Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG027609 | AES97840.2 | 67.473 | 372 | 100 | 8 | 1 | 357 | 9 | 374 | 9.24e-159 | 469 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG027609 | sp|Q84WU6|ARFQ_ARATH | 32.495 | 517 | 257 | 19 | 1 | 447 | 16 | 510 | 1.30e-63 | 222 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG027609 | tr|G7K918|G7K918_MEDTR | 67.473 | 372 | 100 | 8 | 1 | 357 | 9 | 374 | 4.41e-159 | 469 |
Gene ID | Type | Classification |
---|---|---|
MsaG027609 | TF | B3-ARF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000029 | MsaG027609 | 0.803899 | 4.712656e-49 | 6.964509e-47 |
MsaG000207 | MsaG027609 | 0.868030 | 1.783884e-65 | 1.905282e-62 |
MsaG000179 | MsaG027609 | 0.813246 | 4.858510e-51 | 8.987060e-49 |
MsaG000352 | MsaG027609 | 0.806065 | 1.669167e-49 | 2.594350e-47 |
MsaG000671 | MsaG027609 | 0.820405 | 1.223605e-52 | 2.720177e-50 |
MsaG000733 | MsaG027609 | 0.825798 | 6.843580e-54 | 1.759906e-51 |
MsaG000830 | MsaG027609 | 0.828885 | 1.256199e-54 | 3.521614e-52 |
MsaG001295 | MsaG027609 | 0.835148 | 3.619299e-56 | 1.217699e-53 |
MsaG001739 | MsaG027609 | 0.836566 | 1.588146e-56 | 5.575655e-54 |
MsaG002560 | MsaG027609 | 0.806865 | 1.134066e-49 | 1.796227e-47 |
MsaG002563 | MsaG027609 | 0.855239 | 1.394491e-61 | 9.086853e-59 |
MsaG003399 | MsaG027609 | 0.805312 | 2.398799e-49 | 3.663099e-47 |
MsaG003381 | MsaG027609 | 0.801349 | 1.573425e-48 | 2.193163e-46 |
MsaG003565 | MsaG027609 | 0.810313 | 2.098039e-50 | 3.610320e-48 |
MsaG003828 | MsaG027609 | 0.832555 | 1.600098e-55 | 4.985776e-53 |
MsaG003974 | MsaG027609 | 0.810654 | 1.772163e-50 | 3.074973e-48 |
MsaG004030 | MsaG027609 | 0.859774 | 6.433456e-63 | 4.959168e-60 |
MsaG004340 | MsaG027609 | 0.823729 | 2.093457e-53 | 5.087023e-51 |
MsaG004422 | MsaG027609 | 0.832945 | 1.281941e-55 | 4.040142e-53 |
MsaG004528 | MsaG027609 | 0.817478 | 5.620305e-52 | 1.157446e-49 |
MsaG004759 | MsaG027609 | 0.808237 | 5.818481e-50 | 9.522967e-48 |
MsaG004912 | MsaG027609 | 0.839231 | 3.305578e-57 | 1.259637e-54 |
MsaG005387 | MsaG027609 | 0.879033 | 3.644107e-69 | 6.290475e-66 |
MsaG005447 | MsaG027609 | 0.867879 | 1.993371e-65 | 2.115809e-62 |
MsaG005451 | MsaG027609 | 0.851297 | 1.858903e-60 | 1.053573e-57 |
MsaG005918 | MsaG027609 | 0.836633 | 1.527734e-56 | 5.374280e-54 |
MsaG006338 | MsaG027609 | 0.856401 | 6.402355e-62 | 4.352738e-59 |
MsaG006431 | MsaG027609 | 0.810443 | 1.967094e-50 | 3.395861e-48 |
MsaG006658 | MsaG027609 | 0.817276 | 6.237128e-52 | 1.277837e-49 |
MsaG006752 | MsaG027609 | 0.839269 | 3.231124e-57 | 1.232756e-54 |
MsaG006891 | MsaG027609 | 0.838535 | 4.994968e-57 | 1.862657e-54 |
MsaG006934 | MsaG027609 | 0.814831 | 2.179861e-51 | 4.195971e-49 |
MsaG007334 | MsaG027609 | 0.802975 | 7.309333e-49 | 1.057368e-46 |
MsaG007554 | MsaG027609 | 0.849306 | 6.683273e-60 | 3.537499e-57 |
MsaG007557 | MsaG027609 | 0.824306 | 1.535309e-53 | 3.789648e-51 |
MsaG007713 | MsaG027609 | 0.815899 | 1.265402e-51 | 2.502445e-49 |
MsaG007927 | MsaG027609 | 0.823167 | 2.829137e-53 | 6.770412e-51 |
MsaG008171 | MsaG027609 | 0.821165 | 8.197981e-53 | 1.859543e-50 |
MsaG008246 | MsaG027609 | 0.819484 | 1.982941e-52 | 4.302128e-50 |
MsaG008480 | MsaG027609 | 0.850388 | 3.340435e-60 | 1.834558e-57 |
MsaG008631 | MsaG027609 | 0.820737 | 1.027395e-52 | 2.304010e-50 |
MsaG008915 | MsaG027609 | 0.819810 | 1.672215e-52 | 3.659141e-50 |
MsaG009073 | MsaG027609 | 0.818056 | 4.169393e-52 | 8.714911e-50 |
MsaG009206 | MsaG027609 | 0.814677 | 2.357836e-51 | 4.520812e-49 |
MsaG009456 | MsaG027609 | 0.828855 | 1.276840e-54 | 3.576381e-52 |
MsaG010862 | MsaG027609 | 0.823229 | 2.735972e-53 | 6.558688e-51 |
MsaG010945 | MsaG027609 | 0.806086 | 1.652796e-49 | 2.570130e-47 |
MsaG011044 | MsaG027609 | 0.854529 | 2.236273e-61 | 1.420655e-58 |
MsaG011117 | MsaG027609 | 0.812580 | 6.786484e-51 | 1.234706e-48 |
MsaG011242 | MsaG027609 | 0.811958 | 9.263858e-51 | 1.659663e-48 |
MsaG011256 | MsaG027609 | 0.849923 | 4.502633e-60 | 2.433877e-57 |
MsaG011426 | MsaG027609 | 0.844797 | 1.133687e-58 | 5.160310e-56 |
MsaG011534 | MsaG027609 | 0.811286 | 1.294786e-50 | 2.281714e-48 |
MsaG011590 | MsaG027609 | 0.807322 | 9.084217e-50 | 1.454488e-47 |
MsaG011586 | MsaG027609 | 0.845263 | 8.495226e-59 | 3.926235e-56 |
MsaG011613 | MsaG027609 | 0.822833 | 3.380784e-53 | 8.018219e-51 |
MsaG011808 | MsaG027609 | 0.843387 | 2.697976e-58 | 1.172958e-55 |
MsaG011813 | MsaG027609 | 0.826762 | 4.045586e-54 | 1.068617e-51 |
MsaG012131 | MsaG027609 | 0.812439 | 7.286060e-51 | 1.320922e-48 |
MsaG012287 | MsaG027609 | 0.803590 | 5.460787e-49 | 8.012478e-47 |
MsaG012377 | MsaG027609 | 0.801621 | 1.384679e-48 | 1.942028e-46 |
MsaG012444 | MsaG027609 | 0.817809 | 4.737011e-52 | 9.838828e-50 |
MsaG041863 | MsaG027609 | 0.824377 | 1.477472e-53 | 3.654024e-51 |
MsaG042094 | MsaG027609 | 0.804207 | 4.070560e-49 | 6.058831e-47 |
MsaG043809 | MsaG027609 | 0.807054 | 1.034755e-49 | 1.646252e-47 |
MsaG043810 | MsaG027609 | 0.806579 | 1.302548e-49 | 2.049332e-47 |
MsaG044065 | MsaG027609 | 0.825775 | 6.929692e-54 | 1.780907e-51 |
MsaG044872 | MsaG027609 | 0.807039 | 1.042476e-49 | 1.657949e-47 |
MsaG045342 | MsaG027609 | 0.838085 | 6.514421e-57 | 2.395467e-54 |
MsaG045760 | MsaG027609 | 0.820944 | 9.212222e-53 | 2.077389e-50 |
MsaG045786 | MsaG027609 | 0.839626 | 2.613468e-57 | 1.008275e-54 |
MsaG045989 | MsaG027609 | 0.843415 | 2.651984e-58 | 1.153989e-55 |
MsaG046031 | MsaG027609 | 0.850648 | 2.826827e-60 | 1.566669e-57 |
MsaG046330 | MsaG027609 | 0.843675 | 2.260785e-58 | 9.920631e-56 |
MsaG046537 | MsaG027609 | 0.837515 | 9.109919e-57 | 3.291993e-54 |
MsaG046426 | MsaG027609 | 0.811490 | 1.170324e-50 | 2.072645e-48 |
MsaG046502 | MsaG027609 | 0.842575 | 4.425238e-58 | 1.874557e-55 |
MsaG046735 | MsaG027609 | 0.826073 | 5.893274e-54 | 1.527178e-51 |
MsaG046839 | MsaG027609 | 0.819713 | 1.758738e-52 | 3.838667e-50 |
MsaG046910 | MsaG027609 | 0.829129 | 1.097052e-54 | 3.096562e-52 |
MsaG047018 | MsaG027609 | 0.828375 | 1.665933e-54 | 4.604188e-52 |
MsaG047022 | MsaG027609 | 0.808725 | 4.583270e-50 | 7.590200e-48 |
MsaG047066 | MsaG027609 | 0.819018 | 2.529282e-52 | 5.420694e-50 |
MsaG001526 | MsaG027609 | 0.838909 | 4.001772e-57 | 1.509810e-54 |
MsaG001077 | MsaG027609 | 0.801564 | 1.422594e-48 | 1.992562e-46 |
MsaG003533 | MsaG027609 | 0.814070 | 3.206343e-51 | 6.054770e-49 |
MsaG007339 | MsaG027609 | 0.834618 | 4.914731e-56 | 1.627586e-53 |
MsaG013186 | MsaG027609 | 0.826315 | 5.166391e-54 | 1.347771e-51 |
MsaG019050 | MsaG027609 | 0.831564 | 2.805371e-55 | 8.492928e-53 |
MsaG028203 | MsaG027609 | 0.805095 | 2.662230e-49 | 4.044955e-47 |
MsaG027609 | MsaG026846 | 0.821131 | 8.348675e-53 | 1.891958e-50 |
MsaG027609 | MsaG027453 | 0.831005 | 3.842473e-55 | 1.144521e-52 |
MsaG027609 | MsaG026809 | 0.809741 | 2.781980e-50 | 4.721284e-48 |
MsaG027609 | MsaG033429 | 0.816260 | 1.051502e-51 | 2.098693e-49 |
MsaG027609 | MsaG030637 | 0.827833 | 2.246446e-54 | 6.114736e-52 |
MsaG027609 | MsaG031967 | 0.840416 | 1.629266e-57 | 6.443940e-55 |
MsaG027609 | MsaG031808 | 0.813044 | 5.377502e-51 | 9.897276e-49 |
MsaG027609 | MsaG032258 | 0.818750 | 2.907876e-52 | 6.188414e-50 |
MsaG027609 | MsaG032953 | 0.865940 | 8.216429e-65 | 8.059910e-62 |
MsaG027609 | MsaG030727 | 0.811454 | 1.191350e-50 | 2.108054e-48 |
MsaG027609 | MsaG035307 | 0.830912 | 4.049341e-55 | 1.202898e-52 |
MsaG027609 | MsaG037087 | 0.819331 | 2.148276e-52 | 4.642338e-50 |
MsaG027609 | MsaG037090 | 0.835147 | 3.621973e-56 | 1.218555e-53 |
MsaG027609 | MsaG034934 | 0.827343 | 2.942351e-54 | 7.899074e-52 |
MsaG027609 | MsaG045742 | 0.834724 | 4.623409e-56 | 1.536010e-53 |
MsaG027609 | MsaG043095 | 0.845092 | 9.445616e-59 | 4.341401e-56 |
MsaG027609 | MsaG046965 | 0.811373 | 1.240033e-50 | 2.189844e-48 |
MsaG013878 | MsaG027609 | 0.862351 | 1.067367e-63 | 9.081076e-61 |
MsaG014516 | MsaG027609 | 0.833251 | 1.076299e-55 | 3.422908e-53 |
MsaG014957 | MsaG027609 | 0.825710 | 7.179532e-54 | 1.841819e-51 |
MsaG015359 | MsaG027609 | 0.833475 | 9.472535e-56 | 3.032315e-53 |
MsaG016174 | MsaG027609 | 0.857784 | 2.514587e-62 | 1.798767e-59 |
MsaG016210 | MsaG027609 | 0.824274 | 1.561324e-53 | 3.850444e-51 |
MsaG016307 | MsaG027609 | 0.829300 | 9.974637e-55 | 2.829260e-52 |
MsaG016345 | MsaG027609 | 0.846504 | 3.924347e-59 | 1.889949e-56 |
MsaG016521 | MsaG027609 | 0.826444 | 4.815043e-54 | 1.260721e-51 |
MsaG017322 | MsaG027609 | 0.833958 | 7.184167e-56 | 2.332507e-53 |
MsaG017532 | MsaG027609 | 0.812126 | 8.520943e-51 | 1.532781e-48 |
MsaG017588 | MsaG027609 | 0.850856 | 2.471623e-60 | 1.379676e-57 |
MsaG017666 | MsaG027609 | 0.844435 | 1.417013e-58 | 6.373236e-56 |
MsaG017936 | MsaG027609 | 0.820790 | 9.991537e-53 | 2.243886e-50 |
MsaG017974 | MsaG027609 | 0.818396 | 3.495724e-52 | 7.371182e-50 |
MsaG018007 | MsaG027609 | 0.828944 | 1.215431e-54 | 3.412852e-52 |
MsaG018015 | MsaG027609 | 0.829514 | 8.855563e-55 | 2.527431e-52 |
MsaG018254 | MsaG027609 | 0.852741 | 7.258159e-61 | 4.327253e-58 |
MsaG018500 | MsaG027609 | 0.829905 | 7.117540e-55 | 2.054310e-52 |
MsaG018524 | MsaG027609 | 0.808780 | 4.461418e-50 | 7.398066e-48 |
MsaG018525 | MsaG027609 | 0.821497 | 6.877691e-53 | 1.573793e-50 |
MsaG018626 | MsaG027609 | 0.842001 | 6.273234e-58 | 2.608873e-55 |
MsaG018653 | MsaG027609 | 0.911087 | 2.197785e-82 | 2.230111e-78 |
MsaG018689 | MsaG027609 | 0.810392 | 2.017454e-50 | 3.478425e-48 |
MsaG019578 | MsaG027609 | 0.830644 | 4.707815e-55 | 1.387692e-52 |
MsaG019804 | MsaG027609 | 0.838433 | 5.306133e-57 | 1.972273e-54 |
MsaG020205 | MsaG027609 | 0.892873 | 2.364077e-74 | 8.116331e-71 |
MsaG020278 | MsaG027609 | 0.815153 | 1.850715e-51 | 3.591369e-49 |
MsaG020424 | MsaG027609 | 0.805810 | 1.887839e-49 | 2.916571e-47 |
MsaG020497 | MsaG027609 | 0.839469 | 2.869883e-57 | 1.101846e-54 |
MsaG020532 | MsaG027609 | 0.810709 | 1.724580e-50 | 2.996386e-48 |
MsaG020565 | MsaG027609 | 0.910586 | 3.847837e-82 | 3.779993e-78 |
MsaG020889 | MsaG027609 | 0.804589 | 3.391836e-49 | 5.093264e-47 |
MsaG020933 | MsaG027609 | 0.803416 | 5.930652e-49 | 8.666988e-47 |
MsaG020952 | MsaG027609 | 0.842205 | 5.542106e-58 | 2.319646e-55 |
MsaG021106 | MsaG027609 | 0.800179 | 2.719759e-48 | 3.692028e-46 |
MsaG021338 | MsaG027609 | 0.812939 | 5.670205e-51 | 1.040846e-48 |
MsaG021301 | MsaG027609 | 0.852301 | 9.680012e-61 | 5.683104e-58 |
MsaG021868 | MsaG027609 | 0.816610 | 8.790252e-52 | 1.770138e-49 |
MsaG021969 | MsaG027609 | 0.806257 | 1.521769e-49 | 2.376097e-47 |
MsaG022915 | MsaG027609 | 0.826774 | 4.018355e-54 | 1.061766e-51 |
MsaG023405 | MsaG027609 | 0.848926 | 8.515246e-60 | 4.449070e-57 |
MsaG023503 | MsaG027609 | 0.824305 | 1.535752e-53 | 3.790667e-51 |
MsaG023630 | MsaG027609 | 0.820452 | 1.193573e-52 | 2.656781e-50 |
MsaG023698 | MsaG027609 | 0.815121 | 1.881041e-51 | 3.647210e-49 |
MsaG023830 | MsaG027609 | 0.823292 | 2.645841e-53 | 6.353534e-51 |
MsaG023963 | MsaG027609 | 0.811887 | 9.600640e-51 | 1.716974e-48 |
MsaG024263 | MsaG027609 | 0.802728 | 8.216514e-49 | 1.181854e-46 |
MsaG024283 | MsaG027609 | 0.823507 | 2.358243e-53 | 5.695917e-51 |
MsaG024484 | MsaG027609 | 0.854575 | 2.169089e-61 | 1.380222e-58 |
MsaG025990 | MsaG027609 | 0.801241 | 1.655441e-48 | 2.301776e-46 |
MsaG026584 | MsaG027609 | 0.809030 | 3.947361e-50 | 6.585031e-48 |
MsaG026763 | MsaG027609 | 0.862080 | 1.291375e-63 | 1.087127e-60 |
MsaG027087 | MsaG027609 | 0.806300 | 1.490190e-49 | 2.329160e-47 |
MsaG027149 | MsaG027609 | 0.888666 | 1.053800e-72 | 2.898708e-69 |
MsaG027193 | MsaG027609 | 0.828700 | 1.392063e-54 | 3.882113e-52 |
MsaG027252 | MsaG027609 | 0.864705 | 2.002253e-64 | 1.869548e-61 |
MsaG027423 | MsaG027609 | 0.822763 | 3.509938e-53 | 8.308884e-51 |
MsaG027861 | MsaG027609 | 0.821109 | 8.444958e-53 | 1.912633e-50 |
MsaG028149 | MsaG027609 | 0.882796 | 1.645116e-70 | 3.387624e-67 |
MsaG028230 | MsaG027609 | 0.808769 | 4.486619e-50 | 7.437784e-48 |
MsaG028669 | MsaG027609 | 0.845206 | 8.803341e-59 | 4.061011e-56 |
MsaG029512 | MsaG027609 | 0.804633 | 3.320093e-49 | 4.990684e-47 |
MsaG029838 | MsaG027609 | 0.870328 | 3.226589e-66 | 3.790856e-63 |
MsaG030602 | MsaG027609 | 0.832954 | 1.275427e-55 | 4.020610e-53 |
MsaG030864 | MsaG027609 | 0.863183 | 5.925762e-64 | 5.209045e-61 |
MsaG031878 | MsaG027609 | 0.856635 | 5.470076e-62 | 3.750494e-59 |
MsaG032443 | MsaG027609 | 0.871852 | 1.019552e-66 | 1.278457e-63 |
MsaG033403 | MsaG027609 | 0.808263 | 5.746326e-50 | 9.410676e-48 |
MsaG033645 | MsaG027609 | 0.826323 | 5.141244e-54 | 1.341529e-51 |
MsaG034065 | MsaG027609 | 0.806415 | 1.409689e-49 | 2.209370e-47 |
MsaG034179 | MsaG027609 | 0.808056 | 6.357166e-50 | 1.035927e-47 |
MsaG034170 | MsaG027609 | 0.811865 | 9.705250e-51 | 1.734740e-48 |
MsaG034330 | MsaG027609 | 0.808739 | 4.551661e-50 | 7.540511e-48 |
MsaG035254 | MsaG027609 | 0.800093 | 2.830438e-48 | 3.834917e-46 |
MsaG035534 | MsaG027609 | 0.800553 | 2.283848e-48 | 3.126789e-46 |
MsaG035675 | MsaG027609 | 0.831145 | 3.552882e-55 | 1.062496e-52 |
MsaG036126 | MsaG027609 | 0.823984 | 1.824989e-53 | 4.465354e-51 |
MsaG036915 | MsaG027609 | 0.833472 | 9.486382e-56 | 3.036505e-53 |
MsaG038751 | MsaG027609 | 0.850229 | 3.701518e-60 | 2.021698e-57 |
MsaG039410 | MsaG027609 | 0.840961 | 1.175177e-57 | 4.728177e-55 |
MsaG039929 | MsaG027609 | 0.829940 | 6.981741e-55 | 2.017150e-52 |
MsaG039840 | MsaG027609 | 0.837693 | 8.207017e-57 | 2.981657e-54 |
MsaG040355 | MsaG027609 | 0.818803 | 2.828395e-52 | 6.027608e-50 |
MsaG040358 | MsaG027609 | 0.812349 | 7.619612e-51 | 1.378309e-48 |
MsaG040578 | MsaG027609 | 0.803141 | 6.756155e-49 | 9.810967e-47 |
MsaG040676 | MsaG027609 | 0.860586 | 3.665590e-63 | 2.914735e-60 |
MsaG041790 | MsaG027609 | 0.800184 | 2.713288e-48 | 3.683693e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG027609 | MtrunA17_Chr5g0424801 | 67.560 | 373 | 100 | 8 | 1 | 358 | 9 | 375 | 1.31e-162 | 468 |
MsaG027609 | MtrunA17_Chr5g0425261 | 67.857 | 364 | 97 | 7 | 1 | 349 | 9 | 367 | 2.31e-162 | 468 |
MsaG027609 | MtrunA17_Chr5g0424931 | 48.423 | 444 | 160 | 11 | 1 | 388 | 16 | 446 | 3.10e-126 | 380 |
MsaG027609 | MtrunA17_Chr5g0424741 | 52.696 | 408 | 129 | 8 | 1 | 345 | 9 | 415 | 1.26e-124 | 376 |
MsaG027609 | MtrunA17_Chr1g0178011 | 52.778 | 360 | 145 | 9 | 1 | 341 | 9 | 362 | 2.81e-115 | 350 |
MsaG027609 | MtrunA17_Chr5g0417281 | 50.602 | 332 | 140 | 9 | 1 | 316 | 8 | 331 | 2.46e-94 | 298 |
MsaG027609 | MtrunA17_Chr2g0289221 | 52.381 | 315 | 121 | 10 | 1 | 296 | 17 | 321 | 1.16e-93 | 291 |
MsaG027609 | MtrunA17_Chr2g0277461 | 45.225 | 356 | 169 | 10 | 4 | 341 | 13 | 360 | 1.81e-83 | 268 |
MsaG027609 | MtrunA17_Chr5g0436761 | 39.903 | 411 | 209 | 13 | 1 | 385 | 9 | 407 | 4.18e-83 | 267 |
MsaG027609 | MtrunA17_Chr5g0417211 | 48.734 | 316 | 134 | 9 | 1 | 297 | 9 | 315 | 5.11e-79 | 254 |
MsaG027609 | MtrunA17_Chr2g0277531 | 44.660 | 309 | 145 | 9 | 4 | 296 | 20 | 318 | 4.61e-74 | 239 |
MsaG027609 | MtrunA17_Chr3g0115271 | 33.586 | 527 | 246 | 18 | 1 | 459 | 16 | 506 | 6.10e-63 | 217 |
MsaG027609 | MtrunA17_Chr5g0425661 | 54.327 | 208 | 73 | 7 | 3 | 193 | 36 | 238 | 7.09e-63 | 206 |
MsaG027609 | MtrunA17_Chr1g0181211 | 33.038 | 451 | 215 | 13 | 1 | 373 | 24 | 465 | 2.22e-55 | 198 |
MsaG027609 | MtrunA17_Chr2g0326761 | 34.635 | 384 | 179 | 13 | 1 | 322 | 8 | 381 | 1.04e-52 | 191 |
MsaG027609 | MtrunA17_Chr1g0199681 | 33.252 | 412 | 190 | 15 | 1 | 347 | 91 | 482 | 2.87e-50 | 184 |
MsaG027609 | MtrunA17_Chr5g0424791 | 65.714 | 140 | 44 | 2 | 53 | 188 | 12 | 151 | 1.57e-49 | 168 |
MsaG027609 | MtrunA17_Chr4g0028971 | 34.545 | 385 | 174 | 12 | 1 | 317 | 9 | 383 | 2.00e-48 | 179 |
MsaG027609 | MtrunA17_Chr7g0264171 | 28.913 | 460 | 225 | 14 | 1 | 373 | 28 | 472 | 3.37e-46 | 171 |
MsaG027609 | MtrunA17_Chr2g0276781 | 32.029 | 409 | 208 | 15 | 4 | 377 | 23 | 396 | 2.74e-42 | 161 |
MsaG027609 | MtrunA17_Chr2g0285461 | 33.884 | 363 | 182 | 17 | 1 | 320 | 20 | 367 | 1.58e-38 | 151 |
MsaG027609 | MtrunA17_Chr7g0264161 | 32.131 | 305 | 165 | 9 | 14 | 291 | 2 | 291 | 2.49e-38 | 143 |
MsaG027609 | MtrunA17_Chr8g0385791 | 31.548 | 336 | 204 | 9 | 4 | 316 | 59 | 391 | 1.06e-37 | 149 |
MsaG027609 | MtrunA17_Chr8g0376771 | 32.687 | 361 | 188 | 15 | 1 | 320 | 20 | 366 | 1.63e-37 | 148 |
MsaG027609 | MtrunA17_Chr5g0433301 | 32.507 | 363 | 187 | 16 | 1 | 320 | 21 | 368 | 3.61e-36 | 144 |
MsaG027609 | MtrunA17_Chr1g0156321 | 31.092 | 357 | 207 | 11 | 1 | 324 | 40 | 390 | 5.38e-36 | 144 |
MsaG027609 | MtrunA17_Chr4g0009751 | 30.270 | 370 | 215 | 14 | 2 | 343 | 17 | 371 | 7.77e-36 | 142 |
MsaG027609 | MtrunA17_Chr2g0301251 | 32.174 | 345 | 196 | 14 | 1 | 316 | 20 | 355 | 1.09e-35 | 143 |
MsaG027609 | MtrunA17_Chr2g0282961 | 30.337 | 356 | 202 | 13 | 4 | 325 | 53 | 396 | 1.25e-35 | 141 |
MsaG027609 | MtrunA17_Chr3g0109391 | 31.492 | 362 | 192 | 15 | 1 | 320 | 23 | 370 | 8.32e-35 | 140 |
MsaG027609 | MtrunA17_Chr8g0346711 | 31.322 | 348 | 214 | 12 | 4 | 331 | 29 | 371 | 3.03e-34 | 137 |
MsaG027609 | MtrunA17_Chr4g0046371 | 30.851 | 376 | 210 | 14 | 4 | 342 | 38 | 400 | 3.56e-34 | 137 |
MsaG027609 | MtrunA17_Chr7g0239061 | 28.997 | 369 | 210 | 14 | 4 | 336 | 14 | 366 | 4.41e-34 | 137 |
MsaG027609 | MtrunA17_Chr2g0326281 | 31.053 | 380 | 207 | 13 | 4 | 335 | 56 | 428 | 1.62e-33 | 136 |
MsaG027609 | MtrunA17_Chr4g0070181 | 31.304 | 345 | 199 | 14 | 1 | 316 | 20 | 355 | 2.04e-33 | 136 |
MsaG027609 | MtrunA17_Chr5g0425651 | 52.991 | 117 | 51 | 2 | 211 | 324 | 1 | 116 | 4.66e-31 | 117 |
MsaG027609 | MtrunA17_Chr8g0389081 | 30.312 | 353 | 194 | 11 | 1 | 316 | 29 | 366 | 6.83e-29 | 122 |
MsaG027609 | MtrunA17_Chr4g0029671 | 30.108 | 372 | 214 | 12 | 4 | 343 | 54 | 411 | 2.33e-28 | 120 |
MsaG027609 | MtrunA17_Chr8g0356211 | 26.201 | 229 | 137 | 9 | 110 | 316 | 2 | 220 | 2.59e-12 | 68.2 |
MsaG027609 | MtrunA17_Chr5g0419861 | 34.711 | 121 | 69 | 4 | 42 | 153 | 12 | 131 | 6.13e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG027609 | AT1G77850.2 | 32.495 | 517 | 257 | 19 | 1 | 447 | 16 | 510 | 1.00e-64 | 222 |
MsaG027609 | AT1G77850.1 | 32.495 | 517 | 257 | 19 | 1 | 447 | 16 | 510 | 1.32e-64 | 222 |
MsaG027609 | AT4G30080.1 | 32.397 | 463 | 221 | 15 | 1 | 386 | 16 | 463 | 7.02e-53 | 191 |
MsaG027609 | AT3G61830.1 | 33.938 | 386 | 206 | 16 | 3 | 359 | 24 | 389 | 4.07e-45 | 169 |
MsaG027609 | AT2G28350.2 | 32.911 | 395 | 168 | 15 | 1 | 317 | 7 | 382 | 1.28e-44 | 168 |
MsaG027609 | AT2G28350.1 | 32.911 | 395 | 168 | 15 | 1 | 317 | 7 | 382 | 1.67e-44 | 168 |
MsaG027609 | AT2G46530.1 | 32.973 | 370 | 200 | 15 | 3 | 343 | 20 | 370 | 1.28e-42 | 162 |
MsaG027609 | AT2G46530.3 | 32.973 | 370 | 200 | 15 | 3 | 343 | 41 | 391 | 1.64e-42 | 162 |
MsaG027609 | AT5G37020.2 | 31.967 | 366 | 185 | 17 | 1 | 320 | 19 | 366 | 2.69e-39 | 154 |
MsaG027609 | AT5G37020.1 | 31.967 | 366 | 185 | 17 | 1 | 320 | 19 | 366 | 4.51e-39 | 153 |
MsaG027609 | AT1G59750.1 | 32.938 | 337 | 197 | 11 | 4 | 316 | 22 | 353 | 3.21e-38 | 150 |
MsaG027609 | AT1G59750.3 | 32.938 | 337 | 197 | 11 | 4 | 316 | 22 | 353 | 3.21e-38 | 150 |
MsaG027609 | AT1G59750.4 | 32.938 | 337 | 197 | 11 | 4 | 316 | 22 | 353 | 3.21e-38 | 150 |
MsaG027609 | AT1G59750.2 | 32.938 | 337 | 197 | 11 | 4 | 316 | 22 | 353 | 3.35e-38 | 149 |
MsaG027609 | AT1G30330.1 | 32.222 | 360 | 192 | 14 | 1 | 320 | 20 | 367 | 7.15e-38 | 150 |
MsaG027609 | AT1G30330.3 | 32.222 | 360 | 192 | 14 | 1 | 320 | 22 | 369 | 7.43e-38 | 150 |
MsaG027609 | AT1G30330.2 | 32.222 | 360 | 192 | 14 | 1 | 320 | 22 | 369 | 7.43e-38 | 150 |
MsaG027609 | AT2G33860.1 | 32.527 | 372 | 197 | 16 | 4 | 338 | 54 | 408 | 1.72e-36 | 144 |
MsaG027609 | AT1G19850.2 | 31.768 | 362 | 197 | 13 | 1 | 323 | 40 | 390 | 1.86e-36 | 145 |
MsaG027609 | AT1G19850.1 | 31.768 | 362 | 197 | 13 | 1 | 323 | 51 | 401 | 1.99e-36 | 145 |
MsaG027609 | AT5G62000.2 | 30.612 | 343 | 198 | 10 | 4 | 316 | 61 | 393 | 2.20e-35 | 142 |
MsaG027609 | AT5G62000.5 | 30.612 | 343 | 198 | 10 | 4 | 316 | 61 | 393 | 2.20e-35 | 142 |
MsaG027609 | AT5G62000.3 | 30.612 | 343 | 198 | 10 | 4 | 316 | 61 | 393 | 2.20e-35 | 142 |
MsaG027609 | AT5G62000.1 | 30.612 | 343 | 198 | 10 | 4 | 316 | 61 | 393 | 2.20e-35 | 142 |
MsaG027609 | AT5G62000.4 | 30.612 | 343 | 198 | 10 | 4 | 316 | 61 | 393 | 2.22e-35 | 142 |
MsaG027609 | AT1G34390.1 | 31.487 | 343 | 192 | 12 | 1 | 316 | 24 | 350 | 8.78e-34 | 136 |
MsaG027609 | AT1G35520.1 | 31.594 | 345 | 191 | 13 | 1 | 316 | 24 | 352 | 1.60e-33 | 135 |
MsaG027609 | AT4G23980.1 | 28.877 | 374 | 213 | 13 | 4 | 345 | 12 | 364 | 2.89e-33 | 135 |
MsaG027609 | AT4G23980.2 | 28.877 | 374 | 213 | 13 | 4 | 345 | 12 | 364 | 3.08e-33 | 135 |
MsaG027609 | AT1G35540.1 | 30.287 | 383 | 223 | 14 | 1 | 355 | 24 | 390 | 5.41e-33 | 134 |
MsaG027609 | AT5G20730.3 | 31.304 | 345 | 200 | 13 | 1 | 316 | 21 | 357 | 5.90e-33 | 135 |
MsaG027609 | AT1G35240.1 | 31.884 | 345 | 190 | 14 | 1 | 316 | 24 | 352 | 6.00e-33 | 134 |
MsaG027609 | AT5G20730.1 | 31.304 | 345 | 200 | 13 | 1 | 316 | 21 | 357 | 6.87e-33 | 135 |
MsaG027609 | AT1G34410.1 | 30.725 | 345 | 194 | 13 | 1 | 316 | 24 | 352 | 7.77e-33 | 133 |
MsaG027609 | AT1G19220.1 | 31.322 | 348 | 195 | 13 | 1 | 316 | 20 | 355 | 9.60e-33 | 134 |
MsaG027609 | AT5G20730.2 | 31.395 | 344 | 200 | 13 | 1 | 316 | 21 | 356 | 1.13e-32 | 134 |
MsaG027609 | AT1G34310.1 | 31.871 | 342 | 188 | 13 | 4 | 316 | 27 | 352 | 2.98e-32 | 131 |
MsaG027609 | AT5G60450.2 | 30.601 | 366 | 214 | 12 | 3 | 335 | 40 | 398 | 5.19e-32 | 132 |
MsaG027609 | AT5G60450.1 | 30.601 | 366 | 214 | 12 | 3 | 335 | 64 | 422 | 6.09e-32 | 131 |
MsaG027609 | AT3G61830.2 | 32.948 | 346 | 187 | 15 | 39 | 359 | 13 | 338 | 1.90e-31 | 129 |
MsaG027609 | AT1G34170.1 | 28.606 | 409 | 233 | 17 | 1 | 369 | 22 | 411 | 9.37e-29 | 120 |
MsaG027609 | AT1G34170.2 | 27.820 | 399 | 223 | 15 | 1 | 369 | 22 | 385 | 2.10e-23 | 103 |
MsaG027609 | AT1G34170.3 | 27.820 | 399 | 223 | 15 | 1 | 369 | 22 | 385 | 2.25e-23 | 104 |
MsaG027609 | AT2G46530.2 | 32.319 | 263 | 141 | 12 | 103 | 343 | 36 | 283 | 2.04e-22 | 101 |
MsaG027609 | AT1G43950.1 | 33.333 | 207 | 114 | 7 | 1 | 191 | 24 | 222 | 4.63e-22 | 95.5 |
MsaG027609 | AT5G37020.3 | 30.714 | 280 | 144 | 14 | 77 | 320 | 6 | 271 | 2.82e-21 | 98.6 |
MsaG027609 | AT2G33860.2 | 31.679 | 262 | 140 | 12 | 104 | 338 | 2 | 251 | 4.88e-21 | 96.7 |
Find 165 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCTTTATCATAGGTTAAA+TGG | 0.116737 | 5:-48767099 | MsaT027609.1:intron |
TGTTTCCATCGTCGTCTTCT+TGG | 0.207983 | 5:+48768072 | None:intergenic |
CGCAGAGTCGACTGATAATT+TGG | 0.232255 | 5:-48766696 | MsaT027609.1:CDS |
ATAGTTAAATTTGAAGATTC+AGG | 0.238302 | 5:+48767555 | None:intergenic |
ACCTTAAGCATGTGCCAATT+AGG | 0.244625 | 5:+48767483 | None:intergenic |
GGTGGTTTCTGCGGGGTATT+AGG | 0.250113 | 5:+48767070 | None:intergenic |
TAAACTTTAGAGTGAATCTT+TGG | 0.260426 | 5:+48768299 | None:intergenic |
ATTCTTCTAATGTCCCTAAT+TGG | 0.268826 | 5:-48767497 | MsaT027609.1:CDS |
TCTTGAGACTTCTGCAACTC+TGG | 0.293011 | 5:+48767963 | None:intergenic |
ATGGTGATTGTGGCAGCATT+AGG | 0.295879 | 5:+48768236 | None:intergenic |
TCACTTGGTGCTTGGCTCAT+TGG | 0.308376 | 5:+48766271 | None:intergenic |
CTTGGTCTGTTACGGGAGTT+AGG | 0.314595 | 5:+48768120 | None:intergenic |
CTACTTCCCACAAGGTCATT+TGG | 0.318755 | 5:-48768276 | MsaT027609.1:CDS |
CTCGACTCTGCGCCCAAGTC+AGG | 0.332469 | 5:+48766638 | None:intergenic |
ATGAAGATTGGTTGGAAATC+TGG | 0.337904 | 5:-48767606 | MsaT027609.1:CDS |
CAGTTCTAAAGGTGCGGACT+TGG | 0.342634 | 5:-48766375 | MsaT027609.1:CDS |
CAGTTCTAAAGGTGCGGACT+TGG | 0.342634 | 5:-48766582 | MsaT027609.1:CDS |
CTCTTTATCATAGGTTAAAT+GGG | 0.347475 | 5:-48767098 | MsaT027609.1:intron |
TCTTCAAATTTAACTATAAG+AGG | 0.347983 | 5:-48767549 | MsaT027609.1:CDS |
TGACCAGGGGTGGTTTCTGC+GGG | 0.350158 | 5:+48767062 | None:intergenic |
CCAAGCTTTAGCCTTGTATC+AGG | 0.353230 | 5:+48766743 | None:intergenic |
TGGTGATTGTGGCAGCATTA+GGG | 0.354813 | 5:+48768237 | None:intergenic |
AGCGCATTTCTGCCATAGTT+TGG | 0.354882 | 5:+48768340 | None:intergenic |
TTCTCCCCTCTTTCAGCTGC+AGG | 0.356161 | 5:+48767759 | None:intergenic |
AGTGATACTTTGGCTGATAC+AGG | 0.356278 | 5:-48766410 | MsaT027609.1:CDS |
GATGAAAACAACGGAATCTT+CGG | 0.357948 | 5:+48767833 | None:intergenic |
AGTGATACTTTGGCGGATAC+AGG | 0.358719 | 5:-48766617 | MsaT027609.1:CDS |
GAGGGCAAAGCTTCGTTTGA+TGG | 0.363032 | 5:-48767580 | MsaT027609.1:CDS |
GTCTCTGTCACTGACCTTCC+AGG | 0.363192 | 5:-48767939 | MsaT027609.1:CDS |
AGTGGTACTTTGCTTGATAC+AGG | 0.364586 | 5:-48766824 | MsaT027609.1:CDS |
CCACAGGAGGAGGAGGTTCT+TGG | 0.364923 | 5:+48768102 | None:intergenic |
GCCACAATCACCATTCTTGA+TGG | 0.366631 | 5:-48768227 | MsaT027609.1:CDS |
ATTAACTGAGAGTGCGGTCT+TGG | 0.368633 | 5:-48767736 | MsaT027609.1:CDS |
AGGAGGTTCTTGGTCTGTTA+CGG | 0.370719 | 5:+48768112 | None:intergenic |
CAGTTCTAAAGGTGCGGACT+TGG | 0.371782 | 5:-48766444 | MsaT027609.1:CDS |
GAAGAACTCTGAGATAGTTT+AGG | 0.377530 | 5:+48766971 | None:intergenic |
CCTTAAGCATGTGCCAATTA+GGG | 0.381506 | 5:+48767484 | None:intergenic |
AGATTTCCAACCAATCTTCA+TGG | 0.383662 | 5:+48767608 | None:intergenic |
ATGAAAACAACGGAATCTTC+GGG | 0.384466 | 5:+48767834 | None:intergenic |
CAGTTCTAAAGGTGCATACT+TGG | 0.394032 | 5:-48766513 | MsaT027609.1:CDS |
ACACAAACTGATACTAAATC+TGG | 0.395790 | 5:-48768023 | MsaT027609.1:CDS |
GGAGGTTCTTGGTCTGTTAC+GGG | 0.397553 | 5:+48768113 | None:intergenic |
CCCTAATTGGCACATGCTTA+AGG | 0.403221 | 5:-48767484 | MsaT027609.1:intron |
CAGTTCTAAAGGCGCTGACT+TGG | 0.411550 | 5:-48766720 | MsaT027609.1:CDS |
GGTCTTGGGTGCAGTGGATT+TGG | 0.411620 | 5:-48767721 | MsaT027609.1:CDS |
TTTATCCCACAGATGGGAAT+TGG | 0.411809 | 5:-48767668 | MsaT027609.1:CDS |
AACCACCCCTGGTCAATCCT+TGG | 0.423879 | 5:-48767054 | MsaT027609.1:CDS |
CTCCTATGGACTCCAAACTA+TGG | 0.424679 | 5:-48768352 | None:intergenic |
GTGTGGAGTTGTTGCCTCAT+AGG | 0.439750 | 5:-48766295 | MsaT027609.1:CDS |
CACAGATTCGAGTGATACTT+TGG | 0.444058 | 5:-48766420 | MsaT027609.1:CDS |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.450303 | 5:-48766455 | MsaT027609.1:CDS |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.450303 | 5:-48766524 | MsaT027609.1:CDS |
TACGGGAGTTAGGAGCAGTT+TGG | 0.451525 | 5:+48768130 | None:intergenic |
GGTAATGGTGTCAGTGTACT+TGG | 0.452357 | 5:+48766920 | None:intergenic |
ATCTTTGGAATCTTGACGTC+GGG | 0.453371 | 5:+48768314 | None:intergenic |
CGCAGAGTCGAGTGATACTT+TGG | 0.455775 | 5:-48766351 | MsaT027609.1:CDS |
CGCAGAGTCGAGTGATACTT+TGG | 0.455775 | 5:-48766489 | MsaT027609.1:CDS |
CGCAGAGTCGAGTGATACTT+TGG | 0.455775 | 5:-48766558 | MsaT027609.1:CDS |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.457123 | 5:-48766593 | MsaT027609.1:CDS |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.461797 | 5:-48766317 | MsaT027609.1:CDS |
ATAAACAGTGGAGGCGGTAA+TGG | 0.462686 | 5:+48766905 | None:intergenic |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.463200 | 5:-48766731 | MsaT027609.1:CDS |
CAGTTCTAAAGGCCCTGACT+TGG | 0.463921 | 5:-48766651 | MsaT027609.1:CDS |
CATCTGGCATGCAAGGAGTC+AGG | 0.465776 | 5:-48766877 | MsaT027609.1:CDS |
CGCAGAGTCGAGTGATACTT+TGG | 0.467857 | 5:-48766627 | MsaT027609.1:CDS |
CTAAAGCTTGGCAGTTCTAA+AGG | 0.468643 | 5:-48766662 | MsaT027609.1:CDS |
TTAACTGAGAGTGCGGTCTT+GGG | 0.478339 | 5:-48767735 | MsaT027609.1:CDS |
ACCACCCCTGGTCAATCCTT+GGG | 0.479960 | 5:-48767053 | MsaT027609.1:CDS |
ATAAAGCTTGGCAGTTCTAA+AGG | 0.485741 | 5:-48766386 | MsaT027609.1:CDS |
AGTTCTAAAGGCGCTGACTT+GGG | 0.494023 | 5:-48766719 | MsaT027609.1:CDS |
GTATAGGTGTAGACTTTGCC+TGG | 0.494583 | 5:+48767921 | None:intergenic |
GTAGATGATGCCATGAAGAT+TGG | 0.497274 | 5:-48767618 | MsaT027609.1:CDS |
CATGGCATCATCTACAACCT+TGG | 0.499201 | 5:+48767626 | None:intergenic |
AGTTCTAAAGGTGCGGACTT+GGG | 0.500873 | 5:-48766374 | MsaT027609.1:CDS |
AGTTCTAAAGGTGCGGACTT+GGG | 0.500873 | 5:-48766581 | MsaT027609.1:CDS |
TCGACTCTGCGCCCAAGTCA+GGG | 0.505174 | 5:+48766639 | None:intergenic |
AGTTCTAAAGGCCCTGACTT+GGG | 0.505688 | 5:-48766650 | MsaT027609.1:CDS |
AAGATACCTCACTTGGTGCT+TGG | 0.507669 | 5:+48766263 | None:intergenic |
CTTGATACAGGGCTAAAGCT+TGG | 0.508063 | 5:-48766812 | MsaT027609.1:CDS |
AACTTCCCTGCAGCTGAAAG+AGG | 0.509078 | 5:-48767765 | MsaT027609.1:CDS |
TCTTCTTGGCCGTGAACCAC+AGG | 0.514079 | 5:+48768086 | None:intergenic |
CCTCCTCCTCCTGTGGTTCA+CGG | 0.519022 | 5:-48768095 | MsaT027609.1:CDS |
GAAGGTGCTGACTTGTTCGC+AGG | 0.520378 | 5:-48766851 | MsaT027609.1:CDS |
GGAGATGTTGACAGTGGAGG+AGG | 0.528074 | 5:+48767006 | None:intergenic |
GCTGATACAGTGCTAAAGCT+TGG | 0.530738 | 5:-48766329 | MsaT027609.1:CDS |
TTGACCAGGGGTGGTTTCTG+CGG | 0.531772 | 5:+48767061 | None:intergenic |
GCGGATACAGGGCTAAAGCT+TGG | 0.532091 | 5:-48766605 | MsaT027609.1:CDS |
GCTGATACAGGGATAAAGCT+TGG | 0.532500 | 5:-48766398 | MsaT027609.1:CDS |
CAACCTCCCAAGGATTGACC+AGG | 0.532831 | 5:+48767047 | None:intergenic |
AGGTGTAGACTTTGCCTGGA+AGG | 0.536557 | 5:+48767925 | None:intergenic |
GCTGATACAGAGCTAAAGCT+TGG | 0.537434 | 5:-48766674 | MsaT027609.1:CDS |
TGGCCGTGAACCACAGGAGG+AGG | 0.540091 | 5:+48768092 | None:intergenic |
ACTTCCCTGCAGCTGAAAGA+GGG | 0.541157 | 5:-48767764 | MsaT027609.1:CDS |
CCATGCATCGTCTCTACTGT+TGG | 0.543464 | 5:-48768188 | MsaT027609.1:CDS |
AAATATATGTCGGAATTCGC+AGG | 0.543716 | 5:-48767794 | MsaT027609.1:CDS |
CCTGATACAAGGCTAAAGCT+TGG | 0.543990 | 5:-48766743 | MsaT027609.1:CDS |
GAGACGATGCATGGAATGGA+TGG | 0.546365 | 5:+48768197 | None:intergenic |
AGTTCTAAAGGTGCGGACTT+GGG | 0.546645 | 5:-48766443 | MsaT027609.1:CDS |
TTGGTTGGAAATCTGGAATG+AGG | 0.547760 | 5:-48767599 | MsaT027609.1:CDS |
CTTGGCTCATTGGACCTATG+AGG | 0.550878 | 5:+48766281 | None:intergenic |
GCTGATACAAGGCTAAAGCT+TGG | 0.556830 | 5:-48766467 | MsaT027609.1:CDS |
GCTGATACAAGGCTAAAGCT+TGG | 0.556830 | 5:-48766536 | MsaT027609.1:CDS |
ATGATGCCATGAAGATTGGT+TGG | 0.558711 | 5:-48767614 | MsaT027609.1:CDS |
TCCCAAGGATTGACCAGGGG+TGG | 0.559408 | 5:+48767052 | None:intergenic |
AGTTCTAAAGGTGCATACTT+GGG | 0.560941 | 5:-48766512 | MsaT027609.1:CDS |
GTGATACTTTGGCTGATACA+AGG | 0.561337 | 5:-48766478 | MsaT027609.1:CDS |
GTGATACTTTGGCTGATACA+AGG | 0.561337 | 5:-48766547 | MsaT027609.1:CDS |
CCGTGAACCACAGGAGGAGG+AGG | 0.561880 | 5:+48768095 | None:intergenic |
GTGGTACTTTGCCTGATACA+AGG | 0.562508 | 5:-48766754 | MsaT027609.1:CDS |
GAGTGCGGTCTTGGGTGCAG+TGG | 0.564030 | 5:-48767727 | MsaT027609.1:CDS |
TCTCCCCTCTTTCAGCTGCA+GGG | 0.565059 | 5:+48767760 | None:intergenic |
ATGCAAGGAGTCAGGCAAGA+AGG | 0.567091 | 5:-48766869 | MsaT027609.1:CDS |
AAACTATGGCAGAAATGCGC+TGG | 0.567239 | 5:-48768338 | MsaT027609.1:CDS |
GTGATACTTTGGCGGATACA+GGG | 0.568488 | 5:-48766616 | MsaT027609.1:CDS |
ATTACACCAATTCCCATCTG+TGG | 0.570163 | 5:+48767662 | None:intergenic |
AGTAGAGACGATGCATGGAA+TGG | 0.572932 | 5:+48768193 | None:intergenic |
GACTTGTTCGCAGGGTCGAG+TGG | 0.575371 | 5:-48766842 | MsaT027609.1:CDS |
AAACAGAGTAGACTAACTAA+AGG | 0.575699 | 5:-48767891 | MsaT027609.1:CDS |
TGTTGTGGAGATGTTGACAG+TGG | 0.578376 | 5:+48767000 | None:intergenic |
CTGACTCCTTGCATGCCAGA+TGG | 0.584361 | 5:+48766878 | None:intergenic |
CATGTTCCAAATGACCTTGT+GGG | 0.588081 | 5:+48768270 | None:intergenic |
GGTGATTGTGGCAGCATTAG+GGG | 0.588227 | 5:+48768238 | None:intergenic |
TGGTTGGAAATCTGGAATGA+GGG | 0.589287 | 5:-48767598 | MsaT027609.1:CDS |
TGGACGGTAACCATCAAGAA+TGG | 0.589526 | 5:+48768217 | None:intergenic |
ACCATCAAGAATGGTGATTG+TGG | 0.590838 | 5:+48768226 | None:intergenic |
GTGGTACTTTGCTTGATACA+GGG | 0.591580 | 5:-48766823 | MsaT027609.1:CDS |
CCAAGAACCTCCTCCTCCTG+TGG | 0.595254 | 5:-48768102 | MsaT027609.1:CDS |
TTACACCAATTCCCATCTGT+GGG | 0.595749 | 5:+48767663 | None:intergenic |
TTGTGTGAGAGTCTTGACAT+AGG | 0.600208 | 5:+48768040 | None:intergenic |
ACAGTGGAGGAGGAAGTTGA+CGG | 0.601762 | 5:+48767016 | None:intergenic |
TGCCATAGTTTGGAGTCCAT+AGG | 0.605278 | 5:+48768350 | None:intergenic |
ATCAAGTCTGTGCATTGACG+AGG | 0.606145 | 5:+48767990 | None:intergenic |
GCCAATGAAGATACCTCACT+TGG | 0.608165 | 5:+48766256 | None:intergenic |
GCAAAGACCTCGTCGGTGTG+AGG | 0.608714 | 5:+48768152 | None:intergenic |
GTGATACTTTGGCTGATACA+GGG | 0.609258 | 5:-48766409 | MsaT027609.1:CDS |
GCTTGGCAGTTCTAAAGGTG+TGG | 0.615631 | 5:-48766312 | MsaT027609.1:CDS |
CTTCCCTGCAGCTGAAAGAG+GGG | 0.617250 | 5:-48767763 | MsaT027609.1:CDS |
CGATGCATGGAATGGATGGA+CGG | 0.620709 | 5:+48768201 | None:intergenic |
CAGTGGAGGAGGAAGTTGAC+GGG | 0.623769 | 5:+48767017 | None:intergenic |
TGTGGAGATGTTGACAGTGG+AGG | 0.625945 | 5:+48767003 | None:intergenic |
AGAGTAGACTAACTAAAGGA+TGG | 0.627717 | 5:-48767887 | MsaT027609.1:CDS |
GGGTAAACTTCAACCTCCCA+AGG | 0.632620 | 5:+48767037 | None:intergenic |
GCATGTTCCAAATGACCTTG+TGG | 0.633704 | 5:+48768269 | None:intergenic |
TACCCCGCAGAAACCACCCC+TGG | 0.634765 | 5:-48767065 | MsaT027609.1:CDS |
AATCTTTGGAATCTTGACGT+CGG | 0.641188 | 5:+48768313 | None:intergenic |
GACCAGGGGTGGTTTCTGCG+GGG | 0.641988 | 5:+48767063 | None:intergenic |
AAGGTGCTGACTTGTTCGCA+GGG | 0.642119 | 5:-48766850 | MsaT027609.1:CDS |
ACCCCTGGTCAATCCTTGGG+AGG | 0.647009 | 5:-48767050 | MsaT027609.1:CDS |
CCAACAGTAGAGACGATGCA+TGG | 0.649094 | 5:+48768188 | None:intergenic |
TCTTGGCCGTGAACCACAGG+AGG | 0.650102 | 5:+48768089 | None:intergenic |
GCTTGGCAGTTCTAAAGGTG+CGG | 0.654753 | 5:-48766381 | MsaT027609.1:CDS |
GCTTGGCAGTTCTAAAGGTG+CGG | 0.654753 | 5:-48766450 | MsaT027609.1:CDS |
GCTTGGCAGTTCTAAAGGTG+CGG | 0.654753 | 5:-48766588 | MsaT027609.1:CDS |
AATGAGCCAAGCACCAAGTG+AGG | 0.655123 | 5:-48766269 | None:intergenic |
TGTTGATCCTCACACCGACG+AGG | 0.655379 | 5:-48768159 | MsaT027609.1:CDS |
AGAGTCGAGTGATACTTTGG+CGG | 0.658205 | 5:-48766624 | MsaT027609.1:CDS |
CAGTTTGGCAAAGACCTCGT+CGG | 0.663811 | 5:+48768145 | None:intergenic |
GACTTGTTTGCAGAGTCGAG+TGG | 0.669905 | 5:-48766773 | MsaT027609.1:CDS |
AACCTCCCAAGGATTGACCA+GGG | 0.674108 | 5:+48767048 | None:intergenic |
AAAGTTTACTACTTCCCACA+AGG | 0.678948 | 5:-48768284 | MsaT027609.1:CDS |
GGAGAAATTAACTGAGAGTG+CGG | 0.686397 | 5:-48767742 | MsaT027609.1:CDS |
ACCTCCCAAGGATTGACCAG+GGG | 0.687043 | 5:+48767049 | None:intergenic |
TGAAAACAACGGAATCTTCG+GGG | 0.698750 | 5:+48767835 | None:intergenic |
CACGGCCAAGAAGACGACGA+TGG | 0.706758 | 5:-48768077 | MsaT027609.1:CDS |
GGATTTGGCTAACAAGAACG+TGG | 0.730069 | 5:-48767706 | MsaT027609.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 48766271 | 48768369 | 48766271 | ID=MsaG027609 |
Chr5 | mRNA | 48766271 | 48768369 | 48766271 | ID=MsaT027609.1;Parent=MsaG027609 |
Chr5 | exon | 48766271 | 48767107 | 48766271 | ID=MsaT027609.1.exon2;Parent=MsaT027609.1 |
Chr5 | CDS | 48766271 | 48767107 | 48766271 | ID=cds.MsaT027609.1;Parent=MsaT027609.1 |
Chr5 | exon | 48767485 | 48768369 | 48767485 | ID=MsaT027609.1.exon1;Parent=MsaT027609.1 |
Chr5 | CDS | 48767485 | 48768369 | 48767485 | ID=cds.MsaT027609.1;Parent=MsaT027609.1 |
Gene Sequence |
Protein sequence |