AlfalfaGEDB | MsaG029184

M. sativa ssp. caerulea / MsaG029184

KEGG: -
GO: -
PFAM: PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029184	XP_024640189.1	90.272	257	25	0	136	392	424	680	1.43e-161	484
MsaG029184	XP_024640189.1	97.351	151	4	0	1	151	1	151	7.56e-97	317

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029184	sp\|Q9FMP3\|DPYS_ARATH	63.636	77	20	1	420	488	223	299	1.95e-19	94.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029184	tr\|A0A396HW08\|A0A396HW08_MEDTR	90.272	257	25	0	136	392	424	680	6.83e-162	484
MsaG029184	tr\|A0A396HW08\|A0A396HW08_MEDTR	97.351	151	4	0	1	151	1	151	3.61e-97	317

TFs/TRs:

Gene ID	Type	Classification
MsaG029184	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG001178	MsaG029184	0.807351	8.959821e-50	1.435570e-47
MsaG001179	MsaG029184	0.805146	2.597469e-49	3.951358e-47
MsaG001191	MsaG029184	0.813768	3.734246e-51	6.998669e-49
MsaG001258	MsaG029184	0.814235	2.949638e-51	5.593328e-49
MsaG001414	MsaG029184	0.834905	4.165842e-56	1.391447e-53
MsaG002009	MsaG029184	0.841885	6.729020e-58	2.788138e-55
MsaG002016	MsaG029184	0.815516	1.538282e-51	3.012725e-49
MsaG004040	MsaG029184	0.826989	3.572234e-54	9.495642e-52
MsaG004319	MsaG029184	0.861277	2.266194e-63	1.849739e-60
MsaG004373	MsaG029184	0.806457	1.381921e-49	2.167982e-47
MsaG004401	MsaG029184	0.803212	6.532631e-49	9.502041e-47
MsaG004555	MsaG029184	0.831685	2.619897e-55	7.960082e-53
MsaG005149	MsaG029184	0.805995	1.726506e-49	2.678915e-47
MsaG005202	MsaG029184	0.801257	1.642878e-48	2.285157e-46
MsaG005205	MsaG029184	0.872563	5.928011e-67	7.663495e-64
MsaG005435	MsaG029184	0.825283	9.051493e-54	2.294653e-51
MsaG005438	MsaG029184	0.832524	1.628176e-55	5.068787e-53
MsaG005680	MsaG029184	0.822012	5.235176e-53	1.214462e-50
MsaG006084	MsaG029184	0.817028	7.089099e-52	1.443117e-49
MsaG006121	MsaG029184	0.810396	2.013703e-50	3.472266e-48
MsaG006604	MsaG029184	0.808573	4.936498e-50	8.145141e-48
MsaG007423	MsaG029184	0.821068	8.626810e-53	1.951788e-50
MsaG007428	MsaG029184	0.831337	3.188735e-55	9.589237e-53
MsaG007716	MsaG029184	0.825640	7.459724e-54	1.909826e-51
MsaG008047	MsaG029184	0.802198	1.055516e-48	1.499918e-46
MsaG008197	MsaG029184	0.822178	4.792240e-53	1.116674e-50
MsaG008208	MsaG029184	0.851597	1.530280e-60	8.763362e-58
MsaG008229	MsaG029184	0.845915	5.664405e-59	2.675174e-56
MsaG008426	MsaG029184	0.852279	9.821129e-61	5.761160e-58
MsaG008550	MsaG029184	0.828316	1.720795e-54	4.747790e-52
MsaG008961	MsaG029184	0.846453	4.051138e-59	1.947704e-56
MsaG008967	MsaG029184	0.815001	2.000308e-51	3.866883e-49
MsaG009100	MsaG029184	0.855840	9.331913e-62	6.214430e-59
MsaG009102	MsaG029184	0.823942	1.867108e-53	4.563139e-51
MsaG009212	MsaG029184	0.845561	7.059974e-59	3.295394e-56
MsaG010031	MsaG029184	0.816276	1.043243e-51	2.083053e-49
MsaG011287	MsaG029184	0.818175	3.920322e-52	8.219697e-50
MsaG011490	MsaG029184	0.801873	1.230066e-48	1.735132e-46
MsaG011599	MsaG029184	0.837102	1.160893e-56	4.142274e-54
MsaG012939	MsaG029184	0.831831	2.411859e-55	7.359382e-53
MsaG012941	MsaG029184	0.824129	1.688630e-53	4.148020e-51
MsaG012942	MsaG029184	0.819208	2.290652e-52	4.933995e-50
MsaG012943	MsaG029184	0.802805	7.924221e-49	1.141818e-46
MsaG013646	MsaG029184	0.839502	2.813956e-57	1.081436e-54
MsaG014099	MsaG029184	0.838034	6.713084e-57	2.464672e-54
MsaG014541	MsaG029184	0.848569	1.068068e-59	5.513105e-57
MsaG015152	MsaG029184	0.827399	2.853413e-54	7.672542e-52
MsaG015178	MsaG029184	0.832116	2.052271e-55	6.314275e-53
MsaG015268	MsaG029184	0.802131	1.089159e-48	1.545368e-46
MsaG017329	MsaG029184	0.821112	8.431333e-53	1.909725e-50
MsaG018218	MsaG029184	0.822852	3.347797e-53	7.944050e-51
MsaG018307	MsaG029184	0.815020	1.980835e-51	3.831015e-49
MsaG018341	MsaG029184	0.829131	1.095863e-54	3.093426e-52
MsaG018343	MsaG029184	0.832849	1.353451e-55	4.253468e-53
MsaG018773	MsaG029184	0.808943	4.119309e-50	6.857607e-48
MsaG018791	MsaG029184	0.820455	1.191827e-52	2.653109e-50
MsaG019140	MsaG029184	0.846156	4.875296e-59	2.321117e-56
MsaG019137	MsaG029184	0.824701	1.240120e-53	3.094130e-51
MsaG019451	MsaG029184	0.804719	3.186599e-49	4.799656e-47
MsaG019663	MsaG029184	0.819069	2.462009e-52	5.283742e-50
MsaG020843	MsaG029184	0.811053	1.453810e-50	2.547364e-48
MsaG020874	MsaG029184	0.801995	1.161191e-48	1.642475e-46
MsaG020875	MsaG029184	0.801526	1.447833e-48	2.026224e-46
MsaG021076	MsaG029184	0.801357	1.567779e-48	2.185664e-46
MsaG021278	MsaG029184	0.861740	1.639090e-63	1.361824e-60
MsaG021279	MsaG029184	0.862809	7.724242e-64	6.691356e-61
MsaG021280	MsaG029184	0.804262	3.965239e-49	5.909612e-47
MsaG021281	MsaG029184	0.859385	8.408135e-63	6.386660e-60
MsaG021575	MsaG029184	0.805745	1.947377e-49	3.004016e-47
MsaG021590	MsaG029184	0.835646	2.712481e-56	9.263223e-54
MsaG022010	MsaG029184	0.805604	2.084434e-49	3.204800e-47
MsaG022011	MsaG029184	0.818868	2.734006e-52	5.836497e-50
MsaG022058	MsaG029184	0.832231	1.923586e-55	5.937429e-53
MsaG022059	MsaG029184	0.806841	1.147113e-49	1.815875e-47
MsaG022628	MsaG029184	0.814675	2.359774e-51	4.524344e-49
MsaG022683	MsaG029184	0.808321	5.585425e-50	9.159731e-48
MsaG023089	MsaG029184	0.817641	5.167278e-52	1.068556e-49
MsaG023339	MsaG029184	0.807427	8.632564e-50	1.385666e-47
MsaG023408	MsaG029184	0.802117	1.096571e-48	1.555357e-46
MsaG023515	MsaG029184	0.801461	1.492631e-48	2.085848e-46
MsaG023516	MsaG029184	0.802590	8.770319e-49	1.257583e-46
MsaG023917	MsaG029184	0.847989	1.542108e-59	7.807080e-57
MsaG023835	MsaG029184	0.862894	7.275858e-64	6.323526e-61
MsaG023837	MsaG029184	0.816677	8.493323e-52	1.713285e-49
MsaG027211	MsaG029184	0.800482	2.361388e-48	3.227667e-46
MsaG028374	MsaG029184	0.816554	9.043324e-52	1.818544e-49
MsaG028351	MsaG029184	0.801051	1.809589e-48	2.505323e-46
MsaG028715	MsaG029184	0.856062	8.043782e-62	5.400665e-59
MsaG028811	MsaG029184	0.834697	4.696196e-56	1.558903e-53
MsaG029086	MsaG029184	0.834994	3.956086e-56	1.324937e-53
MsaG029184	MsaG029281	0.801788	1.280030e-48	1.802074e-46
MsaG029184	MsaG029385	0.831172	3.498235e-55	1.046982e-52
MsaG029184	MsaG029319	0.808612	4.844716e-50	8.000951e-48
MsaG029184	MsaG029324	0.860718	3.344230e-63	2.672768e-60
MsaG029184	MsaG029340	0.864802	1.867930e-64	1.750861e-61
MsaG029184	MsaG031277	0.830850	4.192042e-55	1.243109e-52
MsaG029184	MsaG033437	0.818054	4.173164e-52	8.722479e-50
MsaG029184	MsaG033812	0.823713	2.111023e-53	5.127629e-51
MsaG029184	MsaG033814	0.820927	9.296786e-53	2.095511e-50
MsaG029184	MsaG034658	0.806716	1.218873e-49	1.923856e-47
MsaG029184	MsaG035373	0.820155	1.395130e-52	3.081146e-50
MsaG029184	MsaG035375	0.827563	2.606913e-54	7.042264e-52
MsaG029184	MsaG035376	0.814081	3.187986e-51	6.021898e-49
MsaG029184	MsaG035378	0.815400	1.632509e-51	3.187872e-49
MsaG029184	MsaG036217	0.800989	1.862915e-48	2.575587e-46
MsaG029184	MsaG037863	0.841306	9.543194e-58	3.881904e-55
MsaG029184	MsaG037865	0.837310	1.027686e-56	3.690169e-54
MsaG029184	MsaG037866	0.831081	3.682229e-55	1.099185e-52
MsaG029184	MsaG037867	0.839520	2.782759e-57	1.070052e-54
MsaG029184	MsaG038395	0.862170	1.212349e-63	1.024208e-60
MsaG029184	MsaG038533	0.862821	7.656511e-64	6.635810e-61
MsaG029184	MsaG039622	0.800081	2.846034e-48	3.855076e-46
MsaG029184	MsaG039962	0.800328	2.536502e-48	3.455020e-46
MsaG029184	MsaG040071	0.840266	1.782798e-57	7.018054e-55
MsaG029184	MsaG040072	0.859025	1.077098e-62	8.070387e-60
MsaG029184	MsaG040982	0.802935	7.448537e-49	1.076519e-46
MsaG029184	MsaG041049	0.823334	2.587363e-53	6.220240e-51
MsaG029184	MsaG041517	0.802326	9.933761e-49	1.415850e-46
MsaG029184	MsaG041687	0.820584	1.113407e-52	2.486907e-50
MsaG029184	MsaG041888	0.831302	3.251595e-55	9.768254e-53
MsaG029184	MsaG042406	0.809436	3.232374e-50	5.445530e-48
MsaG029184	MsaG044063	0.816923	7.482029e-52	1.518981e-49
MsaG029184	MsaG044352	0.800848	1.989946e-48	2.742489e-46
MsaG029184	MsaG044354	0.808137	6.111245e-50	9.977909e-48
MsaG029184	MsaG044380	0.802344	9.849877e-49	1.404473e-46
MsaG029184	MsaG044439	0.824497	1.384673e-53	3.435691e-51
MsaG029184	MsaG044588	0.806736	1.207052e-49	1.906116e-47
MsaG029184	MsaG044782	0.801221	1.670639e-48	2.321850e-46
MsaG029184	MsaG046001	0.803505	5.685114e-49	8.325302e-47
MsaG029184	MsaG046120	0.802470	9.281424e-49	1.327203e-46
MsaG029184	MsaG046539	0.832282	1.868607e-55	5.776461e-53
MsaG029184	MsaG046588	0.809089	3.833292e-50	6.404036e-48
MsaG029184	MsaG001257	0.826183	5.550586e-54	1.442744e-51
MsaG029184	MsaG003538	0.801306	1.605704e-48	2.235960e-46
MsaG029184	MsaG013262	0.867424	2.784631e-65	2.900902e-62
MsaG029184	MsaG011840	0.807115	1.004875e-49	1.601020e-47
MsaG029184	MsaG021538	0.851202	1.976409e-60	1.116473e-57
MsaG029184	MsaG024399	0.815993	1.205650e-51	2.390004e-49
MsaG029184	MsaG033467	0.871033	1.898171e-66	2.298027e-63
MsaG029184	MsaG032243	0.838539	4.981447e-57	1.857889e-54
MsaG029184	MsaG031968	0.800398	2.455810e-48	3.350415e-46
MsaG029184	MsaG031902	0.875442	6.369054e-68	9.340925e-65
MsaG029184	MsaG031903	0.831885	2.339347e-55	7.149316e-53
MsaG029184	MsaG031711	0.806173	1.584947e-49	2.469756e-47
MsaG029184	MsaG033345	0.805175	2.561997e-49	3.900022e-47
MsaG029184	MsaG031316	0.848989	8.179386e-60	4.282752e-57
MsaG029184	MsaG032474	0.832639	1.525473e-55	4.764795e-53
MsaG029184	MsaG033454	0.845050	9.694540e-59	4.450031e-56
MsaG029184	MsaG036053	0.818218	3.832962e-52	8.045556e-50
MsaG029184	MsaG038131	0.841920	6.586913e-58	2.732355e-55
MsaG029184	MsaG039770	0.812475	7.152963e-51	1.297990e-48
MsaG029184	MsaG037023	0.865267	1.336060e-64	1.275931e-61
MsaG029184	MsaG035340	0.851262	1.901476e-60	1.076381e-57
MsaG029184	MsaG035272	0.842635	4.266843e-58	1.810955e-55
MsaG029184	MsaG045440	0.837066	1.185366e-56	4.225091e-54
MsaG029184	MsaG043831	0.807317	9.107370e-50	1.457998e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029184	MtrunA17_Chr5g0441581	90.272	257	25	0	136	392	424	680	1.31e-165	484
MsaG029184	MtrunA17_Chr5g0441581	97.351	151	4	0	1	151	1	151	6.95e-101	317
MsaG029184	MtrunA17_Chr6g0451441	63.636	154	45	3	7	151	61	212	2.64e-57	197
MsaG029184	MtrunA17_Chr1g0172041	68.142	113	36	0	208	320	1	113	9.85e-51	168
MsaG029184	MtrunA17_Chr6g0477261	39.604	202	121	1	136	336	285	486	1.23e-37	146
MsaG029184	MtrunA17_Chr2g0296781	38.614	202	123	1	136	336	396	597	9.89e-36	141
MsaG029184	MtrunA17_Chr1g0196541	36.150	213	123	3	140	351	406	606	7.74e-30	123
MsaG029184	MtrunA17_Chr5g0441591	88.889	63	7	0	421	483	1	63	8.38e-29	109
MsaG029184	MtrunA17_Chr5g0441571	71.429	77	14	1	420	488	227	303	3.65e-23	102
MsaG029184	MtrunA17_Chr5g0441651	68.831	77	16	1	420	488	235	311	2.36e-22	100
MsaG029184	MtrunA17_Chr1g0207551	31.414	191	114	4	136	322	436	613	1.45e-18	89.0
MsaG029184	MtrunA17_Chr3g0080351	29.756	205	129	3	136	337	470	662	6.57e-18	87.0
MsaG029184	MtrunA17_Chr5g0448761	29.237	236	148	6	136	360	471	698	1.12e-17	86.3
MsaG029184	MtrunA17_Chr6g0476441	39.604	101	60	1	237	336	2	102	4.49e-16	79.0
MsaG029184	MtrunA17_Chr3g0118611	29.464	224	141	6	152	371	363	573	5.71e-16	80.9
MsaG029184	MtrunA17_Chr2g0291581	26.860	242	164	6	117	349	443	680	1.21e-15	79.7
MsaG029184	MtrunA17_Chr5g0448511	31.288	163	101	4	136	295	243	397	2.24e-15	78.6
MsaG029184	MtrunA17_Chr5g0440451	29.843	191	122	4	152	337	466	649	6.69e-14	74.7
MsaG029184	MtrunA17_Chr2g0329031	27.848	237	150	7	115	347	395	614	7.08e-14	74.3
MsaG029184	MtrunA17_Chr2g0287061	33.846	130	74	4	168	293	578	699	7.53e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029184	AT5G12200.1	63.636	77	20	1	420	488	223	299	1.98e-20	94.7
MsaG029184	AT3G22170.2	26.531	245	148	4	113	337	424	656	4.86e-18	87.8
MsaG029184	AT3G22170.1	26.531	245	148	4	113	337	424	656	4.86e-18	87.8
MsaG029184	AT4G15090.1	27.642	246	157	5	136	376	456	685	8.27e-18	87.0
MsaG029184	AT4G15090.5	27.642	246	157	5	136	376	456	685	8.27e-18	87.0
MsaG029184	AT4G15090.3	27.642	246	157	5	136	376	456	685	8.27e-18	87.0
MsaG029184	AT4G15090.2	27.642	246	157	5	136	376	456	685	8.27e-18	87.0
MsaG029184	AT4G15090.4	27.642	246	157	5	136	376	456	685	8.27e-18	87.0
MsaG029184	AT2G32250.2	31.472	197	122	5	153	347	417	602	3.69e-16	82.0
MsaG029184	AT2G32250.4	31.472	197	122	5	153	347	417	602	3.69e-16	82.0
MsaG029184	AT2G32250.5	31.472	197	122	5	153	347	417	602	3.79e-16	82.0
MsaG029184	AT2G32250.6	31.472	197	122	5	153	347	417	602	4.03e-16	82.0
MsaG029184	AT2G32250.1	31.472	197	122	5	153	347	417	602	4.03e-16	82.0
MsaG029184	AT2G32250.3	31.472	197	122	5	153	347	417	602	4.03e-16	82.0
MsaG029184	AT2G32250.8	31.472	197	122	5	153	347	376	561	4.11e-16	81.6
MsaG029184	AT2G32250.7	31.472	197	122	5	153	347	376	561	4.45e-16	81.6
MsaG029184	AT4G38170.1	33.333	144	91	2	152	295	261	399	5.54e-16	80.9
MsaG029184	AT4G38180.1	32.867	143	91	2	153	295	497	634	1.76e-15	79.7
MsaG029184	AT1G52520.1	27.586	232	152	4	119	347	472	690	4.29e-15	78.6
MsaG029184	AT1G76320.3	24.265	272	194	4	153	423	410	670	9.41e-12	67.8
MsaG029184	AT1G76320.2	27.638	199	129	5	153	347	410	597	1.97e-11	67.0
MsaG029184	AT1G76320.1	27.638	199	129	5	153	347	410	597	2.06e-11	67.0
MsaG029184	AT1G76320.4	27.638	199	129	5	153	347	410	597	2.06e-11	67.0
MsaG029184	AT2G27110.2	26.203	187	128	4	153	337	442	620	8.21e-11	65.1
MsaG029184	AT2G27110.1	26.203	187	128	4	153	337	442	620	8.21e-11	65.1
MsaG029184	AT2G27110.3	28.966	145	94	3	153	295	297	434	9.12e-11	64.7

Find 80 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTTGAACTTCTTTGAATT+TGG	0.140264	5:-74192896	None:intergenic
TAGAGAGTATGCTTTGAAAA+AGG	0.184139	5:+74191592	MsaT029184.1:CDS
CGAGGGAGCACAATTCATTT+TGG	0.189374	5:-74192929	None:intergenic
CTTGGACTAACTGGTCTTAA+AGG	0.272670	5:+74194562	MsaT029184.1:CDS
TAAATTGATGTAATGTTTCA+TGG	0.277147	5:-74193335	None:intergenic
CTTCAAAGTTGTGTTTAATC+AGG	0.287821	5:+74193032	MsaT029184.1:CDS
GACCAGCCCTACAAAGAAAA+TGG	0.313866	5:+74191835	MsaT029184.1:CDS
TGTTCGTTGTTTGAGTTTAG+AGG	0.315013	5:+74193078	MsaT029184.1:CDS
ATGATAGAACTTGGACTAAC+TGG	0.323580	5:+74194553	MsaT029184.1:CDS
TGAATTCCAGCACCATTGTT+TGG	0.354475	5:-74193417	None:intergenic
TTCCAACTTAATACAAATCT+TGG	0.361351	5:-74191762	None:intergenic
TGCCAAGATTTGTATTAAGT+TGG	0.381892	5:+74191760	MsaT029184.1:CDS
TTGAAACTTCATGGATAGTT+CGG	0.390728	5:+74191439	None:intergenic
TGGAATTCACAGTCCATTGC+GGG	0.395864	5:+74193431	MsaT029184.1:CDS
TTAAAGGACATCTTCTTTCA+AGG	0.412333	5:+74194578	MsaT029184.1:CDS
GCATGTTGGAAGCCTGCAAC+GGG	0.415038	5:+74191530	MsaT029184.1:CDS
CTTTGCTACTTATCATGTGT+TGG	0.420954	5:+74192972	MsaT029184.1:CDS
TGCTACTTATCATGTGTTGG+AGG	0.424099	5:+74192975	MsaT029184.1:CDS
GCCATGGTCCATGCAGGAAA+TGG	0.426039	5:+74194502	MsaT029184.1:intron
ATCGTGAAGGTTCTAAAATC+AGG	0.426549	5:+74194810	MsaT029184.1:CDS
AATGTGTAGGAGTGCAATAT+TGG	0.431270	5:+74193589	MsaT029184.1:intron
CTGTCTGTCATTACTTCGCT+TGG	0.445713	5:-74193480	None:intergenic
AACATTCACAGCTGAAATCA+TGG	0.450961	5:-74193059	None:intergenic
TTGGAGGAGGTTGTAGTTGG+AGG	0.455878	5:+74192991	MsaT029184.1:CDS
ACATCAATTTAAGTGTAGTA+AGG	0.462673	5:+74193347	MsaT029184.1:CDS
CAACAGAAAATGATAGAACT+TGG	0.466596	5:+74194544	MsaT029184.1:CDS
ATTGAGGTTGTCAGTGGTGG+TGG	0.468328	5:+74193658	MsaT029184.1:CDS
TGTATTAAGTTGGAAAAGGA+TGG	0.471002	5:+74191770	MsaT029184.1:CDS
AGTTGGAAAAGGATGGTTTG+TGG	0.490374	5:+74191777	MsaT029184.1:CDS
GTGTTGGAGGAGGTTGTAGT+TGG	0.490830	5:+74192988	MsaT029184.1:CDS
GATTTGTATTAAGTTGGAAA+AGG	0.491914	5:+74191766	MsaT029184.1:CDS
TCAAATCCAAACAATGGTGC+TGG	0.496584	5:+74193411	MsaT029184.1:CDS
AATTGAAGCCACAGATGGAC+AGG	0.502360	5:+74193238	MsaT029184.1:CDS
AACTTAATACAAATCTTGGC+AGG	0.506782	5:-74191758	None:intergenic
ATCTGTGTGTTCACGAGAGA+GGG	0.507673	5:+74193122	MsaT029184.1:CDS
TGTAATGAGCATTGATGTAA+TGG	0.508685	5:+74194782	MsaT029184.1:CDS
ATTCTTGTTTGCACAAGAGA+GGG	0.511572	5:+74191674	MsaT029184.1:CDS
AATGGAGATGATGTTTATGC+AGG	0.512599	5:+74194520	MsaT029184.1:CDS
AGAATCTGAAGATGCAACTA+AGG	0.521210	5:+74193308	MsaT029184.1:CDS
CGGGTTAAATGTGAAGATCA+AGG	0.521428	5:+74193450	MsaT029184.1:CDS
TACTTATCATGTGTTGGAGG+AGG	0.523219	5:+74192978	MsaT029184.1:CDS
GCCTTAGCCATGGTCCATGC+AGG	0.523996	5:+74194496	MsaT029184.1:intron
ATCGAAATCAATGATGATGC+AGG	0.524055	5:+74191878	MsaT029184.1:CDS
GCAAACAAGAATTGCATAGC+AGG	0.525492	5:-74191663	None:intergenic
TGCACAAGAGAGGGGTCTCA+AGG	0.531486	5:+74191683	MsaT029184.1:CDS
ATCTATGTAGTTGGAAGGAG+AGG	0.532620	5:+74194725	MsaT029184.1:intron
TCTTCACATTTAACCCGCAA+TGG	0.533346	5:-74193444	None:intergenic
TAGTATTCATGATGAAGGTA+TGG	0.538379	5:+74191481	MsaT029184.1:CDS
CCCTCGTTGAATGTTGTCGA+GGG	0.543640	5:+74192946	MsaT029184.1:CDS
TGTGATAGTATTCATGATGA+AGG	0.546656	5:+74191476	MsaT029184.1:CDS
CAATTTAAGTGTAGTAAGGA+TGG	0.555667	5:+74193351	MsaT029184.1:CDS
TTTATATCTATGTAGTTGGA+AGG	0.557118	5:+74194720	MsaT029184.1:intron
TATCTGTGTGTTCACGAGAG+AGG	0.565938	5:+74193121	MsaT029184.1:CDS
TTGTCAAACCTGTCCATCTG+TGG	0.569297	5:-74193246	None:intergenic
CATCATCTCCATTTCCTGCA+TGG	0.572541	5:-74194510	None:intergenic
TCCCTCGTTGAATGTTGTCG+AGG	0.574922	5:+74192945	MsaT029184.1:CDS
CTGGAATTCACAGTCCATTG+CGG	0.575404	5:+74193430	MsaT029184.1:CDS
TGGCATGAGTGTACTCACCT+TGG	0.576261	5:-74192876	None:intergenic
AATTCTTGTTTGCACAAGAG+AGG	0.579543	5:+74191673	MsaT029184.1:CDS
CTATGTAGAATCATCTATTG+AGG	0.583723	5:+74193642	MsaT029184.1:CDS
TCCATTTCCTGCATGGACCA+TGG	0.584019	5:-74194503	None:intergenic
AGCATGTTGGAAGCCTGCAA+CGG	0.586912	5:+74191529	MsaT029184.1:CDS
TCCATTGAAAAGCAATTCCA+AGG	0.588119	5:+74192859	MsaT029184.1:CDS
AGTTGCATCTTCAGATTCTG+CGG	0.590083	5:-74193304	None:intergenic
TCTATTGAGGTTGTCAGTGG+TGG	0.597149	5:+74193655	MsaT029184.1:CDS
ATGGAGATGATGTTTATGCA+GGG	0.598515	5:+74194521	MsaT029184.1:CDS
CTGATGATGATGAAGCATGT+TGG	0.601790	5:+74191516	MsaT029184.1:CDS
TCTTCTTTCAAGGCGTGCAG+TGG	0.604982	5:+74194588	MsaT029184.1:CDS
GATGACTCAAATCCAAACAA+TGG	0.622244	5:+74193405	MsaT029184.1:CDS
TTCTTGTTTGCACAAGAGAG+GGG	0.624091	5:+74191675	MsaT029184.1:CDS
GCACAAGAGAGGGGTCTCAA+GGG	0.625092	5:+74191684	MsaT029184.1:CDS
GAGAGAATTGAAGCCACAGA+TGG	0.631735	5:+74193233	MsaT029184.1:CDS
TCATCTATTGAGGTTGTCAG+TGG	0.640747	5:+74193652	MsaT029184.1:CDS
CCCTCGACAACATTCAACGA+GGG	0.645738	5:-74192946	None:intergenic
CAGATAACACATGACAACAC+AGG	0.666939	5:-74193104	None:intergenic
TCGCGCTATTCACTTATACG+TGG	0.671636	5:+74194755	MsaT029184.1:CDS
GTAGGAGTGCAATATTGGAA+TGG	0.673951	5:+74193594	MsaT029184.1:intron
TGTAATGGAAGAAATCGTGA+AGG	0.687566	5:+74194797	MsaT029184.1:CDS
CATGTTGGAAGCCTGCAACG+GGG	0.757747	5:+74191531	MsaT029184.1:CDS
ACCCTCGACAACATTCAACG+AGG	0.768012	5:-74192947	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	74191449	74194845	74191449	ID=MsaG029184
Chr5	mRNA	74191449	74194845	74191449	ID=MsaT029184.1;Parent=MsaG029184
Chr5	exon	74191449	74191901	74191449	ID=MsaT029184.1.exon1;Parent=MsaT029184.1
Chr5	CDS	74191449	74191901	74191449	ID=cds.MsaT029184.1;Parent=MsaT029184.1
Chr5	exon	74192766	74193488	74192766	ID=MsaT029184.1.exon2;Parent=MsaT029184.1
Chr5	CDS	74192766	74193488	74192766	ID=cds.MsaT029184.1;Parent=MsaT029184.1
Chr5	exon	74193598	74193679	74193598	ID=MsaT029184.1.exon3;Parent=MsaT029184.1
Chr5	CDS	74193598	74193679	74193598	ID=cds.MsaT029184.1;Parent=MsaT029184.1
Chr5	exon	74194503	74194609	74194503	ID=MsaT029184.1.exon4;Parent=MsaT029184.1
Chr5	CDS	74194503	74194609	74194503	ID=cds.MsaT029184.1;Parent=MsaT029184.1
Chr5	exon	74194735	74194845	74194735	ID=MsaT029184.1.exon5;Parent=MsaT029184.1
Chr5	CDS	74194735	74194845	74194735	ID=cds.MsaT029184.1;Parent=MsaT029184.1

Gene Sequence

>MsaT029184.1

ATGGATAGTTCGGAGAATTTAGTAGACTGTGATAGTATTCATGATGAAGGTATGGAAGTTGATAACTCTGATGATGATGAAGCATGTTGGAAGCCTGCAACGGGGATGCGTTTTTCTTGCATAGATGATGTCAAGACACTTTATAGAGAGTATGCTTTGAAAAAGGGTTTTCGGTGGAAGACCAGAACATCGAAAAAAAGAGATGATGGAGAGACCTGCTATGCAATTCTTGTTTGCACAAGAGAGGGGTCTCAAGGGTCAGAAATTCCGTGTACGTTAAAGACACCCCCACCTAAGACAAAAAATTGTCCTGCCAAGATTTGTATTAAGTTGGAAAAGGATGGTTTGTGGTACATTTCAAAATTTGAATCTAGACATTCTCACAAGACCAGCCCTACAAAGAAAATGGACTTGCATGTAAAGAGAACAATCGAAATCAATGATGATGCAGGACAATATGATAATGCTCTTAGTAGTCGAGCAGAAAAAGAATTTGAAGCGGATTTTAATTCACTGGATACTACAATTCAGTGTGTGTCAAACTCGTCCATTGAAAAGCAATTCCAAGGTGAGTACACTCATGCCAAATTCAAAGAAGTTCAAGCTGAATTCATATCCAAAATGAATTGTGCTCCCTCGTTGAATGTTGTCGAGGGTTGCTTTGCTACTTATCATGTGTTGGAGGAGGTTGTAGTTGGAGGCAGACATAAAGAAAATGTCTTCAAAGTTGTGTTTAATCAGGAAAACCATGATTTCAGCTGTGAATGTTCGTTGTTTGAGTTTAGAGGTATCCTGTGTTGTCATGTGTTATCTGTGTGTTCACGAGAGAGGGTTAAAAATGTGGCAGAGAAGTATGTTTTAACAAGATGGAAGAAAAATATTAAAAGGAAGCATTCATATATTAAGAGTAGTTATTGCGCGAGAGAATTGAAGCCACAGATGGACAGGTTTGACAAATTGTGCAAGCATTTCTATGAGATTGCTGAAGTAGCCGCAGAATCTGAAGATGCAACTAAGGCACTCCATGAAACATTACATCAATTTAAGTGTAGTAAGGATGGTATAACTGACATTGTTAACAGAAGTTTCATTGATGACTCAAATCCAAACAATGGTGCTGGAATTCACAGTCCATTGCGGGTTAAATGTGAAGATCAAGGAAATGAACCAAGCGAAGAGTGCAATATTGGAATGGTGAGAAATCAGATCGAAAGCAACATCTATGTAGAATCATCTATTGAGGTTGTCAGTGGTGGTGCCATGGTCCATGCAGGAAATGGAGATGATGTTTATGCAGGGCAACAGAAAATGATAGAACTTGGACTAACTGGTCTTAAAGGACATCTTCTTTCAAGGCGTGCAGTGTTGGAAGGAGAGGCAACTTCTCGCGCTATTCACTTATACGTGGTTCATGTAATGAGCATTGATGTAATGGAAGAAATCGTGAAGGTTCTAAAATCAGGTTCTTCGTCTTAA

Protein sequence

>MsaT029184.1

MDSSENLVDCDSIHDEGMEVDNSDDDEACWKPATGMRFSCIDDVKTLYREYALKKGFRWKTRTSKKRDDGETCYAILVCTREGSQGSEIPCTLKTPPPKTKNCPAKICIKLEKDGLWYISKFESRHSHKTSPTKKMDLHVKRTIEINDDAGQYDNALSSRAEKEFEADFNSLDTTIQCVSNSSIEKQFQGEYTHAKFKEVQAEFISKMNCAPSLNVVEGCFATYHVLEEVVVGGRHKENVFKVVFNQENHDFSCECSLFEFRGILCCHVLSVCSRERVKNVAEKYVLTRWKKNIKRKHSYIKSSYCARELKPQMDRFDKLCKHFYEIAEVAAESEDATKALHETLHQFKCSKDGITDIVNRSFIDDSNPNNGAGIHSPLRVKCEDQGNEPSEECNIGMVRNQIESNIYVESSIEVVSGGAMVHAGNGDDVYAGQQKMIELGLTGLKGHLLSRRAVLEGEATSRAIHLYVVHVMSIDVMEEIVKVLKSGSSS*