AlfalfaGEDB | MsaG027853

M. sativa ssp. caerulea / MsaG027853

KEGG: -
GO: -
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027853	XP_003615282.1	92.941	255	16	2	44	298	1	253	2.32e-147	424

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027853	sp\|Q9LS08\|BH032_ARATH	38.835	206	82	5	76	263	128	307	2.71e-29	117

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027853	tr\|G7KBK5\|G7KBK5_MEDTR	92.941	255	16	2	44	298	1	253	1.11e-147	424

TFs/TRs:

Gene ID	Type	Classification
MsaG027853	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000045	MsaG027853	0.835193	3.526927e-56	1.188195e-53
MsaG000107	MsaG027853	0.835081	3.761992e-56	1.263213e-53
MsaG000325	MsaG027853	0.803846	4.832917e-49	7.133476e-47
MsaG000359	MsaG027853	0.819840	1.645576e-52	3.603778e-50
MsaG000419	MsaG027853	0.854591	2.145322e-61	1.365942e-58
MsaG000426	MsaG027853	0.822362	4.346271e-53	1.017806e-50
MsaG000435	MsaG027853	0.818174	3.922131e-52	8.223292e-50
MsaG000439	MsaG027853	0.829589	8.493504e-55	2.429367e-52
MsaG000497	MsaG027853	0.849524	5.815838e-60	3.101551e-57
MsaG000707	MsaG027853	0.811717	1.044975e-50	1.860999e-48
MsaG000756	MsaG027853	0.817938	4.431050e-52	9.233892e-50
MsaG001377	MsaG027853	0.819190	2.311890e-52	4.977403e-50
MsaG001399	MsaG027853	0.858158	1.949037e-62	1.413703e-59
MsaG001438	MsaG027853	0.837432	9.565173e-57	3.447730e-54
MsaG001724	MsaG027853	0.825869	6.586960e-54	1.697286e-51
MsaG001932	MsaG027853	0.825257	9.183150e-54	2.326330e-51
MsaG002184	MsaG027853	0.831334	3.193927e-55	9.604029e-53
MsaG002214	MsaG027853	0.801979	1.170210e-48	1.654645e-46
MsaG002350	MsaG027853	0.801147	1.729646e-48	2.399900e-46
MsaG003039	MsaG027853	0.809023	3.959772e-50	6.604720e-48
MsaG003190	MsaG027853	0.810183	2.237590e-50	3.838118e-48
MsaG003291	MsaG027853	0.808358	5.483533e-50	9.000757e-48
MsaG003327	MsaG027853	0.805583	2.106115e-49	3.236445e-47
MsaG003461	MsaG027853	0.812618	6.661640e-51	1.213067e-48
MsaG003632	MsaG027853	0.805464	2.229891e-49	3.417180e-47
MsaG003659	MsaG027853	0.832441	1.706846e-55	5.300838e-53
MsaG003712	MsaG027853	0.842893	3.645983e-58	1.560211e-55
MsaG003715	MsaG027853	0.838767	4.352674e-57	1.634933e-54
MsaG003759	MsaG027853	0.810705	1.727815e-50	3.001764e-48
MsaG003795	MsaG027853	0.813052	5.356828e-51	9.861146e-49
MsaG003804	MsaG027853	0.810587	1.832293e-50	3.174115e-48
MsaG003863	MsaG027853	0.839609	2.639461e-57	1.017774e-54
MsaG003901	MsaG027853	0.832090	2.083173e-55	6.404423e-53
MsaG004014	MsaG027853	0.809217	3.601420e-50	6.034771e-48
MsaG004092	MsaG027853	0.847874	1.659052e-59	8.366779e-57
MsaG004112	MsaG027853	0.816462	9.479729e-52	1.901802e-49
MsaG004257	MsaG027853	0.808176	5.996130e-50	9.799279e-48
MsaG004273	MsaG027853	0.812044	8.876231e-51	1.593509e-48
MsaG004711	MsaG027853	0.838327	5.649219e-57	2.092864e-54
MsaG004848	MsaG027853	0.802430	9.460426e-49	1.351545e-46
MsaG005055	MsaG027853	0.874704	1.134719e-67	1.610684e-64
MsaG005101	MsaG027853	0.813550	4.168760e-51	7.770343e-49
MsaG005210	MsaG027853	0.831266	3.318151e-55	9.957465e-53
MsaG005354	MsaG027853	0.852592	8.003506e-61	4.746595e-58
MsaG005568	MsaG027853	0.808582	4.916402e-50	8.113530e-48
MsaG005827	MsaG027853	0.819311	2.169877e-52	4.686554e-50
MsaG005770	MsaG027853	0.807233	9.487402e-50	1.515776e-47
MsaG005886	MsaG027853	0.808340	5.532347e-50	9.077029e-48
MsaG005891	MsaG027853	0.823344	2.572684e-53	6.186699e-51
MsaG005964	MsaG027853	0.827722	2.388258e-54	6.480323e-52
MsaG006141	MsaG027853	0.816499	9.303255e-52	1.868190e-49
MsaG006090	MsaG027853	0.811166	1.374428e-50	2.414928e-48
MsaG006127	MsaG027853	0.802561	8.890342e-49	1.273952e-46
MsaG006217	MsaG027853	0.801901	1.213944e-48	1.713477e-46
MsaG006257	MsaG027853	0.802087	1.111854e-48	1.576011e-46
MsaG006553	MsaG027853	0.825779	6.915266e-54	1.777390e-51
MsaG006558	MsaG027853	0.857593	2.861625e-62	2.032387e-59
MsaG006683	MsaG027853	0.871281	1.572623e-66	1.924094e-63
MsaG006742	MsaG027853	0.853022	6.037699e-61	3.635724e-58
MsaG006855	MsaG027853	0.876488	2.793441e-68	4.292474e-65
MsaG006898	MsaG027853	0.804644	3.303906e-49	4.967537e-47
MsaG006988	MsaG027853	0.802063	1.124643e-48	1.593259e-46
MsaG007354	MsaG027853	0.824261	1.572704e-53	3.877080e-51
MsaG007501	MsaG027853	0.844555	1.315897e-58	5.941997e-56
MsaG007502	MsaG027853	0.819162	2.345903e-52	5.046947e-50
MsaG007626	MsaG027853	0.813829	3.622360e-51	6.799416e-49
MsaG007684	MsaG027853	0.829706	7.954832e-55	2.282870e-52
MsaG007794	MsaG027853	0.808662	4.725936e-50	7.814602e-48
MsaG007828	MsaG027853	0.819944	1.558729e-52	3.423087e-50
MsaG008050	MsaG027853	0.807145	9.903789e-50	1.579041e-47
MsaG008250	MsaG027853	0.822077	5.058432e-53	1.175474e-50
MsaG008434	MsaG027853	0.842920	3.586835e-58	1.536218e-55
MsaG008634	MsaG027853	0.861565	1.852887e-63	1.529023e-60
MsaG008903	MsaG027853	0.814843	2.167166e-51	4.172719e-49
MsaG009015	MsaG027853	0.854107	2.956289e-61	1.849963e-58
MsaG009011	MsaG027853	0.826865	3.823716e-54	1.012930e-51
MsaG009067	MsaG027853	0.833350	1.017172e-55	3.244134e-53
MsaG009201	MsaG027853	0.812600	6.721624e-51	1.223467e-48
MsaG009389	MsaG027853	0.800331	2.533621e-48	3.451251e-46
MsaG009603	MsaG027853	0.811601	1.107090e-50	1.966052e-48
MsaG009850	MsaG027853	0.812824	6.004859e-51	1.099124e-48
MsaG010104	MsaG027853	0.815157	1.847057e-51	3.584686e-49
MsaG010112	MsaG027853	0.860557	3.741154e-63	2.971461e-60
MsaG010372	MsaG027853	0.816748	8.188798e-52	1.654918e-49
MsaG010862	MsaG027853	0.803671	5.252590e-49	7.721667e-47
MsaG011018	MsaG027853	0.810458	1.952798e-50	3.372370e-48
MsaG011592	MsaG027853	0.813448	4.389066e-51	8.160108e-49
MsaG011605	MsaG027853	0.813932	3.437911e-51	6.469892e-49
MsaG011613	MsaG027853	0.806723	1.214675e-49	1.917548e-47
MsaG011833	MsaG027853	0.802228	1.040583e-48	1.479727e-46
MsaG011812	MsaG027853	0.815179	1.826780e-51	3.547320e-49
MsaG011941	MsaG027853	0.847905	1.626464e-59	8.210751e-57
MsaG011952	MsaG027853	0.859481	7.871035e-63	6.000262e-60
MsaG012037	MsaG027853	0.836916	1.294367e-56	4.592543e-54
MsaG012454	MsaG027853	0.804348	3.804218e-49	5.681022e-47
MsaG012467	MsaG027853	0.814716	2.310916e-51	4.435241e-49
MsaG012490	MsaG027853	0.806582	1.300939e-49	2.046915e-47
MsaG012496	MsaG027853	0.900317	1.904501e-77	9.928400e-74
MsaG012772	MsaG027853	0.822081	5.046716e-53	1.172879e-50
MsaG012778	MsaG027853	0.817800	4.758973e-52	9.881959e-50
MsaG012805	MsaG027853	0.819697	1.773586e-52	3.869435e-50
MsaG013786	MsaG027853	0.802458	9.335652e-49	1.334593e-46
MsaG015722	MsaG027853	0.838752	4.392385e-57	1.649058e-54
MsaG015851	MsaG027853	0.817500	5.557643e-52	1.145162e-49
MsaG016421	MsaG027853	0.826387	4.966493e-54	1.298267e-51
MsaG016495	MsaG027853	0.811739	1.033520e-50	1.841612e-48
MsaG017057	MsaG027853	0.815261	1.752315e-51	3.409855e-49
MsaG017045	MsaG027853	0.800057	2.878929e-48	3.897548e-46
MsaG017105	MsaG027853	0.804566	3.429326e-49	5.146938e-47
MsaG017150	MsaG027853	0.853094	5.760931e-61	3.477681e-58
MsaG017303	MsaG027853	0.830811	4.287230e-55	1.269846e-52
MsaG017183	MsaG027853	0.811120	1.406194e-50	2.467931e-48
MsaG017286	MsaG027853	0.827524	2.663168e-54	7.186186e-52
MsaG017376	MsaG027853	0.821478	6.947792e-53	1.588996e-50
MsaG017546	MsaG027853	0.825134	9.813990e-54	2.477812e-51
MsaG017620	MsaG027853	0.841882	6.741200e-58	2.792897e-55
MsaG017704	MsaG027853	0.800584	2.251408e-48	3.084463e-46
MsaG018175	MsaG027853	0.821051	8.704837e-53	1.968575e-50
MsaG018373	MsaG027853	0.800473	2.371366e-48	3.240625e-46
MsaG018588	MsaG027853	0.823802	2.013199e-53	4.901713e-51
MsaG018786	MsaG027853	0.801006	1.848232e-48	2.556268e-46
MsaG018848	MsaG027853	0.815742	1.370665e-51	2.699848e-49
MsaG019084	MsaG027853	0.838315	5.687714e-57	2.106394e-54
MsaG019092	MsaG027853	0.842379	4.987356e-58	2.099361e-55
MsaG019188	MsaG027853	0.816098	1.142628e-51	2.271118e-49
MsaG019275	MsaG027853	0.805418	2.279362e-49	3.489304e-47
MsaG019287	MsaG027853	0.834966	4.022200e-56	1.345876e-53
MsaG019307	MsaG027853	0.810538	1.877025e-50	3.247816e-48
MsaG019308	MsaG027853	0.847597	1.975199e-59	9.867755e-57
MsaG019525	MsaG027853	0.826467	4.754955e-54	1.245779e-51
MsaG019657	MsaG027853	0.836371	1.779930e-56	6.212769e-54
MsaG019807	MsaG027853	0.833314	1.038510e-55	3.308609e-53
MsaG019935	MsaG027853	0.822213	4.705890e-53	1.097553e-50
MsaG020003	MsaG027853	0.813512	4.250064e-51	7.914342e-49
MsaG020030	MsaG027853	0.814540	2.527134e-51	4.828766e-49
MsaG020202	MsaG027853	0.840636	1.428130e-57	5.687419e-55
MsaG020353	MsaG027853	0.801054	1.806906e-48	2.501756e-46
MsaG020402	MsaG027853	0.813838	3.606041e-51	6.770302e-49
MsaG020434	MsaG027853	0.816795	7.992245e-52	1.617145e-49
MsaG020420	MsaG027853	0.878604	5.154458e-69	8.722015e-66
MsaG020467	MsaG027853	0.846355	4.305193e-59	2.063236e-56
MsaG020480	MsaG027853	0.823868	1.942638e-53	4.738223e-51
MsaG020716	MsaG027853	0.812172	8.327306e-51	1.499656e-48
MsaG020718	MsaG027853	0.871408	1.428950e-66	1.757839e-63
MsaG020866	MsaG027853	0.815525	1.531353e-51	2.999778e-49
MsaG021049	MsaG027853	0.808425	5.308335e-50	8.727254e-48
MsaG021294	MsaG027853	0.836603	1.554169e-56	5.462371e-54
MsaG021650	MsaG027853	0.800422	2.427729e-48	3.313936e-46
MsaG021775	MsaG027853	0.813701	3.863607e-51	7.228641e-49
MsaG022633	MsaG027853	0.800080	2.847334e-48	3.856746e-46
MsaG022547	MsaG027853	0.818720	2.953278e-52	6.280081e-50
MsaG023268	MsaG027853	0.806434	1.397336e-49	2.190983e-47
MsaG023475	MsaG027853	0.809903	2.568940e-50	4.376745e-48
MsaG023615	MsaG027853	0.823030	3.043615e-53	7.257007e-51
MsaG023643	MsaG027853	0.825365	8.658150e-54	2.199961e-51
MsaG023648	MsaG027853	0.827535	2.646962e-54	7.144770e-52
MsaG023960	MsaG027853	0.844516	1.348429e-58	6.080683e-56
MsaG024008	MsaG027853	0.841685	7.593129e-58	3.125979e-55
MsaG024114	MsaG027853	0.824484	1.394621e-53	3.459073e-51
MsaG024272	MsaG027853	0.825364	8.664151e-54	2.201408e-51
MsaG024546	MsaG027853	0.813241	4.871017e-51	9.009174e-49
MsaG024958	MsaG027853	0.806670	1.246429e-49	1.965205e-47
MsaG026478	MsaG027853	0.831732	2.550493e-55	7.760083e-53
MsaG026718	MsaG027853	0.817569	5.363140e-52	1.107027e-49
MsaG026849	MsaG027853	0.853719	3.820152e-61	2.357651e-58
MsaG026929	MsaG027853	0.834282	5.962988e-56	1.954945e-53
MsaG027026	MsaG027853	0.816823	7.878444e-52	1.595267e-49
MsaG026987	MsaG027853	0.848393	1.194667e-59	6.129590e-57
MsaG027195	MsaG027853	0.852683	7.538635e-61	4.485304e-58
MsaG027395	MsaG027853	0.846223	4.677573e-59	2.231796e-56
MsaG027505	MsaG027853	0.809835	2.656091e-50	4.517981e-48
MsaG027557	MsaG027853	0.832211	1.944713e-55	5.999350e-53
MsaG027775	MsaG027853	0.816754	8.161960e-52	1.649792e-49
MsaG027776	MsaG027853	0.804558	3.441914e-49	5.164896e-47
MsaG027752	MsaG027853	0.852738	7.276385e-61	4.337558e-58
MsaG027853	MsaG027992	0.861925	1.439451e-63	1.204615e-60
MsaG027853	MsaG028040	0.825328	8.833846e-54	2.242317e-51
MsaG027853	MsaG028109	0.837919	7.184306e-57	2.628360e-54
MsaG027853	MsaG028324	0.853040	5.968912e-61	3.596459e-58
MsaG027853	MsaG028334	0.852262	9.925000e-61	5.818791e-58
MsaG027853	MsaG028407	0.836801	1.384393e-56	4.894843e-54
MsaG027853	MsaG028568	0.805042	2.729925e-49	4.142887e-47
MsaG027853	MsaG028825	0.854863	1.790643e-61	1.151144e-58
MsaG027853	MsaG029033	0.802931	7.465760e-49	1.078883e-46
MsaG027853	MsaG029066	0.801934	1.195039e-48	1.688041e-46
MsaG027853	MsaG029245	0.818163	3.943855e-52	8.266588e-50
MsaG027853	MsaG029349	0.816260	1.051909e-51	2.099458e-49
MsaG027853	MsaG029470	0.834787	4.459507e-56	1.484287e-53
MsaG027853	MsaG029482	0.810847	1.610564e-50	2.807764e-48
MsaG027853	MsaG029545	0.823300	2.635008e-53	6.328753e-51
MsaG027853	MsaG029731	0.836388	1.761941e-56	6.153212e-54
MsaG027853	MsaG029792	0.880600	1.015683e-69	1.885497e-66
MsaG027853	MsaG030039	0.824007	1.802566e-53	4.413345e-51
MsaG027853	MsaG030070	0.879852	1.873728e-69	3.358274e-66
MsaG027853	MsaG030276	0.807623	7.850551e-50	1.266008e-47
MsaG027853	MsaG031153	0.812315	7.752261e-51	1.401072e-48
MsaG027853	MsaG031201	0.813489	4.299596e-51	8.001738e-49
MsaG027853	MsaG031494	0.805765	1.928890e-49	2.976888e-47
MsaG027853	MsaG032260	0.854318	2.571483e-61	1.621437e-58
MsaG027853	MsaG032286	0.827841	2.236978e-54	6.090199e-52
MsaG027853	MsaG032272	0.846990	2.892998e-59	1.416191e-56
MsaG027853	MsaG032228	0.834356	5.714303e-56	1.877667e-53
MsaG027853	MsaG032491	0.812342	7.648894e-51	1.383336e-48
MsaG027853	MsaG033815	0.840188	1.868328e-57	7.336506e-55
MsaG027853	MsaG033965	0.827863	2.210367e-54	6.021298e-52
MsaG027853	MsaG034214	0.801182	1.701905e-48	2.363257e-46
MsaG027853	MsaG034130	0.802616	8.662512e-49	1.242858e-46
MsaG027853	MsaG034835	0.803266	6.367214e-49	9.272917e-47
MsaG027853	MsaG035001	0.847808	1.729298e-59	8.701900e-57
MsaG027853	MsaG035530	0.866893	4.107835e-65	4.189359e-62
MsaG027853	MsaG035947	0.851148	2.045982e-60	1.153643e-57
MsaG027853	MsaG038030	0.827893	2.173331e-54	5.925568e-52
MsaG027853	MsaG039781	0.809127	3.762387e-50	6.291293e-48
MsaG027853	MsaG039946	0.809527	3.091079e-50	5.218916e-48
MsaG027853	MsaG040095	0.837069	1.183276e-56	4.217971e-54
MsaG027853	MsaG040379	0.835478	2.990745e-56	1.016242e-53
MsaG027853	MsaG040459	0.824098	1.716744e-53	4.213539e-51
MsaG027853	MsaG041224	0.823187	2.798376e-53	6.700570e-51
MsaG027853	MsaG041234	0.816373	9.923574e-52	1.986352e-49
MsaG027853	MsaG041463	0.824168	1.653050e-53	4.064839e-51
MsaG027853	MsaG042000	0.813034	5.405020e-51	9.945524e-49
MsaG027853	MsaG042071	0.815650	1.436579e-51	2.823191e-49
MsaG027853	MsaG042102	0.802784	8.003165e-49	1.152632e-46
MsaG027853	MsaG042566	0.811870	9.680535e-51	1.730547e-48
MsaG027853	MsaG042717	0.828135	1.902320e-54	5.221992e-52
MsaG027853	MsaG043063	0.805783	1.912380e-49	2.952634e-47
MsaG027853	MsaG043804	0.878482	5.684046e-69	9.563502e-66
MsaG027853	MsaG044319	0.823051	3.010373e-53	7.181886e-51
MsaG027853	MsaG044516	0.831836	2.405568e-55	7.341050e-53
MsaG027853	MsaG044617	0.812869	5.871598e-51	1.075938e-48
MsaG027853	MsaG044799	0.803422	5.912691e-49	8.641965e-47
MsaG027853	MsaG044916	0.808337	5.541150e-50	9.090707e-48
MsaG027853	MsaG044918	0.839830	2.313541e-57	8.983546e-55
MsaG027853	MsaG044934	0.842745	3.990499e-58	1.699556e-55
MsaG027853	MsaG044971	0.887695	2.477082e-72	6.487920e-69
MsaG027853	MsaG044957	0.858986	1.106579e-62	8.278850e-60
MsaG027853	MsaG045060	0.800631	2.202226e-48	3.020357e-46
MsaG027853	MsaG045062	0.812974	5.570721e-51	1.023478e-48
MsaG027853	MsaG045093	0.811036	1.466328e-50	2.568187e-48
MsaG027853	MsaG045130	0.801046	1.813406e-48	2.510363e-46
MsaG027853	MsaG045200	0.805243	2.479557e-49	3.780395e-47
MsaG027853	MsaG045251	0.807423	8.649500e-50	1.388235e-47
MsaG027853	MsaG045412	0.828627	1.449362e-54	4.033828e-52
MsaG027853	MsaG045568	0.813753	3.762834e-51	7.049508e-49
MsaG027853	MsaG045820	0.805007	2.776916e-49	4.210691e-47
MsaG027853	MsaG045822	0.802597	8.741325e-49	1.253622e-46
MsaG027853	MsaG045834	0.812629	6.623359e-51	1.206435e-48
MsaG027853	MsaG045975	0.805817	1.881426e-49	2.907169e-47
MsaG027853	MsaG045997	0.853592	4.152101e-61	2.550825e-58
MsaG027853	MsaG046028	0.806341	1.461600e-49	2.286653e-47
MsaG027853	MsaG046054	0.830829	4.242778e-55	1.257349e-52
MsaG027853	MsaG046143	0.818958	2.609661e-52	5.584218e-50
MsaG027853	MsaG046104	0.810358	2.052164e-50	3.535278e-48
MsaG027853	MsaG046247	0.802841	7.788600e-49	1.123185e-46
MsaG027853	MsaG046265	0.857326	3.429498e-62	2.411895e-59
MsaG027853	MsaG046379	0.815443	1.596555e-51	3.121084e-49
MsaG027853	MsaG046586	0.808714	4.608977e-50	7.630711e-48
MsaG027853	MsaG046701	0.861754	1.623079e-63	1.349257e-60
MsaG027853	MsaG046930	0.887496	2.949223e-72	7.647220e-69
MsaG027853	MsaG047011	0.821688	6.218217e-53	1.430090e-50
MsaG027853	MsaG001564	0.858144	1.967794e-62	1.426543e-59
MsaG027853	MsaG001950	0.858765	1.287562e-62	9.553138e-60
MsaG027853	MsaG004537	0.820141	1.405345e-52	3.102579e-50
MsaG027853	MsaG004304	0.818220	3.829521e-52	8.038666e-50
MsaG027853	MsaG002954	0.899704	3.497375e-77	1.758137e-73
MsaG027853	MsaG001894	0.854103	2.963788e-61	1.854390e-58
MsaG027853	MsaG001560	0.805515	2.175554e-49	3.337879e-47
MsaG027853	MsaG008854	0.800602	2.232672e-48	3.060040e-46
MsaG027853	MsaG009209	0.818571	3.191948e-52	6.761250e-50
MsaG027853	MsaG010534	0.813433	4.422946e-51	8.220029e-49
MsaG027853	MsaG009163	0.840697	1.376521e-57	5.492518e-55
MsaG027853	MsaG007437	0.842321	5.164549e-58	2.169844e-55
MsaG027853	MsaG013546	0.816212	1.077693e-51	2.148339e-49
MsaG027853	MsaG014164	0.804412	3.689940e-49	5.518445e-47
MsaG027853	MsaG017401	0.801309	1.602935e-48	2.232263e-46
MsaG027853	MsaG013379	0.805166	2.572441e-49	3.915140e-47
MsaG027853	MsaG013873	0.821925	5.482078e-53	1.268778e-50
MsaG027853	MsaG014280	0.802542	8.971202e-49	1.284965e-46
MsaG027853	MsaG013041	0.813896	3.501676e-51	6.583855e-49
MsaG027853	MsaG013392	0.817024	7.105258e-52	1.446226e-49
MsaG027853	MsaG021945	0.825165	9.652376e-54	2.439057e-51
MsaG027853	MsaG020277	0.831323	3.213220e-55	9.659082e-53
MsaG027853	MsaG019828	0.836880	1.322199e-56	4.686098e-54
MsaG027853	MsaG020283	0.840363	1.682489e-57	6.643456e-55
MsaG027853	MsaG028121	0.830487	5.141529e-55	1.508718e-52
MsaG027853	MsaG029782	0.802856	7.732293e-49	1.115473e-46
MsaG027853	MsaG027101	0.800459	2.386976e-48	3.260953e-46
MsaG027853	MsaG029395	0.813967	3.378515e-51	6.363533e-49
MsaG027853	MsaG025025	0.806386	1.429843e-49	2.239356e-47
MsaG027853	MsaG028944	0.809145	3.729495e-50	6.238972e-48
MsaG027853	MsaG033233	0.843370	2.725523e-58	1.184326e-55
MsaG027853	MsaG034732	0.856497	6.002658e-62	4.095296e-59
MsaG027853	MsaG031801	0.833618	8.728191e-56	2.805829e-53
MsaG027853	MsaG029994	0.818659	3.048982e-52	6.473380e-50
MsaG027853	MsaG030748	0.832551	1.603586e-55	4.996089e-53
MsaG027853	MsaG032683	0.804136	4.210517e-49	6.256849e-47
MsaG027853	MsaG033504	0.827087	3.385235e-54	9.023408e-52
MsaG027853	MsaG032664	0.811348	1.255895e-50	2.216485e-48
MsaG027853	MsaG032074	0.903479	7.779081e-79	4.891555e-75
MsaG027853	MsaG033381	0.834021	6.925682e-56	2.252818e-53
MsaG027853	MsaG037798	0.801580	1.411537e-48	1.977821e-46
MsaG027853	MsaG037322	0.822840	3.369279e-53	7.992256e-51
MsaG027853	MsaG036358	0.854543	2.215529e-61	1.408158e-58
MsaG027853	MsaG037450	0.802687	8.379490e-49	1.204162e-46
MsaG027853	MsaG038591	0.821324	7.538051e-53	1.717018e-50
MsaG027853	MsaG037381	0.826119	5.747435e-54	1.491274e-51
MsaG027853	MsaG037879	0.821887	5.594698e-53	1.293529e-50
MsaG027853	MsaG036787	0.875350	6.846658e-68	9.997908e-65
MsaG027853	MsaG036020	0.832822	1.374671e-55	4.316701e-53
MsaG027853	MsaG037051	0.800309	2.559420e-48	3.484669e-46
MsaG027853	MsaG037447	0.822204	4.727812e-53	1.102412e-50
MsaG027853	MsaG035795	0.813083	5.274916e-51	9.717749e-49
MsaG027853	MsaG045038	0.820764	1.012978e-52	2.273308e-50
MsaG027853	MsaG041443	0.825635	7.479685e-54	1.914647e-51
MsaG027853	MsaG041375	0.808383	5.418866e-50	8.899782e-48
MsaG027853	MsaG041852	0.812860	5.897832e-51	1.080510e-48
MsaG027853	MsaG047025	0.813372	4.559892e-51	8.461435e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027853	MtrunA17_Chr5g0427361	92.941	255	16	2	44	298	1	253	2.13e-151	424
MsaG027853	MtrunA17_Chr7g0255961	36.224	196	94	4	69	263	64	229	1.83e-31	117
MsaG027853	MtrunA17_Chr5g0412371	34.914	232	110	7	45	267	1	200	4.25e-30	113
MsaG027853	MtrunA17_Chr1g0198801	37.379	206	94	4	74	275	152	326	2.37e-27	108
MsaG027853	MtrunA17_Chr2g0325521	39.506	162	73	1	73	234	52	188	4.28e-24	98.2
MsaG027853	MtrunA17_Chr3g0113721	30.151	199	98	3	74	262	33	200	4.58e-22	92.0
MsaG027853	MtrunA17_Chr4g0041051	39.634	164	73	2	71	234	60	197	5.22e-21	90.1
MsaG027853	MtrunA17_Chr4g0045901	32.836	201	91	4	73	263	68	234	2.41e-14	71.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG027853	AT3G25710.1	38.835	206	82	5	76	263	128	307	2.76e-30	117
MsaG027853	AT3G56770.1	36.458	192	89	3	74	263	39	199	1.96e-29	112
MsaG027853	AT1G68810.1	40.761	184	77	3	52	234	152	304	1.45e-28	113
MsaG027853	AT2G41130.1	35.233	193	97	2	71	263	58	222	5.29e-25	101
MsaG027853	AT4G38070.1	35.465	172	78	4	72	242	83	222	4.08e-22	93.2
MsaG027853	AT2G40200.1	29.412	187	98	3	76	259	59	214	1.92e-18	83.2

Find 86 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATCTCATTCTTTCCTTTC+TGG	0.091456	5:+53414724	None:intergenic
CAACCTCACGAGCCCGTTTC+CGG	0.268510	5:+53412155	None:intergenic
AACCCGTAGAATCTTCTTAA+AGG	0.270050	5:+53413015	None:intergenic
CGCTAACAACGACGCCTTAT+CGG	0.275455	5:+53412654	None:intergenic
GGAGAAGGAGGTAGAAGCTT+TGG	0.321763	5:-53412248	MsaT027853.1:CDS
CGTTTCCGGCCTAACAAAAT+CGG	0.353827	5:+53412169	None:intergenic
AAGAAGCATGCAAGAGTCAT+AGG	0.355128	5:-53412921	MsaT027853.1:CDS
ACAAGCAATCCGTTCGGTTC+TGG	0.360599	5:-53412371	MsaT027853.1:CDS
GAAAGCTGTTATAGAGAATA+GGG	0.375468	5:-53412215	MsaT027853.1:CDS
AAAGGTGAAGGTGGTGATAA+TGG	0.377501	5:-53412277	MsaT027853.1:CDS
TTATCACCACCTTCACCTTT+AGG	0.394483	5:+53412280	None:intergenic
TGAAAGCTGTTATAGAGAAT+AGG	0.402504	5:-53412216	MsaT027853.1:CDS
CCGTTCGGTTCTGGCGAAAC+CGG	0.414266	5:-53412362	MsaT027853.1:CDS
GGAGGTAGAAGCTTTGGAAA+GGG	0.416970	5:-53412242	MsaT027853.1:CDS
GACATATGTACAAATATAAC+AGG	0.417038	5:-53413318	MsaT027853.1:intron
GGCGTCGTTGTTAGCGGAAG+TGG	0.431203	5:-53412647	MsaT027853.1:CDS
TGAATGACCTTTGTGGTGTT+AGG	0.434067	5:+53412835	None:intergenic
CTCATTCTTTCCTTTCTGGT+CGG	0.437006	5:+53414728	None:intergenic
GATTCTACGGGTTTGAGAGC+TGG	0.437215	5:-53413005	MsaT027853.1:CDS
GCGCCGACAGCTTTCGTTGA+AGG	0.444854	5:+53414750	None:intergenic
TATTGCGGTGGTAGAGAGGA+AGG	0.446965	5:-53412460	MsaT027853.1:CDS
GACAAAGAGTGTTGTGGTGG+TGG	0.449486	5:-53412308	MsaT027853.1:CDS
GTCATCATCTCAGCTCGAAC+CGG	0.451864	5:+53412343	None:intergenic
TCGTCTGATTCTCCCGGAAA+AGG	0.459286	5:+53412496	None:intergenic
CCTCCTTTAAGAAGATTCTA+CGG	0.460188	5:-53413018	MsaT027853.1:CDS
GAGGTAGAAGCTTTGGAAAG+GGG	0.467743	5:-53412241	MsaT027853.1:CDS
GGATTGCTTGTGTTAGATCA+TGG	0.468042	5:+53412383	None:intergenic
GAAGAAGGAAGCTGATGAAA+TGG	0.473728	5:-53412605	MsaT027853.1:CDS
CTCCTTTAAGAAGATTCTAC+GGG	0.475979	5:-53413017	MsaT027853.1:CDS
TAATGGAAGAGAGGAGAAGG+AGG	0.476276	5:-53412260	MsaT027853.1:CDS
CTTGTTGTTGAGGAAGAATG+AGG	0.491130	5:-53412125	MsaT027853.1:CDS
ACACGTGAAACGGTCGAAGA+AGG	0.492375	5:-53412620	MsaT027853.1:CDS
TCTTCATGCAGCGGAGAACC+TGG	0.503192	5:-53412553	MsaT027853.1:CDS
CGATAAGGCGTCGTTGTTAG+CGG	0.504065	5:-53412653	MsaT027853.1:CDS
AGGAGGTAGAAGCTTTGGAA+AGG	0.513380	5:-53412243	MsaT027853.1:CDS
TGATAATGGAAGAGAGGAGA+AGG	0.516421	5:-53412263	MsaT027853.1:CDS
ATGGCGAATCGTCGCAATGA+CGG	0.517551	5:-53412586	MsaT027853.1:CDS
AAGTGGTGCAACACGTGAAA+CGG	0.520362	5:-53412630	MsaT027853.1:CDS
AGAAGCATGCAAGAGTCATA+GGG	0.522990	5:-53412920	MsaT027853.1:CDS
ACCTGGTTCAGTTAATTCTA+CGG	0.531153	5:-53412536	MsaT027853.1:CDS
GATGGATAATAAAGACTATG+AGG	0.533000	5:-53412983	MsaT027853.1:CDS
GCTGAGATGATGACGGTTGG+AGG	0.537478	5:-53412334	MsaT027853.1:CDS
AGGCCGGAAACGGGCTCGTG+AGG	0.537633	5:-53412158	MsaT027853.1:CDS
AGTGTGTTGTGAGGATCGAC+CGG	0.538414	5:-53412413	MsaT027853.1:CDS
GAGTTATTGCGGTGGTAGAG+AGG	0.542449	5:-53412464	MsaT027853.1:CDS
TTGACCGTTCCTTGTTGTTG+AGG	0.542986	5:-53412135	MsaT027853.1:CDS
GTTTCCGGCCTAACAAAATC+GGG	0.543564	5:+53412170	None:intergenic
AGGTGGTGATAATGGAAGAG+AGG	0.544625	5:-53412269	MsaT027853.1:CDS
GTCGCCTCGTCTGATTCTCC+CGG	0.551846	5:+53412490	None:intergenic
GTGGAGTGGCCTAAAGGTGA+AGG	0.554899	5:-53412289	MsaT027853.1:CDS
GCTGTCGGCGCCGACCAGAA+AGG	0.561414	5:-53414738	MsaT027853.1:CDS
ATTGCGGTGGTAGAGAGGAA+GGG	0.561452	5:-53412459	MsaT027853.1:CDS
TTGCGGTGGTAGAGAGGAAG+GGG	0.563178	5:-53412458	MsaT027853.1:CDS
CGAGCTGAGATGATGACGGT+TGG	0.565864	5:-53412337	MsaT027853.1:CDS
AGATGATGACGGTTGGAGGT+AGG	0.573370	5:-53412330	MsaT027853.1:CDS
AGGTTCTCCGCTGCATGAAG+AGG	0.577024	5:+53412555	None:intergenic
CTACGGGTTTGAGAGCTGGA+TGG	0.582407	5:-53413001	MsaT027853.1:CDS
ATTCCTTCAACGAAAGCTGT+CGG	0.583703	5:-53414753	MsaT027853.1:CDS
GTGGTGGTGGAGTGGCCTAA+AGG	0.584300	5:-53412295	MsaT027853.1:CDS
CTCATTCTTCCTCAACAACA+AGG	0.601988	5:+53412126	None:intergenic
CCGTAGAATCTTCTTAAAGG+AGG	0.605275	5:+53413018	None:intergenic
TCTAACACAAGCAATCCGTT+CGG	0.605327	5:-53412377	MsaT027853.1:CDS
TGACCTTTGTGGTGTTAGGA+AGG	0.606748	5:+53412839	None:intergenic
TCCGTAGAATTAACTGAACC+AGG	0.607098	5:+53412535	None:intergenic
AATGGAATGAATGACCTTTG+TGG	0.614221	5:+53412828	None:intergenic
GTTAGATCATGGTTCAGACC+CGG	0.622519	5:+53412394	None:intergenic
GTGTGTTGTGAGGATCGACC+GGG	0.625955	5:-53412412	MsaT027853.1:CDS
GAGTCTTCCTCTTCATGCAG+CGG	0.627449	5:-53412562	MsaT027853.1:CDS
CTACGGAGGTAACTGAGACA+TGG	0.628854	5:-53412519	MsaT027853.1:CDS
AGAGTCATAGGGAAGCTGAA+AGG	0.630828	5:-53412909	MsaT027853.1:CDS
CCGGTTTCGCCAGAACCGAA+CGG	0.637182	5:+53412362	None:intergenic
AGGAATCAAAACGATACAGA+TGG	0.639848	5:+53414770	None:intergenic
GTAGAGAGGAAGGGGAACCA+CGG	0.640152	5:-53412450	MsaT027853.1:CDS
GAGTGGCCTAAAGGTGAAGG+TGG	0.645085	5:-53412286	MsaT027853.1:CDS
TCTTCCTCAACAACAAGGAA+CGG	0.645939	5:+53412131	None:intergenic
AGAGTGTTGTGGTGGTGGAG+TGG	0.646685	5:-53412303	MsaT027853.1:CDS
ACTGTCACTTTCATCCTCCG+TGG	0.656210	5:+53412433	None:intergenic
TAGGACAAAGAGTGTTGTGG+TGG	0.658865	5:-53412311	MsaT027853.1:CDS
GAGGCGACAGTGAGTTATTG+CGG	0.669787	5:-53412475	MsaT027853.1:CDS
GAGAGGAAGGGGAACCACGG+AGG	0.671020	5:-53412447	MsaT027853.1:CDS
AGGTAGGACAAAGAGTGTTG+TGG	0.684138	5:-53412314	MsaT027853.1:CDS
TGGTTCAGTTAATTCTACGG+AGG	0.696147	5:-53412533	MsaT027853.1:CDS
GGTTCGAGCTGAGATGATGA+CGG	0.696578	5:-53412341	MsaT027853.1:CDS
TCTCCTTCCTAACACCACAA+AGG	0.703951	5:-53412842	MsaT027853.1:intron
GAAAGTGACAGTGTGTTGTG+AGG	0.711096	5:-53412422	MsaT027853.1:CDS
GCGACAGTGAGTTATTGCGG+TGG	0.734204	5:-53412472	MsaT027853.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	53412114	53414796	53412114	ID=MsaG027853
Chr5	mRNA	53412114	53414796	53412114	ID=MsaT027853.1;Parent=MsaG027853
Chr5	exon	53412114	53412677	53412114	ID=MsaT027853.1.exon4;Parent=MsaT027853.1
Chr5	CDS	53412114	53412677	53412114	ID=cds.MsaT027853.1;Parent=MsaT027853.1
Chr5	exon	53412843	53413066	53412843	ID=MsaT027853.1.exon3;Parent=MsaT027853.1
Chr5	CDS	53412843	53413066	53412843	ID=cds.MsaT027853.1;Parent=MsaT027853.1
Chr5	exon	53413319	53413339	53413319	ID=MsaT027853.1.exon2;Parent=MsaT027853.1
Chr5	CDS	53413319	53413339	53413319	ID=cds.MsaT027853.1;Parent=MsaT027853.1
Chr5	exon	53414709	53414796	53414709	ID=MsaT027853.1.exon1;Parent=MsaT027853.1
Chr5	CDS	53414709	53414796	53414709	ID=cds.MsaT027853.1;Parent=MsaT027853.1

Gene Sequence

>MsaT027853.1

ATGGCCATCTGTATCGTTTTGATTCCTTCAACGAAAGCTGTCGGCGCCGACCAGAAAGGAAAGAATGAGATGAGACTATTAAGTAACAACATATGTACAAATATAACAGAACCAAGAAGAAAAAAGATCATGCTTCCTCCTTTAAGAAGATTCTACGGGTTTGAGAGCTGGATGGATAATAAAGACTATGAGGAAATCAACTGTGACAATTCAAAATCTGAGAGAAAATCAAAAGAAGCATGCAAGAGTCATAGGGAAGCTGAAAGGAGACGCAGACAGAGAATCAACGCTCATCTCAACACTCTTCGCTCTCTCCTTCCTAACACCACAAAGTCCGATAAGGCGTCGTTGTTAGCGGAAGTGGTGCAACACGTGAAACGGTCGAAGAAGGAAGCTGATGAAATGGCGAATCGTCGCAATGACGGAGAGTCTTCCTCTTCATGCAGCGGAGAACCTGGTTCAGTTAATTCTACGGAGGTAACTGAGACATGGCCTTTTCCGGGAGAATCAGACGAGGCGACAGTGAGTTATTGCGGTGGTAGAGAGGAAGGGGAACCACGGAGGATGAAAGTGACAGTGTGTTGTGAGGATCGACCGGGTCTGAACCATGATCTAACACAAGCAATCCGTTCGGTTCTGGCGAAACCGGTTCGAGCTGAGATGATGACGGTTGGAGGTAGGACAAAGAGTGTTGTGGTGGTGGAGTGGCCTAAAGGTGAAGGTGGTGATAATGGAAGAGAGGAGAAGGAGGTAGAAGCTTTGGAAAGGGGTTTGAAAGCTGTTATAGAGAATAGGGCTTTTGTGGATTCTGGGTTGGGCCCGATTTTGTTAGGCCGGAAACGGGCTCGTGAGGTTGACCGTTCCTTGTTGTTGAGGAAGAATGAGGACTTTTGCTAA

Protein sequence

>MsaT027853.1

MAICIVLIPSTKAVGADQKGKNEMRLLSNNICTNITEPRRKKIMLPPLRRFYGFESWMDNKDYEEINCDNSKSERKSKEACKSHREAERRRRQRINAHLNTLRSLLPNTTKSDKASLLAEVVQHVKRSKKEADEMANRRNDGESSSSCSGEPGSVNSTEVTETWPFPGESDEATVSYCGGREEGEPRRMKVTVCCEDRPGLNHDLTQAIRSVLAKPVRAEMMTVGGRTKSVVVVEWPKGEGGDNGREEKEVEALERGLKAVIENRAFVDSGLGPILLGRKRAREVDRSLLLRKNEDFC*