AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG028568

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028568 MtrunA17_Chr5g0432161 96.364 550 14 5 1 547 36 582 0.0 1077
MsaG028568 MtrunA17_Chr3g0106491 55.712 569 164 21 2 546 3 507 6.07e-173 498
MsaG028568 MtrunA17_Chr7g0243891 47.610 544 226 17 25 546 35 541 3.15e-138 411
MsaG028568 MtrunA17_Chr4g0004911 48.276 406 151 14 48 447 47 399 2.68e-104 322
MsaG028568 MtrunA17_Chr3g0079691 43.617 470 177 13 47 448 110 559 1.77e-95 305
MsaG028568 MtrunA17_Chr3g0079691 54.118 85 37 2 384 467 280 363 1.08e-17 86.7
MsaG028568 MtrunA17_Chr3g0079691 53.425 73 32 2 207 278 495 566 5.98e-15 78.2
MsaG028568 MtrunA17_Chr5g0445311 43.478 437 199 12 26 448 26 428 1.61e-93 296
MsaG028568 MtrunA17_Chr5g0445311 50.649 77 24 2 384 460 200 262 3.31e-15 78.6
MsaG028568 MtrunA17_Chr3g0101131 40.430 465 197 14 28 446 47 477 9.38e-88 282
MsaG028568 MtrunA17_Chr3g0101131 42.056 107 47 3 384 490 243 334 9.31e-16 80.5
MsaG028568 MtrunA17_Chr7g0218081 39.836 487 213 13 2 461 53 486 8.75e-85 272
MsaG028568 MtrunA17_Chr5g0418191 50.365 274 116 8 186 453 129 388 6.48e-79 254
MsaG028568 MtrunA17_Chr5g0418191 45.918 98 49 3 207 302 320 415 1.78e-15 79.0
MsaG028568 MtrunA17_Chr7g0249311 50.175 285 96 4 203 446 175 454 3.29e-78 259
MsaG028568 MtrunA17_Chr7g0249311 59.701 67 26 1 384 450 179 244 7.56e-17 84.0
MsaG028568 MtrunA17_Chr7g0249311 46.078 102 44 4 207 298 392 492 1.08e-15 80.5
MsaG028568 MtrunA17_Chr7g0263531 48.438 256 105 6 199 443 181 420 7.41e-75 244
MsaG028568 MtrunA17_Chr4g0042831 47.529 263 91 6 192 453 130 346 3.90e-70 230
MsaG028568 MtrunA17_Chr5g0447701 42.578 256 130 4 192 447 77 315 1.56e-53 186
MsaG028568 MtrunA17_Chr4g0074001 39.113 248 133 5 206 446 185 421 1.10e-45 168
MsaG028568 MtrunA17_Chr7g0249301 80.488 82 16 0 365 446 273 354 4.79e-42 155
MsaG028568 MtrunA17_Chr7g0249301 66.667 72 24 0 208 279 63 134 2.97e-25 107
MsaG028568 MtrunA17_Chr7g0249301 47.222 108 50 5 383 486 61 165 3.41e-16 80.5
MsaG028568 MtrunA17_Chr7g0249301 56.667 60 25 1 207 265 292 351 2.60e-14 74.7
MsaG028568 MtrunA17_Chr5g0447711 34.167 240 128 5 208 447 84 293 1.35e-36 138
MsaG028568 MtrunA17_Chr5g0432071 48.936 141 66 3 177 316 76 211 5.62e-36 133
MsaG028568 MtrunA17_Chr5g0432071 50.000 78 35 2 384 458 104 180 8.27e-17 79.3
MsaG028568 MtrunA17_Chr8g0335811 60.870 92 34 1 349 440 121 210 2.40e-33 126
MsaG028568 MtrunA17_Chr8g0335811 58.621 58 23 1 207 263 154 211 1.61e-15 76.3
MsaG028568 MtrunA17_Chr1g0188941 67.089 79 26 0 365 443 32 110 2.59e-33 122
MsaG028568 MtrunA17_Chr1g0188941 45.122 82 43 2 186 265 29 110 6.43e-17 77.0
MsaG028568 MtrunA17_Chr3g0129361 66.216 74 25 0 367 440 127 200 1.15e-29 116
MsaG028568 MtrunA17_Chr3g0129361 55.172 58 25 1 207 263 144 201 1.13e-14 73.6
MsaG028568 MtrunA17_Chr8g0383351 65.333 75 25 1 367 440 142 216 3.08e-28 112
MsaG028568 MtrunA17_Chr8g0383351 55.172 58 25 1 207 263 160 217 8.60e-15 73.9
MsaG028568 MtrunA17_Chr4g0051881 47.581 124 51 2 341 450 122 245 1.67e-26 110
MsaG028568 MtrunA17_Chr4g0051881 55.072 69 30 1 207 274 178 246 4.59e-16 79.7
MsaG028568 MtrunA17_Chr2g0294231 61.538 78 30 0 368 445 187 264 3.39e-26 110
MsaG028568 MtrunA17_Chr2g0294231 52.941 68 31 1 207 273 203 270 4.85e-15 77.0
MsaG028568 MtrunA17_Chr1g0150801 60.526 76 29 1 365 440 84 158 5.69e-26 104
MsaG028568 MtrunA17_Chr1g0150801 40.206 97 53 2 171 262 62 158 5.61e-15 72.8
MsaG028568 MtrunA17_Chr7g0270191 52.747 91 43 0 368 458 129 219 7.26e-26 107
MsaG028568 MtrunA17_Chr7g0270191 37.273 110 63 3 176 279 109 218 7.25e-15 75.5
MsaG028568 MtrunA17_Chr1g0194481 53.846 91 42 0 368 458 142 232 8.29e-26 108
MsaG028568 MtrunA17_Chr1g0194481 51.562 64 30 1 207 269 158 221 6.94e-14 72.8
MsaG028568 MtrunA17_Chr8g0386241 47.059 102 54 0 359 460 78 179 2.78e-25 102
MsaG028568 MtrunA17_Chr8g0386241 56.140 57 24 1 207 262 103 159 6.00e-15 73.2
MsaG028568 MtrunA17_Chr5g0443131 59.259 81 32 1 370 449 143 223 7.28e-25 105
MsaG028568 MtrunA17_Chr5g0443131 52.239 67 31 1 207 272 157 223 7.95e-15 75.5
MsaG028568 MtrunA17_Chr5g0418781 54.878 82 37 0 359 440 99 180 9.24e-25 103
MsaG028568 MtrunA17_Chr5g0418781 57.895 57 23 1 207 262 124 180 1.09e-12 68.6
MsaG028568 MtrunA17_Chr7g0248721 53.333 90 41 1 351 440 108 196 1.13e-24 102
MsaG028568 MtrunA17_Chr7g0248721 49.231 65 31 2 199 262 133 196 2.26e-12 66.6
MsaG028568 MtrunA17_Chr7g0224801 54.321 81 37 0 375 455 84 164 1.32e-24 100
MsaG028568 MtrunA17_Chr7g0224801 52.632 57 26 1 207 262 93 149 1.68e-13 68.9
MsaG028568 MtrunA17_Chr4g0060271 45.946 111 52 3 337 443 209 315 6.72e-24 105
MsaG028568 MtrunA17_Chr4g0060271 44.444 81 38 3 192 265 235 315 1.03e-13 73.9
MsaG028568 MtrunA17_Chr2g0302391 49.020 102 50 2 346 445 172 273 8.79e-24 103
MsaG028568 MtrunA17_Chr2g0302391 39.535 86 45 3 201 279 200 285 2.25e-11 65.9
MsaG028568 MtrunA17_Chr4g0068541 58.442 77 32 0 368 444 192 268 9.67e-24 103
MsaG028568 MtrunA17_Chr4g0068541 53.125 64 29 1 207 269 208 271 1.12e-14 76.3
MsaG028568 MtrunA17_Chr3g0099641 47.727 88 45 1 357 443 224 311 1.33e-23 103
MsaG028568 MtrunA17_Chr3g0099641 40.000 85 49 2 208 290 252 336 1.73e-13 72.8
MsaG028568 MtrunA17_Chr4g0075201 52.381 84 39 1 363 445 246 329 8.17e-23 102
MsaG028568 MtrunA17_Chr4g0075201 49.180 61 29 2 207 265 267 327 5.72e-12 68.2
MsaG028568 MtrunA17_Chr3g0129321 54.667 75 34 0 370 444 104 178 8.98e-23 96.7
MsaG028568 MtrunA17_Chr3g0129321 53.333 60 27 1 207 265 118 177 4.83e-13 68.2
MsaG028568 MtrunA17_Chr8g0383251 53.425 73 34 0 371 443 95 167 1.13e-22 95.5
MsaG028568 MtrunA17_Chr8g0383251 53.333 60 27 1 207 265 108 167 3.56e-13 68.2
MsaG028568 MtrunA17_Chr2g0322391 52.381 84 39 1 363 445 328 411 1.33e-22 101
MsaG028568 MtrunA17_Chr2g0322391 39.759 83 48 2 207 287 349 431 4.37e-12 68.9
MsaG028568 MtrunA17_Chr2g0288871 53.165 79 36 1 366 443 287 365 1.43e-22 101
MsaG028568 MtrunA17_Chr2g0288871 39.080 87 46 3 186 265 279 365 1.58e-12 70.1
MsaG028568 MtrunA17_Chr4g0051181 53.165 79 36 1 368 445 227 305 2.09e-22 100
MsaG028568 MtrunA17_Chr4g0051181 52.459 61 27 2 207 265 243 303 5.00e-13 71.6
MsaG028568 MtrunA17_Chr7g0270831 48.837 86 43 1 368 452 200 285 2.51e-22 99.8
MsaG028568 MtrunA17_Chr7g0270831 50.000 60 28 2 208 265 217 276 3.99e-12 68.6
MsaG028568 MtrunA17_Chr7g0216891 55.000 80 31 2 362 440 201 276 8.33e-22 99.4
MsaG028568 MtrunA17_Chr7g0216891 51.724 58 26 2 207 262 219 276 1.54e-11 67.0
MsaG028568 MtrunA17_Chr1g0189391 47.959 98 47 2 344 440 60 154 2.63e-21 95.1
MsaG028568 MtrunA17_Chr1g0189391 50.847 59 27 2 207 263 97 155 3.28e-11 64.7
MsaG028568 MtrunA17_Chr4g0025061 46.237 93 49 1 354 445 330 422 5.24e-21 97.1
MsaG028568 MtrunA17_Chr4g0053281 51.765 85 37 2 365 448 250 331 7.44e-21 94.0
MsaG028568 MtrunA17_Chr4g0053281 50.000 58 27 2 208 263 267 324 1.02e-12 69.7
MsaG028568 MtrunA17_Chr4g0025051 37.594 133 82 1 314 445 265 397 1.16e-20 95.9
MsaG028568 MtrunA17_Chr1g0147881 56.098 82 32 2 365 445 246 324 1.77e-20 92.8
MsaG028568 MtrunA17_Chr1g0147881 54.386 57 24 2 208 262 263 319 1.02e-11 66.6
MsaG028568 MtrunA17_Chr7g0238921 36.735 147 76 3 384 513 124 270 5.67e-20 90.9
MsaG028568 MtrunA17_Chr7g0238921 63.158 57 20 1 207 262 124 180 9.29e-16 78.6
MsaG028568 MtrunA17_Chr6g0485431 49.398 83 41 1 362 443 132 214 8.81e-20 91.3
MsaG028568 MtrunA17_Chr6g0485431 37.168 113 53 5 205 299 152 264 6.39e-14 73.6
MsaG028568 MtrunA17_Chr6g0468181 68.519 54 17 0 223 276 18 71 2.26e-19 84.0
MsaG028568 MtrunA17_Chr3g0136961 53.425 73 31 3 371 440 123 195 2.66e-19 88.6
MsaG028568 MtrunA17_Chr3g0136961 46.667 90 39 4 208 288 139 228 1.32e-15 77.8
MsaG028568 MtrunA17_Chr5g0401821 51.899 79 37 1 365 442 180 258 5.97e-19 87.0
MsaG028568 MtrunA17_Chr5g0401821 50.000 58 27 2 208 263 200 257 2.44e-12 67.4
MsaG028568 MtrunA17_Chr4g0001361 43.396 106 49 4 354 454 137 236 1.66e-18 86.7
MsaG028568 MtrunA17_Chr4g0001361 51.667 60 27 2 208 265 163 222 4.66e-14 73.2
MsaG028568 MtrunA17_Chr4g0071521 48.276 87 44 1 364 449 225 311 1.75e-18 86.7
MsaG028568 MtrunA17_Chr1g0150271 50.794 63 30 1 382 443 99 161 1.78e-18 85.5
MsaG028568 MtrunA17_Chr1g0150271 44.286 70 37 2 208 275 102 171 2.17e-12 67.4
MsaG028568 MtrunA17_Chr2g0333851 54.688 64 28 1 382 444 167 230 3.51e-18 85.9
MsaG028568 MtrunA17_Chr2g0333851 50.000 60 28 2 208 265 170 229 7.55e-13 69.7
MsaG028568 MtrunA17_Chr1g0150281 41.935 93 47 4 354 440 106 197 5.35e-18 84.7
MsaG028568 MtrunA17_Chr1g0150281 50.877 57 26 2 208 262 141 197 1.57e-13 71.2
MsaG028568 MtrunA17_Chr7g0228941 49.351 77 36 2 365 440 35 109 1.48e-16 76.3
MsaG028568 MtrunA17_Chr7g0228941 43.860 57 30 2 208 262 53 109 9.79e-11 59.7
MsaG028568 MtrunA17_Chr3g0139021 48.718 78 39 1 365 441 295 372 1.95e-16 81.6
MsaG028568 MtrunA17_Chr1g0184691 49.351 77 38 1 365 440 274 350 4.50e-16 80.1
MsaG028568 MtrunA17_Chr1g0184691 54.237 59 25 2 208 264 294 352 3.41e-13 71.2
MsaG028568 MtrunA17_Chr4g0024391 39.785 93 55 1 354 445 199 291 6.38e-16 80.5
MsaG028568 MtrunA17_Chr2g0284321 52.381 63 29 1 385 446 36 98 2.84e-15 75.1
MsaG028568 MtrunA17_Chr2g0284321 50.000 60 28 2 208 265 36 95 6.92e-12 65.1
MsaG028568 MtrunA17_Chr8g0379461 40.000 90 51 2 385 471 77 166 3.15e-15 75.5
MsaG028568 MtrunA17_Chr8g0379461 39.785 93 48 4 208 298 77 163 4.40e-12 66.2
MsaG028568 MtrunA17_Chr2g0289181 53.226 62 28 1 385 445 15 76 4.16e-15 75.1
MsaG028568 MtrunA17_Chr2g0289181 58.333 60 23 2 208 265 15 74 7.34e-15 74.3
MsaG028568 MtrunA17_Chr7g0270051 46.575 73 38 1 385 456 54 126 8.90e-15 74.7
MsaG028568 MtrunA17_Chr7g0270051 51.667 60 27 2 208 265 54 113 1.68e-11 65.1
MsaG028568 MtrunA17_Chr1g0202461 38.947 95 56 2 365 458 243 336 1.60e-13 72.4
MsaG028568 MtrunA17_Chr1g0202461 49.315 73 33 3 206 276 260 330 1.21e-12 69.7
MsaG028568 MtrunA17_Chr5g0419241 54.167 48 22 0 363 410 56 103 4.68e-13 65.5
MsaG028568 MtrunA17_Chr2g0293481 37.190 121 66 3 347 465 238 350 4.69e-13 71.6
MsaG028568 MtrunA17_Chr2g0319961 47.619 63 32 1 385 446 81 143 5.04e-13 69.3
MsaG028568 MtrunA17_Chr8g0387501 43.243 74 41 1 383 455 128 201 5.36e-13 69.7
MsaG028568 MtrunA17_Chr8g0387501 43.011 93 44 5 208 293 130 220 2.26e-12 67.8
MsaG028568 MtrunA17_Chr1g0188961 58.824 51 20 1 404 454 3 52 1.41e-12 63.2
MsaG028568 MtrunA17_Chr8g0348311 46.154 78 40 2 385 461 156 232 1.53e-12 68.9
MsaG028568 MtrunA17_Chr3g0126391 51.724 58 24 2 207 260 133 190 2.05e-12 68.6
MsaG028568 MtrunA17_Chr3g0126391 42.683 82 37 2 383 461 132 206 5.12e-12 67.4
MsaG028568 MtrunA17_Chr8g0387981 51.724 58 24 2 207 260 132 189 2.41e-12 68.6
MsaG028568 MtrunA17_Chr8g0387981 32.308 130 60 3 384 510 132 236 2.99e-11 65.1
MsaG028568 MtrunA17_Chr1g0188971 65.000 40 14 0 365 404 43 82 4.55e-12 62.0
MsaG028568 MtrunA17_Chr7g0248691 47.692 65 33 1 385 448 155 219 5.17e-12 67.4
MsaG028568 MtrunA17_Chr8g0347251 42.254 71 32 3 207 273 136 201 7.51e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028568 AT2G38470.1 57.102 352 128 10 204 546 181 518 4.41e-107 330
MsaG028568 AT5G07100.1 44.340 424 100 11 24 446 8 296 7.89e-93 286
MsaG028568 AT2G03340.1 44.064 438 189 15 27 463 108 490 1.62e-91 290
MsaG028568 AT4G26640.7 41.247 417 226 5 43 453 7 410 4.39e-91 289
MsaG028568 AT4G26640.2 41.247 417 226 5 43 453 47 450 1.15e-90 289
MsaG028568 AT2G30250.1 43.226 465 165 14 2 445 3 389 1.71e-88 278
MsaG028568 AT2G30250.1 55.385 65 28 1 208 271 329 393 1.02e-15 79.7
MsaG028568 AT1G13960.1 42.326 430 171 11 27 443 103 468 1.27e-85 275
MsaG028568 AT4G26640.5 54.440 259 99 5 201 453 29 274 5.81e-85 269
MsaG028568 AT4G26640.6 54.440 259 99 5 201 453 29 274 5.81e-85 269
MsaG028568 AT4G26640.4 54.440 259 99 5 201 453 29 274 5.81e-85 269
MsaG028568 AT4G26640.3 54.440 259 99 5 201 453 29 274 5.81e-85 269
MsaG028568 AT4G26640.1 54.826 259 98 5 201 453 133 378 1.83e-84 271
MsaG028568 AT5G07100.2 57.438 242 41 5 206 446 23 203 2.42e-82 256
MsaG028568 AT5G07100.4 57.438 242 41 5 206 446 23 203 2.42e-82 256
MsaG028568 AT5G07100.5 57.438 242 41 5 206 446 23 203 2.42e-82 256
MsaG028568 AT5G07100.3 57.438 242 41 5 206 446 23 203 2.42e-82 256
MsaG028568 AT1G13960.2 50.554 271 110 4 186 443 56 315 1.21e-79 254
MsaG028568 AT4G26440.1 48.485 297 109 6 206 462 177 469 6.60e-75 248
MsaG028568 AT3G01080.2 51.261 238 78 4 206 443 204 403 2.22e-70 233
MsaG028568 AT3G01080.2 59.091 66 26 1 384 449 205 269 4.75e-17 84.3
MsaG028568 AT3G01080.1 51.261 238 78 4 206 443 166 365 2.33e-70 232
MsaG028568 AT3G01080.1 59.091 66 26 1 384 449 167 231 5.00e-17 84.0
MsaG028568 AT2G37260.2 48.864 264 102 6 199 442 75 325 8.53e-63 210
MsaG028568 AT2G37260.3 48.864 264 102 6 199 442 77 327 9.31e-63 209
MsaG028568 AT2G37260.1 48.864 264 102 6 199 442 157 407 5.13e-62 210
MsaG028568 AT2G04880.2 45.528 246 117 4 207 446 111 345 1.80e-61 209
MsaG028568 AT2G04880.2 54.688 64 28 1 382 445 109 171 2.15e-16 82.4
MsaG028568 AT2G04880.2 55.882 68 29 1 199 265 275 342 5.80e-16 80.9
MsaG028568 AT2G04880.1 43.446 267 116 6 207 446 111 369 7.58e-61 209
MsaG028568 AT2G04880.1 54.688 64 28 1 382 445 109 171 2.53e-16 82.0
MsaG028568 AT2G04880.1 55.882 68 29 1 199 265 299 366 6.43e-16 80.9
MsaG028568 AT4G30935.1 42.194 237 123 5 208 444 169 391 2.06e-48 174
MsaG028568 AT4G30935.1 50.000 70 34 1 208 276 332 401 3.27e-15 78.6
MsaG028568 AT5G56270.1 78.431 102 20 1 345 446 450 549 4.25e-47 175
MsaG028568 AT5G56270.1 39.474 228 119 4 54 270 117 336 3.56e-32 131
MsaG028568 AT5G56270.1 60.000 60 23 1 384 443 273 331 1.88e-15 80.1
MsaG028568 AT4G12020.6 45.455 220 113 4 186 404 448 661 9.57e-46 173
MsaG028568 AT4G12020.6 50.820 61 29 1 383 443 467 526 8.56e-12 68.9
MsaG028568 AT4G12020.8 45.455 220 113 4 186 404 448 661 9.57e-46 173
MsaG028568 AT4G12020.8 50.820 61 29 1 383 443 467 526 8.56e-12 68.9
MsaG028568 AT4G12020.3 45.455 220 113 4 186 404 448 661 9.86e-46 173
MsaG028568 AT4G12020.3 50.820 61 29 1 383 443 467 526 8.58e-12 68.9
MsaG028568 AT4G12020.10 45.455 220 113 4 186 404 448 661 1.02e-45 173
MsaG028568 AT4G12020.10 50.820 61 29 1 383 443 467 526 8.65e-12 68.9
MsaG028568 AT4G12020.2 45.455 220 113 4 186 404 448 661 1.03e-45 173
MsaG028568 AT4G12020.2 50.820 61 29 1 383 443 467 526 9.12e-12 68.9
MsaG028568 AT4G12020.4 45.455 220 113 4 186 404 448 661 1.04e-45 173
MsaG028568 AT4G12020.4 50.820 61 29 1 383 443 467 526 9.04e-12 68.9
MsaG028568 AT4G12020.5 45.455 220 113 4 186 404 381 594 1.08e-45 173
MsaG028568 AT4G12020.5 50.820 61 29 1 383 443 400 459 9.54e-12 68.6
MsaG028568 AT4G12020.1 45.455 220 113 4 186 404 448 661 1.12e-45 173
MsaG028568 AT4G12020.1 50.820 61 29 1 383 443 467 526 8.81e-12 68.9
MsaG028568 AT4G12020.9 45.455 220 113 4 186 404 448 661 1.12e-45 173
MsaG028568 AT4G12020.9 50.820 61 29 1 383 443 467 526 8.81e-12 68.9
MsaG028568 AT4G12020.7 45.455 220 113 4 186 404 448 661 1.16e-45 173
MsaG028568 AT4G12020.7 50.820 61 29 1 383 443 467 526 8.96e-12 68.9
MsaG028568 AT4G12020.11 47.143 210 104 4 196 404 458 661 2.25e-45 172
MsaG028568 AT4G12020.11 50.820 61 29 1 383 443 467 526 1.13e-11 68.6
MsaG028568 AT2G44745.1 60.215 93 36 1 349 440 109 201 1.26e-33 127
MsaG028568 AT2G44745.1 59.649 57 22 1 207 262 145 201 2.03e-15 75.9
MsaG028568 AT4G39410.1 64.474 76 27 0 365 440 204 279 6.02e-28 114
MsaG028568 AT4G39410.1 51.724 58 27 1 207 263 223 280 5.02e-13 70.5
MsaG028568 AT1G55600.1 60.241 83 33 0 363 445 286 368 8.09e-28 117
MsaG028568 AT1G55600.1 55.932 59 25 1 208 265 308 366 3.86e-14 75.5
MsaG028568 AT1G29860.1 51.376 109 42 2 351 448 93 201 1.28e-26 110
MsaG028568 AT1G29860.1 49.333 75 36 2 207 280 136 209 8.02e-15 75.5
MsaG028568 AT4G18170.1 62.338 77 29 0 368 444 156 232 2.01e-26 110
MsaG028568 AT4G18170.1 38.571 140 83 3 207 344 172 310 2.30e-14 74.7
MsaG028568 AT3G01080.3 70.312 64 19 0 206 269 204 267 4.26e-26 109
MsaG028568 AT3G01080.3 59.091 66 26 1 384 449 205 269 1.19e-17 84.7
MsaG028568 AT1G69310.4 60.256 78 31 0 363 440 126 203 6.67e-26 108
MsaG028568 AT1G69310.4 54.386 57 25 1 207 262 147 203 1.73e-12 68.6
MsaG028568 AT1G69310.2 60.256 78 31 0 363 440 126 203 6.67e-26 108
MsaG028568 AT1G69310.2 54.386 57 25 1 207 262 147 203 1.73e-12 68.6
MsaG028568 AT1G69310.1 60.256 78 31 0 363 440 126 203 6.67e-26 108
MsaG028568 AT1G69310.1 54.386 57 25 1 207 262 147 203 1.73e-12 68.6
MsaG028568 AT1G64000.1 59.211 76 31 0 365 440 95 170 1.34e-25 104
MsaG028568 AT1G64000.1 56.140 57 24 1 207 262 114 170 5.46e-15 74.3
MsaG028568 AT5G41570.1 59.211 76 31 0 365 440 79 154 1.66e-25 103
MsaG028568 AT5G41570.1 56.140 57 24 1 207 262 98 154 1.29e-14 72.8
MsaG028568 AT5G13080.1 53.012 83 39 0 371 453 54 136 8.35e-25 100
MsaG028568 AT5G13080.1 54.386 57 25 1 207 262 67 123 3.41e-15 73.2
MsaG028568 AT5G49520.1 61.728 81 30 1 368 447 205 285 9.92e-25 107
MsaG028568 AT5G49520.1 53.125 64 29 1 207 269 221 284 7.78e-14 73.9
MsaG028568 AT5G26170.1 58.571 70 29 0 371 440 100 169 1.08e-24 101
MsaG028568 AT5G26170.1 51.724 58 27 1 207 263 113 170 1.51e-14 72.4
MsaG028568 AT5G46350.1 52.688 93 44 0 370 462 169 261 1.45e-24 105
MsaG028568 AT5G46350.1 50.000 72 35 1 199 269 175 246 4.14e-13 70.9
MsaG028568 AT2G46130.1 53.571 84 39 0 357 440 3 86 2.40e-24 98.2
MsaG028568 AT2G46130.1 59.649 57 22 1 207 262 30 86 6.98e-16 74.3
MsaG028568 AT2G47260.1 59.211 76 31 0 368 443 158 233 3.13e-24 104
MsaG028568 AT2G47260.1 53.125 64 29 1 207 269 174 237 3.64e-14 74.3
MsaG028568 AT1G62300.1 42.657 143 68 5 315 443 230 372 5.31e-24 106
MsaG028568 AT1G62300.1 50.000 60 28 2 208 265 313 372 1.39e-11 67.4
MsaG028568 AT3G01970.1 62.500 72 27 0 371 442 52 123 8.66e-24 97.8
MsaG028568 AT3G01970.1 57.627 59 22 2 207 263 65 122 4.48e-13 67.4
MsaG028568 AT4G04450.2 52.809 89 41 1 358 445 172 260 9.56e-24 104
MsaG028568 AT4G04450.2 43.836 73 39 2 208 278 199 271 3.95e-12 68.9
MsaG028568 AT5G64810.1 57.746 71 30 0 371 441 97 167 1.53e-23 98.6
MsaG028568 AT5G64810.1 50.877 57 27 1 207 262 110 166 1.63e-12 67.0
MsaG028568 AT5G15130.2 53.846 78 35 1 367 443 168 245 1.60e-23 104
MsaG028568 AT5G15130.2 44.595 74 39 2 207 278 185 258 2.95e-12 69.7
MsaG028568 AT5G15130.1 53.846 78 35 1 367 443 210 287 2.19e-23 104
MsaG028568 AT5G15130.1 44.595 74 39 2 207 278 227 300 2.91e-12 69.7
MsaG028568 AT4G04450.1 52.809 89 41 1 358 445 266 354 4.69e-23 103
MsaG028568 AT4G04450.1 43.836 73 39 2 208 278 293 365 6.18e-12 68.6
MsaG028568 AT4G22070.4 51.724 87 41 1 358 443 271 357 1.12e-22 102
MsaG028568 AT4G22070.4 50.000 60 28 2 208 265 298 357 1.14e-11 67.8
MsaG028568 AT4G22070.3 51.724 87 41 1 358 443 271 357 1.12e-22 102
MsaG028568 AT4G22070.3 50.000 60 28 2 208 265 298 357 1.14e-11 67.8
MsaG028568 AT4G22070.2 51.724 87 41 1 358 443 271 357 1.12e-22 102
MsaG028568 AT4G22070.2 50.000 60 28 2 208 265 298 357 1.14e-11 67.8
MsaG028568 AT4G22070.1 51.724 87 41 1 358 443 271 357 1.12e-22 102
MsaG028568 AT4G22070.1 50.000 60 28 2 208 265 298 357 1.14e-11 67.8
MsaG028568 AT1G68150.1 53.165 79 36 1 368 445 219 297 2.43e-22 99.4
MsaG028568 AT1G68150.1 52.459 61 27 2 207 265 235 295 3.12e-13 72.0
MsaG028568 AT1G18860.1 52.564 78 36 1 367 443 222 299 1.97e-21 98.2
MsaG028568 AT1G18860.1 50.820 61 28 2 207 265 239 299 3.26e-11 66.2
MsaG028568 AT1G69310.3 56.410 78 30 1 363 440 126 199 3.07e-21 94.4
MsaG028568 AT3G62340.1 47.525 101 43 1 368 468 102 192 6.81e-21 93.2
MsaG028568 AT3G62340.1 50.000 74 35 2 207 278 118 191 2.91e-13 70.9
MsaG028568 AT4G01720.1 54.545 77 34 1 368 443 223 299 1.40e-20 95.5
MsaG028568 AT4G01720.1 35.185 108 63 3 165 265 192 299 8.82e-12 67.8
MsaG028568 AT2G46130.2 50.000 84 38 1 357 440 3 82 8.99e-20 85.1
MsaG028568 AT2G46130.2 54.386 57 21 2 207 262 30 82 2.36e-11 61.2
MsaG028568 AT2G21900.1 50.000 76 35 1 373 445 95 170 1.49e-19 87.4
MsaG028568 AT2G21900.1 46.269 67 35 1 207 272 109 175 9.42e-13 67.8
MsaG028568 AT4G31550.1 55.128 78 31 2 365 441 230 304 2.05e-19 90.1
MsaG028568 AT4G31550.1 49.333 75 36 2 208 280 247 321 8.66e-14 73.2
MsaG028568 AT4G31550.2 55.128 78 31 2 365 441 229 303 2.12e-19 89.7
MsaG028568 AT4G31550.2 49.333 75 36 2 208 280 246 320 8.66e-14 73.2
MsaG028568 AT2G24570.1 57.143 77 29 2 365 440 227 300 2.50e-19 89.7
MsaG028568 AT2G24570.1 54.386 57 24 2 208 262 244 300 5.97e-13 70.5
MsaG028568 AT4G24240.1 52.500 80 37 1 364 442 261 340 2.55e-19 90.1
MsaG028568 AT4G24240.1 53.448 58 25 2 208 263 282 339 4.41e-13 71.2
MsaG028568 AT2G23320.1 50.633 79 35 2 365 442 224 299 2.77e-19 89.4
MsaG028568 AT2G23320.1 53.448 58 25 2 208 263 241 298 2.16e-12 68.6
MsaG028568 AT4G31800.2 50.704 71 33 2 377 445 103 173 1.54e-18 85.9
MsaG028568 AT4G31800.2 38.776 98 55 4 198 291 100 196 1.44e-14 73.9
MsaG028568 AT4G31800.1 50.704 71 33 2 377 445 168 238 3.08e-18 86.3
MsaG028568 AT4G31800.1 38.776 98 55 4 198 291 165 261 2.66e-14 74.3
MsaG028568 AT1G80840.1 51.562 64 30 1 382 444 144 207 3.17e-18 85.9
MsaG028568 AT1G80840.1 53.333 60 26 2 208 265 147 206 4.40e-13 70.5
MsaG028568 AT5G43290.1 43.434 99 38 2 360 440 72 170 1.45e-17 83.6
MsaG028568 AT5G43290.1 63.793 58 20 1 206 262 113 170 5.09e-16 79.0
MsaG028568 AT2G25000.2 50.000 64 31 1 383 445 102 165 1.80e-17 82.0
MsaG028568 AT2G25000.2 47.619 63 31 2 208 268 104 166 9.42e-13 68.6
MsaG028568 AT2G25000.4 50.000 64 31 1 383 445 102 165 1.80e-17 82.0
MsaG028568 AT2G25000.4 47.619 63 31 2 208 268 104 166 9.42e-13 68.6
MsaG028568 AT5G28650.1 50.649 77 37 1 365 440 243 319 2.08e-17 84.0
MsaG028568 AT5G28650.1 54.237 59 25 2 208 264 263 321 9.46e-13 70.1
MsaG028568 AT2G25000.3 50.000 64 31 1 383 445 124 187 3.72e-17 81.6
MsaG028568 AT2G25000.3 47.619 63 31 2 208 268 126 188 1.24e-12 68.6
MsaG028568 AT2G25000.1 50.000 64 31 1 383 445 145 208 5.31e-17 81.6
MsaG028568 AT2G25000.1 47.619 63 31 2 208 268 147 209 1.71e-12 68.6
MsaG028568 AT3G04670.1 50.649 77 37 1 365 440 243 319 5.44e-17 82.8
MsaG028568 AT3G04670.1 52.542 59 26 2 208 264 263 321 1.23e-12 69.7
MsaG028568 AT1G69810.2 46.835 79 40 2 367 443 128 206 8.86e-17 82.0
MsaG028568 AT2G30590.1 51.948 77 36 1 365 440 294 370 1.11e-16 82.4
MsaG028568 AT2G30590.1 54.237 59 25 2 208 264 314 372 6.20e-12 67.8
MsaG028568 AT1G69810.1 46.835 79 40 2 367 443 186 264 1.11e-16 82.4
MsaG028568 AT4G23550.1 44.156 77 42 1 373 448 129 205 5.44e-15 76.6
MsaG028568 AT5G52830.1 40.404 99 56 3 365 461 147 244 9.66e-14 73.2
MsaG028568 AT5G52830.1 44.048 84 43 3 206 287 164 245 2.95e-12 68.6
MsaG028568 AT1G29280.1 50.000 60 29 1 385 443 75 134 1.65e-13 71.2
MsaG028568 AT4G01250.1 50.769 65 31 1 385 448 129 193 1.76e-13 71.6
MsaG028568 AT5G24110.1 38.182 110 51 3 198 303 104 200 4.21e-13 70.9
MsaG028568 AT2G40740.1 36.283 113 52 4 331 439 135 231 1.33e-12 68.9
MsaG028568 AT2G40740.1 33.884 121 66 6 207 322 173 284 5.31e-12 67.4
MsaG028568 AT3G58710.1 48.387 62 31 1 385 445 72 133 1.67e-12 68.6
MsaG028568 AT2G40740.3 36.283 113 52 4 331 439 144 240 1.76e-12 68.9
MsaG028568 AT2G40740.3 33.884 121 66 6 207 322 182 293 7.30e-12 67.0
MsaG028568 AT3G58710.2 48.387 62 31 1 385 445 71 132 1.81e-12 68.2
MsaG028568 AT2G34830.2 37.624 101 54 2 347 446 195 287 4.46e-12 68.6
MsaG028568 AT2G34830.1 37.624 101 54 2 347 446 186 278 4.72e-12 68.6
MsaG028568 AT1G30650.1 37.624 101 54 2 347 446 188 280 6.12e-12 68.2
MsaG028568 AT4G11070.2 43.243 74 36 3 192 260 94 166 2.82e-11 65.1
MsaG028568 AT4G11070.1 43.243 74 36 3 192 260 126 198 3.44e-11 65.1
MsaG028568 AT4G23810.1 45.588 68 33 2 198 261 149 216 5.95e-11 64.3
MsaG028568 AT2G46400.1 41.772 79 39 3 207 278 104 182 6.57e-11 63.9
MsaG028568 AT5G45050.4 46.154 65 34 1 385 448 1042 1106 7.00e-11 65.9
MsaG028568 AT5G45050.2 46.154 65 34 1 385 448 1153 1217 7.52e-11 65.9
MsaG028568 AT5G45050.1 46.154 65 34 1 385 448 1181 1245 7.82e-11 65.9

Find 132 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTTAGTAGGACAATT+AGG 0.195776 5:-64168234 None:intergenic
TTGCTGTGGTTGCTGGTAAT+TGG 0.255028 5:-64168097 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5:+64168281 MsaT028568.1:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5:-64169993 None:intergenic
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5:-64169777 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5:+64169649 MsaT028568.1:CDS
TTGGTTGTTGCTGTGGTTGC+TGG 0.310701 5:-64168104 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5:+64169867 MsaT028568.1:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5:-64168378 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.320050 5:+64169945 MsaT028568.1:CDS
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5:-64168898 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5:-64166667 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5:-64169857 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5:-64167416 None:intergenic
TCTTCTTAGTAGGACAATTA+GGG 0.344330 5:-64168233 None:intergenic
AAATCCATTGTTAGTGTTGT+TGG 0.345706 5:-64168061 None:intergenic
ATCATCGGATCTTCGGCTTA+AGG 0.345909 5:-64168133 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5:+64168970 MsaT028568.1:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5:+64167337 MsaT028568.1:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5:-64169796 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5:-64168387 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5:-64167415 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5:-64169621 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5:-64166733 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5:-64169759 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5:-64169768 None:intergenic
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5:+64168987 MsaT028568.1:CDS
TGCTGTTGTTGATTCATGTA+TGG 0.399426 5:-64169918 None:intergenic
GTCCCTGCTGCTCGTGGAAG+TGG 0.404827 5:+64169711 MsaT028568.1:CDS
GTGCACTTGTAGTAACTTCT+CGG 0.405315 5:-64168207 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5:+64166682 MsaT028568.1:CDS
TGTATCCATCATCGGATCTT+CGG 0.417428 5:-64168140 None:intergenic
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5:-64168243 None:intergenic
GAGAATTCTTCAATATCAAT+AGG 0.426198 5:+64168459 MsaT028568.1:CDS
TTCAGCACAGCAAAGATTCA+AGG 0.431997 5:-64170010 None:intergenic
TTGAGAATCCATAATTTCCT+TGG 0.432499 5:-64169875 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5:+64169671 MsaT028568.1:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5:-64167318 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5:-64166640 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5:-64166643 None:intergenic
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5:-64166712 None:intergenic
CTCAAGGTTTGATAATCAAA+TGG 0.448868 5:+64169893 MsaT028568.1:CDS
CACCACCTGATCGACTCCTT+TGG 0.450337 5:-64168512 None:intergenic
CTTCCACTTCCACGAGCAGC+AGG 0.452522 5:-64169714 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5:+64166590 MsaT028568.1:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5:+64168282 MsaT028568.1:CDS
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5:+64169851 MsaT028568.1:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5:+64169650 MsaT028568.1:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5:+64168254 MsaT028568.1:CDS
GGATACAATTGGCGAAAATA+CGG 0.468717 5:+64168156 MsaT028568.1:CDS
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5:-64166676 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.472866 5:-64168456 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5:-64169753 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5:-64169737 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5:+64168988 MsaT028568.1:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5:+64168942 MsaT028568.1:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5:-64169630 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5:-64168123 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5:+64167459 MsaT028568.1:CDS
ACAGCAGCAGCAACAACAAA+TGG 0.486734 5:+64169935 MsaT028568.1:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5:+64169781 MsaT028568.1:CDS
AGGAGTCGATCAGGTGGTGC+TGG 0.504228 5:+64168516 MsaT028568.1:CDS
GATCCGATGATGGATACAAT+TGG 0.507251 5:+64168145 MsaT028568.1:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5:-64168039 None:intergenic
TGTCCTTGAGGTGCTTGTTG+TGG 0.510790 5:-64169822 None:intergenic
TCGCCAATTGTATCCATCAT+CGG 0.511759 5:-64168148 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.512302 5:-64169973 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5:-64169767 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5:-64169849 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5:+64168411 MsaT028568.1:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5:+64169858 MsaT028568.1:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5:+64168419 MsaT028568.1:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5:-64169620 None:intergenic
GTTTGAGTTGGTTGTTGCTG+TGG 0.529472 5:-64168111 None:intergenic
TCTCACCAAAGGAGTCGATC+AGG 0.531160 5:+64168507 MsaT028568.1:CDS
GTTGTCTGAACTACAACTCT+AGG 0.534551 5:-64168922 None:intergenic
TCCATCTGTAACCATCATCC+AGG 0.539396 5:-64168960 None:intergenic
AAGGAAATTATGGATTCTCA+AGG 0.541036 5:+64169877 MsaT028568.1:CDS
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5:+64168255 MsaT028568.1:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5:+64167374 MsaT028568.1:CDS
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5:-64167429 None:intergenic
CACGAGCAGCAGGGACATCA+TGG 0.549848 5:-64169704 None:intergenic
GTGATGCATATGACTGATCA+TGG 0.555757 5:-64168401 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5:-64166700 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5:-64168324 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5:-64166639 None:intergenic
CATGATGTCCCTGCTGCTCG+TGG 0.564051 5:+64169705 MsaT028568.1:CDS
CAAACCAACAACACTAACAA+TGG 0.564435 5:+64168057 MsaT028568.1:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5:-64167448 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5:+64167354 MsaT028568.1:CDS
TTAAGCCGAAGATCCGATGA+TGG 0.572015 5:+64168135 MsaT028568.1:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5:+64167353 MsaT028568.1:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5:-64167312 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5:-64166638 None:intergenic
TACGGACAAAAGCAAGTGAA+AGG 0.574309 5:+64168174 MsaT028568.1:CDS
TCCTGGATGATGGTTACAGA+TGG 0.575655 5:+64168959 MsaT028568.1:CDS
AGATGATAATAACAATTCAA+GGG 0.581933 5:+64166591 MsaT028568.1:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5:-64166666 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5:+64168496 MsaT028568.1:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5:+64168350 MsaT028568.1:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5:+64167923 MsaT028568.1:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5:+64169773 MsaT028568.1:CDS
GACATTGATATCCTGGATGA+TGG 0.594877 5:+64168949 MsaT028568.1:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5:-64166664 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5:+64168556 MsaT028568.1:CDS
TGTGGCCTCTGACTCTGAAG+AGG 0.602459 5:-64169804 None:intergenic
GCATAACAGGAGAATCAAGA+AGG 0.606162 5:-64166720 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5:+64169765 MsaT028568.1:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5:+64169004 MsaT028568.1:CDS
TGGATGATGGTTACAGATGG+AGG 0.611243 5:+64168962 MsaT028568.1:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5:+64169672 MsaT028568.1:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5:-64166711 None:intergenic
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5:+64169799 MsaT028568.1:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5:-64169834 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5:-64166574 None:intergenic
CACCAAAGGAGTCGATCAGG+TGG 0.629630 5:+64168510 MsaT028568.1:CDS
AGGCCACAACAAGCACCTCA+AGG 0.634387 5:+64169819 MsaT028568.1:CDS
AATTCTTCAATATCAATAGG+AGG 0.635230 5:+64168462 MsaT028568.1:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5:+64168316 MsaT028568.1:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5:+64166592 MsaT028568.1:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5:-64166665 None:intergenic
CACAGCCCTTAAATCATGTG+AGG 0.655326 5:-64169655 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5:-64166637 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5:+64169852 MsaT028568.1:CDS
TTCCACTTCCACGAGCAGCA+GGG 0.659373 5:-64169713 None:intergenic
GATCAGTCATATGCATCACA+TGG 0.661879 5:+64168405 MsaT028568.1:CDS
ATTTGACGAAGAGGAACCTG+AGG 0.689057 5:+64168545 MsaT028568.1:CDS
TGGTGATGAATTTGACGAAG+AGG 0.689132 5:+64168536 MsaT028568.1:CDS
TGAACACTAGCAATCTCAGG+TGG 0.699786 5:-64168036 None:intergenic
ATTGGATGAACAATTCTGAG+GGG 0.734397 5:+64167355 MsaT028568.1:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5:-64166697 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5:+64169616 MsaT028568.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 64166541 64170031 64166541 ID=MsaG028568
Chr5 mRNA 64166541 64170031 64166541 ID=MsaT028568.1;Parent=MsaG028568
Chr5 exon 64166541 64166756 64166541 ID=MsaT028568.1.exon1;Parent=MsaT028568.1
Chr5 CDS 64166541 64166756 64166541 ID=cds.MsaT028568.1;Parent=MsaT028568.1
Chr5 exon 64167306 64167491 64167306 ID=MsaT028568.1.exon2;Parent=MsaT028568.1
Chr5 CDS 64167306 64167491 64167306 ID=cds.MsaT028568.1;Parent=MsaT028568.1
Chr5 exon 64167934 64168577 64167934 ID=MsaT028568.1.exon3;Parent=MsaT028568.1
Chr5 CDS 64167934 64168577 64167934 ID=cds.MsaT028568.1;Parent=MsaT028568.1
Chr5 exon 64168861 64169025 64168861 ID=MsaT028568.1.exon4;Parent=MsaT028568.1
Chr5 CDS 64168861 64169025 64168861 ID=cds.MsaT028568.1;Parent=MsaT028568.1
Chr5 exon 64169599 64170031 64169599 ID=MsaT028568.1.exon5;Parent=MsaT028568.1
Chr5 CDS 64169599 64170031 64169599 ID=cds.MsaT028568.1;Parent=MsaT028568.1
Gene Sequence

>MsaT028568.1

ATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAACAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCATCCGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTCCACCTGAGATTGCTAGTGTTCAAACCAACAACACTAACAATGGATTTCAATCAGACTACTCCAATTACCAGCAACCACAGCAACAACCAACTCAAACCTTAAGCCGAAGATCCGATGATGGATACAATTGGCGAAAATACGGACAAAAGCAAGTGAAAGGAAGTGAAAATCCGAGAAGTTACTACAAGTGCACATACCCTAATTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATAGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCAGGTGGTGCTGGTGATGAATTTGACGAAGAGGAACCTGAGGCTAAAAGATGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAACATAACCATGATGTCCCTGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAACAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAGGTTTGATAATCAAATGGTGCCATACATGAATCAACAACAGCAGCAGCAACAACAAATGGCTGAAAATGGTTTTTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTGTGCTGA
Protein sequence

>MsaT028568.1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFPPEIASVQTNNTNNGFQSDYSNYQQPQQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC*