AlfalfaGEDB | MsaG029162

M. sativa ssp. caerulea / MsaG029162

KEGG: K21752
GO: -
PFAM: PF00808.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029162	XP_013454332.1	81.379	290	31	4	1	267	1	290	2.94e-131	384

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029162	sp\|Q14919\|NC2A_HUMAN	43.125	160	69	3	2	161	5	142	3.58e-33	123

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029162	tr\|A0A072UGZ0\|A0A072UGZ0_MEDTR	81.379	290	31	4	1	267	1	290	1.40e-131	384

TFs/TRs:

Gene ID	Type	Classification
MsaG029162	TF	NF-YC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000023	MsaG029162	0.834620	4.908463e-56	1.625612e-53
MsaG000219	MsaG029162	0.845486	7.397866e-59	3.444453e-56
MsaG000315	MsaG029162	0.856090	7.889741e-62	5.302858e-59
MsaG000566	MsaG029162	0.916990	2.299129e-85	3.488825e-81
MsaG000545	MsaG029162	0.858246	1.834793e-62	1.335302e-59
MsaG000705	MsaG029162	0.808509	5.093813e-50	8.391694e-48
MsaG000761	MsaG029162	0.812569	6.825692e-51	1.241481e-48
MsaG000910	MsaG029162	0.800229	2.656805e-48	3.610727e-46
MsaG001045	MsaG029162	0.830174	6.125226e-55	1.781554e-52
MsaG001285	MsaG029162	0.827558	2.613602e-54	7.059426e-52
MsaG001409	MsaG029162	0.810786	1.660321e-50	2.890207e-48
MsaG001858	MsaG029162	0.891757	6.574142e-74	2.124478e-70
MsaG002167	MsaG029162	0.847196	2.542419e-59	1.253203e-56
MsaG002532	MsaG029162	0.808413	5.339898e-50	8.776517e-48
MsaG002810	MsaG029162	0.897627	2.662922e-76	1.188464e-72
MsaG002838	MsaG029162	0.801274	1.629746e-48	2.267767e-46
MsaG002975	MsaG029162	0.808894	4.218450e-50	7.014474e-48
MsaG003234	MsaG029162	0.813545	4.179700e-51	7.789640e-49
MsaG003267	MsaG029162	0.819646	1.821953e-52	3.969523e-50
MsaG003431	MsaG029162	0.818075	4.128119e-52	8.633049e-50
MsaG003512	MsaG029162	0.830990	3.874923e-55	1.153698e-52
MsaG003590	MsaG029162	0.801864	1.234995e-48	1.741731e-46
MsaG003711	MsaG029162	0.801243	1.653728e-48	2.299498e-46
MsaG004007	MsaG029162	0.802065	1.123567e-48	1.591820e-46
MsaG004091	MsaG029162	0.846870	3.120455e-59	1.521337e-56
MsaG004166	MsaG029162	0.814023	3.283835e-51	6.193737e-49
MsaG004193	MsaG029162	0.803516	5.656462e-49	8.285502e-47
MsaG004357	MsaG029162	0.802411	9.544457e-49	1.362994e-46
MsaG004445	MsaG029162	0.802391	9.637003e-49	1.375564e-46
MsaG004495	MsaG029162	0.854620	2.104484e-61	1.341234e-58
MsaG004620	MsaG029162	0.828107	1.931362e-54	5.297566e-52
MsaG004712	MsaG029162	0.801426	1.517531e-48	2.118961e-46
MsaG004870	MsaG029162	0.832026	2.159427e-55	6.626651e-53
MsaG004962	MsaG029162	0.836460	1.689373e-56	5.912417e-54
MsaG005038	MsaG029162	0.829614	8.374764e-55	2.397151e-52
MsaG005083	MsaG029162	0.804682	3.243225e-49	4.880765e-47
MsaG005054	MsaG029162	0.844533	1.334295e-58	6.020513e-56
MsaG005130	MsaG029162	0.816759	8.140796e-52	1.645724e-49
MsaG005139	MsaG029162	0.847465	2.146449e-59	1.067681e-56
MsaG005204	MsaG029162	0.845254	8.545664e-59	3.948402e-56
MsaG005257	MsaG029162	0.866991	3.823462e-65	3.914767e-62
MsaG005345	MsaG029162	0.815398	1.633785e-51	3.190248e-49
MsaG005545	MsaG029162	0.819338	2.139792e-52	4.625012e-50
MsaG005578	MsaG029162	0.807151	9.873634e-50	1.574469e-47
MsaG005579	MsaG029162	0.805564	2.125391e-49	3.264618e-47
MsaG005831	MsaG029162	0.812627	6.629715e-51	1.207551e-48
MsaG005769	MsaG029162	0.846732	3.402273e-59	1.651236e-56
MsaG005892	MsaG029162	0.824597	1.312377e-53	3.265072e-51
MsaG005906	MsaG029162	0.831102	3.638585e-55	1.086810e-52
MsaG005940	MsaG029162	0.853573	4.205486e-61	2.581890e-58
MsaG005941	MsaG029162	0.825608	7.588746e-54	1.941171e-51
MsaG006129	MsaG029162	0.844050	1.796034e-58	7.976339e-56
MsaG006162	MsaG029162	0.812069	8.767926e-51	1.574996e-48
MsaG006195	MsaG029162	0.816350	1.004369e-51	2.009209e-49
MsaG006231	MsaG029162	0.850189	3.796559e-60	2.070894e-57
MsaG006332	MsaG029162	0.809780	2.729130e-50	4.635972e-48
MsaG006504	MsaG029162	0.831073	3.698070e-55	1.103656e-52
MsaG006563	MsaG029162	0.858023	2.136975e-62	1.542297e-59
MsaG006762	MsaG029162	0.804695	3.223395e-49	4.852309e-47
MsaG007026	MsaG029162	0.808794	4.431431e-50	7.350671e-48
MsaG007064	MsaG029162	0.806012	1.712490e-49	2.658246e-47
MsaG007074	MsaG029162	0.835581	2.817468e-56	9.602821e-54
MsaG007077	MsaG029162	0.813156	5.083089e-51	9.381545e-49
MsaG007212	MsaG029162	0.805309	2.402078e-49	3.667866e-47
MsaG007496	MsaG029162	0.822290	4.516516e-53	1.055584e-50
MsaG007546	MsaG029162	0.821488	6.909645e-53	1.580756e-50
MsaG007762	MsaG029162	0.834022	6.923934e-56	2.252307e-53
MsaG007827	MsaG029162	0.829494	8.954266e-55	2.554183e-52
MsaG008049	MsaG029162	0.800050	2.888130e-48	3.909382e-46
MsaG008062	MsaG029162	0.821670	6.276799e-53	1.442909e-50
MsaG008125	MsaG029162	0.810338	2.071747e-50	3.567360e-48
MsaG008330	MsaG029162	0.800080	2.848094e-48	3.857756e-46
MsaG008874	MsaG029162	0.832459	1.689562e-55	5.249991e-53
MsaG009004	MsaG029162	0.802974	7.315196e-49	1.058176e-46
MsaG009112	MsaG029162	0.801080	1.784574e-48	2.472349e-46
MsaG009447	MsaG029162	0.876045	3.964730e-68	5.973537e-65
MsaG009674	MsaG029162	0.812965	5.596644e-51	1.028013e-48
MsaG009680	MsaG029162	0.827806	2.281250e-54	6.204575e-52
MsaG009882	MsaG029162	0.816063	1.163379e-51	2.310272e-49
MsaG010028	MsaG029162	0.836204	1.961612e-56	6.812250e-54
MsaG010076	MsaG029162	0.846354	4.309102e-59	2.065014e-56
MsaG010302	MsaG029162	0.827851	2.224814e-54	6.058702e-52
MsaG010305	MsaG029162	0.862070	1.300360e-63	1.094320e-60
MsaG010635	MsaG029162	0.815884	1.275165e-51	2.520792e-49
MsaG010604	MsaG029162	0.816754	8.159783e-52	1.649380e-49
MsaG010710	MsaG029162	0.819359	2.117066e-52	4.578201e-50
MsaG010770	MsaG029162	0.806462	1.378362e-49	2.162672e-47
MsaG010791	MsaG029162	0.808114	6.178202e-50	1.008185e-47
MsaG010792	MsaG029162	0.825991	6.162847e-54	1.593397e-51
MsaG010799	MsaG029162	0.823339	2.580674e-53	6.205026e-51
MsaG011095	MsaG029162	0.809241	3.557720e-50	5.965121e-48
MsaG011227	MsaG029162	0.838629	4.723526e-57	1.766626e-54
MsaG011539	MsaG029162	0.817114	6.781159e-52	1.383488e-49
MsaG011454	MsaG029162	0.817196	6.501386e-52	1.329208e-49
MsaG011478	MsaG029162	0.809743	2.779662e-50	4.717528e-48
MsaG011575	MsaG029162	0.840702	1.372573e-57	5.477664e-55
MsaG011678	MsaG029162	0.854958	1.681337e-61	1.084559e-58
MsaG011995	MsaG029162	0.835995	2.215142e-56	7.644317e-54
MsaG012012	MsaG029162	0.812559	6.859432e-51	1.247321e-48
MsaG012013	MsaG029162	0.837257	1.060444e-56	3.801529e-54
MsaG012363	MsaG029162	0.841745	7.321324e-58	3.019823e-55
MsaG012487	MsaG029162	0.856738	5.105041e-62	3.513352e-59
MsaG012470	MsaG029162	0.813282	4.770701e-51	8.832607e-49
MsaG012565	MsaG029162	0.801476	1.482216e-48	2.071987e-46
MsaG012675	MsaG029162	0.813774	3.723712e-51	6.979975e-49
MsaG012891	MsaG029162	0.803290	6.294806e-49	9.172567e-47
MsaG013627	MsaG029162	0.805682	2.008107e-49	3.093073e-47
MsaG014135	MsaG029162	0.854105	2.960404e-61	1.852403e-58
MsaG014207	MsaG029162	0.851252	1.913508e-60	1.082823e-57
MsaG014554	MsaG029162	0.818032	4.220505e-52	8.816601e-50
MsaG014562	MsaG029162	0.810451	1.959982e-50	3.384169e-48
MsaG014651	MsaG029162	0.820860	9.627666e-53	2.166144e-50
MsaG014667	MsaG029162	0.802904	7.559886e-49	1.091814e-46
MsaG014844	MsaG029162	0.811725	1.040997e-50	1.854253e-48
MsaG014961	MsaG029162	0.866358	6.065301e-65	6.050645e-62
MsaG015012	MsaG029162	0.821533	6.750322e-53	1.546088e-50
MsaG015144	MsaG029162	0.877519	1.231320e-68	1.982416e-65
MsaG015284	MsaG029162	0.817371	5.940022e-52	1.219913e-49
MsaG015319	MsaG029162	0.820534	1.143238e-52	2.550217e-50
MsaG015854	MsaG029162	0.800253	2.627767e-48	3.573165e-46
MsaG016056	MsaG029162	0.801638	1.373685e-48	1.927364e-46
MsaG016116	MsaG029162	0.815894	1.268682e-51	2.508624e-49
MsaG016118	MsaG029162	0.811704	1.051659e-50	1.872338e-48
MsaG016159	MsaG029162	0.826005	6.116960e-54	1.582133e-51
MsaG016164	MsaG029162	0.801371	1.557517e-48	2.172059e-46
MsaG016385	MsaG029162	0.817420	5.793084e-52	1.191244e-49
MsaG016416	MsaG029162	0.801245	1.651866e-48	2.297033e-46
MsaG016459	MsaG029162	0.848361	1.218907e-59	6.246981e-57
MsaG016483	MsaG029162	0.866358	6.066247e-65	6.051530e-62
MsaG016531	MsaG029162	0.809545	3.064374e-50	5.176024e-48
MsaG017106	MsaG029162	0.845980	5.441772e-59	2.575606e-56
MsaG017131	MsaG029162	0.852128	1.083100e-60	6.320558e-58
MsaG017148	MsaG029162	0.859222	9.410350e-63	7.103681e-60
MsaG017288	MsaG029162	0.833477	9.462094e-56	3.029141e-53
MsaG017323	MsaG029162	0.828177	1.859068e-54	5.109130e-52
MsaG017568	MsaG029162	0.823497	2.370255e-53	5.723362e-51
MsaG017746	MsaG029162	0.812487	7.111217e-51	1.290783e-48
MsaG017783	MsaG029162	0.811020	1.477809e-50	2.587278e-48
MsaG017807	MsaG029162	0.845584	6.962199e-59	3.252141e-56
MsaG017849	MsaG029162	0.840507	1.542786e-57	6.119380e-55
MsaG017867	MsaG029162	0.846996	2.882830e-59	1.411508e-56
MsaG018148	MsaG029162	0.809263	3.519316e-50	5.903861e-48
MsaG018208	MsaG029162	0.801976	1.171738e-48	1.656706e-46
MsaG018266	MsaG029162	0.806649	1.259099e-49	1.984202e-47
MsaG018440	MsaG029162	0.839298	3.176545e-57	1.213009e-54
MsaG018766	MsaG029162	0.817191	6.516735e-52	1.332197e-49
MsaG018958	MsaG029162	0.806970	1.077658e-49	1.711132e-47
MsaG019435	MsaG029162	0.875335	6.929370e-68	1.011182e-64
MsaG019547	MsaG029162	0.848868	8.835447e-60	4.607251e-57
MsaG019932	MsaG029162	0.852116	1.092101e-60	6.370148e-58
MsaG020385	MsaG029162	0.837500	9.193011e-57	3.320545e-54
MsaG020607	MsaG029162	0.859043	1.063553e-62	7.974734e-60
MsaG020730	MsaG029162	0.810400	2.009227e-50	3.464949e-48
MsaG020738	MsaG029162	0.911540	1.320466e-82	1.378862e-78
MsaG020778	MsaG029162	0.851175	2.010589e-60	1.134759e-57
MsaG020965	MsaG029162	0.818970	2.592472e-52	5.549334e-50
MsaG021165	MsaG029162	0.817296	6.173571e-52	1.265462e-49
MsaG021264	MsaG029162	0.811225	1.334746e-50	2.348606e-48
MsaG021343	MsaG029162	0.890936	1.385425e-73	4.286365e-70
MsaG021422	MsaG029162	0.812608	6.693700e-51	1.218634e-48
MsaG021592	MsaG029162	0.851776	1.362571e-60	7.852898e-58
MsaG021695	MsaG029162	0.821985	5.309582e-53	1.230868e-50
MsaG021996	MsaG029162	0.806307	1.485456e-49	2.322140e-47
MsaG022323	MsaG029162	0.833255	1.074078e-55	3.416217e-53
MsaG022554	MsaG029162	0.830288	5.745573e-55	1.676570e-52
MsaG022600	MsaG029162	0.808685	4.673926e-50	7.732960e-48
MsaG022767	MsaG029162	0.837811	7.657840e-57	2.792247e-54
MsaG022998	MsaG029162	0.803726	5.118006e-49	7.533485e-47
MsaG023214	MsaG029162	0.834257	6.049088e-56	1.981652e-53
MsaG023302	MsaG029162	0.823224	2.744078e-53	6.577120e-51
MsaG023479	MsaG029162	0.818423	3.446010e-52	7.271533e-50
MsaG023582	MsaG029162	0.805407	2.291088e-49	3.506394e-47
MsaG023662	MsaG029162	0.803952	4.595344e-49	6.799640e-47
MsaG023913	MsaG029162	0.865838	8.847541e-65	8.643534e-62
MsaG023873	MsaG029162	0.820875	9.551306e-53	2.149866e-50
MsaG023997	MsaG029162	0.837551	8.921135e-57	3.227198e-54
MsaG025231	MsaG029162	0.866600	5.089131e-65	5.127838e-62
MsaG025864	MsaG029162	0.870507	2.819994e-66	3.337926e-63
MsaG026152	MsaG029162	0.820042	1.480502e-52	3.259852e-50
MsaG026756	MsaG029162	0.801398	1.537686e-48	2.145742e-46
MsaG026818	MsaG029162	0.813104	5.219475e-51	9.620549e-49
MsaG027305	MsaG029162	0.818495	3.320323e-52	7.019363e-50
MsaG027329	MsaG029162	0.813175	5.035466e-51	9.298072e-49
MsaG027500	MsaG029162	0.835651	2.705440e-56	9.240423e-54
MsaG027832	MsaG029162	0.853870	3.456698e-61	2.144916e-58
MsaG027935	MsaG029162	0.827127	3.313124e-54	8.841002e-52
MsaG028035	MsaG029162	0.801434	1.511627e-48	2.111125e-46
MsaG028188	MsaG029162	0.894639	4.580808e-75	1.730063e-71
MsaG028221	MsaG029162	0.844395	1.452575e-58	6.524733e-56
MsaG028483	MsaG029162	0.811308	1.280893e-50	2.258454e-48
MsaG028522	MsaG029162	0.836159	2.013382e-56	6.982798e-54
MsaG028627	MsaG029162	0.817091	6.863744e-52	1.399497e-49
MsaG028675	MsaG029162	0.823516	2.346774e-53	5.669639e-51
MsaG028704	MsaG029162	0.875409	6.538359e-68	9.573611e-65
MsaG028762	MsaG029162	0.811852	9.770212e-51	1.745789e-48
MsaG028875	MsaG029162	0.816476	9.414467e-52	1.889352e-49
MsaG028928	MsaG029162	0.841335	9.380280e-58	3.818932e-55
MsaG029064	MsaG029162	0.828506	1.549361e-54	4.297714e-52
MsaG029074	MsaG029162	0.856662	5.373437e-62	3.687903e-59
MsaG029128	MsaG029162	0.839310	3.152950e-57	1.204440e-54
MsaG029106	MsaG029162	0.835725	2.590631e-56	8.867941e-54
MsaG029162	MsaG029172	0.849112	7.564213e-60	3.977583e-57
MsaG029162	MsaG029225	0.819680	1.789675e-52	3.902731e-50
MsaG029162	MsaG029539	0.812350	7.617188e-51	1.377900e-48
MsaG029162	MsaG029635	0.842754	3.968925e-58	1.690893e-55
MsaG029162	MsaG029946	0.819089	2.437330e-52	5.233523e-50
MsaG029162	MsaG029986	0.818774	2.872128e-52	6.116142e-50
MsaG029162	MsaG030353	0.817814	4.726238e-52	9.817624e-50
MsaG029162	MsaG030455	0.822853	3.344864e-53	7.937375e-51
MsaG029162	MsaG030494	0.824649	1.275491e-53	3.177796e-51
MsaG029162	MsaG030698	0.838980	3.835727e-57	1.450405e-54
MsaG029162	MsaG030665	0.832651	1.515071e-55	4.734047e-53
MsaG029162	MsaG030888	0.810024	2.419969e-50	4.134973e-48
MsaG029162	MsaG032424	0.836559	1.594348e-56	5.596258e-54
MsaG029162	MsaG032560	0.813498	4.280222e-51	7.967494e-49
MsaG029162	MsaG032927	0.805290	2.423742e-49	3.699337e-47
MsaG029162	MsaG033154	0.849546	5.734115e-60	3.060364e-57
MsaG029162	MsaG033570	0.836673	1.492299e-56	5.255959e-54
MsaG029162	MsaG033588	0.812484	7.121384e-51	1.292534e-48
MsaG029162	MsaG033794	0.841657	7.722218e-58	3.176358e-55
MsaG029162	MsaG033897	0.813405	4.485294e-51	8.329956e-49
MsaG029162	MsaG034018	0.811722	1.042461e-50	1.856746e-48
MsaG029162	MsaG034763	0.839683	2.525555e-57	9.761670e-55
MsaG029162	MsaG034866	0.845192	8.879248e-59	4.094212e-56
MsaG029162	MsaG035166	0.844726	1.184193e-58	5.377520e-56
MsaG029162	MsaG035216	0.866959	3.914007e-65	4.002406e-62
MsaG029162	MsaG035232	0.801418	1.523003e-48	2.126248e-46
MsaG029162	MsaG036482	0.825678	7.304626e-54	1.872216e-51
MsaG029162	MsaG036485	0.826812	3.936458e-54	1.041225e-51
MsaG029162	MsaG037421	0.864249	2.775076e-64	2.544533e-61
MsaG029162	MsaG038108	0.809903	2.569280e-50	4.377309e-48
MsaG029162	MsaG038325	0.801779	1.285756e-48	1.809756e-46
MsaG029162	MsaG038555	0.816743	8.207960e-52	1.658619e-49
MsaG029162	MsaG038520	0.865698	9.792276e-65	9.512357e-62
MsaG029162	MsaG038522	0.839804	2.349153e-57	9.114505e-55
MsaG029162	MsaG038525	0.834062	6.766083e-56	2.203627e-53
MsaG029162	MsaG038752	0.806921	1.103999e-49	1.750883e-47
MsaG029162	MsaG038996	0.804542	3.468346e-49	5.202676e-47
MsaG029162	MsaG039466	0.857947	2.250525e-62	1.619663e-59
MsaG029162	MsaG039683	0.824906	1.110074e-53	2.785323e-51
MsaG029162	MsaG039831	0.826671	4.253296e-54	1.120633e-51
MsaG029162	MsaG040154	0.815028	1.973020e-51	3.816653e-49
MsaG029162	MsaG040229	0.819223	2.271880e-52	4.895534e-50
MsaG029162	MsaG040390	0.835099	3.724051e-56	1.251139e-53
MsaG029162	MsaG040450	0.817184	6.540433e-52	1.336782e-49
MsaG029162	MsaG040452	0.822861	3.331207e-53	7.906648e-51
MsaG029162	MsaG040511	0.805514	2.176615e-49	3.339432e-47
MsaG029162	MsaG040640	0.835741	2.567682e-56	8.793474e-54
MsaG029162	MsaG041735	0.836922	1.290144e-56	4.578313e-54
MsaG029162	MsaG041746	0.809772	2.740321e-50	4.654036e-48
MsaG029162	MsaG041771	0.890418	2.208469e-73	6.653652e-70
MsaG029162	MsaG041778	0.821843	5.725236e-53	1.322174e-50
MsaG029162	MsaG041812	0.826949	3.651006e-54	9.694633e-52
MsaG029162	MsaG041814	0.828947	1.213821e-54	3.408553e-52
MsaG029162	MsaG041841	0.804203	4.077300e-49	6.068396e-47
MsaG029162	MsaG042149	0.807616	7.875371e-50	1.269816e-47
MsaG029162	MsaG042748	0.803582	5.480316e-49	8.039802e-47
MsaG029162	MsaG042856	0.811077	1.436795e-50	2.519021e-48
MsaG029162	MsaG042926	0.816954	7.362629e-52	1.495922e-49
MsaG029162	MsaG043238	0.805333	2.374432e-49	3.627707e-47
MsaG029162	MsaG043716	0.842723	4.044671e-58	1.721431e-55
MsaG029162	MsaG043846	0.821974	5.342335e-53	1.238060e-50
MsaG029162	MsaG043847	0.856459	6.158239e-62	4.195612e-59
MsaG029162	MsaG044570	0.865912	8.384666e-65	8.215592e-62
MsaG029162	MsaG044542	0.803654	5.295400e-49	7.781519e-47
MsaG029162	MsaG044602	0.813971	3.370839e-51	6.349786e-49
MsaG029162	MsaG044630	0.877325	1.437502e-68	2.293922e-65
MsaG029162	MsaG044732	0.833948	7.223006e-56	2.344479e-53
MsaG029162	MsaG044744	0.808304	5.630923e-50	9.230785e-48
MsaG029162	MsaG045234	0.867253	3.156799e-65	3.265985e-62
MsaG029162	MsaG045242	0.852945	6.350708e-61	3.813743e-58
MsaG029162	MsaG045429	0.806194	1.568641e-49	2.445608e-47
MsaG029162	MsaG045454	0.839737	2.445096e-57	9.466704e-55
MsaG029162	MsaG045521	0.803245	6.430823e-49	9.361110e-47
MsaG029162	MsaG045553	0.824222	1.605643e-53	3.954095e-51
MsaG029162	MsaG045556	0.843268	2.901049e-58	1.256464e-55
MsaG029162	MsaG045582	0.825143	9.765709e-54	2.466226e-51
MsaG029162	MsaG045600	0.815423	1.613230e-51	3.152101e-49
MsaG029162	MsaG045646	0.809295	3.465605e-50	5.818054e-48
MsaG029162	MsaG045736	0.821211	8.000666e-53	1.816977e-50
MsaG029162	MsaG045748	0.812892	5.804908e-51	1.064315e-48
MsaG029162	MsaG045790	0.811452	1.192499e-50	2.110004e-48
MsaG029162	MsaG045909	0.812662	6.516193e-51	1.187887e-48
MsaG029162	MsaG046150	0.898796	8.537735e-77	4.070071e-73
MsaG029162	MsaG046163	0.822837	3.374646e-53	8.004399e-51
MsaG029162	MsaG046275	0.842883	3.669776e-58	1.569882e-55
MsaG029162	MsaG046278	0.836890	1.314666e-56	4.660836e-54
MsaG029162	MsaG046495	0.890375	2.297237e-73	6.905124e-70
MsaG029162	MsaG046569	0.800134	2.777354e-48	3.766454e-46
MsaG029162	MsaG046697	0.835104	3.713607e-56	1.247802e-53
MsaG029162	MsaG046718	0.850144	3.907141e-60	2.127873e-57
MsaG029162	MsaG046740	0.835455	3.031153e-56	1.029239e-53
MsaG029162	MsaG046830	0.828939	1.218694e-54	3.421496e-52
MsaG029162	MsaG046957	0.820073	1.456768e-52	3.210220e-50
MsaG029162	MsaG046974	0.824378	1.476471e-53	3.651673e-51
MsaG029162	MsaG001594	0.839002	3.788142e-57	1.433381e-54
MsaG029162	MsaG001905	0.849866	4.671228e-60	2.519961e-57
MsaG029162	MsaG001871	0.847931	1.600336e-59	8.085795e-57
MsaG029162	MsaG001896	0.803293	6.287652e-49	9.162657e-47
MsaG029162	MsaG003580	0.800421	2.429399e-48	3.316129e-46
MsaG029162	MsaG000780	0.830707	4.544339e-55	1.341943e-52
MsaG029162	MsaG003314	0.822852	3.348125e-53	7.944805e-51
MsaG029162	MsaG002387	0.816624	8.724459e-52	1.757548e-49
MsaG029162	MsaG006539	0.812016	9.000981e-51	1.614841e-48
MsaG029162	MsaG007510	0.807762	7.335185e-50	1.186904e-47
MsaG029162	MsaG009514	0.803129	6.795755e-49	9.865804e-47
MsaG029162	MsaG008213	0.858315	1.750605e-62	1.277288e-59
MsaG029162	MsaG006540	0.826419	4.879910e-54	1.276780e-51
MsaG029162	MsaG008699	0.816929	7.460693e-52	1.514861e-49
MsaG029162	MsaG012600	0.837847	7.495391e-57	2.736031e-54
MsaG029162	MsaG011701	0.830656	4.675614e-55	1.378703e-52
MsaG029162	MsaG012745	0.857786	2.509996e-62	1.795727e-59
MsaG029162	MsaG017123	0.816758	8.146536e-52	1.646823e-49
MsaG029162	MsaG014700	0.833022	1.226860e-55	3.875261e-53
MsaG029162	MsaG013040	0.852956	6.305944e-61	3.788316e-58
MsaG029162	MsaG011544	0.810782	1.663561e-50	2.895554e-48
MsaG029162	MsaG012608	0.803959	4.580530e-49	6.778853e-47
MsaG029162	MsaG013382	0.812602	6.713921e-51	1.222128e-48
MsaG029162	MsaG019320	0.862365	1.056573e-63	8.994297e-61
MsaG029162	MsaG020160	0.800533	2.305026e-48	3.154351e-46
MsaG029162	MsaG019765	0.816875	7.668798e-52	1.554934e-49
MsaG029162	MsaG023219	0.844662	1.232064e-58	5.583310e-56
MsaG029162	MsaG020164	0.872329	7.086670e-67	9.070195e-64
MsaG029162	MsaG020545	0.822417	4.220589e-53	9.898186e-51
MsaG029162	MsaG018389	0.838980	3.837890e-57	1.451200e-54
MsaG029162	MsaG019500	0.823199	2.781195e-53	6.661659e-51
MsaG029162	MsaG027471	0.829437	9.241121e-55	2.631685e-52
MsaG029162	MsaG026779	0.803604	5.424900e-49	7.962281e-47
MsaG029162	MsaG027141	0.803860	4.801786e-49	7.089838e-47
MsaG029162	MsaG027111	0.840794	1.299097e-57	5.199276e-55
MsaG029162	MsaG028085	0.804586	3.396244e-49	5.099565e-47
MsaG029162	MsaG028048	0.834019	6.936634e-56	2.256209e-53
MsaG029162	MsaG027785	0.858511	1.531879e-62	1.125995e-59
MsaG029162	MsaG028298	0.830342	5.575369e-55	1.629414e-52
MsaG029162	MsaG032293	0.868370	1.388164e-65	1.503510e-62
MsaG029162	MsaG033330	0.810656	1.770743e-50	3.072637e-48
MsaG029162	MsaG031376	0.823028	3.046382e-53	7.263357e-51
MsaG029162	MsaG032302	0.868463	1.295815e-65	1.408919e-62
MsaG029162	MsaG032245	0.810892	1.575263e-50	2.749222e-48
MsaG029162	MsaG029995	0.906539	3.163753e-80	2.394743e-76
MsaG029162	MsaG032993	0.811700	1.053634e-50	1.875695e-48
MsaG029162	MsaG033663	0.824566	1.334425e-53	3.317183e-51
MsaG029162	MsaG033505	0.873487	2.914991e-67	3.922542e-64
MsaG029162	MsaG034182	0.845325	8.175547e-59	3.786328e-56
MsaG029162	MsaG032721	0.846152	4.888397e-59	2.326985e-56
MsaG029162	MsaG032969	0.817397	5.860301e-52	1.204345e-49
MsaG029162	MsaG030573	0.821391	7.276301e-53	1.660302e-50
MsaG029162	MsaG032701	0.807930	6.759791e-50	1.098242e-47
MsaG029162	MsaG032833	0.813723	3.820223e-51	7.151597e-49
MsaG029162	MsaG033446	0.831478	2.943569e-55	8.888875e-53
MsaG029162	MsaG035260	0.809021	3.963302e-50	6.610346e-48
MsaG029162	MsaG038165	0.806338	1.463608e-49	2.289640e-47
MsaG029162	MsaG040323	0.814391	2.725964e-51	5.189415e-49
MsaG029162	MsaG038133	0.802001	1.157839e-48	1.637967e-46
MsaG029162	MsaG036619	0.802730	8.208791e-49	1.180802e-46
MsaG029162	MsaG037652	0.851400	1.738168e-60	9.886409e-58
MsaG029162	MsaG035337	0.827178	3.221665e-54	8.608977e-52
MsaG029162	MsaG038220	0.812321	7.728789e-51	1.397052e-48
MsaG029162	MsaG036361	0.846390	4.213267e-59	2.021491e-56
MsaG029162	MsaG036344	0.834137	6.482301e-56	2.115904e-53
MsaG029162	MsaG043789	0.817441	5.730405e-52	1.178979e-49
MsaG029162	MsaG043455	0.811313	1.277634e-50	2.252958e-48
MsaG029162	MsaG043768	0.829763	7.707765e-55	2.215574e-52
MsaG029162	MsaG043110	0.834346	5.746668e-56	1.887744e-53
MsaG029162	MsaG042910	0.831538	2.845830e-55	8.609028e-53
MsaG029162	MsaG043849	0.802578	8.818774e-49	1.264195e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029162	MtrunA17_Chr5g0441241	80.220	273	31	4	18	267	1	273	2.38e-122	350
MsaG029162	MtrunA17_Chr3g0081161	45.270	296	118	7	1	268	1	280	1.78e-69	216
MsaG029162	MtrunA17_Chr8g0354151	48.299	294	126	7	1	268	1	294	9.98e-69	215

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029162	AT3G12480.1	69.466	131	34	1	1	125	1	131	3.63e-59	190
MsaG029162	AT5G19490.1	76.364	110	24	1	1	110	1	108	6.89e-56	181

Find 56 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTTAACTTCCTCGATTTC+TGG	0.151578	5:-73811223	None:intergenic
AACTAGCCAACTTAAGTAAA+AGG	0.241392	5:+73811513	MsaT029162.1:CDS
GTGAGCAAAGTTCCTGATTT+AGG	0.300821	5:+73810351	MsaT029162.1:CDS
ATGCAAGCTGATGAAGATAT+AGG	0.348420	5:+73809089	MsaT029162.1:CDS
GCTTAACTTCCTCGATTTCT+GGG	0.371274	5:-73811222	None:intergenic
ACTTAAGTTGGCTAGTTGTA+AGG	0.372538	5:-73811507	None:intergenic
AGGGGTAGAGGCAGGGGACG+TGG	0.387631	5:+73811088	MsaT029162.1:CDS
TAAAAGGATTGATGAAGATA+TGG	0.395167	5:+73811529	MsaT029162.1:CDS
GTGGAAGGCGGTAGGGGTAG+AGG	0.397290	5:+73811076	MsaT029162.1:CDS
GGCGGTAGGGGTAGAGGCAG+GGG	0.401288	5:+73811082	MsaT029162.1:CDS
TGCAAGCTGATGAAGATATA+GGG	0.408049	5:+73809090	MsaT029162.1:CDS
AAGGCGGTAGGGGTAGAGGC+AGG	0.420263	5:+73811080	MsaT029162.1:CDS
AGGGGACGTGGCCGCGGCCA+AGG	0.424123	5:+73811100	MsaT029162.1:CDS
AGAGGCAGGGGACGTGGCCG+CGG	0.424913	5:+73811094	MsaT029162.1:CDS
ATTTCGATTTAAATCTGAAT+CGG	0.427921	5:+73811322	MsaT029162.1:CDS
GCAGCAGAACCGCCTAAATC+AGG	0.433277	5:-73810363	None:intergenic
GAACAATGCTTAACTTCCTC+AGG	0.444484	5:-73811265	None:intergenic
ACTTCCTCAGGTTCTTTGAC+TGG	0.454445	5:-73811253	None:intergenic
TTAGGCGGTTCTGCTGCAAC+TGG	0.479475	5:+73810369	MsaT029162.1:CDS
CTTAAGTTGGCTAGTTGTAA+GGG	0.481167	5:-73811506	None:intergenic
ATTTAAATCTGAATCGGATC+CGG	0.484334	5:+73811328	MsaT029162.1:CDS
ATTTCATCCATGTCGTCATC+CGG	0.486479	5:-73811347	None:intergenic
TTACAAATGAAAAGCATTCA+CGG	0.491312	5:-73809345	None:intergenic
GAAGATGAACCGGATGGGAT+AGG	0.503037	5:-73811383	None:intergenic
AGGCGGTAGGGGTAGAGGCA+GGG	0.507667	5:+73811081	MsaT029162.1:CDS
ATCGGATCCGGATGACGACA+TGG	0.543974	5:+73811340	MsaT029162.1:CDS
GACTACTTACAAACTAGAAG+AGG	0.544073	5:-73809131	None:intergenic
TGTGAAGCATTGAAGCAAAA+CGG	0.548283	5:+73811175	MsaT029162.1:CDS
ACCTCCTCTTAGTGACAGCT+TGG	0.548550	5:-73810398	None:intergenic
CATACCAGTGGAAGGCGGTA+GGG	0.550508	5:+73811069	MsaT029162.1:CDS
AATTTCAGAAGAGAAGATTG+AGG	0.553548	5:+73811436	MsaT029162.1:CDS
CATACGAGATAACACTTAGG+AGG	0.553719	5:+73809312	MsaT029162.1:CDS
GAACCGGATGGGATAGGAGT+TGG	0.555156	5:-73811377	None:intergenic
GAGAAGATTGAGGAATACCC+TGG	0.559641	5:+73811446	MsaT029162.1:CDS
CTACCCCTACCGCCTTCCAC+TGG	0.563419	5:-73811073	None:intergenic
ATATCAGAAAAGGACCATCC+AGG	0.563775	5:-73811464	None:intergenic
GCATACCAGTGGAAGGCGGT+AGG	0.565793	5:+73811068	MsaT029162.1:CDS
ATACCAGTGGAAGGCGGTAG+GGG	0.568538	5:+73811070	MsaT029162.1:CDS
ACACCAACTCCTATCCCATC+CGG	0.568917	5:+73811374	MsaT029162.1:CDS
ACGACCAAGCTGTCACTAAG+AGG	0.580960	5:+73810394	MsaT029162.1:CDS
TATCAGAAAAGGACCATCCA+GGG	0.585690	5:-73811463	None:intergenic
ATACGAGATAACACTTAGGA+GGG	0.600468	5:+73809313	MsaT029162.1:CDS
AGATATAGGGAAGATTGCAT+TGG	0.616410	5:+73809103	MsaT029162.1:CDS
TAATGTAAGCCCAGAAATCG+AGG	0.616586	5:+73811213	MsaT029162.1:CDS
AGCAAAGTTCCTGATTTAGG+CGG	0.623500	5:+73810354	MsaT029162.1:CDS
AGAACATGCATACCAGTGGA+AGG	0.636991	5:+73811061	MsaT029162.1:CDS
GGATGGGATAGGAGTTGGTG+TGG	0.637023	5:-73811372	None:intergenic
GAACATACGAGATAACACTT+AGG	0.637954	5:+73809309	MsaT029162.1:CDS
AGATTGAGGAATACCCTGGA+TGG	0.653139	5:+73811450	MsaT029162.1:CDS
AGCGAGAACATGCATACCAG+TGG	0.655844	5:+73811057	MsaT029162.1:intron
TTCACCAGTCAAAGAACCTG+AGG	0.656260	5:+73811249	MsaT029162.1:CDS
CTTACAAACTAGAAGAGGCA+CGG	0.671946	5:-73809126	None:intergenic
TACGAGATAACACTTAGGAG+GGG	0.675136	5:+73809314	MsaT029162.1:CDS
ACCAAGCTGTCACTAAGAGG+AGG	0.677608	5:+73810397	MsaT029162.1:CDS
TGACGATGATGACAGCGATG+AGG	0.685240	5:+73810515	MsaT029162.1:CDS
ACATGCATACCAGTGGAAGG+CGG	0.727596	5:+73811064	MsaT029162.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	73807704	73811574	73807704	ID=MsaG029162
Chr5	mRNA	73807704	73811574	73807704	ID=MsaT029162.1;Parent=MsaG029162
Chr5	exon	73807704	73807736	73807704	ID=MsaT029162.1.exon1;Parent=MsaT029162.1
Chr5	CDS	73807704	73807736	73807704	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73809071	73809143	73809071	ID=MsaT029162.1.exon2;Parent=MsaT029162.1
Chr5	CDS	73809071	73809143	73809071	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73809270	73809363	73809270	ID=MsaT029162.1.exon3;Parent=MsaT029162.1
Chr5	CDS	73809270	73809363	73809270	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73810302	73810418	73810302	ID=MsaT029162.1.exon4;Parent=MsaT029162.1
Chr5	CDS	73810302	73810418	73810302	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73810500	73810549	73810500	ID=MsaT029162.1.exon5;Parent=MsaT029162.1
Chr5	CDS	73810500	73810549	73810500	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73811059	73811273	73811059	ID=MsaT029162.1.exon6;Parent=MsaT029162.1
Chr5	CDS	73811059	73811273	73811059	ID=cds.MsaT029162.1;Parent=MsaT029162.1
Chr5	exon	73811317	73811574	73811317	ID=MsaT029162.1.exon7;Parent=MsaT029162.1
Chr5	CDS	73811317	73811574	73811317	ID=cds.MsaT029162.1;Parent=MsaT029162.1

Gene Sequence

>MsaT029162.1

ATGAGGAAGAAACTAGATACTCGTTTCCCTGCTGCTAGGATTAAGAAAATTATGCAAGCTGATGAAGATATAGGGAAGATTGCATTGGCCGTGCCTCTTCTAGTTTCAAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATAGAACATACGAGATAACACTTAGGAGGGGAGCAAAGACCGTGAATGCTTTTCATTTAAAACAGTGCATACAAACTTGTAATGTCTTTGATTTTCTGAAAGATACTGTGAGCAAAGTTCCTGATTTAGGCGGTTCTGCTGCAACTGGTGACGACCAAGCTGTCACTAAGAGGAGGAAAGTTTTTGAAGATGACGATGATGACAGCGATGAGGAGACCAAGAGAACGAGAACATGCATACCAGTGGAAGGCGGTAGGGGTAGAGGCAGGGGACGTGGCCGCGGCCAAGGAAGTAAAACTGTAGATCAAGAGATCAATTCACATGTCAAGTTTGAAGAAGATTGTGAAGCATTGAAGCAAAACGGCAACCACACTCAAAATAATGTAAGCCCAGAAATCGAGGAAGTTAAGCTGAGTTCACCAGTCAAAGAACCTGAGGAATTCAAATTTCGATTTAAATCTGAATCGGATCCGGATGACGACATGGATGAAATATCCACACCAACTCCTATCCCATCCGGTTCATCTTCAAAATCAGTTTCAGAAGAGAAGATAAAATCAATTTCAGAAGAGAAGATTGAGGAATACCCTGGATGGTCCTTTTCTGATATGGAAAAAATGGCTATTGATCCCTTACAACTAGCCAACTTAAGTAAAAGGATTGATGAAGATATGGAAGATTATGATGAAGAAGTGTAG

Protein sequence

>MsaT029162.1

MRKKLDTRFPAARIKKIMQADEDIGKIALAVPLLVSKALELFLQDLCDRTYEITLRRGAKTVNAFHLKQCIQTCNVFDFLKDTVSKVPDLGGSAATGDDQAVTKRRKVFEDDDDDSDEETKRTRTCIPVEGGRGRGRGRGRGQGSKTVDQEINSHVKFEEDCEALKQNGNHTQNNVSPEIEEVKLSSPVKEPEEFKFRFKSESDPDDDMDEISTPTPIPSGSSSKSVSEEKIKSISEEKIEEYPGWSFSDMEKMAIDPLQLANLSKRIDEDMEDYDEEV*