AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG028815

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028815 MtrunA17_Chr5g0437321 88.963 299 20 3 1 297 1 288 1.26e-175 486
MsaG028815 MtrunA17_Chr4g0053431 74.038 104 27 0 21 124 2 105 2.93e-52 172
MsaG028815 MtrunA17_Chr5g0401731 38.742 302 143 8 21 290 12 303 6.39e-52 173
MsaG028815 MtrunA17_Chr3g0133601 71.154 104 30 0 21 124 34 137 5.10e-51 167
MsaG028815 MtrunA17_Chr4g0008551 73.786 103 27 0 22 124 36 138 2.64e-50 169
MsaG028815 MtrunA17_Chr6g0454921 68.269 104 33 0 21 124 12 115 7.57e-48 159
MsaG028815 MtrunA17_Chr3g0125801 48.696 115 59 0 11 125 3 117 1.03e-34 127
MsaG028815 MtrunA17_Chr3g0139671 39.053 169 90 3 19 174 80 248 8.24e-34 130
MsaG028815 MtrunA17_Chr6g0480581 51.961 102 49 0 24 125 4 105 1.65e-33 122
MsaG028815 MtrunA17_Chr5g0417621 47.899 119 59 1 9 124 116 234 1.26e-32 124
MsaG028815 MtrunA17_Chr6g0460671 46.847 111 59 0 23 133 98 208 1.52e-32 123
MsaG028815 MtrunA17_Chr3g0117511 52.885 104 49 0 23 126 182 285 2.14e-32 124
MsaG028815 MtrunA17_Chr7g0238631 50.000 106 53 0 19 124 108 213 3.54e-32 125
MsaG028815 MtrunA17_Chr1g0157731 49.057 106 54 0 19 124 86 191 3.65e-32 125
MsaG028815 MtrunA17_Chr6g0460661 43.363 113 64 0 13 125 5 117 7.93e-32 116
MsaG028815 MtrunA17_Chr4g0042501 45.528 123 64 1 5 124 83 205 2.97e-31 120
MsaG028815 MtrunA17_Chr7g0254261 50.980 102 50 0 24 125 89 190 1.04e-30 118
MsaG028815 MtrunA17_Chr4g0058991 51.923 104 50 0 23 126 208 311 1.50e-30 119
MsaG028815 MtrunA17_Chr5g0397841 47.321 112 59 0 19 130 105 216 4.37e-30 118
MsaG028815 MtrunA17_Chr7g0228531 50.962 104 50 1 23 126 219 321 4.76e-30 117
MsaG028815 MtrunA17_Chr5g0429661 47.115 104 55 0 23 126 121 224 1.64e-29 115
MsaG028815 MtrunA17_Chr5g0417821 41.791 134 75 2 24 156 9 140 1.72e-29 113
MsaG028815 MtrunA17_Chr8g0349261 44.715 123 62 4 24 143 15 134 6.25e-29 112
MsaG028815 MtrunA17_Chr3g0103281 40.741 135 76 3 21 153 10 142 1.50e-28 111
MsaG028815 MtrunA17_Chr1g0180391 46.729 107 54 2 20 124 17 122 1.18e-27 107
MsaG028815 MtrunA17_Chr8g0385321 45.833 120 59 3 24 138 14 132 2.17e-27 108
MsaG028815 MtrunA17_Chr8g0354661 41.892 148 73 5 24 169 39 175 3.02e-27 110
MsaG028815 MtrunA17_Chr5g0410961 44.800 125 63 4 17 139 8 128 5.40e-27 107
MsaG028815 MtrunA17_Chr7g0228481 51.000 100 48 1 23 122 219 317 6.67e-27 108
MsaG028815 MtrunA17_Chr2g0281071 42.735 117 64 2 24 139 15 129 8.11e-27 107
MsaG028815 MtrunA17_Chr3g0131121 39.437 142 71 4 24 151 14 154 9.52e-27 106
MsaG028815 MtrunA17_Chr3g0088461 50.980 102 49 1 24 124 24 125 1.07e-26 107
MsaG028815 MtrunA17_Chr4g0022881 47.706 109 53 3 17 123 8 114 1.23e-26 104
MsaG028815 MtrunA17_Chr4g0048511 42.623 122 66 3 19 139 11 129 1.47e-26 107
MsaG028815 MtrunA17_Chr8g0334881 50.943 106 48 3 24 127 12 115 1.84e-26 105
MsaG028815 MtrunA17_Chr5g0395281 38.509 161 87 5 17 169 8 164 2.25e-26 105
MsaG028815 MtrunA17_Chr4g0044421 45.714 105 56 1 21 124 11 115 2.45e-26 102
MsaG028815 MtrunA17_Chr3g0099131 47.573 103 53 1 24 125 43 145 3.01e-26 108
MsaG028815 MtrunA17_Chr4g0013361 46.218 119 62 2 18 134 6 124 3.45e-26 104
MsaG028815 MtrunA17_Chr7g0217741 41.463 123 69 2 24 145 14 134 3.49e-26 105
MsaG028815 MtrunA17_Chr5g0435101 47.059 102 53 1 24 124 13 114 4.40e-26 102
MsaG028815 MtrunA17_Chr5g0440781 44.444 117 60 3 21 135 11 124 4.56e-26 101
MsaG028815 MtrunA17_Chr2g0328771 46.429 112 59 1 24 134 22 133 4.97e-26 104
MsaG028815 MtrunA17_Chr4g0032401 43.548 124 69 1 12 134 7 130 5.30e-26 105
MsaG028815 MtrunA17_Chr1g0193801 45.833 120 59 3 24 138 14 132 6.09e-26 105
MsaG028815 MtrunA17_Chr1g0193371 50.485 103 48 2 24 124 14 115 7.26e-26 105
MsaG028815 MtrunA17_Chr3g0080861 44.203 138 68 5 4 134 14 149 8.03e-26 106
MsaG028815 MtrunA17_Chr4g0030881 41.176 119 62 2 24 134 9 127 8.38e-26 102
MsaG028815 MtrunA17_Chr3g0115821 34.940 166 101 5 17 180 8 168 1.14e-25 104
MsaG028815 MtrunA17_Chr4g0022891 41.985 131 65 4 17 138 8 136 1.42e-25 102
MsaG028815 MtrunA17_Chr2g0323411 43.548 124 66 3 17 139 8 128 1.54e-25 103
MsaG028815 MtrunA17_Chr7g0254411 45.536 112 60 1 24 134 14 125 1.60e-25 103
MsaG028815 MtrunA17_Chr4g0068061 50.000 102 50 1 24 124 14 115 1.99e-25 103
MsaG028815 MtrunA17_Chr7g0270891 45.833 120 59 3 24 138 14 132 2.00e-25 103
MsaG028815 MtrunA17_Chr5g0441131 44.444 117 60 3 21 135 8 121 2.13e-25 100
MsaG028815 MtrunA17_Chr4g0039971 44.882 127 64 4 17 141 9 131 2.48e-25 103
MsaG028815 MtrunA17_Chr4g0037141 43.333 120 62 3 24 138 14 132 2.57e-25 102
MsaG028815 MtrunA17_Chr1g0203411 46.078 102 54 1 24 124 14 115 3.62e-25 102
MsaG028815 MtrunA17_Chr6g0452271 40.323 124 68 4 24 145 14 133 4.60e-25 102
MsaG028815 MtrunA17_Chr8g0387421 48.624 109 52 3 19 124 8 115 4.70e-25 102
MsaG028815 MtrunA17_Chr5g0440761 44.444 117 60 3 21 135 11 124 4.71e-25 101
MsaG028815 MtrunA17_Chr5g0441141 44.444 117 60 3 21 135 11 124 4.90e-25 101
MsaG028815 MtrunA17_Chr1g0186061 46.602 103 52 2 24 124 22 123 5.84e-25 100
MsaG028815 MtrunA17_Chr4g0058631 38.750 160 88 5 24 176 14 170 6.30e-25 102
MsaG028815 MtrunA17_Chr1g0168661 45.631 103 53 2 24 124 23 124 6.47e-25 100
MsaG028815 MtrunA17_Chr4g0022911 46.602 103 52 2 24 124 15 116 1.09e-24 100
MsaG028815 MtrunA17_Chr2g0309911 44.660 103 54 2 24 124 13 114 1.20e-24 100
MsaG028815 MtrunA17_Chr4g0022901 45.631 103 53 2 24 124 15 116 1.25e-24 100
MsaG028815 MtrunA17_Chr4g0055981 40.517 116 64 3 24 137 57 169 1.59e-24 99.0
MsaG028815 MtrunA17_Chr2g0330041 46.789 109 54 3 19 124 8 115 2.30e-24 101
MsaG028815 MtrunA17_Chr2g0327821 44.660 103 54 2 24 124 8 109 2.84e-24 98.2
MsaG028815 MtrunA17_Chr5g0397231 50.962 104 47 3 19 119 8 110 2.99e-24 100
MsaG028815 MtrunA17_Chr4g0057031 40.678 118 65 3 24 139 14 128 4.12e-24 98.6
MsaG028815 MtrunA17_Chr7g0247131 48.980 98 45 3 50 145 5 99 4.88e-24 98.6
MsaG028815 MtrunA17_Chr8g0342541 41.353 133 73 4 19 148 8 138 4.96e-24 99.8
MsaG028815 MtrunA17_Chr4g0022931 44.660 103 54 2 24 124 15 116 5.38e-24 98.6
MsaG028815 MtrunA17_Chr1g0151941 40.299 134 71 5 21 146 10 142 6.13e-24 97.8
MsaG028815 MtrunA17_Chr3g0135311 46.602 103 53 2 24 124 14 116 6.16e-24 99.8
MsaG028815 MtrunA17_Chr6g0453471 41.463 123 66 3 21 139 8 128 6.53e-24 99.8
MsaG028815 MtrunA17_Chr1g0177901 41.129 124 64 1 35 149 5 128 6.86e-24 96.7
MsaG028815 MtrunA17_Chr1g0211161 41.667 120 65 3 24 141 15 131 6.95e-24 97.1
MsaG028815 MtrunA17_Chr1g0154031 47.273 110 54 3 24 130 78 186 9.49e-24 100
MsaG028815 MtrunA17_Chr3g0117091 41.463 123 67 3 24 144 14 133 9.84e-24 99.0
MsaG028815 MtrunA17_Chr7g0228891 41.129 124 65 4 21 139 8 128 1.04e-23 97.8
MsaG028815 MtrunA17_Chr7g0275911 44.118 102 56 1 24 124 14 115 1.13e-23 97.1
MsaG028815 MtrunA17_Chr1g0194951 40.625 128 70 3 24 149 14 137 1.46e-23 99.0
MsaG028815 MtrunA17_Chr8g0342521 47.706 109 53 3 19 124 8 115 1.76e-23 98.6
MsaG028815 MtrunA17_Chr4g0042671 41.026 117 66 2 24 139 14 128 1.78e-23 99.0
MsaG028815 MtrunA17_Chr8g0343831 42.991 107 60 1 24 129 10 116 2.21e-23 96.3
MsaG028815 MtrunA17_Chr7g0233061 46.000 100 52 1 23 122 179 276 3.70e-23 97.8
MsaG028815 MtrunA17_Chr7g0274581 41.284 109 61 2 24 130 14 121 5.40e-23 94.4
MsaG028815 MtrunA17_Chr4g0060721 46.078 102 54 1 24 124 15 116 5.44e-23 96.7
MsaG028815 MtrunA17_Chr8g0346561 45.098 102 55 1 24 124 14 115 8.22e-23 95.9
MsaG028815 MtrunA17_Chr3g0110351 40.496 121 64 4 21 136 8 125 9.44e-23 95.9
MsaG028815 MtrunA17_Chr2g0323351 44.037 109 57 3 17 123 8 114 1.02e-22 94.4
MsaG028815 MtrunA17_Chr5g0400821 44.660 103 55 2 24 124 14 116 1.34e-22 95.5
MsaG028815 MtrunA17_Chr1g0203441 44.860 107 56 2 24 128 15 120 1.88e-22 94.4
MsaG028815 MtrunA17_Chr7g0228231 42.478 113 62 2 18 128 10 121 2.05e-22 92.8
MsaG028815 MtrunA17_Chr5g0434571 38.462 130 72 4 15 139 38 164 2.08e-22 95.5
MsaG028815 MtrunA17_Chr3g0092401 46.078 102 54 1 24 124 15 116 2.20e-22 94.7
MsaG028815 MtrunA17_Chr2g0322521 44.167 120 66 1 24 142 31 150 2.51e-22 95.9
MsaG028815 MtrunA17_Chr1g0209661 38.938 113 66 2 14 124 19 130 2.81e-22 94.4
MsaG028815 MtrunA17_Chr7g0228401 51.136 88 43 0 35 122 290 377 2.85e-22 96.3
MsaG028815 MtrunA17_Chr1g0167691 44.118 102 56 1 24 124 14 115 2.97e-22 93.2
MsaG028815 MtrunA17_Chr7g0217221 43.636 110 58 3 17 124 8 115 3.47e-22 93.6
MsaG028815 MtrunA17_Chr1g0187761 43.689 103 55 2 24 124 14 115 4.05e-22 93.2
MsaG028815 MtrunA17_Chr7g0261281 44.660 103 54 2 24 124 14 115 4.41e-22 93.2
MsaG028815 MtrunA17_Chr6g0453211 46.154 104 54 2 17 119 8 110 5.38e-22 94.0
MsaG028815 MtrunA17_Chr4g0072751 48.980 98 48 2 24 119 14 111 5.98e-22 94.4
MsaG028815 MtrunA17_Chr1g0152011 44.660 103 55 2 24 124 14 116 6.06e-22 94.0
MsaG028815 MtrunA17_Chr1g0167661 43.137 102 57 1 24 124 14 115 6.14e-22 92.4
MsaG028815 MtrunA17_Chr7g0271241 49.485 97 46 2 24 118 14 109 7.66e-22 94.4
MsaG028815 MtrunA17_Chr8g0342481 44.545 110 56 4 19 124 8 116 1.47e-21 93.6
MsaG028815 MtrunA17_Chr6g0470971 42.056 107 59 2 24 128 16 121 2.16e-21 91.7
MsaG028815 MtrunA17_Chr6g0487491 41.667 120 60 3 24 133 14 133 2.55e-21 90.9
MsaG028815 MtrunA17_Chr3g0121241 41.748 103 57 2 24 124 44 145 4.67e-21 90.9
MsaG028815 MtrunA17_Chr6g0450101 42.157 102 58 1 24 124 16 117 6.18e-21 88.6
MsaG028815 MtrunA17_Chr7g0264641 34.328 134 86 2 24 155 14 147 9.31e-21 89.7
MsaG028815 MtrunA17_Chr4g0028311 42.453 106 59 2 24 127 14 119 1.06e-20 90.5
MsaG028815 MtrunA17_Chr1g0192411 42.982 114 64 1 12 124 2 115 1.08e-20 91.3
MsaG028815 MtrunA17_Chr2g0311221 45.918 98 50 2 24 119 16 112 2.25e-20 89.4
MsaG028815 MtrunA17_Chr4g0054391 45.361 97 51 2 24 118 14 110 3.69e-20 88.2
MsaG028815 MtrunA17_Chr4g0070641 42.000 100 55 2 24 121 14 112 3.96e-20 85.5
MsaG028815 MtrunA17_Chr4g0070611 34.307 137 80 3 24 155 14 145 6.54e-20 87.8
MsaG028815 MtrunA17_Chr4g0068921 38.655 119 72 1 6 123 8 126 7.50e-20 85.5
MsaG028815 MtrunA17_Chr5g0434911 37.615 109 59 2 24 127 23 127 8.82e-20 87.0
MsaG028815 MtrunA17_Chr2g0327351 45.918 98 51 2 24 119 14 111 1.03e-19 87.4
MsaG028815 MtrunA17_Chr7g0269831 49.020 102 51 1 24 124 14 115 1.75e-19 87.4
MsaG028815 MtrunA17_Chr5g0434831 37.736 106 57 2 24 124 9 110 2.28e-19 84.0
MsaG028815 MtrunA17_Chr1g0194291 43.396 106 58 2 14 117 12 117 2.74e-19 85.5
MsaG028815 MtrunA17_Chr5g0434931 35.780 109 61 2 24 127 37 141 4.00e-19 85.1
MsaG028815 MtrunA17_Chr1g0194301 43.750 96 51 2 24 117 35 129 4.04e-19 85.1
MsaG028815 MtrunA17_Chr8g0360111 41.748 103 51 2 24 121 27 125 4.72e-19 84.7
MsaG028815 MtrunA17_Chr5g0434841 38.679 106 56 2 24 124 22 123 1.03e-18 84.7
MsaG028815 MtrunA17_Chr7g0220341 37.963 108 56 2 24 124 27 130 1.09e-18 84.0
MsaG028815 MtrunA17_Chr3g0093811 41.573 89 50 1 57 145 18 104 1.60e-18 83.2
MsaG028815 MtrunA17_Chr2g0293911 41.129 124 69 3 3 124 6 127 4.97e-18 82.8
MsaG028815 MtrunA17_Chr7g0228991 37.255 102 63 1 24 124 31 132 8.58e-18 81.3
MsaG028815 MtrunA17_Chr7g0240821 37.500 104 62 2 26 127 5 107 8.78e-18 80.5
MsaG028815 MtrunA17_Chr3g0099141 43.373 83 46 1 24 105 42 124 3.31e-17 76.6
MsaG028815 MtrunA17_Chr8g0362231 35.000 100 64 1 26 125 24 122 4.50e-17 80.9
MsaG028815 MtrunA17_Chr5g0416341 30.189 106 74 0 26 131 28 133 7.51e-17 80.5
MsaG028815 MtrunA17_Chr5g0425591 42.857 84 46 2 21 102 8 91 3.18e-15 70.1
MsaG028815 MtrunA17_Chr7g0233151 65.217 46 16 0 79 124 6 51 1.36e-14 70.5
MsaG028815 MtrunA17_Chr5g0434901 44.776 67 37 0 56 122 8 74 1.75e-14 68.6
MsaG028815 MtrunA17_Chr7g0229101 46.970 66 35 0 57 122 8 73 2.31e-14 70.5
MsaG028815 MtrunA17_Chr4g0042611 42.105 76 41 2 24 97 14 88 3.28e-14 67.0
MsaG028815 MtrunA17_Chr6g0453751 36.937 111 59 4 2 102 1 110 4.58e-14 67.8
MsaG028815 MtrunA17_Chr2g0323321 38.000 100 58 3 17 114 7 104 1.56e-13 65.9
MsaG028815 MtrunA17_Chr7g0229131 43.284 67 38 0 57 123 8 74 1.68e-13 67.4
MsaG028815 MtrunA17_Chr2g0294811 40.476 84 47 2 24 105 14 96 6.70e-13 64.3
MsaG028815 MtrunA17_Chr7g0238651 36.364 99 60 1 22 117 5 103 6.79e-13 68.2
MsaG028815 MtrunA17_Chr5g0395221 43.421 76 40 2 24 97 14 88 1.45e-12 62.4
MsaG028815 MtrunA17_Chr8g0342511 43.210 81 42 3 19 96 8 87 2.98e-12 62.0
MsaG028815 MtrunA17_Chr7g0233161 44.615 65 36 0 11 75 286 350 5.52e-12 65.5
MsaG028815 MtrunA17_Chr8g0342531 42.169 83 44 3 19 98 8 89 1.33e-11 62.0
MsaG028815 MtrunA17_Chr3g0104501 49.057 53 27 0 23 75 132 184 1.72e-11 62.4
MsaG028815 MtrunA17_Chr3g0104491 42.188 64 37 0 83 146 26 89 4.24e-11 62.4
MsaG028815 MtrunA17_Chr8g0342461 31.496 127 62 5 24 147 14 118 5.69e-11 59.7
MsaG028815 MtrunA17_Chr4g0046181 49.057 53 27 0 23 75 220 272 1.00e-10 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG028815 AT3G50060.1 65.812 117 39 1 20 136 2 117 7.00e-50 167
MsaG028815 AT3G09230.1 71.154 104 30 0 21 124 52 155 7.43e-48 164
MsaG028815 AT3G55730.1 70.874 103 30 0 22 124 54 156 1.58e-47 164
MsaG028815 AT5G67300.1 69.231 104 32 0 21 124 3 106 3.36e-47 160
MsaG028815 AT4G37260.1 68.224 107 34 0 18 124 7 113 3.57e-47 161
MsaG028815 AT2G23290.1 70.192 104 31 0 21 124 10 113 7.29e-47 160
MsaG028815 AT2G39880.1 52.667 150 64 3 8 153 37 183 6.62e-46 159
MsaG028815 AT1G73410.1 51.852 108 50 1 24 129 6 113 3.19e-34 125
MsaG028815 AT1G73410.2 53.465 101 47 0 24 124 6 106 3.59e-34 124
MsaG028815 AT1G17950.1 50.495 101 50 0 24 124 5 105 1.44e-33 123
MsaG028815 AT5G17800.1 54.455 101 46 0 24 124 93 193 5.07e-33 124
MsaG028815 AT3G09370.2 44.776 134 70 1 19 152 130 259 5.42e-33 127
MsaG028815 AT3G09370.3 44.776 134 70 1 19 152 138 267 5.55e-33 127
MsaG028815 AT3G09370.1 44.776 134 70 1 19 152 125 254 6.01e-33 127
MsaG028815 AT4G33450.1 50.000 102 51 0 24 125 19 120 9.34e-33 121
MsaG028815 AT5G02320.3 50.000 106 53 0 19 124 62 167 1.31e-32 125
MsaG028815 AT5G02320.1 50.000 106 53 0 19 124 122 227 1.86e-32 126
MsaG028815 AT5G02320.2 50.000 106 53 0 19 124 122 227 1.86e-32 126
MsaG028815 AT1G69560.1 44.531 128 58 2 24 140 107 232 3.17e-31 119
MsaG028815 AT4G32730.5 49.057 106 54 0 19 124 82 187 4.42e-31 123
MsaG028815 AT4G32730.4 49.057 106 54 0 19 124 82 187 4.42e-31 123
MsaG028815 AT4G32730.3 49.057 106 54 0 19 124 82 187 4.42e-31 123
MsaG028815 AT4G32730.2 49.057 106 54 0 19 124 82 187 4.42e-31 123
MsaG028815 AT1G69560.2 42.336 137 66 2 15 140 114 248 4.50e-31 119
MsaG028815 AT5G11050.1 48.077 104 54 0 23 126 104 207 4.73e-31 120
MsaG028815 AT4G32730.1 49.057 106 54 0 19 124 82 187 4.85e-31 122
MsaG028815 AT5G11510.3 45.283 106 58 0 19 124 76 181 7.10e-31 122
MsaG028815 AT5G11510.1 45.283 106 58 0 19 124 76 181 7.10e-31 122
MsaG028815 AT5G11510.4 45.283 106 58 0 19 124 76 181 7.10e-31 122
MsaG028815 AT5G11510.2 45.283 106 58 0 19 124 76 181 9.41e-31 122
MsaG028815 AT5G11510.5 45.283 106 58 0 19 124 76 181 1.03e-30 122
MsaG028815 AT5G58850.1 47.059 102 54 0 23 124 104 205 1.13e-30 119
MsaG028815 AT4G18770.1 50.980 102 50 0 23 124 216 317 1.99e-30 119
MsaG028815 AT1G26780.1 49.505 101 51 0 24 124 98 198 2.82e-30 115
MsaG028815 AT1G26780.2 49.505 101 51 0 24 124 98 198 6.76e-30 116
MsaG028815 AT5G40360.1 47.368 114 57 1 24 134 158 271 2.20e-29 115
MsaG028815 AT4G00540.2 51.376 109 50 1 24 129 103 211 3.65e-29 115
MsaG028815 AT5G56110.1 40.458 131 75 2 24 153 14 142 5.35e-29 113
MsaG028815 AT4G00540.1 51.376 109 50 1 24 129 101 209 7.69e-29 114
MsaG028815 AT3G27785.1 50.000 104 52 0 23 126 188 291 9.12e-29 114
MsaG028815 AT1G74430.1 45.455 121 63 2 24 143 14 132 1.53e-28 110
MsaG028815 AT4G26930.1 47.581 124 58 3 14 130 6 129 2.20e-28 112
MsaG028815 AT3G29020.1 46.535 101 54 0 24 124 65 165 3.63e-28 108
MsaG028815 AT4G28110.1 45.161 124 64 3 17 139 8 128 4.01e-28 110
MsaG028815 AT3G61250.1 42.748 131 69 4 24 151 14 141 5.82e-28 110
MsaG028815 AT3G53200.1 49.057 106 51 2 24 127 11 115 7.31e-28 108
MsaG028815 AT3G08500.1 48.276 116 58 2 11 124 18 133 8.39e-28 110
MsaG028815 AT3G29020.2 46.535 101 54 0 24 124 67 167 9.25e-28 109
MsaG028815 AT2G32460.1 49.057 106 53 1 24 128 20 125 2.58e-27 111
MsaG028815 AT2G32460.2 49.057 106 53 1 24 128 8 113 2.79e-27 110
MsaG028815 AT5G06100.1 39.130 138 73 2 1 127 1 138 4.88e-27 110
MsaG028815 AT3G11440.2 46.667 105 55 1 24 127 43 147 9.50e-27 109
MsaG028815 AT5G06100.5 38.849 139 74 2 1 128 1 139 1.07e-26 109
MsaG028815 AT5G06100.2 38.849 139 74 2 1 128 1 139 1.07e-26 109
MsaG028815 AT5G06100.3 38.849 139 74 2 1 128 1 139 1.07e-26 109
MsaG028815 AT5G06100.4 38.849 139 74 2 1 128 1 139 1.07e-26 109
MsaG028815 AT4G38620.1 46.154 117 57 3 24 135 14 129 1.19e-26 106
MsaG028815 AT5G12870.1 49.020 102 51 1 24 124 20 121 1.29e-26 105
MsaG028815 AT1G18710.1 42.857 119 65 2 24 141 14 130 1.72e-26 105
MsaG028815 AT3G11440.3 46.667 105 55 1 24 127 43 147 1.78e-26 109
MsaG028815 AT3G11440.4 46.667 105 55 1 24 127 43 147 1.78e-26 109
MsaG028815 AT3G11440.1 46.667 105 55 1 24 127 43 147 1.78e-26 109
MsaG028815 AT5G10280.1 44.000 125 64 4 17 139 8 128 2.09e-26 106
MsaG028815 AT1G35515.1 33.714 175 96 4 24 178 14 188 2.30e-26 103
MsaG028815 AT5G55020.1 51.485 101 48 1 24 123 28 128 2.55e-26 108
MsaG028815 AT3G46130.1 44.167 120 63 3 18 135 6 123 2.61e-26 104
MsaG028815 AT4G34990.1 44.444 117 59 3 24 135 14 129 3.18e-26 104
MsaG028815 AT2G16720.1 45.217 115 58 3 24 136 14 125 3.40e-26 104
MsaG028815 AT5G59780.3 42.982 114 62 2 24 135 10 122 3.40e-26 103
MsaG028815 AT3G30210.1 45.794 107 55 2 24 128 29 134 3.55e-26 104
MsaG028815 AT4G05100.1 43.089 123 66 3 18 139 10 129 3.57e-26 105
MsaG028815 AT4G01680.3 45.833 120 59 3 24 138 14 132 4.62e-26 103
MsaG028815 AT5G14750.1 43.478 115 62 2 12 124 6 119 4.99e-26 102
MsaG028815 AT2G26960.1 45.968 124 60 4 13 130 8 130 5.47e-26 106
MsaG028815 AT5G16770.4 40.000 145 79 5 17 159 8 146 5.51e-26 105
MsaG028815 AT5G16770.3 40.000 145 79 5 17 159 8 146 5.51e-26 105
MsaG028815 AT5G60890.1 46.602 103 52 2 24 124 14 115 7.65e-26 104
MsaG028815 AT5G16770.1 44.000 125 64 4 17 139 8 128 8.18e-26 105
MsaG028815 AT5G16770.2 44.000 125 64 4 17 139 8 128 8.18e-26 105
MsaG028815 AT1G18570.1 44.348 115 59 3 24 136 15 126 8.36e-26 105
MsaG028815 AT4G21440.1 42.742 124 67 3 17 139 8 128 1.04e-25 105
MsaG028815 AT1G74080.1 45.098 102 53 2 24 123 14 114 1.20e-25 104
MsaG028815 AT4G09460.1 48.544 103 50 2 24 124 14 115 1.33e-25 102
MsaG028815 AT1G09540.1 45.000 120 60 3 24 138 14 132 1.61e-25 104
MsaG028815 AT5G07690.1 44.068 118 61 3 24 139 14 128 1.79e-25 103
MsaG028815 AT4G17785.2 38.889 144 77 4 17 152 8 148 1.88e-25 104
MsaG028815 AT1G57560.2 44.068 118 61 3 24 139 14 128 2.16e-25 102
MsaG028815 AT4G01680.1 45.833 120 59 3 24 138 14 132 2.26e-25 103
MsaG028815 AT5G52600.1 41.353 133 68 4 24 147 14 145 2.28e-25 100
MsaG028815 AT5G61420.2 42.623 122 65 3 24 143 14 132 2.29e-25 104
MsaG028815 AT3G13890.2 39.552 134 77 3 19 149 8 140 2.42e-25 103
MsaG028815 AT1G57560.1 44.068 118 61 3 24 139 14 128 2.58e-25 103
MsaG028815 AT1G22640.1 46.602 103 52 2 24 124 14 115 3.19e-25 101
MsaG028815 AT3G60460.1 49.057 106 50 3 24 127 13 116 3.30e-25 102
MsaG028815 AT4G17785.1 38.889 144 77 4 17 152 8 148 3.76e-25 103
MsaG028815 AT5G07700.1 40.299 134 69 3 24 147 14 146 3.86e-25 103
MsaG028815 AT5G07700.2 40.299 134 69 3 24 147 14 146 3.86e-25 103
MsaG028815 AT4G13480.1 46.602 103 52 2 24 124 8 109 4.85e-25 101
MsaG028815 AT3G02940.2 42.400 125 66 4 17 139 8 128 5.14e-25 102
MsaG028815 AT2G25230.1 41.071 112 66 0 24 135 26 137 5.71e-25 100
MsaG028815 AT1G08810.1 49.020 102 51 1 24 124 14 115 6.84e-25 101
MsaG028815 AT5G26660.1 40.278 144 78 4 24 160 14 156 6.98e-25 102
MsaG028815 AT3G02940.1 42.400 125 66 4 17 139 8 128 7.22e-25 102
MsaG028815 AT3G02940.3 42.400 125 66 4 17 139 8 128 7.22e-25 102
MsaG028815 AT3G28470.1 44.068 118 61 3 24 139 14 128 7.82e-25 102
MsaG028815 AT1G56160.1 47.706 109 53 3 21 126 12 119 8.21e-25 101
MsaG028815 AT5G65230.1 42.400 125 66 4 17 139 8 128 8.74e-25 101
MsaG028815 AT1G25340.1 40.496 121 69 2 6 124 2 121 8.96e-25 101
MsaG028815 AT5G40330.1 38.235 136 76 3 24 157 14 143 1.12e-24 99.4
MsaG028815 AT3G48920.1 49.020 102 49 2 24 123 20 120 1.78e-24 99.8
MsaG028815 AT1G63910.1 48.148 108 54 2 19 124 8 115 2.05e-24 101
MsaG028815 AT3G13890.1 38.028 142 77 3 19 149 8 149 2.22e-24 101
MsaG028815 AT5G54230.1 41.176 119 67 2 24 141 14 130 2.37e-24 100
MsaG028815 AT3G12720.1 45.631 103 53 2 24 124 24 125 2.91e-24 100
MsaG028815 AT5G15310.1 41.880 117 65 2 24 139 14 128 3.19e-24 100
MsaG028815 AT5G15310.2 41.880 117 65 2 24 139 14 128 3.37e-24 100
MsaG028815 AT1G25340.2 39.496 119 68 1 6 124 2 116 3.50e-24 99.4
MsaG028815 AT1G25340.3 39.496 119 68 1 6 124 2 116 3.66e-24 100
MsaG028815 AT3G27920.1 36.879 141 82 3 18 152 10 149 4.19e-24 98.2
MsaG028815 AT5G15310.4 41.880 117 65 2 24 139 14 128 4.67e-24 98.2
MsaG028815 AT1G16490.1 44.762 105 57 1 24 127 16 120 6.27e-24 98.6
MsaG028815 AT3G24310.1 45.631 103 53 2 24 124 20 121 6.60e-24 98.6
MsaG028815 AT3G01140.2 42.982 114 62 2 24 136 14 125 7.96e-24 99.8
MsaG028815 AT4G01680.2 41.667 132 59 3 24 138 14 144 1.12e-23 99.4
MsaG028815 AT3G01140.1 42.982 114 62 2 24 136 57 168 1.19e-23 99.8
MsaG028815 AT4G12350.1 39.831 118 66 3 24 139 14 128 1.42e-23 97.8
MsaG028815 AT1G34670.1 40.323 124 70 3 17 139 8 128 1.56e-23 99.4
MsaG028815 AT3G62610.1 46.078 102 54 1 24 124 14 115 2.25e-23 98.6
MsaG028815 AT1G06180.1 45.631 103 53 2 24 124 14 115 2.69e-23 96.3
MsaG028815 AT5G35550.1 45.631 103 53 2 24 124 16 117 3.47e-23 96.3
MsaG028815 AT3G13540.1 39.200 125 73 2 24 147 25 147 4.62e-23 95.9
MsaG028815 AT5G39700.1 42.424 99 57 0 25 123 57 155 5.70e-23 94.0
MsaG028815 AT5G62470.1 43.564 101 57 0 24 124 14 114 6.45e-23 97.4
MsaG028815 AT1G74650.1 46.078 102 54 1 24 124 14 115 7.18e-23 96.7
MsaG028815 AT3G23250.1 43.689 103 55 2 24 124 14 115 7.96e-23 95.9
MsaG028815 AT4G22680.1 39.831 118 66 3 24 139 14 128 1.02e-22 95.1
MsaG028815 AT3G12820.1 45.631 103 53 2 24 124 16 117 1.18e-22 94.4
MsaG028815 AT2G47190.1 42.500 120 63 3 7 124 8 123 1.27e-22 95.1
MsaG028815 AT1G66230.1 38.710 124 68 4 21 139 8 128 2.01e-22 94.7
MsaG028815 AT3G28910.1 44.954 109 58 2 17 124 8 115 2.58e-22 95.1
MsaG028815 AT1G79180.1 44.660 103 54 2 24 124 16 117 2.93e-22 94.4
MsaG028815 AT2G31180.1 43.137 102 57 1 24 124 14 115 3.20e-22 93.6
MsaG028815 AT5G14340.1 38.983 118 67 3 24 139 26 140 3.41e-22 94.0
MsaG028815 AT3G27810.1 43.443 122 61 3 24 143 22 137 3.42e-22 92.8
MsaG028815 AT3G53200.2 54.930 71 32 0 57 127 12 82 3.53e-22 92.4
MsaG028815 AT3G47600.1 45.098 102 55 1 24 124 14 115 3.76e-22 94.7
MsaG028815 AT5G62470.2 45.098 102 55 1 24 124 14 115 4.38e-22 95.1
MsaG028815 AT5G49330.1 45.045 111 59 2 24 133 14 123 6.22e-22 94.4
MsaG028815 AT4G37780.1 44.660 103 55 2 24 124 14 116 1.11e-21 93.2
MsaG028815 AT2G47460.1 35.036 137 77 2 24 148 14 150 1.21e-21 94.0
MsaG028815 AT5G16600.1 39.516 124 67 4 21 139 8 128 1.28e-21 93.2
MsaG028815 AT5G65790.1 44.660 103 55 2 24 124 14 116 1.84e-21 93.6
MsaG028815 AT5G40350.1 44.118 102 54 2 24 123 19 119 4.30e-21 89.7
MsaG028815 AT4G25560.1 43.689 103 55 2 24 124 12 113 4.47e-21 90.9
MsaG028815 AT5G52260.1 44.660 103 54 2 24 124 14 115 4.79e-21 90.5
MsaG028815 AT1G68320.1 40.777 103 58 2 24 124 21 122 4.98e-21 90.9
MsaG028815 AT2G26950.1 42.593 108 51 3 23 125 17 118 5.61e-21 92.4
MsaG028815 AT5G59780.2 44.211 95 49 1 41 135 11 101 6.35e-21 89.0
MsaG028815 AT3G01530.1 41.818 110 61 2 17 124 20 128 8.16e-21 88.6
MsaG028815 AT3G49690.1 43.689 103 56 2 24 124 14 116 8.39e-21 90.9
MsaG028815 AT2G36890.1 41.667 120 58 4 24 140 14 124 1.32e-20 90.1
MsaG028815 AT5G23000.1 37.857 140 75 5 24 153 14 151 1.35e-20 90.5
MsaG028815 AT3G46130.4 48.101 79 41 0 57 135 23 101 1.80e-20 88.6
MsaG028815 AT2G36890.2 41.667 120 58 4 24 140 55 165 1.87e-20 90.1
MsaG028815 AT5G40430.1 41.346 104 60 1 20 123 50 152 2.03e-20 88.6
MsaG028815 AT3G46130.3 48.101 79 41 0 57 135 13 91 2.45e-20 87.8
MsaG028815 AT5G57620.1 43.689 103 56 2 24 124 14 116 2.52e-20 89.7
MsaG028815 AT5G26660.2 42.202 109 58 2 57 160 17 125 6.05e-20 88.6
MsaG028815 AT5G14750.3 51.471 68 33 0 57 124 18 85 9.32e-20 84.7
MsaG028815 AT1G48000.1 40.594 101 59 1 24 123 34 134 2.98e-19 85.1
MsaG028815 AT3G27810.2 49.425 87 39 1 57 143 7 88 1.30e-18 82.0
MsaG028815 AT5G62320.1 40.541 111 54 3 24 124 15 123 1.47e-18 83.6
MsaG028815 AT2G02820.3 33.019 106 71 0 26 131 32 137 4.21e-18 83.6
MsaG028815 AT1G79180.2 34.074 135 55 1 24 124 16 150 4.77e-18 83.2
MsaG028815 AT3G12820.2 52.941 68 32 0 57 124 2 69 5.31e-18 80.5
MsaG028815 AT5G35550.2 54.412 68 31 0 57 124 53 120 7.31e-18 81.6
MsaG028815 AT2G02820.1 33.019 106 71 0 26 131 32 137 1.32e-17 83.2
MsaG028815 AT2G02820.2 33.019 106 71 0 26 131 32 137 1.84e-17 82.8
MsaG028815 AT1G14350.2 34.343 99 65 0 26 124 27 125 2.37e-17 82.4
MsaG028815 AT1G14350.1 34.343 99 65 0 26 124 27 125 2.37e-17 82.4
MsaG028815 AT5G40350.2 52.239 67 32 0 57 123 8 74 2.50e-17 78.2
MsaG028815 AT3G06490.1 41.509 106 59 2 21 124 18 122 3.05e-17 80.9
MsaG028815 AT1G66380.1 32.824 131 78 3 24 148 10 136 1.23e-16 75.5
MsaG028815 AT1G66370.1 35.849 106 59 2 24 124 10 111 1.38e-16 77.8
MsaG028815 AT5G49620.1 38.532 109 66 1 17 124 21 129 2.59e-16 78.2
MsaG028815 AT3G47600.2 48.529 68 35 0 57 124 42 109 5.76e-16 77.4
MsaG028815 AT1G56650.1 31.111 135 78 3 24 147 10 140 8.12e-15 73.2
MsaG028815 AT3G18100.3 40.426 94 56 0 24 117 498 591 1.00e-14 75.1
MsaG028815 AT3G18100.1 40.426 94 56 0 24 117 546 639 1.05e-14 74.7
MsaG028815 AT3G18100.2 40.426 94 56 0 24 117 333 426 1.55e-14 74.3
MsaG028815 AT3G18100.4 40.426 94 56 0 24 117 385 478 1.65e-14 74.3
MsaG028815 AT1G66390.1 31.387 137 83 3 24 153 10 142 6.32e-14 70.5
MsaG028815 AT5G49620.2 34.146 123 66 2 17 124 21 143 6.49e-13 68.6
MsaG028815 AT1G71030.2 44.615 65 36 0 60 124 5 69 7.52e-13 66.2
MsaG028815 AT1G71030.1 44.615 65 36 0 60 124 19 83 8.90e-13 66.2
MsaG028815 AT1G66380.3 35.484 93 59 1 57 148 11 103 1.66e-12 63.2
MsaG028815 AT1G22640.3 49.123 57 29 0 68 124 2 58 2.17e-12 65.5
MsaG028815 AT5G14750.4 45.614 57 31 0 68 124 2 58 3.07e-12 63.5
MsaG028815 AT5G14750.2 45.614 57 31 0 68 124 2 58 3.07e-12 63.5
MsaG028815 AT1G18960.1 31.933 119 75 4 22 139 8 121 4.21e-12 65.9
MsaG028815 AT2G37630.1 35.354 99 61 1 22 117 2 100 6.66e-12 65.9
MsaG028815 AT5G59780.1 43.860 57 32 0 79 135 1 57 9.20e-12 62.8
MsaG028815 AT3G46130.2 45.614 57 31 0 79 135 1 57 1.10e-11 63.2
MsaG028815 AT3G23250.2 44.828 58 32 0 67 124 1 58 8.39e-11 61.2

Find 79 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACGACAGTGATTATTATA+AGG 0.303478 5:+69171840 MsaT028815.1:CDS
CACTTTCGAAGTGTTGAATC+AGG 0.309175 5:-69172207 None:intergenic
TTATCCTCCGCCGGTGTAAA+AGG 0.319601 5:-69171568 None:intergenic
AACGGAATCCCCGGTCGTTC+TGG 0.325808 5:+69171490 MsaT028815.1:CDS
TTATAAACGTCCTTGTGTTA+TGG 0.349334 5:+69171885 MsaT028815.1:CDS
ATTGAAGCACATGCAGTTCA+TGG 0.355261 5:+69171598 MsaT028815.1:CDS
ACGATTTCTCGTCTTCTTCC+AGG 0.363590 5:+69171634 MsaT028815.1:CDS
GCATGATAGCAGAGGAAGTT+AGG 0.373360 5:+69172145 MsaT028815.1:CDS
GATGATGACGCAGGGAATAA+AGG 0.383743 5:+69171964 MsaT028815.1:CDS
ACCACCGTTTGAATTCGAAT+TGG 0.391041 5:-69171359 None:intergenic
GTGATAAAGTGAAGGGTTCA+TGG 0.407783 5:+69171395 MsaT028815.1:CDS
AAGAAAACGGTGCAAGAAAC+TGG 0.412440 5:+69171455 MsaT028815.1:CDS
ATTACCACCGGTGTGATAAC+CGG 0.414354 5:+69171799 MsaT028815.1:CDS
ACCGGTGGAACCGTTGTAAC+CGG 0.417169 5:-69171736 None:intergenic
AGATGAAACATTGGTGAAAC+TGG 0.432466 5:+69171429 MsaT028815.1:CDS
CTTTGAACAACCGTTGCAAC+CGG 0.434972 5:-69171754 None:intergenic
ACGGAATCCCCGGTCGTTCT+GGG 0.435316 5:+69171491 MsaT028815.1:CDS
ATGCAGTTCATGGAAACAAA+TGG 0.435359 5:+69171608 MsaT028815.1:CDS
AACTCTCCGCCGTCGTCGCA+CGG 0.450623 5:+69171693 MsaT028815.1:CDS
GATAACATGCGCCTTGGTGG+TGG 0.451447 5:+69172177 MsaT028815.1:CDS
CGGTTGCAACGGTTGTTCAA+AGG 0.465093 5:+69171755 MsaT028815.1:CDS
GGTTGCAACGGTTGTTCAAA+GGG 0.473960 5:+69171756 MsaT028815.1:CDS
GGCTCCTGTAGCGGTTTCAC+CGG 0.488293 5:+69171717 MsaT028815.1:CDS
TATAAGGATTTGTTGAGTCT+CGG 0.499886 5:+69171856 MsaT028815.1:CDS
GCAAGACTTCCCAGAACGAC+CGG 0.501357 5:-69171500 None:intergenic
GTCACGTGACGGTGAAGAAA+CGG 0.504415 5:+69171933 MsaT028815.1:CDS
ACCGGTTACAACGGTTCCAC+CGG 0.509986 5:+69171735 MsaT028815.1:CDS
AACGGTTCCACCGGTTGCAA+CGG 0.511374 5:+69171744 MsaT028815.1:CDS
ATAAAGGTGTTAACGTGGTT+AGG 0.512437 5:+69171980 MsaT028815.1:CDS
AATTCCAATTCGAATTCAAA+CGG 0.513949 5:+69171355 MsaT028815.1:CDS
TGCAGTTCATGGAAACAAAT+GGG 0.515010 5:+69171609 MsaT028815.1:CDS
TCTTCTTCTTTCAGAAAACC+AGG 0.531221 5:-69172024 None:intergenic
CAGGAGCCGCCGTGCGACGA+CGG 0.534368 5:-69171702 None:intergenic
GTTGATAACATGCGCCTTGG+TGG 0.538563 5:+69172174 MsaT028815.1:CDS
CAAGACTTCCCAGAACGACC+GGG 0.539420 5:-69171499 None:intergenic
GGAAGTCTTGCCGTCTGCGG+TGG 0.545828 5:+69171512 MsaT028815.1:CDS
TCGTTAAGTTTGTTTCCACC+TGG 0.549818 5:+69172006 MsaT028815.1:CDS
GTGATAAGCAACGGAATCCC+CGG 0.556212 5:+69171481 MsaT028815.1:CDS
TGAACAACCGTTGCAACCGG+TGG 0.559619 5:-69171751 None:intergenic
GAGAATAATAGCGGGTCTCG+TGG 0.560141 5:+69171910 MsaT028815.1:CDS
ATAACATGCGCCTTGGTGGT+GGG 0.567081 5:+69172178 MsaT028815.1:CDS
AAAGGAAGGTGTTGAACGGT+TGG 0.567448 5:-69171550 None:intergenic
AGAATAATAGCGGGTCTCGT+GGG 0.570771 5:+69171911 MsaT028815.1:CDS
AATTCGAATTCAAACGGTGG+TGG 0.570811 5:+69171361 MsaT028815.1:CDS
ATCGCGTTATCTGTTCTACC+TGG 0.573592 5:-69171652 None:intergenic
GTAATCATCGGCACCGCCGT+TGG 0.573649 5:-69171781 None:intergenic
TCGCACGGCGGCTCCTGTAG+CGG 0.575908 5:+69171708 MsaT028815.1:CDS
CTGGGAAGTCTTGCCGTCTG+CGG 0.576361 5:+69171509 MsaT028815.1:CDS
GTGAAACTGGTGAAAGAAAA+CGG 0.576751 5:+69171442 MsaT028815.1:CDS
AGCGGTTTCACCGGTTACAA+CGG 0.581530 5:+69171726 MsaT028815.1:CDS
ATCACACCGGTGGTAATCAT+CGG 0.583268 5:-69171793 None:intergenic
CCTCCGCCGGTGTAAAAGGA+AGG 0.589718 5:-69171564 None:intergenic
AACTGGTCTGTGATAAGCAA+CGG 0.591578 5:+69171472 MsaT028815.1:CDS
TGTTCAAAGGGTTCCAACGG+CGG 0.597209 5:+69171768 MsaT028815.1:CDS
TATGTTGATAACATGCGCCT+TGG 0.597244 5:+69172171 MsaT028815.1:CDS
ATGATGATGTTATCCTCCGC+CGG 0.600301 5:-69171577 None:intergenic
TGAAAACGGTGATAAAGTGA+AGG 0.601532 5:+69171387 MsaT028815.1:CDS
GCTGATTACACCACCGCAGA+CGG 0.606009 5:-69171522 None:intergenic
GGTTGTTCAAAGGGTTCCAA+CGG 0.607530 5:+69171765 MsaT028815.1:CDS
GTAACCGGTGAAACCGCTAC+AGG 0.613298 5:-69171721 None:intergenic
GGGTCTCGTGGGTCACGTGA+CGG 0.620845 5:+69171922 MsaT028815.1:CDS
GAAAACGGTGATAAAGTGAA+GGG 0.623051 5:+69171388 MsaT028815.1:CDS
AACGGTGGTGGTGATGAAAA+CGG 0.632028 5:+69171373 MsaT028815.1:CDS
GAGCCGCCGTGCGACGACGG+CGG 0.636965 5:-69171699 None:intergenic
GTTATGGTTGAGAATAATAG+CGG 0.638175 5:+69171901 MsaT028815.1:CDS
TCTTCTTTCAGAAAACCAGG+TGG 0.639884 5:-69172021 None:intergenic
TTATGGTTGAGAATAATAGC+GGG 0.641955 5:+69171902 MsaT028815.1:CDS
GCGGTGCCGATGATTACCAC+CGG 0.644749 5:+69171787 MsaT028815.1:CDS
TGTAAAAGGAAGGTGTTGAA+CGG 0.650810 5:-69171554 None:intergenic
TCCAATTCGAATTCAAACGG+TGG 0.661563 5:+69171358 MsaT028815.1:CDS
GTAACGGAAGATGATGACGC+AGG 0.670273 5:+69171955 MsaT028815.1:CDS
TAACGGAAGATGATGACGCA+GGG 0.671779 5:+69171956 MsaT028815.1:CDS
CAGGAGCAAACCCACCACCA+AGG 0.672680 5:-69172188 None:intergenic
TTATTCTCAACCATAACACA+AGG 0.679685 5:-69171895 None:intergenic
AAGACTTCCCAGAACGACCG+GGG 0.681485 5:-69171498 None:intergenic
TCTTCAGCGCATGATAGCAG+AGG 0.681841 5:+69172137 MsaT028815.1:CDS
TGACGGTGAAGAAACGGTAA+CGG 0.688161 5:+69171939 MsaT028815.1:CDS
AGGGAATAAAGGTGTTAACG+TGG 0.740809 5:+69171975 MsaT028815.1:CDS
TCTCCGCCGTCGTCGCACGG+CGG 0.756035 5:+69171696 MsaT028815.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 69171337 69172230 69171337 ID=MsaG028815
Chr5 mRNA 69171337 69172230 69171337 ID=MsaT028815.1;Parent=MsaG028815
Chr5 exon 69171337 69172230 69171337 ID=MsaT028815.1.exon1;Parent=MsaT028815.1
Chr5 CDS 69171337 69172230 69171337 ID=cds.MsaT028815.1;Parent=MsaT028815.1
Gene Sequence

>MsaT028815.1

ATGATCAGTGCAAATTCGAATTCCAATTCGAATTCAAACGGTGGTGGTGATGAAAACGGTGATAAAGTGAAGGGTTCATGGAGTAAAAACGAAGATGAAACATTGGTGAAACTGGTGAAAGAAAACGGTGCAAGAAACTGGTCTGTGATAAGCAACGGAATCCCCGGTCGTTCTGGGAAGTCTTGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACCTTCCTTTTACACCGGCGGAGGATAACATCATCATTGAAGCACATGCAGTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGTAGAACAGATAACGCGATAAAAAATCACTGGAATTCAACTCTCCGCCGTCGTCGCACGGCGGCTCCTGTAGCGGTTTCACCGGTTACAACGGTTCCACCGGTTGCAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGATGATTACCACCGGTGTGATAACCGGAAAACGTGTGAATGAAAGTTACGACAGTGATTATTATAAGGATTTGTTGAGTCTCGGCACACGTTATAAACGTCCTTGTGTTATGGTTGAGAATAATAGCGGGTCTCGTGGGTCACGTGACGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAAGGTGTTAACGTGGTTAGGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGGTTCTTCAGCGCATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTGGTGGTGGGTTTGCTCCTGATTCAACACTTCGAAAGTGA
Protein sequence

>MsaT028815.1

MISANSNSNSNSNGGGDENGDKVKGSWSKNEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHLPFTPAEDNIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAAPVAVSPVTTVPPVATVVQRVPTAVPMITTGVITGKRVNESYDSDYYKDLLSLGTRYKRPCVMVENNSGSRGSRDGEETVTEDDDAGNKGVNVVRTSLSLFPPGFLKEEEERKEKEKEIEDFEDSNDDLKLLKNEKLRSVLQRMIAEEVRNYVDNMRLGGGFAPDSTLRK*