AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG028534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028534 MtrunA17_Chr5g0435211 83.696 92 11 2 6 96 132 220 8.96e-44 147
MsaG028534 MtrunA17_Chr7g0238671 74.444 90 19 2 6 94 130 216 4.10e-39 134
MsaG028534 MtrunA17_Chr3g0111631 72.222 90 21 2 6 94 133 219 5.13e-38 132
MsaG028534 MtrunA17_Chr2g0328171 71.111 90 22 2 6 94 131 217 1.17e-36 128
MsaG028534 MtrunA17_Chr2g0328211 53.719 121 35 3 6 108 118 235 3.22e-33 118
MsaG028534 MtrunA17_Chr3g0111591 60.638 94 33 2 6 98 110 200 2.48e-31 110
MsaG028534 MtrunA17_Chr4g0031561 65.556 90 27 2 6 94 150 236 5.70e-31 113
MsaG028534 MtrunA17_Chr4g0031541 60.000 90 32 2 6 94 139 225 6.90e-31 113
MsaG028534 MtrunA17_Chr3g0111581 57.143 105 41 2 6 109 126 227 2.61e-30 110
MsaG028534 MtrunA17_Chr5g0416311 64.444 90 26 3 6 94 133 217 6.22e-30 110
MsaG028534 MtrunA17_Chr4g0031591 59.551 89 32 2 7 94 150 235 1.12e-29 110
MsaG028534 MtrunA17_Chr4g0031571 61.111 90 31 2 6 94 152 238 4.20e-29 108
MsaG028534 MtrunA17_Chr7g0245571 62.222 90 28 3 6 94 145 229 4.38e-29 108
MsaG028534 MtrunA17_Chr2g0328191 58.763 97 33 4 6 99 39 131 5.99e-29 102
MsaG028534 MtrunA17_Chr2g0315141 63.333 90 28 3 7 94 77 163 3.99e-28 104
MsaG028534 MtrunA17_Chr4g0064201 61.957 92 28 3 6 96 168 253 8.84e-28 105
MsaG028534 MtrunA17_Chr6g0452761 62.637 91 26 4 6 94 190 274 1.70e-26 102
MsaG028534 MtrunA17_Chr3g0104091 60.440 91 29 4 6 94 110 195 2.27e-26 101
MsaG028534 MtrunA17_Chr8g0370461 56.667 90 35 2 6 94 149 235 2.48e-26 100
MsaG028534 MtrunA17_Chr3g0136421 60.000 90 30 3 6 94 136 220 2.58e-26 100
MsaG028534 MtrunA17_Chr5g0408941 57.778 90 31 3 6 94 146 229 2.59e-26 100
MsaG028534 MtrunA17_Chr8g0362661 62.637 91 26 4 6 94 191 275 6.72e-26 100
MsaG028534 MtrunA17_Chr1g0150741 60.000 90 30 3 6 94 136 220 8.25e-26 99.4
MsaG028534 MtrunA17_Chr5g0416011 61.538 91 27 4 6 94 193 277 9.46e-26 99.8
MsaG028534 MtrunA17_Chr5g0406841 54.444 90 37 2 6 94 203 289 1.23e-25 99.4
MsaG028534 MtrunA17_Chr6g0453001 58.242 91 31 4 6 94 111 196 2.63e-25 98.2
MsaG028534 MtrunA17_Chr8g0388941 58.889 90 31 3 6 94 125 209 3.10e-25 97.8
MsaG028534 MtrunA17_Chr7g0216551 57.778 90 31 4 7 94 181 265 6.95e-25 97.4
MsaG028534 MtrunA17_Chr4g0071481 53.125 96 41 2 6 100 178 270 1.46e-24 96.3
MsaG028534 MtrunA17_Chr5g0441021 55.556 90 34 3 6 94 127 211 5.09e-24 94.4
MsaG028534 MtrunA17_Chr3g0111551 53.933 89 37 2 7 94 117 202 5.21e-24 93.6
MsaG028534 MtrunA17_Chr2g0300711 59.551 89 30 3 7 94 134 217 7.60e-24 94.7
MsaG028534 MtrunA17_Chr5g0448661 50.549 91 41 2 5 94 156 243 9.45e-24 93.6
MsaG028534 MtrunA17_Chr8g0380441 54.444 90 35 3 6 94 127 211 1.23e-23 93.2
MsaG028534 MtrunA17_Chr8g0370571 54.444 90 36 3 7 94 113 199 1.71e-23 92.8
MsaG028534 MtrunA17_Chr3g0093381 55.556 90 34 3 6 94 165 249 2.32e-23 92.8
MsaG028534 MtrunA17_Chr3g0143951 53.333 90 35 3 6 94 139 222 2.85e-23 92.4
MsaG028534 MtrunA17_Chr4g0070411 56.667 90 33 3 6 94 139 223 5.24e-23 92.4
MsaG028534 MtrunA17_Chr4g0060531 55.556 90 35 3 6 94 139 224 2.16e-22 90.1
MsaG028534 MtrunA17_Chr8g0344141 52.222 90 37 3 6 94 133 217 5.06e-21 86.7
MsaG028534 MtrunA17_Chr2g0288121 46.667 90 43 3 7 94 91 177 7.83e-19 79.7
MsaG028534 MtrunA17_Chr4g0074651 51.111 90 39 3 7 94 172 258 4.34e-18 78.2
MsaG028534 MtrunA17_Chr2g0286281 51.648 91 37 4 7 94 138 224 6.93e-18 77.8
MsaG028534 MtrunA17_Chr5g0399981 47.872 94 39 4 6 94 117 205 7.40e-18 77.0
MsaG028534 MtrunA17_Chr1g0213991 51.648 91 37 4 7 94 146 232 1.29e-17 77.0
MsaG028534 MtrunA17_Chr3g0143961 50.575 87 38 3 10 94 119 202 1.37e-17 76.6
MsaG028534 MtrunA17_Chr2g0327471 51.648 91 37 4 7 94 140 226 1.45e-17 76.6
MsaG028534 MtrunA17_Chr5g0443691 51.136 88 36 4 10 94 152 235 2.64e-17 75.9
MsaG028534 MtrunA17_Chr2g0299301 48.889 90 41 3 7 94 1108 1194 4.92e-17 75.5
MsaG028534 MtrunA17_Chr8g0336581 43.158 95 43 4 6 94 129 218 5.62e-17 75.1
MsaG028534 MtrunA17_Chr2g0327511 51.724 87 35 4 11 94 161 243 7.30e-17 74.7
MsaG028534 MtrunA17_Chr8g0342071 41.818 110 54 4 7 114 498 599 9.22e-17 74.7
MsaG028534 MtrunA17_Chr8g0366991 48.889 90 38 4 7 94 520 603 3.03e-16 73.2
MsaG028534 MtrunA17_Chr7g0251771 46.667 90 43 3 7 94 100 186 3.42e-16 72.8
MsaG028534 MtrunA17_Chr7g0262521 46.667 90 43 3 7 94 395 481 3.70e-16 72.8
MsaG028534 MtrunA17_Chr1g0153851 45.455 88 42 3 10 94 100 184 3.89e-16 72.4
MsaG028534 MtrunA17_Chr4g0071221 46.154 91 43 3 7 94 587 674 4.65e-16 72.8
MsaG028534 MtrunA17_Chr4g0055301 46.316 95 40 4 6 94 122 211 1.07e-15 71.2
MsaG028534 MtrunA17_Chr8g0366981 48.889 90 38 4 7 94 351 434 1.13e-15 71.6
MsaG028534 MtrunA17_Chr7g0275131 49.451 91 39 4 7 94 122 208 1.15e-15 71.6
MsaG028534 MtrunA17_Chr4g0034931 42.222 90 47 3 7 94 188 274 1.41e-15 71.2
MsaG028534 MtrunA17_Chr5g0402071 43.333 90 46 3 7 94 215 301 1.84e-15 70.9
MsaG028534 MtrunA17_Chr8g0348451 42.222 90 47 3 7 94 192 278 2.19e-15 70.5
MsaG028534 MtrunA17_Chr3g0144551 43.333 90 46 3 7 94 182 268 2.44e-15 70.5
MsaG028534 MtrunA17_Chr1g0181821 51.136 88 36 4 10 94 126 209 4.31e-15 69.7
MsaG028534 MtrunA17_Chr7g0248491 42.222 90 47 3 7 94 209 295 7.65e-15 68.9
MsaG028534 MtrunA17_Chr1g0183041 44.444 90 45 3 7 94 400 486 7.66e-15 69.3
MsaG028534 MtrunA17_Chr1g0180951 44.681 94 41 4 7 94 143 231 9.45e-15 68.9
MsaG028534 MtrunA17_Chr7g0237401 50.549 91 38 4 7 94 142 228 1.21e-14 68.6
MsaG028534 MtrunA17_Chr2g0327541 47.059 85 42 2 11 94 166 248 1.26e-14 68.6
MsaG028534 MtrunA17_Chr8g0366931 46.667 90 40 4 7 94 75 158 1.41e-14 68.2
MsaG028534 MtrunA17_Chr7g0236881 43.478 92 47 3 5 94 661 749 1.68e-14 68.2
MsaG028534 MtrunA17_Chr2g0333091 40.000 90 49 3 7 94 539 625 2.22e-14 67.8
MsaG028534 MtrunA17_Chr3g0114851 45.055 91 42 4 7 95 570 654 2.96e-14 67.4
MsaG028534 MtrunA17_Chr2g0327531 48.276 87 38 4 11 94 96 178 3.41e-14 67.0
MsaG028534 MtrunA17_Chr7g0263521 48.864 88 38 4 10 94 125 208 4.45e-14 66.6
MsaG028534 MtrunA17_Chr8g0354651 41.935 93 42 4 22 114 175 255 4.67e-14 66.6
MsaG028534 MtrunA17_Chr8g0364671 42.391 92 44 4 7 94 111 197 9.08e-14 65.9
MsaG028534 MtrunA17_Chr3g0081011 42.857 91 46 4 6 94 387 473 9.44e-14 65.9
MsaG028534 MtrunA17_Chr2g0330471 43.182 88 40 5 11 94 459 540 9.87e-14 65.9
MsaG028534 MtrunA17_Chr2g0314611 41.111 90 48 3 7 94 532 618 1.09e-13 65.9
MsaG028534 MtrunA17_Chr8g0348661 40.000 90 46 4 7 94 533 616 1.30e-13 65.5
MsaG028534 MtrunA17_Chr3g0080881 44.944 89 41 4 7 94 121 202 1.53e-13 65.5
MsaG028534 MtrunA17_Chr5g0413511 47.222 72 32 3 24 94 125 191 2.17e-13 64.7
MsaG028534 MtrunA17_Chr5g0400701 44.444 90 43 4 7 94 757 841 2.19e-13 65.1
MsaG028534 MtrunA17_Chr8g0354331 40.659 91 48 4 6 94 148 234 2.21e-13 64.7
MsaG028534 MtrunA17_Chr5g0413981 42.391 92 44 4 7 94 114 200 3.16e-13 64.3
MsaG028534 MtrunA17_Chr3g0081001 41.758 91 47 4 6 94 391 477 3.64e-13 64.3
MsaG028534 MtrunA17_Chr1g0154331 42.391 92 47 4 5 94 86 173 3.82e-13 63.9
MsaG028534 MtrunA17_Chr3g0137741 40.000 90 49 3 7 94 539 625 3.82e-13 64.3
MsaG028534 MtrunA17_Chr2g0318191 38.889 90 50 3 7 94 62 148 4.03e-13 62.8
MsaG028534 MtrunA17_Chr2g0318171 40.000 90 49 3 7 94 528 614 4.45e-13 63.9
MsaG028534 MtrunA17_Chr4g0066761 42.697 89 47 2 7 94 121 206 4.59e-13 63.9
MsaG028534 MtrunA17_Chr8g0341881 46.667 75 31 4 23 94 470 538 4.66e-13 63.9
MsaG028534 MtrunA17_Chr3g0084431 42.222 90 46 4 7 94 543 628 4.68e-13 63.9
MsaG028534 MtrunA17_Chr1g0154311 42.222 90 46 4 7 94 400 485 7.78e-13 63.5
MsaG028534 MtrunA17_Chr4g0017241 45.161 93 39 5 7 94 538 623 8.45e-13 63.2
MsaG028534 MtrunA17_Chr1g0189791 39.252 107 60 3 7 111 120 223 8.65e-13 63.2
MsaG028534 MtrunA17_Chr7g0271451 38.889 90 50 3 7 94 243 329 8.73e-13 63.2
MsaG028534 MtrunA17_Chr8g0366971 47.126 87 38 4 10 94 128 208 9.51e-13 63.2
MsaG028534 MtrunA17_Chr2g0318811 42.222 90 46 4 7 94 549 634 1.08e-12 63.2
MsaG028534 MtrunA17_Chr1g0154351 42.391 92 47 4 5 94 405 492 1.11e-12 62.8
MsaG028534 MtrunA17_Chr7g0243401 42.553 94 46 5 7 96 474 563 1.20e-12 62.8
MsaG028534 MtrunA17_Chr1g0203631 43.333 90 46 3 7 94 1041 1127 1.22e-12 62.8
MsaG028534 MtrunA17_Chr1g0154371 42.222 90 46 4 7 94 405 490 1.27e-12 62.8
MsaG028534 MtrunA17_Chr3g0084661 41.111 90 48 3 7 94 81 167 1.43e-12 62.4
MsaG028534 MtrunA17_Chr5g0411631 43.956 91 44 4 7 94 644 730 1.62e-12 62.4
MsaG028534 MtrunA17_Chr4g0060011 38.835 103 45 5 7 101 363 455 1.74e-12 62.4
MsaG028534 MtrunA17_Chr3g0078551 42.045 88 45 4 9 94 575 658 2.67e-12 62.0
MsaG028534 MtrunA17_Chr7g0219751 38.889 90 48 4 7 94 7 91 3.11e-12 59.3
MsaG028534 MtrunA17_Chr4g0023071 38.889 90 47 4 7 94 543 626 3.18e-12 61.6
MsaG028534 MtrunA17_Chr3g0081031 43.333 90 45 4 7 94 401 486 3.34e-12 61.6
MsaG028534 MtrunA17_Chr5g0443121 42.391 92 48 3 7 96 231 319 3.43e-12 61.6
MsaG028534 MtrunA17_Chr7g0242201 38.889 90 50 3 7 94 92 178 3.46e-12 61.6
MsaG028534 MtrunA17_Chr4g0069051 58.696 46 18 1 6 50 35 80 3.71e-12 58.2
MsaG028534 MtrunA17_Chr4g0048631 42.045 88 45 4 9 94 583 666 3.72e-12 61.6
MsaG028534 MtrunA17_Chr2g0314991 41.111 90 48 3 7 94 259 345 3.96e-12 61.6
MsaG028534 MtrunA17_Chr2g0314991 40.217 92 50 3 7 96 1225 1313 6.29e-11 58.2
MsaG028534 MtrunA17_Chr3g0082941 39.560 91 49 4 6 94 221 307 4.34e-12 61.2
MsaG028534 MtrunA17_Chr3g0096351 41.111 90 48 3 7 94 229 315 4.41e-12 61.2
MsaG028534 MtrunA17_Chr2g0318841 42.222 90 46 4 7 94 550 635 4.91e-12 61.2
MsaG028534 MtrunA17_Chr2g0323301 38.043 92 52 3 7 96 542 630 5.02e-12 61.2
MsaG028534 MtrunA17_Chr3g0078521 41.573 89 46 4 8 94 569 653 5.12e-12 61.2
MsaG028534 MtrunA17_Chr5g0432871 38.889 90 48 4 7 94 664 748 6.09e-12 60.8
MsaG028534 MtrunA17_Chr7g0267441 37.363 91 51 4 7 94 646 733 6.27e-12 60.8
MsaG028534 MtrunA17_Chr8g0354441 38.462 91 50 4 6 94 398 484 6.52e-12 60.8
MsaG028534 MtrunA17_Chr4g0030471 40.000 90 43 4 7 94 135 215 6.78e-12 60.5
MsaG028534 MtrunA17_Chr3g0084421 41.111 90 47 4 7 94 511 596 7.08e-12 60.8
MsaG028534 MtrunA17_Chr7g0219651 42.222 90 45 4 7 94 1568 1652 7.49e-12 60.8
MsaG028534 MtrunA17_Chr4g0023221 40.000 90 48 4 7 94 779 864 7.81e-12 60.5
MsaG028534 MtrunA17_Chr5g0394021 43.182 88 42 4 9 94 374 455 8.44e-12 60.5
MsaG028534 MtrunA17_Chr8g0354421 38.462 91 50 4 6 94 411 497 8.58e-12 60.5
MsaG028534 MtrunA17_Chr2g0302631 40.000 90 49 3 7 94 232 318 8.87e-12 60.5
MsaG028534 MtrunA17_Chr7g0270121 43.478 92 45 3 7 94 428 516 9.05e-12 60.5
MsaG028534 MtrunA17_Chr2g0323231 37.778 90 50 4 7 94 227 312 9.10e-12 60.5
MsaG028534 MtrunA17_Chr3g0078541 41.573 89 46 4 8 94 580 664 1.02e-11 60.1
MsaG028534 MtrunA17_Chr4g0069251 38.889 90 50 3 7 94 227 313 1.02e-11 60.1
MsaG028534 MtrunA17_Chr2g0315081 39.130 92 51 3 7 96 702 790 1.06e-11 60.1
MsaG028534 MtrunA17_Chr3g0084681 41.111 90 47 4 7 94 513 598 1.22e-11 60.1
MsaG028534 MtrunA17_Chr2g0280681 40.659 91 48 4 6 94 549 635 1.26e-11 60.1
MsaG028534 MtrunA17_Chr2g0315151 38.889 90 50 3 7 94 714 800 1.27e-11 60.1
MsaG028534 MtrunA17_Chr3g0084451 41.111 90 47 4 7 94 555 640 1.27e-11 60.1
MsaG028534 MtrunA17_Chr8g0392271 38.462 91 50 4 7 94 627 714 1.59e-11 59.7
MsaG028534 MtrunA17_Chr4g0062911 40.659 91 46 5 7 94 395 480 1.61e-11 59.7
MsaG028534 MtrunA17_Chr2g0317071 39.175 97 54 3 7 101 842 935 1.62e-11 59.7
MsaG028534 MtrunA17_Chr7g0274661 42.222 90 44 4 7 94 422 505 1.69e-11 59.7
MsaG028534 MtrunA17_Chr2g0323341 41.111 90 47 4 7 94 456 541 1.85e-11 59.3
MsaG028534 MtrunA17_Chr4g0005801 38.889 90 49 4 7 94 240 325 1.96e-11 59.3
MsaG028534 MtrunA17_Chr7g0262141 40.000 90 49 3 7 94 763 849 2.12e-11 59.3
MsaG028534 MtrunA17_Chr2g0314961 37.778 90 51 3 7 94 204 290 2.21e-11 59.3
MsaG028534 MtrunA17_Chr7g0219581 41.111 90 46 4 7 94 7 91 2.40e-11 58.9
MsaG028534 MtrunA17_Chr8g0359651 37.234 94 50 4 7 94 711 801 2.47e-11 59.3
MsaG028534 MtrunA17_Chr1g0149711 38.889 90 49 4 7 94 137 222 2.86e-11 58.9
MsaG028534 MtrunA17_Chr1g0191631 40.000 90 49 3 7 94 199 285 2.90e-11 58.9
MsaG028534 MtrunA17_Chr8g0348841 35.556 90 52 4 7 94 491 576 3.17e-11 58.9
MsaG028534 MtrunA17_Chr3g0093161 41.111 90 43 5 9 94 548 631 3.59e-11 58.5
MsaG028534 MtrunA17_Chr2g0296591 37.255 102 54 4 7 101 995 1093 3.66e-11 58.5
MsaG028534 MtrunA17_Chr1g0206361 38.889 90 49 4 7 94 392 477 3.85e-11 58.5
MsaG028534 MtrunA17_Chr3g0108351 38.462 91 47 5 7 94 668 752 3.92e-11 58.5
MsaG028534 MtrunA17_Chr8g0345561 38.889 90 50 3 7 94 857 943 4.16e-11 58.5
MsaG028534 MtrunA17_Chr2g0296601 37.255 102 54 4 7 101 995 1093 4.31e-11 58.5
MsaG028534 MtrunA17_Chr8g0359691 40.230 87 47 3 10 94 715 798 4.34e-11 58.5
MsaG028534 MtrunA17_Chr7g0219571 42.222 90 45 4 7 94 583 667 4.35e-11 58.5
MsaG028534 MtrunA17_Chr4g0049551 36.364 110 57 5 7 114 410 508 4.46e-11 58.5
MsaG028534 MtrunA17_Chr2g0324931 38.889 90 48 4 7 94 742 826 4.60e-11 58.5
MsaG028534 MtrunA17_Chr3g0108361 40.000 90 47 4 7 94 670 754 4.91e-11 58.2
MsaG028534 MtrunA17_Chr3g0084441 41.111 90 47 4 7 94 555 640 5.00e-11 58.2
MsaG028534 MtrunA17_Chr4g0042441 36.667 90 51 4 7 94 549 634 5.30e-11 58.2
MsaG028534 MtrunA17_Chr7g0274651 42.222 90 44 4 7 94 419 502 5.80e-11 58.2
MsaG028534 MtrunA17_Chr2g0315061 38.889 90 50 3 7 94 85 171 6.10e-11 57.8
MsaG028534 MtrunA17_Chr2g0306811 38.144 97 48 5 7 94 150 243 6.20e-11 57.8
MsaG028534 MtrunA17_Chr6g0485761 46.479 71 30 4 26 94 363 427 6.52e-11 57.8
MsaG028534 MtrunA17_Chr4g0042421 37.778 90 50 4 7 94 553 638 6.57e-11 57.8
MsaG028534 MtrunA17_Chr4g0023111 41.111 90 47 4 7 94 763 848 6.60e-11 57.8
MsaG028534 MtrunA17_Chr4g0042401 37.079 89 51 3 7 94 553 637 6.96e-11 57.8
MsaG028534 MtrunA17_Chr3g0129391 40.659 91 47 4 7 94 923 1009 7.34e-11 57.8
MsaG028534 MtrunA17_Chr1g0206551 40.000 90 48 4 7 94 84 169 7.47e-11 57.8
MsaG028534 MtrunA17_Chr7g0236121 43.333 90 45 4 7 94 553 638 8.04e-11 57.8
MsaG028534 MtrunA17_Chr3g0140871 43.333 90 44 4 7 94 738 822 8.08e-11 57.8
MsaG028534 MtrunA17_Chr3g0084491 40.000 90 48 4 7 94 555 640 8.53e-11 57.8
MsaG028534 MtrunA17_Chr7g0221191 40.000 90 47 4 7 94 443 527 8.72e-11 57.4
MsaG028534 MtrunA17_Chr4g0049581 41.111 90 45 4 7 94 400 483 8.93e-11 57.4
MsaG028534 MtrunA17_Chr4g0048741 39.785 93 50 4 7 97 581 669 8.98e-11 57.4
MsaG028534 MtrunA17_Chr1g0194541 43.478 92 45 3 7 94 339 427 9.01e-11 57.4
MsaG028534 MtrunA17_Chr1g0206211 38.043 92 51 4 5 94 74 161 9.12e-11 56.2
MsaG028534 MtrunA17_Chr7g0236201 43.333 90 45 4 7 94 519 604 9.28e-11 57.4
MsaG028534 MtrunA17_Chr8g0358821 38.889 90 47 4 7 94 738 821 9.65e-11 57.4
MsaG028534 MtrunA17_Chr4g0042351 36.667 90 51 4 7 94 502 587 9.73e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028534 AT2G28930.2 70.000 90 23 2 6 94 126 212 4.13e-36 127
MsaG028534 AT2G28930.3 70.000 90 23 2 6 94 129 215 4.50e-36 127
MsaG028534 AT2G28930.1 70.000 90 23 2 6 94 137 223 4.55e-36 127
MsaG028534 AT1G07570.4 67.778 90 25 2 6 94 9 95 1.14e-34 121
MsaG028534 AT1G07570.1 67.778 90 25 2 6 94 125 211 1.05e-33 120
MsaG028534 AT1G07570.5 67.778 90 25 2 6 94 125 211 1.05e-33 120
MsaG028534 AT1G07570.2 67.778 90 25 2 6 94 125 211 1.05e-33 120
MsaG028534 AT1G07570.3 67.778 90 25 2 6 94 136 222 1.67e-33 120
MsaG028534 AT5G02290.2 62.222 90 30 2 6 94 125 211 8.82e-33 118
MsaG028534 AT5G02290.1 62.222 90 30 2 6 94 125 211 8.82e-33 118
MsaG028534 AT2G39660.1 66.667 90 26 2 6 94 124 210 1.65e-32 117
MsaG028534 AT2G02800.1 62.222 90 28 3 6 94 140 224 3.88e-29 108
MsaG028534 AT2G02800.2 62.222 90 28 3 6 94 140 224 3.88e-29 108
MsaG028534 AT5G01020.1 63.333 90 27 3 6 94 123 207 5.78e-29 108
MsaG028534 AT2G17220.2 58.889 90 33 2 6 94 141 227 2.37e-28 106
MsaG028534 AT2G17220.1 58.889 90 33 2 6 94 142 228 2.44e-28 106
MsaG028534 AT3G55450.1 63.736 91 28 3 6 94 118 205 4.38e-28 105
MsaG028534 AT3G55450.2 63.736 91 28 3 6 94 155 242 5.02e-28 105
MsaG028534 AT1G14370.1 61.111 90 29 3 6 94 143 227 7.56e-28 105
MsaG028534 AT3G01300.1 62.637 91 26 4 6 94 193 277 1.83e-26 102
MsaG028534 AT5G15080.1 61.538 91 27 4 6 94 199 283 5.79e-26 100
MsaG028534 AT5G56460.1 56.667 90 33 3 6 94 133 217 1.33e-25 99.4
MsaG028534 AT3G28690.1 59.341 91 29 4 6 94 83 167 2.29e-25 98.2
MsaG028534 AT1G74490.1 58.889 90 31 3 6 94 142 226 2.69e-25 98.2
MsaG028534 AT3G28690.3 59.341 91 29 4 6 94 132 216 3.29e-25 98.2
MsaG028534 AT3G28690.2 59.341 91 29 4 6 94 183 267 3.47e-25 98.6
MsaG028534 AT1G61590.1 55.556 90 34 3 6 94 153 237 5.60e-25 97.8
MsaG028534 AT2G07180.1 56.667 90 33 3 6 94 144 228 4.18e-24 95.5
MsaG028534 AT2G07180.2 56.667 90 33 3 6 94 144 228 4.18e-24 95.5
MsaG028534 AT1G69790.2 57.143 91 31 4 5 94 129 212 1.92e-23 93.2
MsaG028534 AT1G69790.1 57.143 91 31 4 5 94 140 223 2.16e-23 93.2
MsaG028534 AT2G26290.1 55.556 90 34 3 6 94 142 226 2.39e-23 93.2
MsaG028534 AT1G26970.2 56.667 90 30 4 7 94 26 108 4.49e-23 90.9
MsaG028534 AT2G05940.1 56.667 90 33 3 6 94 141 225 9.47e-23 91.7
MsaG028534 AT1G26970.1 56.667 90 30 4 7 94 141 223 1.52e-22 90.9
MsaG028534 AT5G35580.1 52.809 89 36 3 7 94 131 214 3.83e-21 87.4
MsaG028534 AT5G35580.2 52.809 89 36 3 7 94 143 226 4.03e-21 87.4
MsaG028534 AT4G35600.2 52.222 90 36 3 6 94 144 227 6.89e-21 86.3
MsaG028534 AT4G35600.1 52.222 90 36 3 6 94 143 226 6.93e-21 86.3
MsaG028534 AT1G76360.1 50.000 90 39 3 6 94 220 304 7.63e-21 86.7
MsaG028534 AT1G72540.1 50.562 89 38 3 7 94 139 222 1.30e-19 82.8
MsaG028534 AT1G20650.1 48.889 90 41 3 7 94 126 212 5.32e-18 78.2
MsaG028534 AT5G16500.1 46.667 90 43 3 7 94 123 209 8.43e-18 77.8
MsaG028534 AT3G02810.1 48.352 91 40 4 7 94 113 199 2.61e-17 76.6
MsaG028534 AT5G56890.1 46.667 90 43 3 7 94 771 857 2.80e-17 76.6
MsaG028534 AT5G13160.1 50.549 91 38 4 7 94 135 221 5.67e-17 75.5
MsaG028534 AT5G18610.1 50.549 91 38 4 7 94 132 218 7.34e-17 75.1
MsaG028534 AT5G18610.2 50.549 91 38 4 7 94 132 218 7.34e-17 75.1
MsaG028534 AT5G18610.3 50.549 91 38 4 7 94 132 218 7.34e-17 75.1
MsaG028534 AT1G61860.1 48.864 88 40 3 11 96 138 222 7.89e-17 75.1
MsaG028534 AT4G17660.1 46.154 91 41 4 5 94 146 229 1.28e-16 74.3
MsaG028534 AT4G13190.5 47.826 92 43 3 5 94 29 117 1.53e-16 73.6
MsaG028534 AT4G13190.4 47.826 92 43 3 5 94 118 206 2.02e-16 73.2
MsaG028534 AT2G28590.2 50.000 86 38 3 11 94 151 233 2.25e-16 73.2
MsaG028534 AT2G28590.1 50.000 86 38 3 11 94 151 233 2.98e-16 73.6
MsaG028534 AT4G13190.1 47.826 92 43 3 5 94 118 206 3.15e-16 73.2
MsaG028534 AT5G02800.1 50.575 87 38 3 10 94 125 208 4.27e-16 72.8
MsaG028534 AT1G07870.1 48.837 86 39 3 11 94 156 238 4.53e-16 72.8
MsaG028534 AT1G07870.2 49.412 85 38 3 12 94 157 238 5.17e-16 72.8
MsaG028534 AT3G20530.2 48.352 91 41 4 7 94 131 218 1.14e-15 71.2
MsaG028534 AT4G32300.1 43.333 90 46 3 7 94 540 626 1.28e-15 71.6
MsaG028534 AT3G20530.1 48.352 91 41 4 7 94 131 218 1.69e-15 71.2
MsaG028534 AT5G47070.1 44.681 94 40 4 6 94 140 226 1.75e-15 71.2
MsaG028534 AT4G34500.1 43.478 92 45 3 7 94 193 281 1.78e-15 71.2
MsaG028534 AT1G76370.1 46.667 90 43 3 7 94 123 209 2.14e-15 70.9
MsaG028534 AT3G24790.2 49.451 91 39 4 7 94 114 200 2.76e-15 70.5
MsaG028534 AT3G24790.1 49.451 91 39 4 7 94 96 182 2.91e-15 70.5
MsaG028534 AT1G24030.5 43.478 92 43 4 7 94 113 199 3.89e-15 69.3
MsaG028534 AT1G24030.6 43.478 92 43 4 7 94 22 108 3.98e-15 69.3
MsaG028534 AT3G26940.1 45.556 90 44 3 7 94 122 208 4.02e-15 70.1
MsaG028534 AT1G24030.3 43.478 92 43 4 7 94 59 145 4.74e-15 69.7
MsaG028534 AT1G24030.4 43.478 92 43 4 7 94 113 199 6.18e-15 68.9
MsaG028534 AT1G24030.1 43.478 92 43 4 7 94 127 213 7.08e-15 69.3
MsaG028534 AT5G07280.1 43.333 90 46 3 7 94 965 1051 8.31e-15 69.3
MsaG028534 AT1G24030.2 43.478 92 43 4 7 94 113 199 8.35e-15 69.3
MsaG028534 AT3G09780.1 43.333 90 43 4 7 94 570 653 9.61e-15 69.3
MsaG028534 AT4G02630.1 41.758 91 47 4 7 94 210 297 1.57e-14 68.6
MsaG028534 AT1G01540.1 41.111 90 48 3 7 94 202 288 1.68e-14 68.6
MsaG028534 AT5G62710.2 45.556 90 44 3 7 94 326 412 1.77e-14 68.6
MsaG028534 AT5G62710.1 45.556 90 44 3 7 94 360 446 1.80e-14 68.6
MsaG028534 AT1G01540.2 41.111 90 48 3 7 94 202 288 2.01e-14 68.2
MsaG028534 AT2G39110.1 45.745 94 41 5 7 94 144 233 3.35e-14 67.8
MsaG028534 AT2G39110.2 45.745 94 41 5 7 94 129 218 4.22e-14 67.4
MsaG028534 AT5G42440.1 41.758 91 45 3 7 94 129 214 4.33e-14 67.0
MsaG028534 AT4G21410.2 45.556 90 43 4 7 94 405 490 1.10e-13 66.2
MsaG028534 AT4G21410.1 45.556 90 43 4 7 94 280 365 1.11e-13 66.2
MsaG028534 AT4G21410.3 45.556 90 43 4 7 94 405 490 1.13e-13 66.2
MsaG028534 AT3G07070.1 48.611 72 31 3 25 94 147 214 1.61e-13 65.5
MsaG028534 AT5G48740.1 42.391 92 48 3 5 94 652 740 7.54e-13 63.9
MsaG028534 AT3G09830.2 41.053 95 45 5 6 94 137 226 8.08e-13 63.5
MsaG028534 AT3G09830.3 41.053 95 45 5 6 94 137 226 8.08e-13 63.5
MsaG028534 AT3G09830.1 41.053 95 45 5 6 94 137 226 8.08e-13 63.5
MsaG028534 AT5G53890.1 41.237 97 52 3 7 101 802 895 8.47e-13 63.9
MsaG028534 AT1G56140.1 44.828 87 41 4 10 94 744 825 8.55e-13 63.5
MsaG028534 AT2G19130.1 41.304 92 46 5 7 94 540 627 9.64e-13 63.5
MsaG028534 AT3G09010.1 40.000 90 49 3 7 94 94 180 1.49e-12 62.8
MsaG028534 AT4G03230.3 42.222 90 46 4 7 94 573 658 1.66e-12 62.8
MsaG028534 AT4G03230.8 42.222 90 46 4 7 94 580 665 1.66e-12 62.8
MsaG028534 AT4G03230.7 42.222 90 46 4 7 94 581 666 1.66e-12 62.8
MsaG028534 AT4G03230.2 42.222 90 46 4 7 94 638 723 1.67e-12 62.8
MsaG028534 AT4G03230.6 42.222 90 46 4 7 94 638 723 1.67e-12 62.8
MsaG028534 AT4G03230.5 42.222 90 46 4 7 94 666 751 1.68e-12 62.8
MsaG028534 AT4G03230.4 42.222 90 46 4 7 94 738 823 1.68e-12 62.8
MsaG028534 AT4G03230.1 42.222 90 46 4 7 94 738 823 1.68e-12 62.8
MsaG028534 AT1G11300.2 44.565 92 41 5 7 94 542 627 1.74e-12 62.8
MsaG028534 AT1G11300.1 44.565 92 41 5 7 94 557 642 1.74e-12 62.8
MsaG028534 AT5G37450.4 41.111 90 46 4 7 94 476 560 1.83e-12 62.8
MsaG028534 AT4G01330.1 38.889 90 50 3 7 94 210 296 1.88e-12 62.8
MsaG028534 AT4G01330.2 38.889 90 50 3 7 94 210 296 1.88e-12 62.8
MsaG028534 AT3G09010.2 40.000 90 49 3 7 94 94 180 1.90e-12 62.4
MsaG028534 AT4G21380.1 41.111 90 47 4 7 94 574 659 1.98e-12 62.8
MsaG028534 AT3G58690.1 39.796 98 44 4 1 94 138 224 2.28e-12 62.4
MsaG028534 AT1G29730.3 43.678 87 42 4 10 94 724 805 2.75e-12 62.4
MsaG028534 AT1G56120.2 45.882 85 39 4 12 94 745 824 3.14e-12 62.0
MsaG028534 AT1G56120.1 45.882 85 39 4 12 94 763 842 3.17e-12 62.0
MsaG028534 AT1G56120.3 45.882 85 39 4 12 94 597 676 3.46e-12 62.0
MsaG028534 AT4G04570.3 41.111 90 47 4 7 94 232 317 3.92e-12 61.6
MsaG028534 AT1G16760.1 34.862 109 60 5 7 114 497 595 4.03e-12 61.6
MsaG028534 AT1G16760.2 34.862 109 60 5 7 114 497 595 4.11e-12 61.6
MsaG028534 AT5G47850.1 43.333 90 44 4 7 94 503 587 4.18e-12 61.6
MsaG028534 AT1G29730.2 43.678 87 42 4 10 94 724 805 4.32e-12 61.6
MsaG028534 AT4G01330.3 38.889 90 50 3 7 94 210 296 4.56e-12 61.6
MsaG028534 AT5G54590.3 40.000 90 47 4 7 94 161 245 4.67e-12 61.6
MsaG028534 AT5G54590.4 40.000 90 47 4 7 94 161 245 4.67e-12 61.6
MsaG028534 AT5G54590.2 40.000 90 47 4 7 94 161 245 4.67e-12 61.6
MsaG028534 AT1G29740.2 44.828 87 41 4 10 94 728 809 4.67e-12 61.6
MsaG028534 AT4G02010.1 44.565 92 44 3 7 94 428 516 4.78e-12 61.6
MsaG028534 AT1G29730.4 43.678 87 43 4 10 94 691 773 4.96e-12 61.6
MsaG028534 AT5G24080.3 36.667 90 52 3 7 94 451 537 5.03e-12 61.6
MsaG028534 AT5G24080.1 36.667 90 52 3 7 94 451 537 5.03e-12 61.6
MsaG028534 AT5G38990.1 40.659 91 48 4 7 94 574 661 5.10e-12 61.6
MsaG028534 AT1G29740.1 44.828 87 41 4 10 94 728 809 5.27e-12 61.6
MsaG028534 AT5G39000.1 40.659 91 48 4 7 94 567 654 6.07e-12 61.2
MsaG028534 AT5G24080.2 36.667 90 52 3 7 94 578 664 6.37e-12 61.2
MsaG028534 AT1G29730.1 43.678 87 43 4 10 94 691 773 6.41e-12 61.2
MsaG028534 AT1G53430.2 41.111 90 48 3 7 94 676 762 6.62e-12 61.2
MsaG028534 AT1G53430.1 41.111 90 48 3 7 94 717 803 6.63e-12 61.2
MsaG028534 AT3G18810.1 47.143 70 31 3 26 94 405 469 6.89e-12 61.2
MsaG028534 AT1G49270.1 40.000 90 43 4 26 114 405 484 7.82e-12 60.8
MsaG028534 AT2G02220.1 40.206 97 53 3 7 101 782 875 7.89e-12 60.8
MsaG028534 AT1G56130.2 43.529 85 41 4 12 94 747 826 8.62e-12 60.8
MsaG028534 AT1G56130.1 43.529 85 41 4 12 94 599 678 9.40e-12 60.8
MsaG028534 AT1G56145.1 41.111 90 46 4 7 94 735 819 9.49e-12 60.8
MsaG028534 AT1G56130.3 43.529 85 41 4 12 94 548 627 9.82e-12 60.8
MsaG028534 AT4G04570.2 41.111 90 47 4 7 94 396 481 9.85e-12 60.5
MsaG028534 AT2G26730.1 39.130 92 48 5 7 95 398 484 9.90e-12 60.5
MsaG028534 AT4G04570.1 41.111 90 47 4 7 94 396 481 1.06e-11 60.5
MsaG028534 AT1G56145.3 42.529 87 43 4 10 94 635 716 1.11e-11 60.5
MsaG028534 AT5G37450.1 41.111 90 46 4 7 94 655 739 1.13e-11 60.5
MsaG028534 AT4G04540.3 41.111 90 47 4 7 94 401 486 1.16e-11 60.5
MsaG028534 AT5G25930.1 39.362 94 48 5 7 94 737 827 1.16e-11 60.5
MsaG028534 AT4G04540.2 41.111 90 47 4 7 94 401 486 1.18e-11 60.5
MsaG028534 AT4G04540.4 41.111 90 47 4 7 94 372 457 1.19e-11 60.5
MsaG028534 AT4G04540.1 41.111 90 47 4 7 94 401 486 1.19e-11 60.5
MsaG028534 AT5G37450.3 41.111 90 46 4 7 94 679 763 1.26e-11 60.5
MsaG028534 AT5G37450.2 41.111 90 46 4 7 94 703 787 1.34e-11 60.5
MsaG028534 AT4G38830.1 44.444 90 44 4 7 94 392 477 1.43e-11 60.1
MsaG028534 AT1G52290.1 49.296 71 28 4 26 94 211 275 1.47e-11 60.1
MsaG028534 AT3G28040.1 42.857 91 45 4 7 94 776 862 1.50e-11 60.1
MsaG028534 AT1G25320.1 36.957 92 51 4 7 94 453 541 1.53e-11 60.1
MsaG028534 AT1G34300.1 41.111 90 47 4 7 94 531 616 1.72e-11 60.1
MsaG028534 AT4G39400.1 39.560 91 48 4 7 94 931 1017 2.02e-11 59.7
MsaG028534 AT1G30570.1 41.758 91 44 5 7 94 568 652 2.08e-11 59.7
MsaG028534 AT2G32800.1 36.697 109 61 4 7 110 167 272 2.08e-11 59.7
MsaG028534 AT5G56790.1 42.045 88 41 5 11 94 442 523 2.31e-11 59.7
MsaG028534 AT1G53440.1 42.222 90 47 3 7 94 715 801 2.41e-11 59.7
MsaG028534 AT5G16590.1 38.462 91 49 4 7 94 390 476 2.45e-11 59.7
MsaG028534 AT5G15730.1 41.111 90 45 4 7 94 162 245 2.62e-11 59.3
MsaG028534 AT4G04500.2 40.000 90 48 4 7 94 393 478 2.77e-11 59.3
MsaG028534 AT4G04500.3 40.000 90 48 4 7 94 393 478 2.77e-11 59.3
MsaG028534 AT3G14840.2 38.889 90 50 3 7 94 720 806 2.82e-11 59.3
MsaG028534 AT1G11330.3 42.222 90 46 4 7 94 572 657 3.72e-11 58.9
MsaG028534 AT4G04500.1 40.000 90 48 4 7 94 393 478 3.81e-11 58.9
MsaG028534 AT1G11330.1 42.222 90 46 4 7 94 570 655 4.02e-11 58.9
MsaG028534 AT1G11330.2 42.222 90 46 4 7 94 572 657 4.38e-11 58.9
MsaG028534 AT3G13690.2 40.909 88 42 5 11 94 463 544 4.65e-11 58.9
MsaG028534 AT3G13690.1 40.909 88 42 5 11 94 463 544 4.65e-11 58.9
MsaG028534 AT3G13690.3 40.909 88 42 5 11 94 463 544 4.65e-11 58.9
MsaG028534 AT1G70460.1 42.466 73 34 4 24 94 419 485 4.76e-11 58.5
MsaG028534 AT4G23180.3 43.333 90 45 4 7 94 396 481 4.96e-11 58.5
MsaG028534 AT3G17420.1 38.889 90 50 3 7 94 202 288 5.19e-11 58.5
MsaG028534 AT4G04510.2 38.889 90 49 4 7 94 389 474 5.20e-11 58.5
MsaG028534 AT5G40380.2 41.111 90 47 4 7 94 363 448 5.21e-11 58.5
MsaG028534 AT4G04510.1 38.889 90 49 4 7 94 387 472 5.36e-11 58.5
MsaG028534 AT5G40380.3 41.111 90 47 4 7 94 363 448 5.47e-11 58.5
MsaG028534 AT2G35620.3 40.000 90 46 4 7 94 352 435 5.51e-11 58.5
MsaG028534 AT2G35620.1 40.000 90 46 4 7 94 352 435 5.51e-11 58.5
MsaG028534 AT2G35620.2 40.000 90 46 4 7 94 352 435 5.51e-11 58.5
MsaG028534 AT2G35620.4 40.000 90 46 4 7 94 352 435 5.51e-11 58.5
MsaG028534 AT1G11340.1 38.889 90 49 4 7 94 563 648 5.53e-11 58.5
MsaG028534 AT1G52290.2 40.659 91 43 4 26 115 211 291 5.54e-11 58.5
MsaG028534 AT1G11280.2 42.222 90 46 4 7 94 553 638 5.74e-11 58.5
MsaG028534 AT1G11280.1 42.222 90 46 4 7 94 563 648 5.80e-11 58.5
MsaG028534 AT1G56720.3 38.889 90 50 3 7 94 227 313 5.82e-11 58.5
MsaG028534 AT1G56720.1 38.889 90 50 3 7 94 227 313 5.82e-11 58.5
MsaG028534 AT1G56720.2 38.889 90 50 3 7 94 227 313 5.82e-11 58.5
MsaG028534 AT1G56720.4 38.889 90 50 3 7 94 227 313 5.82e-11 58.5
MsaG028534 AT1G11280.3 42.222 90 46 4 7 94 541 626 5.85e-11 58.5
MsaG028534 AT1G11280.4 42.222 90 46 4 7 94 551 636 5.97e-11 58.5
MsaG028534 AT4G32710.1 40.659 91 45 5 7 94 437 521 6.33e-11 58.5
MsaG028534 AT5G40380.1 41.111 90 47 4 7 94 363 448 6.44e-11 58.2
MsaG028534 AT2G30940.3 37.778 90 51 3 7 94 212 298 6.52e-11 58.2
MsaG028534 AT1G11280.5 42.222 90 46 4 7 94 553 638 6.53e-11 58.2
MsaG028534 AT2G30940.2 37.778 90 51 3 7 94 215 301 7.05e-11 58.2
MsaG028534 AT2G30940.1 37.778 90 51 3 7 94 215 301 7.18e-11 58.2
MsaG028534 AT1G11303.1 42.391 92 43 5 7 94 557 642 7.39e-11 58.2
MsaG028534 AT5G18500.2 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT5G18500.5 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT5G18500.4 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT5G18500.1 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT5G18500.3 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT5G18500.6 36.667 90 52 3 7 94 214 300 8.00e-11 58.2
MsaG028534 AT1G09970.1 44.444 90 43 4 7 94 729 813 8.66e-11 58.2
MsaG028534 AT1G09970.2 44.444 90 43 4 7 94 729 813 8.66e-11 58.2
MsaG028534 AT1G34210.1 44.286 70 35 2 26 94 374 440 8.84e-11 57.8
MsaG028534 AT1G34210.2 44.286 70 35 2 26 94 374 440 8.84e-11 57.8
MsaG028534 AT4G22130.1 40.659 91 47 4 7 94 445 531 8.86e-11 57.8
MsaG028534 AT1G18390.1 40.000 90 47 3 7 94 386 470 9.13e-11 57.8
MsaG028534 AT3G24550.1 46.479 71 30 4 26 94 348 412 9.50e-11 57.8
MsaG028534 AT4G22130.2 40.659 91 47 4 7 94 304 390 9.53e-11 57.8
MsaG028534 AT5G35370.1 40.659 91 47 4 7 95 563 648 9.84e-11 57.8

Find 20 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACAATTCAATTGTAAAA+TGG 0.141757 5:-63629664 MsaT028534.1:CDS
AATGAAATGTCCATATTATC+TGG 0.247416 5:-63630060 MsaT028534.1:CDS
TCAAGATGAACATCGGCTTT+TGG 0.336355 5:-63629994 MsaT028534.1:CDS
TTACAATTCAATTGTAAAAT+GGG 0.367919 5:-63629663 MsaT028534.1:CDS
TGCAGCTGTCCCAGATAATA+TGG 0.374593 5:+63630050 None:intergenic
CCGTCGGTTTCACAAGATTA+GGG 0.396224 5:+63630024 None:intergenic
GTGATTGTCCAAACTGCCTT+TGG 0.419097 5:+63629956 None:intergenic
GGTTGCTCTTGGTGCTGCTA+AGG 0.428686 5:-63629792 MsaT028534.1:CDS
ACCGTCGGTTTCACAAGATT+AGG 0.447962 5:+63630023 None:intergenic
CACCAAGAGCAACCTTCATT+CGG 0.466111 5:+63629801 None:intergenic
TTCTTGGAGCATCCGAATGA+AGG 0.477851 5:-63629813 MsaT028534.1:CDS
GGTGCTGCTAAGGGTCTCCT+TGG 0.489190 5:-63629782 MsaT028534.1:CDS
GTTGCTCTTGGTGCTGCTAA+GGG 0.501254 5:-63629791 MsaT028534.1:CDS
ATGAAATGTCCATATTATCT+GGG 0.518641 5:-63630059 MsaT028534.1:CDS
ATCCGAATGAAGGTTGCTCT+TGG 0.527033 5:-63629803 MsaT028534.1:CDS
ATTCGGATGCTCCAAGAAAG+TGG 0.553294 5:+63629818 None:intergenic
CCCTAATCTTGTGAAACCGA+CGG 0.630365 5:-63630024 MsaT028534.1:CDS
TCATCTTGAGTAGTAACCGT+CGG 0.645099 5:+63630008 None:intergenic
TTACTACTCAAGATGAACAT+CGG 0.675242 5:-63630001 MsaT028534.1:CDS
TGTGAAGATATGCAAGACCA+AGG 0.686717 5:+63629765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 63629646 63630081 63629646 ID=MsaG028534
Chr5 mRNA 63629646 63630081 63629646 ID=MsaT028534.1;Parent=MsaG028534
Chr5 exon 63629646 63629857 63629646 ID=MsaT028534.1.exon2;Parent=MsaT028534.1
Chr5 CDS 63629646 63629857 63629646 ID=cds.MsaT028534.1;Parent=MsaT028534.1
Chr5 exon 63629946 63630081 63629946 ID=MsaT028534.1.exon1;Parent=MsaT028534.1
Chr5 CDS 63629946 63630081 63629946 ID=cds.MsaT028534.1;Parent=MsaT028534.1
Gene Sequence

>MsaT028534.1

ATGAAATGTCCATATTATCTGGGACAGCTGCAACACCCTAATCTTGTGAAACCGACGGTTACTACTCAAGATGAACATCGGCTTTTGGTTTACGAGTTTTTAACCAAAGGCAGTTTGGACAATCACTTATTTAGAAGAGCTTCTTATTTTCAACCACTTTCTTGGAGCATCCGAATGAAGGTTGCTCTTGGTGCTGCTAAGGGTCTCCTTGGTCTTGCATATCTTCACAGCGACGAAGCAAAAGTGATATATCCCGACTTTAAAACTTCAAATATAGTGCTTTACACAGTAAGTAAATCTCATTGCTATTACAATTCAATTGTAAAATGGGCTCTTATGAGAAACTGA
Protein sequence

>MsaT028534.1

MKCPYYLGQLQHPNLVKPTVTTQDEHRLLVYEFLTKGSLDNHLFRRASYFQPLSWSIRMKVALGAAKGLLGLAYLHSDEAKVIYPDFKTSNIVLYTVSKSHCYYNSIVKWALMRN*