AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG029246


Find 326 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
Chr5 gene 75045693 75066968 75045693 ID=MsaG029246
Chr5 mRNA 75045693 75066968 75045693 ID=MsaT029246.1;Parent=MsaG029246
Chr5 exon 75045693 75046138 75045693 ID=MsaT029246.1.exon29;Parent=MsaT029246.1
Chr5 CDS 75045693 75046138 75045693 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75046391 75046484 75046391 ID=MsaT029246.1.exon28;Parent=MsaT029246.1
Chr5 CDS 75046391 75046484 75046391 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75046565 75046912 75046565 ID=MsaT029246.1.exon27;Parent=MsaT029246.1
Chr5 CDS 75046565 75046912 75046565 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75048293 75048474 75048293 ID=MsaT029246.1.exon26;Parent=MsaT029246.1
Chr5 CDS 75048293 75048474 75048293 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75048563 75048740 75048563 ID=MsaT029246.1.exon25;Parent=MsaT029246.1
Chr5 CDS 75048563 75048740 75048563 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75049017 75049172 75049017 ID=MsaT029246.1.exon24;Parent=MsaT029246.1
Chr5 CDS 75049017 75049172 75049017 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75049622 75049858 75049622 ID=MsaT029246.1.exon23;Parent=MsaT029246.1
Chr5 CDS 75049622 75049858 75049622 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75050007 75050087 75050007 ID=MsaT029246.1.exon22;Parent=MsaT029246.1
Chr5 CDS 75050007 75050087 75050007 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75050192 75050374 75050192 ID=MsaT029246.1.exon21;Parent=MsaT029246.1
Chr5 CDS 75050192 75050374 75050192 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75050579 75050668 75050579 ID=MsaT029246.1.exon20;Parent=MsaT029246.1
Chr5 CDS 75050579 75050668 75050579 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75050850 75050960 75050850 ID=MsaT029246.1.exon19;Parent=MsaT029246.1
Chr5 CDS 75050850 75050960 75050850 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75051040 75051282 75051040 ID=MsaT029246.1.exon18;Parent=MsaT029246.1
Chr5 CDS 75051040 75051282 75051040 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75052257 75052469 75052257 ID=MsaT029246.1.exon17;Parent=MsaT029246.1
Chr5 CDS 75052257 75052469 75052257 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75053914 75053977 75053914 ID=MsaT029246.1.exon16;Parent=MsaT029246.1
Chr5 CDS 75053914 75053977 75053914 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75054062 75054186 75054062 ID=MsaT029246.1.exon15;Parent=MsaT029246.1
Chr5 CDS 75054062 75054186 75054062 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75055225 75055318 75055225 ID=MsaT029246.1.exon14;Parent=MsaT029246.1
Chr5 CDS 75055225 75055318 75055225 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75056198 75056265 75056198 ID=MsaT029246.1.exon13;Parent=MsaT029246.1
Chr5 CDS 75056198 75056265 75056198 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75056361 75056552 75056361 ID=MsaT029246.1.exon12;Parent=MsaT029246.1
Chr5 CDS 75056361 75056552 75056361 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75057919 75058053 75057919 ID=MsaT029246.1.exon11;Parent=MsaT029246.1
Chr5 CDS 75057919 75058053 75057919 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75058138 75058225 75058138 ID=MsaT029246.1.exon10;Parent=MsaT029246.1
Chr5 CDS 75058138 75058225 75058138 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75058296 75058389 75058296 ID=MsaT029246.1.exon9;Parent=MsaT029246.1
Chr5 CDS 75058296 75058389 75058296 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75060012 75060075 75060012 ID=MsaT029246.1.exon8;Parent=MsaT029246.1
Chr5 CDS 75060012 75060075 75060012 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75061323 75061374 75061323 ID=MsaT029246.1.exon7;Parent=MsaT029246.1
Chr5 CDS 75061323 75061374 75061323 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75061595 75061698 75061595 ID=MsaT029246.1.exon6;Parent=MsaT029246.1
Chr5 CDS 75061595 75061698 75061595 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75061781 75061840 75061781 ID=MsaT029246.1.exon5;Parent=MsaT029246.1
Chr5 CDS 75061781 75061840 75061781 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75062398 75062481 75062398 ID=MsaT029246.1.exon4;Parent=MsaT029246.1
Chr5 CDS 75062398 75062481 75062398 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75062679 75062903 75062679 ID=MsaT029246.1.exon3;Parent=MsaT029246.1
Chr5 CDS 75062679 75062903 75062679 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75066170 75066607 75066170 ID=MsaT029246.1.exon2;Parent=MsaT029246.1
Chr5 CDS 75066170 75066607 75066170 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Chr5 exon 75066960 75066968 75066960 ID=MsaT029246.1.exon1;Parent=MsaT029246.1
Chr5 CDS 75066960 75066968 75066960 ID=cds.MsaT029246.1;Parent=MsaT029246.1
Gene Sequence

>MsaT029246.1

ATGCATGGAGATAAAGATTGGGAAGGTGAAGGATCGGATGAAAATGATGACAGTGATGAAAGCCTAGATGTTTCTGATGATGACGAATCTTTCTATACTAAAAAAGCCAAGGGAAGGCAACGAGGTAAGGTTGGAAAAAGTATAAAATCTACCAGAGATCGCAAAGCATGTGTTGCATCTAGCAGACAAAGAAGATTAAAATCATCTTTTGAAGACAATGAGTCTACAACAGACGATTCTGACAGTGTTAGTGATGACGATTTTAAAAGCACAAGAAAGAGAAGTTTCAATGTTCGGAAGAATAACAGCCGCTTTTCTGTAAACACAAGTTTTTCTGCGCACAACAGTGACGTTCGCACTTCTAGTAGGGCTGTTAGGAAGATATCGTATGTTGAAAGTGATGGAAGTGAAGAAGCTGATGATGGGAAGAAGAAAAAGTCTCAAAAGGAAGAAATTGAAGAGGATGATGGCGACTCTATTGAAAAGGTGCTTTGGCATCAGCTGAAGGGCACAGCTGAAGACGCTCAAAGTAATAATAGATCAACAGAGCCTGTTTTAATGAGTCACTTGTTTGATTCTGAATTTGATTGGAATGAGATTGAATTTTTGATAAAATGGAAGGGGCAATCTCATTTGCACTGTCAATGGAAGACTTTCGCAGAGCTACAAAATCTCAGTGGCTTTAAGAAGGTTTTAAATTATACAAAGAAAATAATGGAGGACATCAGGTACCGGAGAGCAATCTCAAGAGAGGAGATTGAGGTCTATGATGTGAGCAAGGAGATGGATTTAGAAATTATCAGGCAGAACAGTCAGGTGGAAAGAATAATTGCAGATAGGATAAGTAAAGATAATTCTGGCAATGTTGTCCCAGAATACCTGGTCAAGTGGCAAGGACTATCTTATGCTGAAGTGACTTGGGAAAAGGACATTGATATCGCTTTTGCCCAACATTCGATCGATGAGTATAAGGCTCGAGAGGCTGCAATGTCAGTTCAAGGAAAGGTGGTAGATTCCCAGCGCAAGAAGAGCAAAGCAAGTTTGCGGAAGCTTGAGGAACAGCCTGAATGGTTGAAGGGTGGAAAGCTCCGTGATTATCAACTTGAGGGTTTGAATTTTCTTGTTAACAGCTGGAGAAATGATACAAATGTCATTTTAGCTGATGAAATGGGTCTTGGGAAAACTGTTCAATCAGTATCGATGCTTGGTTTTCTACAGAATGCCCAGCAAATCCATGGCCCTTTTCTTGTAGTTGTGCCGTTGTCTACTTTATCAAACTGGGCCAAAGAATTCAGGAAGTGGCTTCCTGATATGAATATTATTGTATATGTTGGCACTCGAGCAAGTCGAGAGGTTTGTCAACAGTATGAGTTTTATAATGACAAAAAGCCTGGTAAACCAATAAAATTCAATGCACTGTTGACTACATATGAAGTAATTTTGAAAGATAAGGCTGTTCTCTCCAAGATCAAATGGAATTATCTGATGGTAGATGAGGCTCATAGACTAAAAAATAGCGAGGCACAGTTGTATACATCACTTTTAGAATTTAGCACCAAGAATAAGTTGCTCATCACCGGTACTCCTTTACAAAACAGTGTTGAAGAGCTATGGGCTTGCCTCCACTTCCATCATCCTACCCAATTCAAGAGCAAGGATGAGTTTGTTCAAAACTATAAGAATCTGAGTTCTTTCCATGAGAATGAGCTTGCAAATCTTCATATGGAATTGAGACCACACATACTTCGAAGAGTTATCAAAGATGTAGAGAAATCTTTACCCCCTAAAATTGAGCGCATCCTTAGGGTTGAAATGTCTCCTCTTCAGAAACAGTATTATAAGTGGATTTTGGAACGTAACTTCCAAAATTTAAACAAAGGAGTTCGTGGGAATCAGGTTTCTCTTCTAAATATTGTGGTGGAATTGAAAAAGTGTTGCAACCATCCCTTCCTATTTGAAAGTGCTGACCATGGCTATGGTGGGGACTCTGGAGGTAATGACAACAGTAAACTCGAGAGAATTGTCTTTAGCAGTGGGAAGCTTGTGATACTTGATAAGCTTCTTGTTAGATTGCACGAAACCAAGCATCGCGTTCTGATTTTCTCTCAGATGGTTAGGATGTTGGATATATTGGCACAATACTTGTCACTTCGAGGGTTTCAATTTCAAAGGCTTGATGGGAGCACAAAATCTGAGCTGCGACAGCAGGCAATGGAGCATTTCAATGCACCTGGTAGTGATGATTTTTGCTTCCTTCTTTCAACACGGGCAGGAGGTCTAGGTATCAACCTTGCCACGGCAGACACTGTCATTATATTTGATTCAGACTGGAATCCTCAAAATGACCTGCAGGCAATGAGTAGAGCTCATAGAATAGGGCAACAAGATGTTGTCAACATATATAGATTTGTGACAAGCAAAAGTGTTGAAGAAGATATTCTGGAGCGTGCTAAGAAGAAGATGGTTCTGGACCACTTGGTGATTCAAAAACTGAATGCAGAAGGTAGACTGGAGAAGAAAGAAGTCAAAAAAGGAGGAAGTTACTTTGATAAAAACGAGCTGTCTGCAATCTTACGATTTGGAGCGGAAGAGCTTTTTAAGGAAGAAAGAAATGATGAAGAAAGCAAGAAACGACTCTTAGGTATGAATATAGATGAGATTCTTGAAAGAGCTGAGAAGGTTGAAGAGAAGACAGATGAAGACGAACAAGGGAATGAGTTATTAAGTGCATTTAAGGTTGCTAATTTTTGCAATGATGAAGATGATGCAAGTTTCTGGAGTCGTTGGATAAAGCCCGATGCTGCATTCCAAGCAGAGGAAGCTCTTGCTCCGCGTTCTGCAAGAAATATTAAAAGCTATGCCGAGGCTGATCCATCTGAAAGGAGTAATAAAAGGAAAAAGAAGGAACCTGAGCCACCTGAACGAGTTCAGAAACGCCGCAAAGCAGAACATTCGGCTCCTGCAGTACCAATGGTTGATGGAGCCTCTGTCCAAGTTAGAAGTTGGTCATATGGGAATTTATCAAAAAGAGATGCACTCCGATTTTCTCGTGCCGTTATGAAATACGGGAATGAGAACCAAATCGACTTAATTGCTGCTGACGTTGGTGGGGCAGTTGCCGCAGCTTCACCTGAAGCACAGATTGAACTTTTCAATGCTCTAATTGATGGTTGTTCAGAAGCTGTGGAAATTGGAAATCTGGATATAAAGGGGCCTGTTCTAGATTTTTTTGGTGTCCCTGTGAAAGCAAATGATCTTGTTACCCGTGTCCAAGAGCTTCAACTCCTAGCAAAGCGCATTAGCCGGTATGAAGATCCCCTTGCACAGTTCCGTGTTTTATCGTATCTCAAGCCTTCAAACTGGTCGAAAGGTTGTGGGTGGAATCAAATTGATGATGCAAGATTGCTTCTTGGAGTACATTACCATGGATTTGGTAATTGGGAAATGATTAGATTAGATGAAAGGCTTGGCCTCATGAAAAAAATAGCACCTGTAGAACTCCAAAACCATGAAACTTTCTTGCCACGAGCTCCAAATTTGAGAGACCGTGCCAATGCCCTTCTGGAACAAGAACTTGTTGTTCTTGGGGTAAAAAATGCAAATAGCAGAGTTGCACGGAAGCCTTCCAAGAAAGAGAAAGAACATATGATGAATATCTCATTGTTGCGTGGACAGGAGAAGAAGAAAAAATCGGGTTCTGTTAATGTCCAAATGAGAAAGGATAGGTTTCAGAAACCCCGAAAGGTTGAGCCTATTGTAAAAGAGGAAGGTGAAATGTCCGACAATGAGGAAGTATATGAGCAGTTTAAGGAGGTAAAATGGATGGAATGGTGTCAAGATGTGATGGTTGAAGAAATGAAAACTTTGAAGCGTCTTCACAGATTGCAGACAACTAGTGCTAATCTTCCAAAGGAAAAGGTTCTTTCAAAAATACGCAACTATTTACAACTTCTTGGACGAAGAATTGATCAAATTGTGTTGGAAAATGAAGTGGAACCCTATAAGCAAGATAGAATGACTGTACGACTGTGGAAATATGTATCCACCTTTTCCCATCTTTCAGGGGAGAGGCTCCATCAAATATATTCCAAACTTAAACAGGAACAAGAAGATGATGGTGGGGTTGGTCCCTCTGCTTCATTTAGCAGAAATGGAAACCCATTCCATCGCCACATGGAGAGGCAAAGAGGATTTAAAAATGCGGCTAACTACCAAATGTCAGAACCTGATAATAATACAGGAAAATCTGAGGCATGGAAACGAAGAAGAAGAGCTGAAAGTGAGGATCATTTCCAGTGTCAGCCCCCACCTCAAAGAACCTCTAGTAATGGAATCCGGATTACTGATCCTAATTCACTTGGGATCCTTGGTGCTGGACCATCTGACAAACGGTTGGTCAGCGAGAAACCTTTTAGGACACAACCTGGTGGGTTTCCTTCAAGTCAAGGTTTTTCCTAA

Protein sequence

>MsaT029246.1

MHGDKDWEGEGSDENDDSDESLDVSDDDESFYTKKAKGRQRGKVGKSIKSTRDRKACVASSRQRRLKSSFEDNESTTDDSDSVSDDDFKSTRKRSFNVRKNNSRFSVNTSFSAHNSDVRTSSRAVRKISYVESDGSEEADDGKKKKSQKEEIEEDDGDSIEKVLWHQLKGTAEDAQSNNRSTEPVLMSHLFDSEFDWNEIEFLIKWKGQSHLHCQWKTFAELQNLSGFKKVLNYTKKIMEDIRYRRAISREEIEVYDVSKEMDLEIIRQNSQVERIIADRISKDNSGNVVPEYLVKWQGLSYAEVTWEKDIDIAFAQHSIDEYKAREAAMSVQGKVVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVILKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTSLLEFSTKNKLLITGTPLQNSVEELWACLHFHHPTQFKSKDEFVQNYKNLSSFHENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGGNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAQYLSLRGFQFQRLDGSTKSELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEVKKGGSYFDKNELSAILRFGAEELFKEERNDEESKKRLLGMNIDEILERAEKVEEKTDEDEQGNELLSAFKVANFCNDEDDASFWSRWIKPDAAFQAEEALAPRSARNIKSYAEADPSERSNKRKKKEPEPPERVQKRRKAEHSAPAVPMVDGASVQVRSWSYGNLSKRDALRFSRAVMKYGNENQIDLIAADVGGAVAAASPEAQIELFNALIDGCSEAVEIGNLDIKGPVLDFFGVPVKANDLVTRVQELQLLAKRISRYEDPLAQFRVLSYLKPSNWSKGCGWNQIDDARLLLGVHYHGFGNWEMIRLDERLGLMKKIAPVELQNHETFLPRAPNLRDRANALLEQELVVLGVKNANSRVARKPSKKEKEHMMNISLLRGQEKKKKSGSVNVQMRKDRFQKPRKVEPIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVLENEVEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLKQEQEDDGGVGPSASFSRNGNPFHRHMERQRGFKNAANYQMSEPDNNTGKSEAWKRRRRAESEDHFQCQPPPQRTSSNGIRITDPNSLGILGAGPSDKRLVSEKPFRTQPGGFPSSQGFS*