	382	1.64e-35	137
MsaG027602	AT1G59750.2	30.179	391	229	14	12	379	22	391	3.34e-35	137
MsaG027602	AT1G59750.1	30.579	363	213	13	12	356	22	363	5.71e-35	136
MsaG027602	AT1G59750.3	30.579	363	213	13	12	356	22	363	5.71e-35	136
MsaG027602	AT1G59750.4	30.579	363	213	13	12	356	22	363	5.74e-35	136
MsaG027602	AT5G62000.2	27.933	358	222	9	12	349	61	402	4.64e-34	134
MsaG027602	AT5G62000.5	27.933	358	222	9	12	349	61	402	4.64e-34	134
MsaG027602	AT5G62000.3	27.933	358	222	9	12	349	61	402	4.64e-34	134
MsaG027602	AT5G62000.1	27.933	358	222	9	12	349	61	402	4.64e-34	134
MsaG027602	AT5G62000.4	27.933	358	222	9	12	349	61	402	6.43e-34	134
MsaG027602	AT1G34410.1	29.793	386	213	15	12	369	27	382	8.58e-34	132
MsaG027602	AT4G23980.2	28.125	352	223	11	12	345	12	351	2.30e-33	131
MsaG027602	AT4G23980.1	28.125	352	223	11	12	345	12	351	2.49e-33	131
MsaG027602	AT1G35540.1	29.948	384	215	16	12	369	27	382	5.70e-33	130
MsaG027602	AT1G34310.1	30.663	362	199	14	9	346	24	357	7.15e-33	130
MsaG027602	AT1G30330.1	29.006	362	225	11	9	348	20	371	3.31e-32	129
MsaG027602	AT1G30330.3	29.006	362	225	11	9	348	22	373	3.64e-32	129
MsaG027602	AT1G30330.2	29.006	362	225	11	9	348	22	373	3.64e-32	129
MsaG027602	AT1G35240.1	30.312	353	195	14	12	340	27	352	4.18e-32	127
MsaG027602	AT5G37020.2	30.000	350	215	13	9	340	19	356	5.90e-32	128
MsaG027602	AT2G33860.1	29.188	394	227	15	12	383	54	417	7.18e-32	127
MsaG027602	AT5G37020.1	30.000	350	215	13	9	340	19	356	8.08e-32	127
MsaG027602	AT1G34170.1	29.834	362	214	14	12	354	25	365	4.32e-31	124
MsaG027602	AT1G19220.1	27.794	349	222	10	9	340	20	355	6.69e-29	119
MsaG027602	AT1G19850.2	30.114	352	216	12	7	340	38	377	3.39e-28	117
MsaG027602	AT1G19850.1	30.114	352	216	12	7	340	49	388	3.92e-28	117
MsaG027602	AT1G43950.1	32.843	204	117	6	12	203	27	222	7.49e-28	109
MsaG027602	AT3G61830.2	28.750	320	206	7	59	368	24	331	1.56e-27	114
MsaG027602	AT5G60450.2	28.691	359	214	15	9	340	38	381	6.29e-27	113
MsaG027602	AT5G60450.1	28.691	359	214	15	9	340	62	405	6.66e-27	113
MsaG027602	AT5G20730.3	28.000	350	221	11	9	340	21	357	1.02e-26	112
MsaG027602	AT5G20730.1	28.000	350	221	11	9	340	21	357	1.07e-26	112
MsaG027602	AT5G20730.2	27.507	349	223	10	9	340	21	356	2.37e-26	111
MsaG027602	AT1G34170.2	28.177	362	194	14	12	354	25	339	6.86e-25	106
MsaG027602	AT1G34170.3	28.177	362	194	14	12	354	25	339	1.07e-24	106
MsaG027602	AT2G46530.2	29.658	263	162	8	111	363	36	285	2.38e-21	95.9
MsaG027602	AT2G33860.2	28.521	284	166	12	112	383	2	260	4.85e-18	85.9
MsaG027602	AT5G37020.3	29.339	242	147	10	112	340	31	261	9.50e-15	76.3

Find 100 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTACATATGCTTTCTTAATT+TGG	0.188909	5:+48709682	MsaT027602.1:CDS
CATATGTACCTGCGCCAATT+AGG	0.208457	5:-48709668	None:intergenic
GGCGCATATCTGCCATATTT+TGG	0.229689	5:-48708778	None:intergenic
AACTGATGAGATTAAGGTTT+TGG	0.252605	5:+48709406	MsaT027602.1:CDS
TAAACTTTAGAGTGAATCTT+TGG	0.260426	5:-48708819	None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG	0.268826	5:+48709654	MsaT027602.1:CDS
TGTCTCCAACATCGTCTTCT+TGG	0.287447	5:-48709046	None:intergenic
GATGACAATTTCTCAGCTTA+AGG	0.289847	5:+48709607	MsaT027602.1:CDS
GAATTTAACTGATGAGATTA+AGG	0.298587	5:+48709400	MsaT027602.1:CDS
CGACCCTGCCAAGGTTTGTT+GGG	0.299743	5:-48710280	None:intergenic
TGCCAAGGATTGACTAGGTT+TGG	0.313165	5:-48710162	None:intergenic
GATCTTTCCCAAGCTTGATT+TGG	0.314401	5:+48709148	MsaT027602.1:CDS
ATGAAGATTGGTTGGAAATC+TGG	0.337904	5:+48709536	MsaT027602.1:CDS
CTACTTCCCACGAGGTCATC+TGG	0.355762	5:+48708842	MsaT027602.1:CDS
TCGACCCTGCCAAGGTTTGT+TGG	0.360193	5:-48710281	None:intergenic
ATCTTTGGAATCTTGACGTC+GGG	0.375178	5:-48708804	None:intergenic
AGATTTCCAACCAATCTTCA+TGG	0.383662	5:-48709534	None:intergenic
TCCAACATCGTCTTCTTGGC+CGG	0.392440	5:-48709042	None:intergenic
ATGACAATTTCTCAGCTTAA+GGG	0.392754	5:+48709608	MsaT027602.1:CDS
ATATGTACCTGCGCCAATTA+GGG	0.395477	5:-48709667	None:intergenic
GCCGGGAACTACAGGAGGAG+GGG	0.417463	5:-48709024	None:intergenic
CGCTTCATCTGTAGTGAACT+TGG	0.424216	5:-48709363	None:intergenic
AATTCCGACAGATATCTTTC+CGG	0.425831	5:-48709330	None:intergenic
CTTGGTCAGTTACGGGAGTC+AGG	0.426329	5:-48708998	None:intergenic
TGGCCGGGAACTACAGGAGG+AGG	0.428083	5:-48709026	None:intergenic
CGACCTTAAAAGCCGAGAAT+GGG	0.441124	5:+48709196	MsaT027602.1:CDS
TGGAATCTTGACGTCGGGGC+CGG	0.443805	5:-48708799	None:intergenic
CTCGTGTGGAAACCAAAATA+TGG	0.443875	5:+48708766	MsaT027602.1:CDS
CCAAGGTTTGGCTATGTGTC+AGG	0.447799	5:-48710315	None:intergenic
GACTCGTCCAAATCAAGCTT+GGG	0.456946	5:-48709155	None:intergenic
TTGGATTCTGCGGGAAATCA+AGG	0.460568	5:-48710143	None:intergenic
GTGTATTATCCGACAGCTAT+TGG	0.461034	5:+48709470	MsaT027602.1:CDS
TCTTCTTGGCCGGGAACTAC+AGG	0.462528	5:-48709032	None:intergenic
TACGGGAGTCAGGAGCAGTT+TGG	0.469490	5:-48708988	None:intergenic
CCGGGAACTACAGGAGGAGG+GGG	0.475602	5:-48709023	None:intergenic
GTTGACGATGCCATGAAGAT+TGG	0.477758	5:+48709524	MsaT027602.1:CDS
TTATCATAGGTTAACTGGGA+TGG	0.480148	5:+48710120	MsaT027602.1:intron
GATGAAAACAACAGAATCGT+TGG	0.490573	5:-48709297	None:intergenic
AGACTCGTCCAAATCAAGCT+TGG	0.490804	5:-48709156	None:intergenic
GAAGATTCATATTTCTTCAA+AGG	0.492904	5:-48709575	None:intergenic
ATGGTTCTTGTGGCAGCAGT+AGG	0.493323	5:-48708882	None:intergenic
CCGACCTTAAAAGCCGAGAA+TGG	0.494002	5:+48709195	MsaT027602.1:CDS
GACCCTGCCAAGGTTTGTTG+GGG	0.496074	5:-48710279	None:intergenic
GGCGGAGTTGACGGTGGAGG+AGG	0.496620	5:-48710220	None:intergenic
TCATCCTCTGCCACCTCGTG+TGG	0.498372	5:+48708752	MsaT027602.1:CDS
TGAGGCGGAGTTGACGGTGG+AGG	0.507469	5:-48710223	None:intergenic
ATCCAAACCTAGTCAATCCT+TGG	0.508187	5:+48710160	MsaT027602.1:CDS
CAACCTGCCAAGGATTGACT+AGG	0.513736	5:-48710167	None:intergenic
GAGACGATGCATGGAATGGA+TGG	0.515792	5:-48708921	None:intergenic
CCAACATCGTCTTCTTGGCC+GGG	0.517848	5:-48709041	None:intergenic
GTTTCCACACGAGGTGGCAG+AGG	0.518116	5:-48708756	None:intergenic
AATCTAAGTAGATTACATAC+TGG	0.519388	5:+48709239	MsaT027602.1:CDS
AGAAGAGACGATGCATGGAA+TGG	0.522622	5:-48708925	None:intergenic
TGGTTCTTGTGGCAGCAGTA+GGG	0.533159	5:-48708881	None:intergenic
TGACTAGGTTTGGATTCTGC+GGG	0.536979	5:-48710152	None:intergenic
GATGAACTCTCAGCAAGTCT+AGG	0.537540	5:-48710255	None:intergenic
AGATATCTGTCGGAATTCGC+AGG	0.543135	5:+48709336	MsaT027602.1:CDS
ACTACAGATGAAGCGGATGA+AGG	0.543135	5:+48709371	MsaT027602.1:CDS
CCCTGCCAAGGTTTGTTGGG+GGG	0.543970	5:-48710277	None:intergenic
TTTGGATGCAGTGGAATTGG+CGG	0.544683	5:+48709424	MsaT027602.1:CDS
TTGTAAACTTCAACCTGCCA+AGG	0.544687	5:-48710177	None:intergenic
AAACCTAGTCAATCCTTGGC+AGG	0.546100	5:+48710164	MsaT027602.1:CDS
GAGGAGGAAGTCAAAGGTGC+AGG	0.548119	5:-48710204	None:intergenic
ACGATGCCATGAAGATTGGT+TGG	0.558168	5:+48709528	MsaT027602.1:CDS
ACCCTGCCAAGGTTTGTTGG+GGG	0.559662	5:-48710278	None:intergenic
TAAGTAGATTACATACTGGC+TGG	0.560711	5:+48709243	MsaT027602.1:CDS
GGTTCTTGTGGCAGCAGTAG+GGG	0.568653	5:-48708880	None:intergenic
TAATCTACTTAGATTTGCAT+AGG	0.573017	5:-48709231	None:intergenic
ATTATCCGACAGCTATTGGT+TGG	0.574808	5:+48709474	MsaT027602.1:CDS
GGCCGGGAACTACAGGAGGA+GGG	0.579671	5:-48709025	None:intergenic
TTGACTAGGTTTGGATTCTG+CGG	0.581555	5:-48710153	None:intergenic
TGGACGGTAACGATCAAGAA+TGG	0.583957	5:-48708901	None:intergenic
CAAGTTCACTACAGATGAAG+CGG	0.584809	5:+48709364	MsaT027602.1:CDS
AAAATATGGCAGATATGCGC+CGG	0.589425	5:+48708780	MsaT027602.1:CDS
CTAATGTCCCTAATTGGCGC+AGG	0.591939	5:+48709660	MsaT027602.1:CDS
CCCGGCCAAGAAGACGATGT+TGG	0.598087	5:+48709041	MsaT027602.1:CDS
TGACAATTTCTCAGCTTAAG+GGG	0.599563	5:+48709609	MsaT027602.1:CDS
TCAACAGAAGAGACGATGCA+TGG	0.604313	5:-48708930	None:intergenic
CAAACCTTGGCAGGGTCGAG+TGG	0.615213	5:+48710285	MsaT027602.1:CDS
GACCTTAAAAGCCGAGAATG+GGG	0.616896	5:+48709197	MsaT027602.1:CDS
CGATGCATGGAATGGATGGA+CGG	0.620709	5:-48708917	None:intergenic
ACAGATGAAGCGGATGAAGG+AGG	0.630115	5:+48709374	MsaT027602.1:CDS
AATCTTTGGAATCTTGACGT+CGG	0.630358	5:-48708805	None:intergenic
ACGATCAAGAATGGTTCTTG+TGG	0.631537	5:-48708892	None:intergenic
TCTTGAGGCGGAGTTGACGG+TGG	0.632846	5:-48710226	None:intergenic
TCACGCCAACCAATAGCTGT+CGG	0.635734	5:-48709479	None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG	0.637006	5:-48709078	None:intergenic
AGTACCACTCGACCCTGCCA+AGG	0.642496	5:-48710289	None:intergenic
TCTGCCGGAAAGATATCTGT+CGG	0.642648	5:+48709326	MsaT027602.1:CDS
TGTTGATTCTCACACCGACG+AGG	0.646008	5:+48708959	MsaT027602.1:CDS
ACCTTAAAAGCCGAGAATGG+GGG	0.652954	5:+48709198	MsaT027602.1:CDS
TCTTGGCCGGGAACTACAGG+AGG	0.657068	5:-48709029	None:intergenic
CAGTTTGGCAAAGACCTCGT+CGG	0.663811	5:-48708973	None:intergenic
AGGTGGCAGAGGATGAGACA+TGG	0.663852	5:-48708745	None:intergenic
TCTTTGGAATCTTGACGTCG+GGG	0.665271	5:-48708803	None:intergenic
ATCAAGTTAGAGCATTCGAT+AGG	0.670484	5:-48709128	None:intergenic
CATGTTCCAGATGACCTCGT+GGG	0.672658	5:-48708848	None:intergenic
GCATGTTCCAGATGACCTCG+TGG	0.672744	5:-48708849	None:intergenic
ACGGTGGAGGAGGAAGTCAA+AGG	0.680164	5:-48710210	None:intergenic
AAAGTTTACTACTTCCCACG+AGG	0.761653	5:+48708834	MsaT027602.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	48708747	48710326	48708747	ID=MsaG027602
Chr5	mRNA	48708747	48710326	48708747	ID=MsaT027602.1;Parent=MsaG027602
Chr5	exon	48708747	48709703	48708747	ID=MsaT027602.1.exon1;Parent=MsaT027602.1
Chr5	CDS	48708747	48709703	48708747	ID=cds.MsaT027602.1;Parent=MsaT027602.1
Chr5	exon	48710129	48710326	48710129	ID=MsaT027602.1.exon2;Parent=MsaT027602.1
Chr5	CDS	48710129	48710326	48710129	ID=cds.MsaT027602.1;Parent=MsaT027602.1

Gene Sequence

>MsaT027602.1

ATGTCTCATCCTCTGCCACCTCGTGTGGAAACCAAAATATGGCAGATATGCGCCGGCCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCATCTGGAACATGCATGTTCTTCCCCTACTGCTGCCACAAGAACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCGTCTCTTCTGTTGATCTCTTTGTTGATTCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTGACTCCCGTAACTGACCAAGAACCCCCTCCTCCTGTAGTTCCCGGCCAAGAAGACGATGTTGGAGACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATTGTGCAAGAGTATTATGCGTACCTATCGAATGCTCTAACTTGATCTTTCCCAAGCTTGATTTGGACGAGTCTCAGAGCATCACTGTCACCGACCTTAAAAGCCGAGAATGGGGGTACACATATACCTATGCAAATCTAAGTAGATTACATACTGGCTGGTTAAATTTTGTACGAGAGAAGAAACTCGTCGCCAACGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAACACCAAGTTCACTACAGATGAAGCGGATGAAGGAGGCGAGAATTTAACTGATGAGATTAAGGTTTTGGATGCAGTGGAATTGGCGGAGAAGAACACAGCATTTGATGTTGTGTATTATCCGACAGCTATTGGTTGGCGTGATTTTGTGGTGGATGCTAAGACTGTTGACGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGAGTGAAACTTCCTTTGAAGAAATATGAATCTTCAAGTTCAAAGATGACAATTTCTCAGCTTAAGGGGACAATCTCTTTTGTCTTTAATGATTCTTCTAATGTCCCTAATTGGCGCAGGTACATATGCTTTCTTAATTTGGTTAACTGGGATGGCCTTGATTTCCCGCAGAATCCAAACCTAGTCAATCCTTGGCAGGTTGAAGTTTACAACATACCTGCACCTTTGACTTCCTCCTCCACCGTCAACTCCGCCTCAAGAAAAACTCCTAGACTTGCTGAGAGTTCATCCCCCCAACAAACCTTGGCAGGGTCGAGTGGTACTTTGCCTGACACATAG

Protein sequence

>MsaT027602.1

MSHPLPPRVETKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRPSIPCIVSSVDLFVDSHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDVGDNLVSYVKTLTQSDCARVLCVPIECSNLIFPKLDLDESQSITVTDLKSREWGYTYTYANLSRLHTGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEADEGGENLTDEIKVLDAVELAEKNTAFDVVYYPTAIGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSSSKMTISQLKGTISFVFNDSSNVPNWRRYICFLNLVNWDGLDFPQNPNLVNPWQVEVYNIPAPLTSSSTVNSASRKTPRLAESSSPQQTLAGSSGTLPDT*