AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG028802


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028802 MtrunA17_Chr5g0437131 96.629 712 22 1 1 710 1 712 0.0 1430
MsaG028802 MtrunA17_Chr6g0480541 64.090 401 132 2 322 710 807 1207 0.0 554
MsaG028802 MtrunA17_Chr6g0480481 65.789 228 42 1 376 603 9 200 8.55e-101 308
MsaG028802 MtrunA17_Chr8g0369241 37.143 350 170 8 400 704 138 482 5.27e-57 209
MsaG028802 MtrunA17_Chr1g0210061 34.347 329 189 7 396 704 605 926 6.29e-49 185
MsaG028802 MtrunA17_Chr3g0139371 30.357 336 202 4 393 701 66 396 2.90e-44 164
MsaG028802 MtrunA17_Chr4g0058241 30.120 332 199 6 397 700 94 420 3.54e-43 161
MsaG028802 MtrunA17_Chr3g0116701 29.970 337 203 7 393 701 86 417 2.82e-40 153
MsaG028802 MtrunA17_Chr3g0123491 29.710 276 164 4 392 642 84 354 4.54e-36 141
MsaG028802 MtrunA17_Chr4g0065851 29.909 331 181 11 398 708 22 321 1.83e-31 129
MsaG028802 MtrunA17_Chr5g0443351 30.183 328 184 9 398 708 19 318 4.26e-31 127
MsaG028802 MtrunA17_Chr2g0287271 30.120 332 179 12 398 708 22 321 4.77e-31 128
MsaG028802 MtrunA17_Chr3g0096631 30.211 331 180 10 398 708 22 321 7.95e-30 125
MsaG028802 MtrunA17_Chr8g0392811 29.102 323 184 10 398 703 114 408 2.34e-29 124
MsaG028802 MtrunA17_Chr6g0482681 31.288 326 173 11 398 703 86 380 4.01e-29 122
MsaG028802 MtrunA17_Chr8g0359091 29.268 328 187 9 398 708 23 322 5.05e-28 119
MsaG028802 MtrunA17_Chr4g0045841 27.974 311 187 8 407 707 61 344 2.68e-27 114
MsaG028802 MtrunA17_Chr4g0030151 29.260 311 184 12 407 707 45 329 4.25e-27 114
MsaG028802 MtrunA17_Chr7g0270371 28.931 318 176 11 401 702 75 358 1.64e-26 112
MsaG028802 MtrunA17_Chr7g0246591 27.225 382 222 14 336 703 86 425 2.04e-26 113
MsaG028802 MtrunA17_Chr8g0350311 25.831 391 220 13 335 704 83 424 2.80e-26 112
MsaG028802 MtrunA17_Chr1g0194201 28.931 318 176 11 401 702 75 358 3.61e-26 111
MsaG028802 MtrunA17_Chr4g0030231 27.564 312 190 9 407 708 46 331 3.82e-26 110
MsaG028802 MtrunA17_Chr2g0314321 27.855 359 191 11 387 708 11 338 4.54e-26 113
MsaG028802 MtrunA17_Chr8g0369451 27.157 313 195 8 400 707 3 287 9.85e-26 110
MsaG028802 MtrunA17_Chr3g0141871 27.500 320 193 10 400 707 31 323 1.50e-25 109
MsaG028802 MtrunA17_Chr5g0409421 28.115 313 192 9 400 707 3 287 4.29e-25 108
MsaG028802 MtrunA17_Chr7g0248461 26.774 310 193 8 407 707 44 328 4.47e-25 107
MsaG028802 MtrunA17_Chr8g0378831 26.087 322 195 10 400 707 31 323 6.40e-25 107
MsaG028802 MtrunA17_Chr8g0339221 28.981 314 184 11 401 706 4 286 6.57e-25 108
MsaG028802 MtrunA17_Chr1g0193081 27.900 319 180 11 401 703 75 359 8.00e-25 107
MsaG028802 MtrunA17_Chr6g0480291 55.422 83 36 1 628 710 1 82 9.29e-25 98.6
MsaG028802 MtrunA17_Chr8g0348481 25.806 310 196 8 407 707 43 327 1.40e-24 106
MsaG028802 MtrunA17_Chr8g0387401 27.848 316 186 11 407 709 58 344 3.51e-24 105
MsaG028802 MtrunA17_Chr2g0320011 27.273 330 168 11 401 703 88 372 1.92e-23 103
MsaG028802 MtrunA17_Chr2g0284091 26.994 326 174 11 401 703 40 324 2.12e-23 102
MsaG028802 MtrunA17_Chr5g0397261 28.025 314 184 10 407 707 47 331 3.73e-23 102
MsaG028802 MtrunA17_Chr2g0277011 27.576 330 166 12 402 703 90 374 5.16e-23 102
MsaG028802 MtrunA17_Chr1g0187371 27.564 312 186 11 405 702 22 307 7.51e-23 100
MsaG028802 MtrunA17_Chr5g0407121 24.433 397 206 11 392 704 29 415 1.40e-22 101
MsaG028802 MtrunA17_Chr4g0051261 26.299 308 194 8 400 700 3 284 7.76e-22 96.7
MsaG028802 MtrunA17_Chr3g0102571 31.980 197 110 7 514 704 189 367 5.96e-21 96.3
MsaG028802 MtrunA17_Chr2g0293491 25.484 310 194 9 400 700 3 284 1.97e-20 92.4
MsaG028802 MtrunA17_Chr4g0057791 27.564 312 199 10 401 703 218 511 3.01e-20 95.1
MsaG028802 MtrunA17_Chr4g0002001 26.061 330 201 11 400 709 3 309 1.17e-19 90.5
MsaG028802 MtrunA17_Chr3g0107051 28.037 321 165 14 399 710 19 282 1.30e-19 92.4
MsaG028802 MtrunA17_Chr4g0027671 33.929 168 99 6 544 704 317 479 1.61e-19 92.8
MsaG028802 MtrunA17_Chr4g0027671 37.162 148 84 3 399 541 37 180 4.54e-16 82.0
MsaG028802 MtrunA17_Chr6g0483151 26.518 313 190 11 397 700 10 291 7.35e-19 89.7
MsaG028802 MtrunA17_Chr1g0190131 29.870 231 137 7 397 618 5 219 8.76e-19 87.0
MsaG028802 MtrunA17_Chr5g0402551 27.673 318 166 11 398 703 131 396 1.17e-18 90.1
MsaG028802 MtrunA17_Chr2g0320631 31.609 174 107 6 544 710 316 484 1.47e-18 89.7
MsaG028802 MtrunA17_Chr2g0320631 37.162 148 84 3 399 541 38 181 4.33e-15 79.0
MsaG028802 MtrunA17_Chr4g0074111 29.536 237 143 9 387 613 4 226 1.52e-18 88.6
MsaG028802 MtrunA17_Chr7g0244521 30.864 243 129 10 394 619 5 225 1.74e-18 89.0
MsaG028802 MtrunA17_Chr4g0030241 41.071 112 61 3 514 622 10 119 1.99e-18 83.6
MsaG028802 MtrunA17_Chr1g0170551 27.273 275 167 9 400 656 6 265 2.32e-18 90.1
MsaG028802 MtrunA17_Chr8g0370321 31.098 164 101 4 548 703 251 410 5.03e-18 87.4
MsaG028802 MtrunA17_Chr8g0370321 32.886 149 91 3 398 541 35 179 2.88e-12 69.3
MsaG028802 MtrunA17_Chr1g0197721 28.634 227 136 7 408 619 58 273 5.64e-18 87.8
MsaG028802 MtrunA17_Chr3g0130781 28.758 306 165 13 424 700 44 325 5.83e-18 87.4
MsaG028802 MtrunA17_Chr1g0179611 30.508 177 111 5 535 704 308 479 6.23e-18 87.8
MsaG028802 MtrunA17_Chr1g0179611 34.899 149 88 3 398 541 41 185 5.67e-15 78.6
MsaG028802 MtrunA17_Chr3g0122781 31.556 225 122 8 503 706 512 725 9.28e-18 87.8
MsaG028802 MtrunA17_Chr3g0131861 26.349 315 172 12 407 700 103 378 1.15e-17 87.0
MsaG028802 MtrunA17_Chr4g0013131 29.237 236 142 9 394 619 5 225 1.35e-17 86.3
MsaG028802 MtrunA17_Chr8g0379091 30.000 230 135 10 395 612 20 235 1.88e-17 86.3
MsaG028802 MtrunA17_Chr2g0317501 26.403 303 183 8 407 698 140 413 2.01e-17 86.7
MsaG028802 MtrunA17_Chr3g0140631 31.980 197 121 5 407 601 43 228 2.08e-17 83.6
MsaG028802 MtrunA17_Chr6g0468751 25.879 313 160 10 401 702 19 270 8.58e-17 84.0
MsaG028802 MtrunA17_Chr5g0432491 24.768 323 174 12 399 710 21 285 1.31e-16 83.2
MsaG028802 MtrunA17_Chr4g0008561 27.706 231 150 7 394 618 12 231 3.27e-16 82.8
MsaG028802 MtrunA17_Chr6g0453681 25.559 313 161 10 401 702 19 270 3.72e-16 82.0
MsaG028802 MtrunA17_Chr3g0102601 29.146 199 107 7 509 704 38 205 5.01e-16 78.6
MsaG028802 MtrunA17_Chr1g0166101 27.083 240 136 9 396 617 19 237 6.94e-16 80.5
MsaG028802 MtrunA17_Chr4g0066691 26.498 317 193 11 393 698 96 383 8.14e-16 81.3
MsaG028802 MtrunA17_Chr4g0001331 25.078 319 171 13 395 703 14 274 1.46e-15 79.7
MsaG028802 MtrunA17_Chr1g0205931 25.387 323 172 11 400 707 54 322 3.58e-15 79.3
MsaG028802 MtrunA17_Chr3g0114511 28.378 222 123 8 394 600 25 225 4.43e-15 78.2
MsaG028802 MtrunA17_Chr8g0374701 27.178 287 152 9 424 703 154 390 5.79e-15 78.6
MsaG028802 MtrunA17_Chr3g0101091 29.707 239 137 12 399 623 26 247 8.82e-15 75.9
MsaG028802 MtrunA17_Chr3g0101081 29.707 239 137 12 399 623 26 247 8.82e-15 75.9
MsaG028802 MtrunA17_Chr1g0205421 29.911 224 125 9 396 605 7 212 1.17e-14 77.0
MsaG028802 MtrunA17_Chr3g0101111 29.707 239 137 12 399 623 26 247 1.18e-14 75.5
MsaG028802 MtrunA17_Chr8g0383451 28.761 226 138 8 407 622 4 216 2.06e-14 76.3
MsaG028802 MtrunA17_Chr2g0333821 23.824 319 175 13 395 703 8 268 1.09e-13 73.9
MsaG028802 MtrunA17_Chr3g0129721 31.416 226 132 9 401 617 25 236 1.10e-13 72.4
MsaG028802 MtrunA17_Chr8g0345801 27.064 218 136 8 397 605 11 214 3.09e-13 70.5
MsaG028802 MtrunA17_Chr7g0225201 28.767 219 128 10 399 605 27 229 3.43e-13 71.2
MsaG028802 MtrunA17_Chr3g0132591 25.238 210 143 4 401 610 112 307 3.53e-13 72.4
MsaG028802 MtrunA17_Chr5g0402111 29.798 198 93 5 512 706 111 265 3.67e-13 71.2
MsaG028802 MtrunA17_Chr4g0025041 26.991 226 118 6 486 709 75 255 3.85e-13 72.0
MsaG028802 MtrunA17_Chr4g0059751 26.054 261 141 11 401 632 89 326 3.97e-13 72.0
MsaG028802 MtrunA17_Chr8g0353621 28.141 199 126 5 407 601 16 201 5.49e-13 70.1
MsaG028802 MtrunA17_Chr7g0245031 24.528 212 139 6 401 605 148 345 7.41e-13 71.6
MsaG028802 MtrunA17_Chr3g0133541 28.571 224 127 10 397 602 303 511 7.57e-13 72.0
MsaG028802 MtrunA17_Chr1g0202101 26.829 205 129 7 419 617 299 488 8.02e-13 71.6
MsaG028802 MtrunA17_Chr1g0191221 27.753 227 139 7 407 622 128 340 8.37e-13 71.6
MsaG028802 MtrunA17_Chr5g0406251 26.866 201 124 8 426 616 318 505 1.70e-12 70.5
MsaG028802 MtrunA17_Chr1g0171451 32.701 211 112 11 403 600 416 609 1.78e-12 70.9
MsaG028802 MtrunA17_Chr4g0038091 28.972 214 121 7 400 600 19 214 2.56e-12 70.9
MsaG028802 MtrunA17_Chr3g0132671 28.090 267 122 14 445 703 97 301 4.02e-12 69.3
MsaG028802 MtrunA17_Chr3g0132681 28.182 220 129 10 399 605 26 229 5.82e-12 67.4
MsaG028802 MtrunA17_Chr4g0038501 28.505 214 122 7 400 600 19 214 6.51e-12 69.3
MsaG028802 MtrunA17_Chr1g0188031 26.201 229 128 9 397 605 16 223 8.58e-12 67.8
MsaG028802 MtrunA17_Chr7g0274941 25.651 269 136 10 443 703 62 274 1.04e-11 66.6
MsaG028802 MtrunA17_Chr2g0322401 40.860 93 45 4 512 601 110 195 1.15e-11 67.4
MsaG028802 MtrunA17_Chr6g0453671 24.159 327 169 13 394 702 5 270 1.93e-11 66.6
MsaG028802 MtrunA17_Chr3g0129771 27.751 209 126 10 405 602 37 231 4.20e-11 66.2
MsaG028802 MtrunA17_Chr4g0055451 29.218 243 130 9 397 620 1 220 4.44e-11 65.1
MsaG028802 MtrunA17_Chr8g0384001 29.778 225 132 11 390 602 16 226 7.78e-11 65.5
MsaG028802 MtrunA17_Chr6g0480191 60.000 40 16 0 671 710 1 40 9.07e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028802 AT2G40120.1 78.402 338 73 0 367 704 227 564 0.0 580
MsaG028802 AT2G40120.1 47.283 184 74 7 3 184 1 163 4.67e-22 101
MsaG028802 AT1G73460.2 65.969 382 127 2 332 710 786 1167 0.0 548
MsaG028802 AT1G73460.1 65.969 382 127 2 332 710 786 1167 0.0 548
MsaG028802 AT1G73450.1 69.540 348 106 0 363 710 803 1150 4.70e-180 545
MsaG028802 AT3G17750.1 66.486 370 122 1 343 710 767 1136 7.05e-175 531
MsaG028802 AT5G35980.2 37.143 350 170 8 400 704 121 465 2.36e-57 209
MsaG028802 AT5G35980.1 37.143 350 170 8 400 704 121 465 3.16e-57 210
MsaG028802 AT5G35980.3 37.143 350 170 8 400 704 86 430 3.98e-57 209
MsaG028802 AT3G25840.2 33.731 335 183 8 396 704 350 671 1.23e-46 176
MsaG028802 AT3G25840.1 33.731 335 183 8 396 704 612 933 2.60e-46 177
MsaG028802 AT4G24740.7 30.267 337 202 7 397 705 56 387 1.68e-44 164
MsaG028802 AT4G24740.1 30.357 336 201 7 397 704 94 424 3.75e-44 164
MsaG028802 AT1G13350.1 31.722 331 202 8 393 704 434 759 4.53e-44 170
MsaG028802 AT1G13350.2 31.722 331 202 8 393 704 461 786 4.82e-44 170
MsaG028802 AT3G53640.1 31.627 332 201 6 393 704 315 640 7.35e-44 168
MsaG028802 AT1G13350.3 31.722 331 202 8 393 704 507 832 7.89e-44 169
MsaG028802 AT4G24740.6 30.675 326 193 7 407 704 1 321 4.97e-43 159
MsaG028802 AT4G24740.9 30.675 326 193 7 407 704 1 321 4.97e-43 159
MsaG028802 AT4G24740.2 30.675 326 193 7 407 704 1 321 4.97e-43 159
MsaG028802 AT3G53570.3 29.651 344 206 7 392 704 92 430 9.87e-42 158
MsaG028802 AT3G53570.5 29.651 344 206 7 392 704 92 430 9.87e-42 158
MsaG028802 AT3G53570.1 29.651 344 206 7 392 704 106 444 1.06e-41 158
MsaG028802 AT3G53570.4 29.651 344 206 7 392 704 106 444 1.06e-41 158
MsaG028802 AT3G53570.2 29.651 344 206 7 392 704 106 444 1.06e-41 158
MsaG028802 AT4G32660.1 31.268 339 200 5 393 703 63 396 2.45e-40 153
MsaG028802 AT4G32660.3 31.454 337 198 5 393 701 55 386 2.73e-40 152
MsaG028802 AT4G03175.1 64.516 93 33 0 612 704 1 93 1.50e-38 138
MsaG028802 AT4G24740.3 32.941 255 143 4 400 631 97 346 1.71e-38 146
MsaG028802 AT4G24740.5 33.065 248 138 4 407 631 1 243 2.33e-37 140
MsaG028802 AT4G32660.2 33.456 272 153 4 393 641 63 329 1.07e-35 139
MsaG028802 AT5G19010.1 31.776 321 168 11 398 698 22 311 4.33e-33 135
MsaG028802 AT4G32660.4 32.168 286 161 5 445 702 3 283 1.67e-32 127
MsaG028802 AT4G24740.4 31.278 227 128 4 397 600 94 315 5.85e-32 127
MsaG028802 AT2G42880.2 30.816 331 178 11 398 708 22 321 3.22e-29 122
MsaG028802 AT2G42880.1 30.816 331 178 11 398 708 22 321 4.86e-29 123
MsaG028802 AT3G14720.1 30.211 331 180 12 398 708 22 321 9.86e-29 122
MsaG028802 AT3G18040.5 30.061 326 177 11 398 703 15 309 1.02e-28 121
MsaG028802 AT3G18040.1 30.061 326 177 11 398 703 20 314 1.08e-28 121
MsaG028802 AT4G24740.10 33.175 211 113 5 522 704 8 218 1.16e-28 114
MsaG028802 AT4G24740.8 33.175 211 113 5 522 704 8 218 1.16e-28 114
MsaG028802 AT3G18040.4 30.061 326 177 11 398 703 129 423 1.32e-28 122
MsaG028802 AT3G18040.3 30.061 326 177 11 398 703 129 423 2.41e-28 121
MsaG028802 AT3G14720.2 30.211 331 180 12 398 708 22 321 4.12e-28 118
MsaG028802 AT3G14720.3 30.211 331 180 12 398 708 22 321 4.12e-28 118
MsaG028802 AT2G01450.3 28.086 324 186 10 398 703 13 307 7.05e-28 118
MsaG028802 AT2G01450.1 28.086 324 186 10 398 703 13 307 7.05e-28 118
MsaG028802 AT2G01450.2 28.086 324 186 10 398 703 13 307 7.05e-28 118
MsaG028802 AT2G01450.4 28.086 324 186 10 398 703 13 307 7.05e-28 118
MsaG028802 AT1G53510.1 28.701 331 185 10 398 708 22 321 1.29e-27 119
MsaG028802 AT1G73670.1 28.912 377 209 14 352 704 41 382 1.43e-27 118
MsaG028802 AT3G59790.1 28.896 308 182 9 407 704 66 346 6.56e-27 114
MsaG028802 AT1G18150.3 29.819 332 182 11 398 709 101 401 6.67e-27 116
MsaG028802 AT1G18150.2 29.819 332 182 11 398 709 101 401 6.67e-27 116
MsaG028802 AT1G18150.1 29.819 332 182 11 398 709 101 401 6.67e-27 116
MsaG028802 AT5G14640.1 28.981 314 181 10 401 702 74 357 2.56e-26 112
MsaG028802 AT5G14640.2 28.981 314 181 10 401 702 74 357 2.56e-26 112
MsaG028802 AT4G01370.1 28.115 313 185 9 407 707 49 333 6.25e-26 110
MsaG028802 AT4G00720.1 26.420 405 204 15 341 703 70 422 7.03e-26 112
MsaG028802 AT4G18710.1 28.834 326 168 11 401 703 40 324 9.55e-26 110
MsaG028802 AT1G07880.2 27.389 314 192 10 405 708 37 324 1.22e-25 109
MsaG028802 AT2G43790.1 27.832 309 190 7 407 707 69 352 4.02e-25 108
MsaG028802 AT3G61160.4 28.707 317 180 11 401 703 102 386 4.21e-25 108
MsaG028802 AT3G61160.1 28.707 317 180 11 401 703 102 386 4.40e-25 109
MsaG028802 AT3G61160.2 28.707 317 180 11 401 703 109 393 4.50e-25 109
MsaG028802 AT3G45640.1 28.065 310 189 9 407 707 44 328 6.76e-25 107
MsaG028802 AT5G26751.1 27.987 318 179 11 401 702 69 352 1.06e-24 107
MsaG028802 AT4G13020.7 27.742 310 191 7 400 704 3 284 1.07e-24 107
MsaG028802 AT2G46070.1 28.852 305 187 7 407 704 47 328 1.10e-24 107
MsaG028802 AT2G46070.3 29.180 305 186 8 407 704 81 362 1.21e-24 107
MsaG028802 AT4G13020.4 28.065 310 190 7 400 704 3 284 1.27e-24 107
MsaG028802 AT4G13020.1 28.065 310 190 7 400 704 3 284 1.40e-24 107
MsaG028802 AT4G13020.6 27.742 310 191 7 400 704 3 284 1.67e-24 107
MsaG028802 AT4G19110.1 27.796 313 193 8 400 707 3 287 1.71e-24 107
MsaG028802 AT4G19110.2 27.796 313 193 8 400 707 3 287 1.95e-24 107
MsaG028802 AT1G01560.2 28.344 314 185 10 407 708 46 331 2.15e-24 106
MsaG028802 AT4G13020.2 27.742 310 191 7 400 704 11 292 2.86e-24 107
MsaG028802 AT4G13020.3 27.742 310 191 7 400 704 11 292 2.89e-24 107
MsaG028802 AT3G05840.2 27.673 318 180 11 401 702 73 356 3.77e-24 106
MsaG028802 AT3G05840.1 27.673 318 180 11 401 702 73 356 3.77e-24 106
MsaG028802 AT1G06390.2 27.660 329 174 12 401 706 70 357 8.91e-24 105
MsaG028802 AT1G06390.1 27.660 329 174 12 401 706 70 357 8.91e-24 105
MsaG028802 AT4G11330.1 28.526 312 185 11 407 707 49 333 1.21e-23 103
MsaG028802 AT2G30980.1 27.660 329 174 11 401 706 72 359 1.63e-23 104
MsaG028802 AT3G61160.5 28.169 284 161 9 401 657 102 369 2.64e-23 103
MsaG028802 AT3G61160.3 29.213 267 146 9 401 640 102 352 3.14e-23 102
MsaG028802 AT1G73690.1 28.481 316 188 10 397 704 7 292 3.52e-23 103
MsaG028802 AT3G61160.6 29.213 267 146 9 401 640 109 359 3.79e-23 102
MsaG028802 AT1G76540.1 27.097 310 190 12 405 702 18 303 7.23e-23 100
MsaG028802 AT5G45430.2 27.900 319 185 11 400 707 3 287 7.73e-23 103
MsaG028802 AT4G18710.2 31.602 231 137 8 401 622 34 252 8.15e-23 99.4
MsaG028802 AT4G36450.1 27.157 313 192 9 400 703 31 316 8.66e-23 101
MsaG028802 AT5G45430.1 27.900 319 185 11 400 707 3 287 8.73e-23 103
MsaG028802 AT1G57870.1 30.040 253 139 10 392 622 64 300 1.03e-22 102
MsaG028802 AT1G57870.4 30.040 253 139 10 392 622 64 300 1.03e-22 102
MsaG028802 AT1G57870.2 30.040 253 139 10 392 622 64 300 1.03e-22 102
MsaG028802 AT4G13020.8 27.044 318 202 7 400 709 3 298 1.05e-22 101
MsaG028802 AT1G20930.1 26.129 310 193 9 405 702 20 305 1.09e-22 100
MsaG028802 AT4G13020.5 27.796 313 196 7 400 704 3 293 1.18e-22 102
MsaG028802 AT3G18040.2 30.579 242 127 8 476 703 12 226 1.23e-22 101
MsaG028802 AT1G59580.2 25.857 321 197 10 400 707 31 323 2.15e-22 100
MsaG028802 AT1G59580.1 25.857 321 197 10 400 707 31 323 2.15e-22 100
MsaG028802 AT1G57870.3 30.040 253 139 10 392 622 64 300 2.80e-22 100
MsaG028802 AT1G09840.3 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.7 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.10 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.6 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.4 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.1 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.9 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.5 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.8 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT1G09840.2 31.301 246 145 9 392 622 65 301 3.02e-22 100
MsaG028802 AT2G46070.2 32.889 225 136 5 407 625 47 262 1.11e-21 97.1
MsaG028802 AT3G48750.1 27.331 311 187 10 400 700 3 284 3.19e-21 95.1
MsaG028802 AT2G18170.1 25.466 322 197 10 400 707 31 323 5.19e-21 95.9
MsaG028802 AT2G38620.2 27.052 329 199 10 400 709 3 309 9.17e-21 94.4
MsaG028802 AT1G01560.3 28.239 301 176 11 407 695 46 318 9.52e-21 94.7
MsaG028802 AT1G01560.4 33.649 211 115 8 407 606 46 242 1.32e-20 92.8
MsaG028802 AT1G01560.1 33.649 211 115 8 407 606 46 242 1.32e-20 92.8
MsaG028802 AT5G22840.1 30.857 175 109 5 543 710 308 477 1.81e-20 96.3
MsaG028802 AT5G22840.1 35.135 148 87 3 399 541 43 186 2.82e-14 76.6
MsaG028802 AT1G66750.1 29.299 314 182 14 400 704 12 294 3.75e-20 93.2
MsaG028802 AT4G35500.1 31.765 170 94 5 548 704 257 417 4.13e-20 94.4
MsaG028802 AT4G35500.1 36.242 149 86 3 398 541 35 179 2.39e-16 82.8
MsaG028802 AT1G18040.1 26.582 316 186 11 397 700 8 289 6.20e-20 93.2
MsaG028802 AT1G07880.1 30.476 210 127 6 405 606 37 235 6.60e-20 90.5
MsaG028802 AT4G35500.2 31.765 170 94 5 548 704 258 418 6.84e-20 93.6
MsaG028802 AT4G35500.2 34.000 150 89 4 398 541 35 180 4.22e-14 75.5
MsaG028802 AT5G63370.7 26.113 337 198 13 395 706 286 596 9.22e-20 94.4
MsaG028802 AT5G63370.8 26.113 337 198 13 395 706 286 596 9.22e-20 94.4
MsaG028802 AT5G63370.4 26.113 337 198 13 395 706 286 596 9.22e-20 94.4
MsaG028802 AT5G63370.6 26.113 337 198 13 395 706 286 596 9.22e-20 94.4
MsaG028802 AT5G63370.1 26.113 337 198 13 395 706 286 596 9.22e-20 94.4
MsaG028802 AT4G19110.3 28.112 249 154 6 462 707 5 231 9.73e-20 92.8
MsaG028802 AT2G17530.1 31.176 170 95 5 548 704 256 416 1.07e-19 92.8
MsaG028802 AT2G17530.1 37.584 149 84 3 398 541 35 179 4.04e-17 85.1
MsaG028802 AT2G17530.3 31.176 170 95 5 548 704 256 416 1.07e-19 92.8
MsaG028802 AT2G17530.3 37.584 149 84 3 398 541 35 179 4.04e-17 85.1
MsaG028802 AT5G63370.2 26.113 337 198 13 395 706 152 462 1.59e-19 92.8
MsaG028802 AT5G63370.3 26.113 337 198 13 395 706 152 462 1.59e-19 92.8
MsaG028802 AT3G54180.1 26.364 330 198 10 400 709 3 307 1.80e-19 90.5
MsaG028802 AT1G10210.2 25.000 320 201 10 400 707 31 323 1.84e-19 91.3
MsaG028802 AT1G10210.3 25.000 320 201 10 400 707 31 323 1.84e-19 91.3
MsaG028802 AT1G10210.1 25.000 320 201 10 400 707 31 323 1.84e-19 91.3
MsaG028802 AT2G38620.4 31.500 200 116 6 514 709 65 247 6.71e-19 87.4
MsaG028802 AT3G44850.1 31.548 168 105 5 544 704 318 482 7.49e-19 91.3
MsaG028802 AT3G44850.1 36.486 148 85 3 399 541 43 186 4.00e-16 82.4
MsaG028802 AT1G09840.11 41.176 119 65 4 508 622 57 174 7.67e-19 88.2
MsaG028802 AT1G54610.1 26.645 304 183 8 407 699 124 398 3.59e-18 89.0
MsaG028802 AT1G54610.3 26.645 304 183 8 407 699 124 398 3.59e-18 89.0
MsaG028802 AT1G54610.2 26.645 304 183 8 407 699 124 398 3.59e-18 89.0
MsaG028802 AT1G03740.1 26.190 378 204 15 360 698 151 492 3.82e-18 89.4
MsaG028802 AT1G03740.2 26.190 378 204 15 360 698 151 492 4.09e-18 89.4
MsaG028802 AT3G53030.1 31.034 174 108 6 544 710 305 473 6.04e-18 88.2
MsaG028802 AT3G53030.1 33.548 155 94 3 392 541 33 183 3.81e-15 79.3
MsaG028802 AT1G08650.1 25.000 312 174 9 400 703 14 273 6.86e-18 85.1
MsaG028802 AT3G15220.1 23.867 331 174 9 393 709 7 273 1.04e-17 88.2
MsaG028802 AT1G53165.1 23.867 331 174 9 393 709 7 273 1.20e-17 87.8
MsaG028802 AT2G38490.1 32.500 240 125 13 395 618 22 240 1.29e-17 86.7
MsaG028802 AT1G53165.2 23.867 331 174 9 393 709 7 273 1.57e-17 87.4
MsaG028802 AT1G53165.3 23.867 331 174 9 393 709 7 273 1.69e-17 87.4
MsaG028802 AT2G17530.2 37.584 149 84 3 398 541 35 179 1.83e-17 85.1
MsaG028802 AT5G04510.2 27.848 237 125 8 408 619 51 266 2.03e-17 85.5
MsaG028802 AT1G50240.3 29.778 225 136 8 401 618 6 215 2.10e-17 87.8
MsaG028802 AT1G50240.2 29.778 225 136 8 401 618 6 215 2.10e-17 87.8
MsaG028802 AT1G53050.2 27.476 313 179 12 407 704 140 419 2.50e-17 86.7
MsaG028802 AT1G53050.1 27.476 313 179 12 407 704 140 419 2.50e-17 86.7
MsaG028802 AT4G30960.1 29.825 228 136 9 394 611 17 230 2.87e-17 85.5
MsaG028802 AT5G04510.1 27.848 237 125 8 408 619 51 266 5.36e-17 85.1
MsaG028802 AT5G63370.5 28.629 248 143 9 395 622 286 519 6.04e-17 85.1
MsaG028802 AT5G63370.10 28.629 248 143 9 395 622 286 519 6.04e-17 85.1
MsaG028802 AT2G38620.3 29.464 224 143 6 400 609 3 225 7.97e-17 81.3
MsaG028802 AT2G38620.1 29.464 224 143 6 400 609 3 225 7.97e-17 81.3
MsaG028802 AT2G25880.1 31.980 197 121 5 407 601 31 216 8.23e-17 82.0
MsaG028802 AT2G30360.1 26.708 322 166 13 394 703 14 277 8.76e-17 84.0
MsaG028802 AT2G25880.4 29.130 230 143 7 379 601 13 229 1.14e-16 82.0
MsaG028802 AT2G37840.1 28.947 228 145 7 397 618 8 224 1.19e-16 84.7
MsaG028802 AT5G04510.3 27.848 237 125 8 408 619 51 266 1.31e-16 81.6
MsaG028802 AT5G63370.9 28.629 248 143 9 395 622 152 385 1.38e-16 83.2
MsaG028802 AT5G39440.1 27.385 325 167 11 386 704 10 271 1.97e-16 83.2
MsaG028802 AT4G32830.1 31.472 197 122 5 407 601 37 222 3.19e-16 80.5
MsaG028802 AT2G25880.3 31.472 197 122 5 407 601 92 277 3.29e-16 81.3
MsaG028802 AT2G34180.1 24.324 333 168 12 394 708 50 316 3.81e-16 82.4
MsaG028802 AT1G71530.1 28.194 227 138 7 407 622 153 365 7.55e-16 82.0
MsaG028802 AT3G01090.3 29.565 230 134 8 401 619 19 231 1.00e-15 81.3
MsaG028802 AT3G01090.1 29.565 230 134 8 401 619 19 231 1.00e-15 81.3
MsaG028802 AT3G01090.2 29.565 230 134 8 401 619 42 254 1.02e-15 81.3
MsaG028802 AT3G29160.3 28.696 230 136 8 401 619 20 232 1.11e-15 79.7
MsaG028802 AT1G08650.2 28.095 210 131 6 400 601 14 211 1.53e-15 78.2
MsaG028802 AT3G10540.1 27.004 237 127 8 408 619 52 267 2.24e-15 80.1
MsaG028802 AT1G71530.2 28.194 227 138 7 407 622 153 365 2.63e-15 79.7
MsaG028802 AT2G26980.1 29.787 235 133 10 398 618 11 227 3.03e-15 78.6
MsaG028802 AT3G29160.1 28.696 230 136 8 401 619 20 232 3.62e-15 79.3
MsaG028802 AT3G29160.2 28.696 230 136 8 401 619 20 232 3.62e-15 79.3
MsaG028802 AT5G55090.1 31.122 196 84 7 512 703 108 256 3.95e-15 79.0
MsaG028802 AT3G53930.1 28.319 226 145 7 399 618 18 232 4.56e-15 79.7
MsaG028802 AT3G53930.2 28.319 226 145 7 399 618 18 232 4.73e-15 79.7
MsaG028802 AT2G26980.4 29.787 235 133 10 398 618 21 237 5.00e-15 78.6
MsaG028802 AT2G26980.3 29.787 235 133 10 398 618 11 227 5.20e-15 78.6
MsaG028802 AT3G04530.1 28.652 178 111 5 435 605 43 211 5.81e-15 76.3
MsaG028802 AT1G71530.3 28.194 227 138 7 407 622 153 365 5.98e-15 78.2
MsaG028802 AT5G57630.2 29.032 217 119 7 399 601 10 205 8.85e-15 77.4
MsaG028802 AT4G22940.2 25.743 303 192 9 405 699 107 384 1.07e-14 78.2
MsaG028802 AT5G57630.1 29.032 217 119 7 399 601 10 205 1.14e-14 77.4
MsaG028802 AT2G26980.5 29.787 235 133 10 398 618 11 227 1.25e-14 77.0
MsaG028802 AT5G55090.2 32.161 199 78 9 512 703 170 318 1.34e-14 77.4
MsaG028802 AT2G26980.2 29.787 235 133 10 398 618 11 227 1.50e-14 75.1
MsaG028802 AT2G41140.1 25.872 344 187 11 377 703 93 385 1.79e-14 77.4
MsaG028802 AT4G26890.1 37.838 111 65 2 512 622 107 213 2.28e-14 76.6
MsaG028802 AT4G22940.1 25.743 303 192 9 405 699 107 384 2.56e-14 76.3
MsaG028802 AT2G25090.1 24.380 242 152 8 394 617 8 236 2.78e-14 76.3
MsaG028802 AT1G48490.3 23.734 316 166 10 325 601 768 1047 4.69e-14 76.6
MsaG028802 AT1G48490.2 23.734 316 166 10 325 601 768 1047 4.69e-14 76.6
MsaG028802 AT1G48490.1 23.734 316 166 10 325 601 768 1047 4.69e-14 76.6
MsaG028802 AT1G48490.4 23.734 316 166 10 325 601 769 1048 4.69e-14 76.6
MsaG028802 AT1G53570.2 25.796 314 167 12 405 708 218 475 5.03e-14 76.3
MsaG028802 AT1G53570.3 25.796 314 167 12 405 708 218 475 5.03e-14 76.3
MsaG028802 AT1G53570.6 25.796 314 167 12 405 708 218 475 5.19e-14 75.9
MsaG028802 AT1G53570.1 25.796 314 167 12 405 708 218 475 5.45e-14 75.9
MsaG028802 AT1G53570.4 25.796 314 167 12 405 708 218 475 5.49e-14 75.9
MsaG028802 AT1G53570.7 25.796 314 167 12 405 708 218 475 5.53e-14 75.9
MsaG028802 AT5G01820.1 30.000 230 136 11 399 618 20 234 1.64e-13 73.9
MsaG028802 AT1G12680.1 25.581 215 142 5 401 613 107 305 1.92e-13 73.9
MsaG028802 AT5G21222.1 26.695 236 138 6 398 617 10 226 1.93e-13 74.7
MsaG028802 AT5G21222.2 26.695 236 138 6 398 617 10 226 1.93e-13 74.7
MsaG028802 AT5G21222.4 26.695 236 138 6 398 617 10 226 1.93e-13 74.7
MsaG028802 AT5G21222.3 26.695 236 138 6 398 617 10 226 1.93e-13 74.7
MsaG028802 AT1G69220.2 23.986 296 167 9 410 700 231 473 2.07e-13 74.3
MsaG028802 AT3G61960.2 28.111 217 135 8 397 605 6 209 3.09e-13 73.6
MsaG028802 AT3G61960.1 28.111 217 135 8 397 605 6 209 3.14e-13 73.6
MsaG028802 AT3G23000.1 27.801 241 134 11 396 618 20 238 4.44e-13 72.4
MsaG028802 AT3G01085.3 23.377 308 191 10 405 698 119 395 5.49e-13 72.8
MsaG028802 AT3G01085.1 23.377 308 191 10 405 698 119 395 6.57e-13 72.4
MsaG028802 AT3G01085.2 23.377 308 191 10 405 698 119 395 6.57e-13 72.4
MsaG028802 AT2G17890.1 24.437 311 179 7 400 703 107 368 1.68e-12 71.2
MsaG028802 AT4G04710.2 33.987 153 96 4 462 611 96 246 1.99e-12 70.5
MsaG028802 AT4G04710.3 33.987 153 96 4 462 611 82 232 2.02e-12 70.5
MsaG028802 AT1G48260.1 28.395 243 140 10 391 618 1 224 2.68e-12 70.1
MsaG028802 AT4G04710.1 28.862 246 135 10 462 703 96 305 4.55e-12 69.7
MsaG028802 AT4G04710.4 28.862 246 135 10 462 703 96 305 4.62e-12 69.3
MsaG028802 AT4G36070.1 25.316 316 170 10 400 703 70 331 4.81e-12 69.7
MsaG028802 AT2G41860.2 25.316 316 172 13 400 705 53 314 5.12e-12 69.3
MsaG028802 AT3G08730.1 24.299 214 137 6 401 605 134 331 7.40e-12 68.6
MsaG028802 AT3G08730.2 24.299 214 137 6 401 605 134 331 7.40e-12 68.6
MsaG028802 AT2G42550.1 37.624 101 52 3 512 603 119 217 7.48e-12 67.8
MsaG028802 AT3G08720.1 24.645 211 140 6 401 605 140 337 8.44e-12 68.6
MsaG028802 AT3G08720.3 24.645 211 140 6 401 605 140 337 8.44e-12 68.6
MsaG028802 AT3G08720.4 24.645 211 140 6 401 605 140 337 8.44e-12 68.6
MsaG028802 AT3G08720.2 24.645 211 140 6 401 605 140 337 8.44e-12 68.6
MsaG028802 AT3G48260.1 30.556 216 122 11 399 602 22 221 8.67e-12 68.6
MsaG028802 AT4G38470.3 26.341 205 128 8 426 620 313 504 1.42e-11 68.2
MsaG028802 AT1G14000.1 28.638 213 128 9 407 607 168 368 1.56e-11 67.4
MsaG028802 AT2G32510.1 27.363 201 101 6 507 704 102 260 1.58e-11 67.0
MsaG028802 AT1G18350.1 29.310 232 129 10 389 606 33 243 2.30e-11 65.9
MsaG028802 AT4G26070.4 32.484 157 77 6 462 606 124 263 3.77e-11 65.9
MsaG028802 AT4G26070.5 32.484 157 77 6 462 606 112 251 3.81e-11 65.9
MsaG028802 AT2G34290.1 36.275 102 58 2 508 602 107 208 4.43e-11 64.7
MsaG028802 AT3G13530.1 27.570 214 124 7 400 600 19 214 4.85e-11 67.0
MsaG028802 AT2G05060.1 35.000 100 58 2 508 602 122 219 5.70e-11 65.1
MsaG028802 AT4G26070.2 32.484 157 77 6 462 606 125 264 6.28e-11 65.1
MsaG028802 AT4G26070.3 32.484 157 77 6 462 606 125 264 6.28e-11 65.1
MsaG028802 AT2G41930.1 37.383 107 49 5 512 602 115 219 7.70e-11 64.7
MsaG028802 AT4G26070.1 32.484 157 77 6 462 606 125 264 8.77e-11 64.3

Find 127 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGTGCAACAGTGTCTTTC+TGG 0.134594 5:+68870211 None:intergenic
GCTTAATTTCCTTCAAATTA+AGG 0.240015 5:+68870112 None:intergenic
TTTGAAGAAATTCAGTTAGA+TGG 0.268348 5:-68870336 MsaT028802.1:CDS
ATGCTTCACCACCAGATTCT+TGG 0.279095 5:+68869172 None:intergenic
TTTGATGGACCTGATTTCTT+TGG 0.291801 5:-68870438 MsaT028802.1:CDS
CAGAAATTCAACCAAGAATC+TGG 0.301956 5:-68869183 MsaT028802.1:CDS
AGAAGAAACAGAGTTTGATT+TGG 0.306764 5:+68871235 None:intergenic
TGCTCAAATGATGTCTCTTC+TGG 0.309562 5:+68868061 None:intergenic
TCTTGCAGTAGGCCTTCTTT+TGG 0.316790 5:+68867976 None:intergenic
AAATCAAACTCTGTTTCTTC+TGG 0.317003 5:-68871233 MsaT028802.1:CDS
ATGGTCGCTCGGCTGTATTT+TGG 0.344765 5:-68868751 MsaT028802.1:CDS
CCTTCTCGTGTTTCTTCTAC+AGG 0.345339 5:-68871176 MsaT028802.1:intron
GCTCATTACTCGACAGTGTT+TGG 0.357897 5:-68868988 MsaT028802.1:CDS
AATCGCGTGCTGTGCCGAAT+TGG 0.358187 5:+68870538 None:intergenic
TGCAAAAGCAGTCCAGGTTC+AGG 0.360410 5:-68870171 MsaT028802.1:CDS
ATCATCACGACTGCATCATT+TGG 0.362539 5:+68868562 None:intergenic
TGCCTTTGTAATCATTCATC+TGG 0.378440 5:-68870279 MsaT028802.1:CDS
GAAATAAAGATTATTGATCT+TGG 0.381733 5:-68868879 MsaT028802.1:CDS
AACTTCGATGGTTAAGTCAT+AGG 0.383815 5:+68869996 None:intergenic
CTTTAGCTACCTTAATTTGA+AGG 0.398512 5:-68870121 MsaT028802.1:CDS
GCAATCTGAACTATGCTTCA+TGG 0.399375 5:+68870029 None:intergenic
GCACGCATGATTGGAATGTT+TGG 0.399540 5:-68868535 MsaT028802.1:CDS
CTTTGACATCCAAAGAAATC+AGG 0.400789 5:+68870429 None:intergenic
CGATTCCCATCTGAAGATCA+TGG 0.404276 5:+68869400 None:intergenic
ATGATTCTTGCACGCATGAT+TGG 0.406286 5:-68868544 MsaT028802.1:CDS
ATTGCAATATTTACATAACT+TGG 0.409904 5:-68868961 MsaT028802.1:CDS
TAAGAAGCTTGATTTCATCT+AGG 0.411237 5:+68869328 None:intergenic
GATGAGGAATTAATTCCATA+TGG 0.411809 5:+68870603 None:intergenic
CCATAGCTTTCGATCCCATT+TGG 0.420647 5:+68869958 None:intergenic
GAGTGAAGAACTCCATGTTC+CGG 0.421411 5:-68869914 MsaT028802.1:CDS
GCAGAATTTATCAATCCATA+TGG 0.423297 5:-68870618 MsaT028802.1:intron
TGAAGGCCTAACATCACTTC+AGG 0.423350 5:+68868795 None:intergenic
ATCGCGTGCTGTGCCGAATT+GGG 0.427121 5:+68870539 None:intergenic
ATGATGAAAAGATTGATATA+TGG 0.430762 5:-68868770 MsaT028802.1:CDS
TTAAGGTAGCTAAAGTTCAT+AGG 0.436586 5:+68870129 None:intergenic
CGGAGTTTGACCGGAGGAGG+TGG 0.439905 5:+68871305 None:intergenic
TCTGATAGATTGTCCCAATT+CGG 0.444063 5:-68870552 MsaT028802.1:CDS
AAATCAGGTCCATCAAAATC+AGG 0.444409 5:+68870444 None:intergenic
GTTGAAACAGATCTACCAAA+TGG 0.447645 5:-68869973 MsaT028802.1:CDS
ATGACCGAGTTGAGCACAAT+TGG 0.453092 5:+68869486 None:intergenic
TTATGACTATTTCTACCATC+AGG 0.460782 5:-68869256 MsaT028802.1:CDS
TCGGTTCAGCTGCATTCAGT+AGG 0.474081 5:-68869434 MsaT028802.1:CDS
CGGCCGTCGGAGTTGACTTC+CGG 0.476999 5:-68871272 MsaT028802.1:CDS
GTGCTCAACTCGGTCATGGC+TGG 0.478108 5:-68869480 MsaT028802.1:CDS
AGTATGTGGTGTTTATCTCC+CGG 0.479535 5:+68869285 None:intergenic
CTACAAGAACCTCCTGAACC+TGG 0.483158 5:+68870159 None:intergenic
TAAGTTTGCACGCAGAAGTT+CGG 0.485105 5:+68869215 None:intergenic
AAGAAGGCCTACTGCAAGAC+AGG 0.488234 5:-68867972 MsaT028802.1:CDS
GATGGTTCCTCCACCTCCTC+CGG 0.491108 5:-68871315 MsaT028802.1:CDS
ACCAACATCTCCATATCAAA+AGG 0.493340 5:+68868511 None:intergenic
TTTGGAGAATTGACCGTCGC+CGG 0.495527 5:+68871253 None:intergenic
CTGCGGTAACCTCCGGAACA+TGG 0.499317 5:+68869902 None:intergenic
ATATGCAACATGAACCGTAT+TGG 0.500380 5:-68870503 MsaT028802.1:CDS
GTAAATGAGCGGAGTTTGAC+CGG 0.504559 5:+68871296 None:intergenic
TTTAGTGCCTGTCTTGCAGT+AGG 0.505137 5:+68867965 None:intergenic
TTGCAATATTTACATAACTT+GGG 0.506178 5:-68868960 MsaT028802.1:CDS
ACTTCGATGGTTAAGTCATA+GGG 0.506736 5:+68869997 None:intergenic
TGACATTTACTTCATAAATG+AGG 0.507620 5:-68868449 MsaT028802.1:intron
CTTCAGGAGCTCTATAAGAC+CGG 0.509504 5:+68868811 None:intergenic
AATTCAGTTAGATGGAAATG+AGG 0.512494 5:-68870328 MsaT028802.1:CDS
ATTCGAAAGATTATTGTCAC+GGG 0.513570 5:-68870236 MsaT028802.1:CDS
TCTTCATCTGCGGTAACCTC+CGG 0.514876 5:+68869895 None:intergenic
GAGCGGAGTTTGACCGGAGG+AGG 0.517713 5:+68871302 None:intergenic
ATCATTTGAGCACCACCTAC+AGG 0.520076 5:-68868050 MsaT028802.1:CDS
GGAGATGTTGGTGAAAGGGC+AGG 0.522737 5:-68868500 MsaT028802.1:CDS
GGAGAACAGTTTGTTAGCAT+CGG 0.522830 5:-68871212 MsaT028802.1:CDS
AGTTTGACCGGAGGAGGTGG+AGG 0.526122 5:+68871308 None:intergenic
ATCTGTTTCAACAACTTCGA+TGG 0.530198 5:+68869984 None:intergenic
CGGTTCAGCTGCATTCAGTA+GGG 0.531413 5:-68869433 MsaT028802.1:CDS
TATTCGAAAGATTATTGTCA+CGG 0.532174 5:-68870237 MsaT028802.1:CDS
CATTACTCGACAGTGTTTGG+AGG 0.533015 5:-68868985 MsaT028802.1:CDS
ATTCAGTTAGATGGAAATGA+GGG 0.535418 5:-68870327 MsaT028802.1:CDS
TTGAAACAGATCTACCAAAT+GGG 0.536829 5:-68869972 MsaT028802.1:CDS
AGAGCTCCTGAAGTGATGTT+AGG 0.539217 5:-68868801 MsaT028802.1:CDS
AATTGTGCTCAACTCGGTCA+TGG 0.539716 5:-68869484 MsaT028802.1:CDS
GTATGTGGTGTTTATCTCCC+GGG 0.547446 5:+68869286 None:intergenic
ATATGGAGATGTTGGTGAAA+GGG 0.549392 5:-68868504 MsaT028802.1:CDS
CTTCACACGAGAATGTTACA+TGG 0.556068 5:+68867913 None:intergenic
GTTACATGGACTTGTATACA+TGG 0.557027 5:+68867927 None:intergenic
TCAAGCCCATGATCTTCAGA+TGG 0.559687 5:-68869406 MsaT028802.1:CDS
AAAGAATTTCTCGTAGTCAA+AGG 0.560157 5:+68871343 None:intergenic
TTAACGTCAACCCCAAAAGA+AGG 0.560479 5:-68867988 MsaT028802.1:CDS
GAATTGTACATAGAAAGAAC+AGG 0.562317 5:-68869804 MsaT028802.1:intron
TGTGTCTATATGTACAATCC+CGG 0.562438 5:-68868830 MsaT028802.1:CDS
CTTTGTAATCATTCATCTGG+AGG 0.567267 5:-68870276 MsaT028802.1:CDS
CCAAATGGGATCGAAAGCTA+TGG 0.568109 5:-68869958 MsaT028802.1:CDS
AAGATTGATATATGGTCGCT+CGG 0.568240 5:-68868762 MsaT028802.1:CDS
AGTCATAAAGACGCAGTATG+TGG 0.571598 5:+68869271 None:intergenic
GGAGTTCTTCACTCAAATCT+CGG 0.573138 5:+68869923 None:intergenic
TCGGAGTTGACTTCCGGCGA+CGG 0.574134 5:-68871266 MsaT028802.1:CDS
CAAATTAGGACGTACTTCAC+CGG 0.578259 5:+68868716 None:intergenic
GGAGGTTACCGCAGATGAAG+AGG 0.583306 5:-68869893 MsaT028802.1:CDS
ACATAGTATCGGTGACCTGT+AGG 0.583976 5:+68868035 None:intergenic
AAAATCGATAAACATAGTAT+CGG 0.584593 5:+68868024 None:intergenic
TCAAACTCCGCTCATTTACA+CGG 0.591605 5:-68871292 MsaT028802.1:CDS
CTATGCTTCATGGTAAGCAC+AGG 0.592149 5:+68870039 None:intergenic
TTCAGGAGGTTCTTGTAGCG+AGG 0.596058 5:-68870154 MsaT028802.1:CDS
GGAGGAGGTGGAGGAACCAT+CGG 0.598776 5:+68871317 None:intergenic
GATTCCCATCTGAAGATCAT+GGG 0.599777 5:+68869401 None:intergenic
CAATGAATAAATGTTCCTGA+TGG 0.601057 5:+68869241 None:intergenic
GATATGGAGATGTTGGTGAA+AGG 0.602767 5:-68868505 MsaT028802.1:CDS
CAAGCCCATGATCTTCAGAT+GGG 0.602925 5:-68869405 MsaT028802.1:CDS
GGGTTACATAGATAAGTCAA+TGG 0.603025 5:-68870307 MsaT028802.1:CDS
TTCAGGAGCTCTATAAGACC+GGG 0.603488 5:+68868812 None:intergenic
TTGTATACATGGGAAAGCCA+TGG 0.610680 5:+68867938 None:intergenic
GCATAGTTCAGATTGCTACA+AGG 0.615746 5:-68870022 MsaT028802.1:CDS
TACTATGTGACAGAATATCT+CGG 0.618368 5:-68869453 MsaT028802.1:CDS
TCAACTCGGTCATGGCTGGA+AGG 0.619414 5:-68869476 MsaT028802.1:CDS
GACTGGATTTGAAGAAAACA+AGG 0.619878 5:-68869514 MsaT028802.1:CDS
GACAGGCACTAAAACATCCA+TGG 0.620201 5:-68867955 MsaT028802.1:CDS
ATCATTCTGAGTCTGAGATG+AGG 0.620260 5:+68870587 None:intergenic
ATTATTATCCTCTTCATCTG+CGG 0.620969 5:+68869885 None:intergenic
ACTTGTCAATAAGCATGACC+CGG 0.624125 5:-68869304 MsaT028802.1:CDS
AAAAGCAGTCCAGGTTCAGG+AGG 0.632418 5:-68870168 MsaT028802.1:CDS
AGTGCCAATTGTGCTCAACT+CGG 0.634453 5:-68869490 MsaT028802.1:CDS
CCTGTAGAAGAAACACGAGA+AGG 0.643032 5:+68871176 None:intergenic
TCGCCGGAAGTCAACTCCGA+CGG 0.644520 5:+68871269 None:intergenic
CTCCAGATGAATGATTACAA+AGG 0.655100 5:+68870277 None:intergenic
CTTGTCAATAAGCATGACCC+GGG 0.661447 5:-68869303 MsaT028802.1:CDS
CCGCTCATTTACACGGCCGT+CGG 0.662462 5:-68871285 MsaT028802.1:CDS
TGAAGAACTCCATGTTCCGG+AGG 0.665401 5:-68869911 MsaT028802.1:CDS
TTACATGGACTTGTATACAT+GGG 0.672153 5:+68867928 None:intergenic
TAGTATCGGTGACCTGTAGG+TGG 0.677524 5:+68868038 None:intergenic
AAATTCAACCAAGAATCTGG+TGG 0.683493 5:-68869180 MsaT028802.1:CDS
TTCGAAAGATTATTGTCACG+GGG 0.695980 5:-68870235 MsaT028802.1:CDS
CCGACGGCCGTGTAAATGAG+CGG 0.707377 5:+68871285 None:intergenic
AATGAGCGGAGTTTGACCGG+AGG 0.740584 5:+68871299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 68867928 68871483 68867928 ID=MsaG028802
Chr5 mRNA 68867928 68871483 68867928 ID=MsaT028802.1;Parent=MsaG028802
Chr5 exon 68867928 68868110 68867928 ID=MsaT028802.1.exon6;Parent=MsaT028802.1
Chr5 CDS 68867928 68868110 68867928 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Chr5 exon 68868450 68868593 68868450 ID=MsaT028802.1.exon5;Parent=MsaT028802.1
Chr5 CDS 68868450 68868593 68868450 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Chr5 exon 68868731 68869009 68868731 ID=MsaT028802.1.exon4;Parent=MsaT028802.1
Chr5 CDS 68868731 68869009 68868731 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Chr5 exon 68869149 68869536 68869149 ID=MsaT028802.1.exon3;Parent=MsaT028802.1
Chr5 CDS 68869149 68869536 68869149 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Chr5 exon 68869805 68870636 68869805 ID=MsaT028802.1.exon2;Parent=MsaT028802.1
Chr5 CDS 68869805 68870636 68869805 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Chr5 exon 68871177 68871483 68871177 ID=MsaT028802.1.exon1;Parent=MsaT028802.1
Chr5 CDS 68871177 68871483 68871177 ID=cds.MsaT028802.1;Parent=MsaT028802.1
Gene Sequence

>MsaT028802.1

ATGGCTATGTCGAACAGTGTCGAAGCTGTGTTCGAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCAGCTCTAAGACAAGACATCATTGACAAGCACAACAATGATCTTGCTTCCTTTGACTACGAGAAATTCTTTTTTCCGATGGTTCCTCCACCTCCTCCGGTCAAACTCCGCTCATTTACACGGCCGTCGGAGTTGACTTCCGGCGACGGTCAATTCTCCAAATCAAACTCTGTTTCTTCTGGAGAACAGTTTGTTAGCATCGGTTCTTCTACTTCTCCTTCTCGTGTTTCTTCTACAGAATTTATCAATCCATATGGAATTAATTCCTCATCTCAGACTCAGAATGATTCTGAATCTTCATCTGATAGATTGTCCCAATTCGGCACAGCACGCGATTATCACGAATTCGATATGCAACATGAACCGTATTGGTATAATGAAAACGATGACGATGATGATTTCATGACTCCTGATTTTGATGGACCTGATTTCTTTGGATGTCAAAGTGAAGATAAGTTTATCTTGAATTCAGAAACCGAAAATCAACAAGATGATTCTCGTGATCTTCGTTACAACTTTGAAGAAATTCAGTTAGATGGAAATGAGGGTTACATAGATAAGTCAATGGAGCAATGCCTTTGTAATCATTCATCTGGAGGTGATGAAAATGCGACTTATTCGAAAGATTATTGTCACGGGGTCCAGAAAGACACTGTTGCACATAATTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGTAGCGAGGATCCTATGAACTTTAGCTACCTTAATTTGAAGGAAATTAAGCTGAATCTGAATGATTTTCATATGAAGGATATTAATTCGTTTGAGTCTGTTCCTGTGCTTACCATGAAGCATAGTTCAGATTGCTACAAGGATCCCTATGACTTAACCATCGAAGTTGTTGAAACAGATCTACCAAATGGGATCGAAAGCTATGGAGTAAGAGATGACCGAGATTTGAGTGAAGAACTCCATGTTCCGGAGGTTACCGCAGATGAAGAGGATAATAATACCGATGATGACCTCTTAAAATACATTCAAGATGATGAATATGAAGTATTTGAGCTAAGAATTGTACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAAGTGCCAATTGTGCTCAACTCGGTCATGGCTGGAAGGTACTATGTGACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCCCATGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTCTTAAACTTGTCAATAAGCATGACCCGGGAGATAAACACCACATACTGCGTCTTTATGACTATTTCTACCATCAGGAACATTTATTCATTGTGACCGAACTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACATTAAAGAGATTGCAGCTCATTACTCGACAGTGTTTGGAGGCATTGCAATATTTACATAACTTGGGAATTGTTCACTGCGACCTGAAGCCTGAAAACGTTCTGATCAAAAGTTACAAAAAATGTGAAATAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATCTGTGTCTATATGTACAATCCCGGTCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCGCTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTGCTCTTTCCAAATGATGCAGTCGTGATGATTCTTGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACACATAAGTACTTCACTAAAGAATATGACATTTACTTCATAAATGAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAGACATCATTTGAGCACCACCTACAGGTCACCGATACTATGTTTATCGATTTTGTCAGTTACTTGCTTAACGTCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCCATGTATACAAGTCCATGTAA

Protein sequence

>MsaT028802.1

MAMSNSVEAVFEFLRKNGLSEAESALRQDIIDKHNNDLASFDYEKFFFPMVPPPPPVKLRSFTRPSELTSGDGQFSKSNSVSSGEQFVSIGSSTSPSRVSSTEFINPYGINSSSQTQNDSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDDFMTPDFDGPDFFGCQSEDKFILNSETENQQDDSRDLRYNFEEIQLDGNEGYIDKSMEQCLCNHSSGGDENATYSKDYCHGVQKDTVAHNCEVPFCKSSPGSGGSCSEDPMNFSYLNLKEIKLNLNDFHMKDINSFESVPVLTMKHSSDCYKDPYDLTIEVVETDLPNGIESYGVRDDRDLSEELHVPEVTADEEDNNTDDDLLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNSVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQLITRQCLEALQYLHNLGIVHCDLKPENVLIKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFINEETDQLEYIIPEETSFEHHLQVTDTMFIDFVSYLLNVNPKRRPTARQALKHPWLSHVYKSM*