AlfalfaGEDB | MsaG029578

M. sativa ssp. caerulea / MsaG029578

KEGG: -
GO: GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029578	XP_003617695.1	95.255	548	23	1	1	548	1	545	0.0	1077

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029578	sp\|Q93WV0\|WRK20_ARATH	54.927	548	195	15	27	548	36	557	2.11e-178	517

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029578	tr\|G7K4D8\|G7K4D8_MEDTR	95.255	548	23	1	1	548	1	545	0.0	1077

TFs/TRs:

Gene ID	Type	Classification
MsaG029578	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000253	MsaG029578	0.808905	4.196416e-50	6.979571e-48
MsaG001045	MsaG029578	0.828625	1.450738e-54	4.037476e-52
MsaG001270	MsaG029578	0.833061	1.199491e-55	3.793331e-53
MsaG001852	MsaG029578	0.801419	1.522334e-48	2.125362e-46
MsaG003237	MsaG029578	0.846225	4.670398e-59	2.228562e-56
MsaG005038	MsaG029578	0.804098	4.286753e-49	6.364795e-47
MsaG005613	MsaG029578	0.825545	7.853253e-54	2.005401e-51
MsaG009327	MsaG029578	0.814960	2.041763e-51	3.942961e-49
MsaG010028	MsaG029578	0.817892	4.537834e-52	9.445068e-50
MsaG010965	MsaG029578	0.803771	5.010752e-49	7.383086e-47
MsaG015144	MsaG029578	0.829969	6.869727e-55	1.986425e-52
MsaG016118	MsaG029578	0.803803	4.935032e-49	7.276875e-47
MsaG016159	MsaG029578	0.801344	1.576881e-48	2.197771e-46
MsaG016570	MsaG029578	0.803025	7.139253e-49	1.033953e-46
MsaG018148	MsaG029578	0.815681	1.413952e-51	2.780885e-49
MsaG018705	MsaG029578	0.810946	1.533589e-50	2.680030e-48
MsaG020738	MsaG029578	0.801456	1.496033e-48	2.090403e-46
MsaG023997	MsaG029578	0.811668	1.071012e-50	1.905066e-48
MsaG024311	MsaG029578	0.828893	1.250422e-54	3.506249e-52
MsaG025643	MsaG029578	0.803854	4.816224e-49	7.110054e-47
MsaG025838	MsaG029578	0.818673	3.026881e-52	6.428677e-50
MsaG026675	MsaG029578	0.813978	3.358178e-51	6.327116e-49
MsaG027084	MsaG029578	0.830839	4.218264e-55	1.250464e-52
MsaG027460	MsaG029578	0.861529	1.900250e-63	1.566022e-60
MsaG029029	MsaG029578	0.827686	2.435898e-54	6.602910e-52
MsaG029578	MsaG029630	0.800659	2.173955e-48	2.983471e-46
MsaG029578	MsaG030779	0.810460	1.951035e-50	3.369450e-48
MsaG029578	MsaG032036	0.800406	2.446707e-48	3.338603e-46
MsaG029578	MsaG032554	0.805618	2.070234e-49	3.184049e-47
MsaG029578	MsaG032927	0.825876	6.559660e-54	1.690605e-51
MsaG029578	MsaG033892	0.809901	2.571963e-50	4.381674e-48
MsaG029578	MsaG035166	0.801678	1.348191e-48	1.893301e-46
MsaG029578	MsaG035271	0.804311	3.873578e-49	5.779542e-47
MsaG029578	MsaG037421	0.812220	8.127128e-51	1.465371e-48
MsaG029578	MsaG038520	0.815194	1.813163e-51	3.522242e-49
MsaG029578	MsaG038522	0.823682	2.146784e-53	5.210092e-51
MsaG029578	MsaG040209	0.809934	2.529437e-50	4.312650e-48
MsaG029578	MsaG042057	0.835244	3.423557e-56	1.155117e-53
MsaG029578	MsaG043229	0.833747	8.104900e-56	2.615403e-53
MsaG029578	MsaG046600	0.827035	3.483563e-54	9.271840e-52
MsaG029578	MsaG046830	0.808554	4.984625e-50	8.220539e-48
MsaG029578	MsaG046967	0.806364	1.445318e-49	2.262399e-47
MsaG029578	MsaG001594	0.802642	8.559131e-49	1.228744e-46
MsaG029578	MsaG001871	0.801926	1.199565e-48	1.694130e-46
MsaG029578	MsaG003314	0.815663	1.427551e-51	2.806302e-49
MsaG029578	MsaG008774	0.810290	2.121629e-50	3.648858e-48
MsaG029578	MsaG012600	0.806469	1.373782e-49	2.155838e-47
MsaG029578	MsaG023034	0.817373	5.932793e-52	1.218493e-49
MsaG029578	MsaG019332	0.801927	1.198843e-48	1.693157e-46
MsaG029578	MsaG019500	0.817113	6.785304e-52	1.384302e-49
MsaG029578	MsaG033446	0.800900	1.942217e-48	2.679834e-46
MsaG029578	MsaG042570	0.840690	1.383071e-57	5.517296e-55

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029578	MtrunA17_Chr5g0445311	95.255	548	23	1	1	548	1	545	0.0	1077
MsaG029578	MtrunA17_Chr3g0101131	67.647	578	137	8	15	548	24	595	0.0	753
MsaG029578	MtrunA17_Chr3g0079691	43.524	471	170	12	41	433	109	561	6.08e-96	306
MsaG029578	MtrunA17_Chr3g0079691	48.148	81	39	2	203	280	495	575	7.20e-14	74.7
MsaG029578	MtrunA17_Chr5g0432161	43.213	442	154	12	45	431	86	485	1.07e-89	287
MsaG029578	MtrunA17_Chr5g0432161	50.704	71	21	2	203	259	421	491	1.34e-12	70.5
MsaG029578	MtrunA17_Chr3g0106491	44.389	401	187	9	39	431	57	429	4.20e-88	281
MsaG029578	MtrunA17_Chr7g0218081	40.265	452	209	11	29	462	95	503	8.32e-87	278
MsaG029578	MtrunA17_Chr5g0418191	51.557	289	122	7	202	481	150	429	1.23e-81	261
MsaG029578	MtrunA17_Chr7g0243891	40.678	413	178	10	51	432	63	439	3.99e-80	261
MsaG029578	MtrunA17_Chr7g0249311	48.621	290	94	3	196	433	172	458	2.58e-78	259
MsaG029578	MtrunA17_Chr4g0004911	40.102	394	179	13	47	429	51	398	4.69e-74	243
MsaG029578	MtrunA17_Chr4g0042831	49.804	255	91	4	185	436	127	347	3.18e-73	238
MsaG029578	MtrunA17_Chr4g0042831	36.232	138	77	3	367	503	145	272	1.01e-13	73.2
MsaG029578	MtrunA17_Chr7g0263531	46.494	271	136	4	164	426	151	420	5.40e-72	236
MsaG029578	MtrunA17_Chr5g0447701	42.800	250	127	5	202	445	91	330	7.45e-52	182
MsaG029578	MtrunA17_Chr5g0447701	50.000	64	31	1	365	428	90	152	1.49e-12	69.3
MsaG029578	MtrunA17_Chr4g0074001	40.909	242	124	6	202	429	185	421	7.50e-49	177
MsaG029578	MtrunA17_Chr4g0074001	53.731	67	30	1	202	267	358	424	5.22e-15	77.8
MsaG029578	MtrunA17_Chr7g0249301	78.049	82	18	0	348	429	273	354	4.17e-41	152
MsaG029578	MtrunA17_Chr7g0249301	53.774	106	46	2	196	299	55	159	1.24e-26	111
MsaG029578	MtrunA17_Chr7g0249301	59.016	61	24	1	366	426	61	120	9.50e-15	76.3
MsaG029578	MtrunA17_Chr7g0249301	55.000	60	26	1	203	261	292	351	1.03e-12	70.1
MsaG029578	MtrunA17_Chr5g0447711	32.192	292	143	6	163	434	41	297	1.92e-36	137
MsaG029578	MtrunA17_Chr1g0188941	69.737	76	23	0	351	426	35	110	1.08e-33	124
MsaG029578	MtrunA17_Chr1g0188941	50.000	62	30	1	203	263	51	112	1.13e-15	73.2
MsaG029578	MtrunA17_Chr8g0335811	61.250	80	31	0	344	423	131	210	5.57e-30	117
MsaG029578	MtrunA17_Chr8g0335811	49.367	79	39	1	188	265	139	217	3.86e-15	75.1
MsaG029578	MtrunA17_Chr3g0129361	63.514	74	27	0	350	423	127	200	1.25e-29	116
MsaG029578	MtrunA17_Chr3g0129361	46.835	79	38	2	188	265	129	204	1.35e-13	70.5
MsaG029578	MtrunA17_Chr7g0270191	59.770	87	35	0	351	437	129	215	1.23e-28	115
MsaG029578	MtrunA17_Chr7g0270191	41.781	146	78	5	204	345	146	288	2.03e-19	89.0
MsaG029578	MtrunA17_Chr5g0418781	57.292	96	37	2	348	442	105	197	4.49e-28	113
MsaG029578	MtrunA17_Chr5g0418781	62.500	56	20	1	204	258	125	180	1.58e-14	74.3
MsaG029578	MtrunA17_Chr8g0383351	61.333	75	28	1	350	423	142	216	5.23e-28	112
MsaG029578	MtrunA17_Chr8g0383351	53.125	64	26	2	203	265	160	220	1.23e-13	70.9
MsaG029578	MtrunA17_Chr2g0294231	57.609	92	39	0	351	442	187	278	5.54e-28	115
MsaG029578	MtrunA17_Chr2g0294231	51.282	78	37	1	188	264	188	265	2.36e-15	78.2
MsaG029578	MtrunA17_Chr1g0194481	58.140	86	36	0	347	432	138	223	1.13e-27	113
MsaG029578	MtrunA17_Chr1g0194481	50.000	84	41	1	188	270	143	226	1.12e-16	81.3
MsaG029578	MtrunA17_Chr4g0051881	63.158	76	28	0	353	428	164	239	1.81e-27	113
MsaG029578	MtrunA17_Chr4g0051881	59.322	59	23	1	204	261	179	237	5.64e-15	76.3
MsaG029578	MtrunA17_Chr5g0443131	61.333	75	29	0	353	427	143	217	8.94e-27	110
MsaG029578	MtrunA17_Chr5g0443131	57.627	59	24	1	204	261	158	216	2.78e-13	70.9
MsaG029578	MtrunA17_Chr1g0150801	59.211	76	30	1	348	423	84	158	1.32e-26	105
MsaG029578	MtrunA17_Chr1g0150801	50.000	58	28	1	203	259	102	159	2.19e-11	62.4
MsaG029578	MtrunA17_Chr7g0270831	46.429	112	51	3	331	441	184	287	1.95e-25	108
MsaG029578	MtrunA17_Chr8g0386241	53.571	84	39	0	348	431	84	167	2.48e-25	103
MsaG029578	MtrunA17_Chr8g0386241	56.897	58	24	1	203	259	103	160	7.28e-16	75.9
MsaG029578	MtrunA17_Chr7g0224801	63.235	68	25	0	358	425	84	151	4.75e-25	102
MsaG029578	MtrunA17_Chr7g0224801	48.485	66	33	1	203	267	93	158	1.83e-15	74.3
MsaG029578	MtrunA17_Chr8g0383251	47.191	89	47	0	354	442	95	183	1.33e-24	100
MsaG029578	MtrunA17_Chr2g0288871	55.128	78	34	1	350	426	288	365	7.70e-24	105
MsaG029578	MtrunA17_Chr2g0288871	34.091	132	64	4	133	261	254	365	3.26e-13	72.4
MsaG029578	MtrunA17_Chr4g0075201	55.000	80	35	1	350	428	250	329	1.12e-23	104
MsaG029578	MtrunA17_Chr4g0075201	50.820	61	28	2	203	261	267	327	7.66e-12	67.8
MsaG029578	MtrunA17_Chr2g0322391	55.000	80	35	1	350	428	332	411	1.33e-23	104
MsaG029578	MtrunA17_Chr3g0099641	52.564	78	36	1	350	426	234	311	1.61e-23	103
MsaG029578	MtrunA17_Chr3g0129321	53.333	75	35	0	353	427	104	178	6.12e-23	97.1
MsaG029578	MtrunA17_Chr3g0129321	50.000	60	29	1	203	261	118	177	4.91e-12	65.5
MsaG029578	MtrunA17_Chr4g0060271	43.333	120	66	2	309	426	196	315	8.02e-23	102
MsaG029578	MtrunA17_Chr4g0060271	50.820	61	28	2	203	261	255	315	3.44e-11	65.9
MsaG029578	MtrunA17_Chr4g0025061	48.889	90	45	1	340	428	333	422	9.29e-23	102
MsaG029578	MtrunA17_Chr5g0401821	48.958	96	37	2	331	425	174	258	9.67e-23	98.2
MsaG029578	MtrunA17_Chr4g0051181	55.000	80	35	1	349	427	225	304	9.99e-23	101
MsaG029578	MtrunA17_Chr4g0051181	52.459	61	27	2	203	261	243	303	6.73e-12	67.8
MsaG029578	MtrunA17_Chr4g0068541	40.580	138	76	3	351	487	192	324	1.04e-22	100
MsaG029578	MtrunA17_Chr4g0068541	61.667	60	22	1	203	261	208	267	3.18e-15	77.8
MsaG029578	MtrunA17_Chr1g0189391	38.686	137	80	2	291	423	18	154	1.20e-22	99.4
MsaG029578	MtrunA17_Chr7g0248721	57.692	78	32	1	346	423	120	196	2.71e-22	95.5
MsaG029578	MtrunA17_Chr7g0248721	56.897	58	23	2	203	259	141	197	6.83e-14	71.2
MsaG029578	MtrunA17_Chr4g0053281	45.545	101	43	2	332	431	242	331	2.85e-22	98.2
MsaG029578	MtrunA17_Chr6g0485431	34.667	150	94	2	281	426	65	214	7.86e-22	97.4
MsaG029578	MtrunA17_Chr1g0147881	52.381	84	36	2	346	428	244	324	1.87e-21	95.9
MsaG029578	MtrunA17_Chr7g0216891	44.231	104	56	2	330	431	181	284	2.72e-21	97.8
MsaG029578	MtrunA17_Chr7g0216891	52.542	59	26	2	203	259	219	277	3.18e-11	65.9
MsaG029578	MtrunA17_Chr5g0432071	42.593	108	52	2	174	271	65	172	3.88e-21	92.0
MsaG029578	MtrunA17_Chr5g0432071	51.613	62	29	1	367	428	104	164	1.46e-14	72.8
MsaG029578	MtrunA17_Chr2g0302391	50.633	79	38	1	351	428	195	273	8.03e-21	95.1
MsaG029578	MtrunA17_Chr3g0136961	61.017	59	22	1	366	423	137	195	1.93e-20	92.0
MsaG029578	MtrunA17_Chr4g0025051	53.333	75	34	1	354	427	322	396	2.09e-20	95.1
MsaG029578	MtrunA17_Chr7g0238921	63.158	57	21	0	367	423	124	180	2.49e-20	92.0
MsaG029578	MtrunA17_Chr7g0238921	57.895	57	23	1	203	258	124	180	3.26e-13	70.9
MsaG029578	MtrunA17_Chr2g0333851	57.812	64	26	1	365	427	167	230	9.94e-20	90.1
MsaG029578	MtrunA17_Chr2g0333851	46.269	67	31	3	204	265	170	236	2.00e-11	65.5
MsaG029578	MtrunA17_Chr1g0150281	57.895	57	23	1	368	423	141	197	3.10e-19	88.2
MsaG029578	MtrunA17_Chr4g0071521	52.703	74	34	1	351	423	229	302	4.76e-19	88.2
MsaG029578	MtrunA17_Chr4g0001361	57.143	63	26	1	365	426	160	222	1.59e-18	86.7
MsaG029578	MtrunA17_Chr4g0001361	50.000	60	28	2	204	261	163	222	5.44e-12	67.0
MsaG029578	MtrunA17_Chr1g0184691	59.016	61	24	1	364	423	290	350	2.02e-18	87.0
MsaG029578	MtrunA17_Chr1g0150271	41.414	99	47	4	331	426	71	161	6.49e-18	83.6
MsaG029578	MtrunA17_Chr8g0379461	48.485	66	33	1	368	432	77	142	3.08e-17	81.6
MsaG029578	MtrunA17_Chr7g0228941	52.459	61	28	1	364	423	49	109	5.68e-17	77.4
MsaG029578	MtrunA17_Chr3g0139021	48.000	75	38	1	351	424	298	372	1.34e-16	82.0
MsaG029578	MtrunA17_Chr7g0270051	50.000	70	34	1	368	436	54	123	1.80e-16	79.7
MsaG029578	MtrunA17_Chr7g0270051	51.667	60	27	2	204	261	54	113	4.36e-12	66.6
MsaG029578	MtrunA17_Chr2g0289181	47.297	74	38	1	356	428	3	76	2.51e-16	78.6
MsaG029578	MtrunA17_Chr2g0284321	45.679	81	39	2	354	429	18	98	2.77e-16	78.2
MsaG029578	MtrunA17_Chr2g0284321	32.168	143	88	4	204	343	36	172	3.36e-13	68.9
MsaG029578	MtrunA17_Chr2g0319961	50.000	64	31	1	368	430	81	144	3.40e-16	79.0
MsaG029578	MtrunA17_Chr8g0387501	49.254	67	33	1	366	431	128	194	5.21e-16	78.6
MsaG029578	MtrunA17_Chr8g0387501	45.714	70	35	3	204	271	130	198	2.46e-11	64.7
MsaG029578	MtrunA17_Chr1g0188961	64.000	50	18	0	387	436	3	52	1.09e-15	71.6
MsaG029578	MtrunA17_Chr4g0024391	42.500	80	45	1	350	428	212	291	1.81e-15	79.0
MsaG029578	MtrunA17_Chr8g0348311	50.769	65	31	1	368	431	156	220	3.25e-15	77.0
MsaG029578	MtrunA17_Chr7g0248691	39.048	105	47	3	328	431	131	219	3.57e-15	77.0
MsaG029578	MtrunA17_Chr2g0293481	39.583	96	46	3	368	454	268	360	5.58e-15	77.4
MsaG029578	MtrunA17_Chr6g0468181	51.351	74	35	1	213	285	12	85	9.96e-15	70.9
MsaG029578	MtrunA17_Chr1g0202461	46.479	71	34	2	368	437	262	329	9.52e-14	73.2
MsaG029578	MtrunA17_Chr4g0009881	50.847	59	28	1	204	262	18	75	1.79e-13	67.0
MsaG029578	MtrunA17_Chr3g0126391	50.847	59	26	1	366	421	132	190	8.31e-13	69.7
MsaG029578	MtrunA17_Chr3g0126391	48.529	68	29	3	193	256	125	190	2.32e-11	65.5
MsaG029578	MtrunA17_Chr5g0419241	54.348	46	21	0	350	395	60	105	1.58e-12	64.3
MsaG029578	MtrunA17_Chr8g0387981	50.000	58	26	1	367	421	132	189	6.39e-12	67.4
MsaG029578	MtrunA17_Chr8g0387981	52.632	57	23	2	204	256	133	189	8.17e-11	63.9
MsaG029578	MtrunA17_Chr8g0347251	47.143	70	31	3	191	256	126	193	1.56e-11	65.9
MsaG029578	MtrunA17_Chr7g0275531	47.458	59	28	1	366	421	117	175	1.58e-11	65.9
MsaG029578	MtrunA17_Chr7g0275531	43.038	79	39	3	194	266	109	187	3.21e-11	64.7
MsaG029578	MtrunA17_Chr1g0188971	62.162	37	14	0	351	387	46	82	7.95e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029578	AT4G26640.2	54.927	548	195	15	27	548	36	557	2.15e-179	517
MsaG029578	AT4G26640.7	54.512	543	195	15	32	548	1	517	1.34e-175	506
MsaG029578	AT4G26640.1	52.964	506	186	15	69	548	6	485	5.21e-155	452
MsaG029578	AT4G26640.5	60.647	371	99	12	202	548	34	381	1.24e-141	414
MsaG029578	AT4G26640.6	60.647	371	99	12	202	548	34	381	1.24e-141	414
MsaG029578	AT4G26640.4	60.647	371	99	12	202	548	34	381	1.24e-141	414
MsaG029578	AT4G26640.3	60.647	371	99	12	202	548	34	381	1.24e-141	414
MsaG029578	AT5G56270.1	42.634	448	192	9	41	429	108	549	3.13e-92	297
MsaG029578	AT2G03340.1	41.289	419	191	13	28	435	109	483	1.80e-84	271
MsaG029578	AT1G13960.1	40.000	440	179	16	15	426	86	468	2.97e-78	255
MsaG029578	AT2G38470.1	52.852	263	104	5	189	433	168	428	7.59e-78	254
MsaG029578	AT1G13960.2	53.279	244	92	5	202	426	75	315	4.14e-76	245
MsaG029578	AT4G26440.1	40.046	437	165	11	39	443	77	448	1.68e-75	249
MsaG029578	AT4G26440.1	38.136	118	61	3	367	473	178	294	1.59e-13	73.6
MsaG029578	AT4G26440.1	50.000	78	36	1	203	277	372	449	1.95e-12	70.1
MsaG029578	AT5G07100.1	39.461	408	128	11	23	429	7	296	1.38e-72	234
MsaG029578	AT5G07100.1	39.167	120	57	3	335	441	77	193	1.68e-17	84.0
MsaG029578	AT2G30250.1	52.814	231	103	3	200	428	163	389	1.67e-70	231
MsaG029578	AT5G07100.2	51.082	231	64	4	200	429	21	203	2.73e-70	225
MsaG029578	AT5G07100.2	46.512	86	44	1	358	441	15	100	6.63e-16	77.4
MsaG029578	AT5G07100.2	46.250	80	42	1	185	263	123	202	1.52e-12	67.4
MsaG029578	AT5G07100.4	51.082	231	64	4	200	429	21	203	2.73e-70	225
MsaG029578	AT5G07100.4	46.512	86	44	1	358	441	15	100	6.63e-16	77.4
MsaG029578	AT5G07100.4	46.250	80	42	1	185	263	123	202	1.52e-12	67.4
MsaG029578	AT5G07100.5	51.082	231	64	4	200	429	21	203	2.73e-70	225
MsaG029578	AT5G07100.5	46.512	86	44	1	358	441	15	100	6.63e-16	77.4
MsaG029578	AT5G07100.5	46.250	80	42	1	185	263	123	202	1.52e-12	67.4
MsaG029578	AT5G07100.3	51.082	231	64	4	200	429	21	203	2.73e-70	225
MsaG029578	AT5G07100.3	46.512	86	44	1	358	441	15	100	6.63e-16	77.4
MsaG029578	AT5G07100.3	46.250	80	42	1	185	263	123	202	1.52e-12	67.4
MsaG029578	AT3G01080.2	55.556	225	75	4	202	426	204	403	7.86e-70	232
MsaG029578	AT3G01080.1	55.556	225	75	4	202	426	166	365	9.50e-70	230
MsaG029578	AT2G04880.2	48.387	248	100	4	204	433	112	349	1.82e-67	226
MsaG029578	AT2G04880.1	44.610	269	103	4	204	433	112	373	8.71e-65	219
MsaG029578	AT2G37260.3	45.420	262	101	6	195	425	77	327	5.36e-58	197
MsaG029578	AT2G37260.3	55.738	61	26	1	368	428	86	145	8.59e-15	76.3
MsaG029578	AT2G37260.2	45.420	262	101	6	195	425	75	325	5.76e-58	197
MsaG029578	AT2G37260.2	55.738	61	26	1	368	428	84	143	9.25e-15	76.3
MsaG029578	AT2G37260.1	45.420	262	101	6	195	425	157	407	2.39e-57	198
MsaG029578	AT2G37260.1	55.738	61	26	1	368	428	166	225	1.12e-14	76.6
MsaG029578	AT4G30935.1	39.464	261	130	7	202	446	167	415	1.63e-47	172
MsaG029578	AT4G12020.6	45.000	200	101	4	197	387	462	661	1.67e-40	158
MsaG029578	AT4G12020.6	38.679	106	50	4	366	457	467	571	1.10e-12	71.6
MsaG029578	AT4G12020.8	45.000	200	101	4	197	387	462	661	1.67e-40	158
MsaG029578	AT4G12020.8	38.679	106	50	4	366	457	467	571	1.10e-12	71.6
MsaG029578	AT4G12020.7	45.000	200	101	4	197	387	462	661	2.05e-40	157
MsaG029578	AT4G12020.7	38.679	106	50	4	366	457	467	571	1.17e-12	71.6
MsaG029578	AT4G12020.1	45.000	200	101	4	197	387	462	661	2.15e-40	157
MsaG029578	AT4G12020.1	38.679	106	50	4	366	457	467	571	1.14e-12	71.6
MsaG029578	AT4G12020.9	45.000	200	101	4	197	387	462	661	2.15e-40	157
MsaG029578	AT4G12020.9	38.679	106	50	4	366	457	467	571	1.14e-12	71.6
MsaG029578	AT4G12020.3	45.000	200	101	4	197	387	462	661	2.18e-40	157
MsaG029578	AT4G12020.3	38.679	106	50	4	366	457	467	571	1.15e-12	71.6
MsaG029578	AT4G12020.10	45.000	200	101	4	197	387	462	661	2.22e-40	157
MsaG029578	AT4G12020.10	38.679	106	50	4	366	457	467	571	1.11e-12	71.6
MsaG029578	AT4G12020.2	45.000	200	101	4	197	387	462	661	2.27e-40	157
MsaG029578	AT4G12020.2	38.679	106	50	4	366	457	467	571	1.13e-12	71.6
MsaG029578	AT4G12020.4	45.000	200	101	4	197	387	462	661	2.29e-40	157
MsaG029578	AT4G12020.4	38.679	106	50	4	366	457	467	571	1.13e-12	71.6
MsaG029578	AT4G12020.11	45.000	200	101	4	197	387	462	661	2.40e-40	157
MsaG029578	AT4G12020.11	38.679	106	50	4	366	457	467	571	1.62e-12	71.2
MsaG029578	AT4G12020.5	45.000	200	101	4	197	387	395	594	2.98e-40	157
MsaG029578	AT4G12020.5	38.679	106	50	4	366	457	400	504	1.35e-12	71.6
MsaG029578	AT2G44745.1	57.143	91	38	1	344	434	122	211	8.84e-31	119
MsaG029578	AT2G44745.1	51.389	72	34	1	188	258	130	201	7.42e-15	74.3
MsaG029578	AT4G18170.1	41.379	174	69	3	326	472	122	289	1.10e-29	119
MsaG029578	AT4G18170.1	57.627	59	24	1	204	261	173	231	2.33e-14	74.7
MsaG029578	AT4G39410.1	63.158	76	28	0	348	423	204	279	3.19e-29	117
MsaG029578	AT4G39410.1	41.111	90	49	2	188	276	208	294	7.13e-12	67.0
MsaG029578	AT1G29860.1	62.821	78	29	0	351	428	120	197	3.72e-28	114
MsaG029578	AT1G29860.1	59.322	59	23	1	204	261	137	195	2.12e-14	74.3
MsaG029578	AT1G69310.4	64.474	76	27	0	348	423	128	203	1.41e-27	112
MsaG029578	AT1G69310.4	60.714	56	21	1	204	258	148	203	7.00e-14	72.8
MsaG029578	AT1G69310.2	64.474	76	27	0	348	423	128	203	1.41e-27	112
MsaG029578	AT1G69310.2	60.714	56	21	1	204	258	148	203	7.00e-14	72.8
MsaG029578	AT1G69310.1	64.474	76	27	0	348	423	128	203	1.41e-27	112
MsaG029578	AT1G69310.1	60.714	56	21	1	204	258	148	203	7.00e-14	72.8
MsaG029578	AT5G26170.1	62.857	70	26	0	354	423	100	169	2.07e-27	108
MsaG029578	AT5G26170.1	49.123	57	28	1	203	258	113	169	3.79e-11	62.4
MsaG029578	AT3G01080.3	68.000	75	22	1	202	276	204	276	4.63e-27	112
MsaG029578	AT3G01080.3	55.556	63	27	1	367	429	205	266	3.33e-16	80.5
MsaG029578	AT2G47260.1	63.158	76	28	0	351	426	158	233	8.09e-27	111
MsaG029578	AT2G47260.1	50.000	78	38	1	204	280	175	252	1.92e-14	75.1
MsaG029578	AT5G46350.1	58.750	80	33	0	353	432	169	248	1.34e-26	110
MsaG029578	AT5G46350.1	53.731	67	28	2	204	269	184	248	5.06e-14	73.9
MsaG029578	AT5G49520.1	61.842	76	29	0	351	426	205	280	1.95e-26	112
MsaG029578	AT5G49520.1	58.333	60	24	1	203	261	221	280	3.18e-14	75.1
MsaG029578	AT5G13080.1	61.111	72	28	0	354	425	54	125	4.75e-26	104
MsaG029578	AT5G13080.1	53.448	58	26	1	203	259	67	124	8.90e-15	72.0
MsaG029578	AT3G01970.1	53.933	89	41	0	354	442	52	140	5.71e-26	103
MsaG029578	AT3G01970.1	50.000	66	32	1	203	267	65	130	2.27e-14	70.9
MsaG029578	AT1G55600.1	62.667	75	28	0	354	428	294	368	7.38e-26	111
MsaG029578	AT1G55600.1	56.667	60	25	1	203	261	307	366	1.63e-14	76.6
MsaG029578	AT5G41570.1	60.563	71	28	0	353	423	84	154	4.90e-25	102
MsaG029578	AT5G41570.1	51.724	58	27	1	203	259	98	155	3.34e-13	68.6
MsaG029578	AT4G04450.2	57.500	80	33	1	350	428	181	260	1.08e-24	107
MsaG029578	AT1G64000.1	60.000	70	28	0	354	423	101	170	1.43e-24	101
MsaG029578	AT1G64000.1	51.724	58	27	1	203	259	114	171	9.79e-14	70.5
MsaG029578	AT5G64810.1	56.338	71	31	0	354	424	97	167	3.17e-24	100
MsaG029578	AT4G04450.1	57.500	80	33	1	350	428	275	354	4.80e-24	106
MsaG029578	AT2G46130.1	56.579	76	33	0	348	423	11	86	6.56e-24	97.1
MsaG029578	AT2G46130.1	46.154	78	41	1	183	259	10	87	6.34e-16	74.3
MsaG029578	AT1G62300.1	56.410	78	33	1	350	426	295	372	1.85e-23	104
MsaG029578	AT1G62300.1	37.000	100	57	3	168	261	273	372	2.74e-11	66.6
MsaG029578	AT4G22070.4	56.410	78	33	1	350	426	280	357	2.47e-23	104
MsaG029578	AT4G22070.3	56.410	78	33	1	350	426	280	357	2.47e-23	104
MsaG029578	AT4G22070.2	56.410	78	33	1	350	426	280	357	2.47e-23	104
MsaG029578	AT4G22070.1	56.410	78	33	1	350	426	280	357	2.47e-23	104
MsaG029578	AT1G69310.3	60.526	76	26	1	348	423	128	199	7.56e-23	99.0
MsaG029578	AT3G62340.1	59.459	74	30	0	353	426	104	177	1.78e-22	97.8
MsaG029578	AT3G62340.1	56.667	60	25	1	203	261	118	177	9.12e-14	72.4
MsaG029578	AT1G68150.1	55.128	78	34	1	351	427	219	296	2.76e-22	99.4
MsaG029578	AT1G68150.1	52.459	61	27	2	203	261	235	295	4.72e-12	68.2
MsaG029578	AT4G01720.1	54.430	79	35	1	349	426	221	299	3.90e-22	100
MsaG029578	AT5G15130.2	48.193	83	42	1	350	431	168	250	5.70e-22	99.8
MsaG029578	AT5G15130.2	50.820	61	28	2	203	261	185	245	6.15e-11	65.5
MsaG029578	AT5G15130.1	48.193	83	42	1	350	431	210	292	7.06e-22	99.8
MsaG029578	AT5G15130.1	50.820	61	28	2	203	261	227	287	7.22e-11	65.1
MsaG029578	AT1G18860.1	52.564	78	36	1	350	426	222	299	1.43e-21	98.6
MsaG029578	AT1G18860.1	52.459	61	27	2	203	261	239	299	7.70e-11	65.1
MsaG029578	AT2G21900.1	43.878	98	50	2	336	428	73	170	7.85e-21	91.3
MsaG029578	AT2G21900.1	50.000	60	29	1	203	261	109	168	3.82e-13	68.9
MsaG029578	AT2G23320.1	51.250	80	38	1	347	425	220	299	2.75e-20	92.4
MsaG029578	AT4G31550.1	56.000	75	32	1	351	424	230	304	2.94e-20	92.4
MsaG029578	AT4G31550.2	56.000	75	32	1	351	424	229	303	3.07e-20	92.4
MsaG029578	AT4G31800.2	37.097	124	61	3	366	485	110	220	7.57e-20	89.4
MsaG029578	AT4G31800.1	37.097	124	61	3	366	485	175	285	1.59e-19	90.1
MsaG029578	AT4G24240.1	51.852	81	35	2	346	425	263	340	1.87e-19	90.5
MsaG029578	AT2G46130.2	52.632	76	32	1	348	423	11	82	2.68e-19	83.6
MsaG029578	AT2G46130.2	42.308	78	40	2	183	259	10	83	2.50e-11	61.2
MsaG029578	AT1G80840.1	41.346	104	50	2	346	438	115	218	3.11e-19	89.0
MsaG029578	AT1G80840.1	24.545	220	125	5	57	261	13	206	1.09e-11	66.6
MsaG029578	AT5G28650.1	41.346	104	49	2	331	433	237	329	3.22e-19	89.4
MsaG029578	AT5G43290.1	41.228	114	47	3	330	423	57	170	4.24e-19	88.2
MsaG029578	AT5G43290.1	45.045	111	50	5	157	258	62	170	2.07e-14	74.3
MsaG029578	AT2G30590.1	54.054	74	33	1	351	423	297	370	7.08e-19	89.0
MsaG029578	AT3G04670.1	41.346	104	49	2	331	433	237	329	7.38e-19	88.2
MsaG029578	AT4G23550.1	46.753	77	40	1	356	431	129	205	7.40e-19	88.2
MsaG029578	AT2G24570.1	55.405	74	32	1	351	423	227	300	9.27e-19	87.8
MsaG029578	AT2G25000.2	51.562	64	30	1	366	428	102	165	1.44e-18	85.5
MsaG029578	AT2G25000.4	51.562	64	30	1	366	428	102	165	1.44e-18	85.5
MsaG029578	AT2G25000.3	50.746	67	32	1	366	431	124	190	3.56e-18	84.7
MsaG029578	AT2G25000.1	51.562	64	30	1	366	428	145	208	4.83e-18	84.7
MsaG029578	AT1G69810.2	44.444	90	46	3	350	437	128	215	3.10e-17	83.6
MsaG029578	AT1G69810.2	41.892	74	40	2	201	271	143	216	1.24e-11	66.6
MsaG029578	AT1G69810.1	44.444	90	46	3	350	437	186	273	4.48e-17	84.0
MsaG029578	AT1G69810.1	41.892	74	40	2	201	271	201	274	1.44e-11	67.0
MsaG029578	AT1G29280.1	49.231	65	32	1	368	431	75	139	1.89e-16	80.1
MsaG029578	AT1G29280.1	30.909	165	107	5	191	352	66	226	5.90e-12	66.6
MsaG029578	AT4G01250.1	53.846	65	29	1	368	431	129	193	2.14e-16	80.5
MsaG029578	AT3G58710.1	49.275	69	32	2	368	433	72	140	2.99e-15	76.6
MsaG029578	AT3G58710.2	49.275	69	32	2	368	433	71	139	3.04e-15	76.6
MsaG029578	AT5G52830.1	42.683	82	45	2	351	431	150	230	3.88e-15	77.4
MsaG029578	AT5G52830.1	48.387	62	30	2	202	261	164	225	7.73e-11	64.3
MsaG029578	AT2G34830.1	47.692	65	33	1	368	431	216	280	7.31e-15	77.4
MsaG029578	AT2G34830.1	32.258	155	92	5	204	349	216	366	3.21e-11	65.9
MsaG029578	AT2G34830.2	47.692	65	33	1	368	431	225	289	7.63e-15	77.4
MsaG029578	AT2G34830.2	32.258	155	92	5	204	349	225	375	3.87e-11	65.9
MsaG029578	AT1G30650.1	47.692	65	33	1	368	431	218	282	1.19e-14	76.6
MsaG029578	AT5G45050.4	47.692	65	33	1	368	431	1042	1106	1.21e-13	74.7
MsaG029578	AT5G45050.1	47.692	65	33	1	368	431	1181	1245	1.28e-13	74.7
MsaG029578	AT5G45050.2	47.692	65	33	1	368	431	1153	1217	1.30e-13	74.7
MsaG029578	AT4G23810.1	50.794	63	25	3	198	256	155	215	1.12e-12	69.7
MsaG029578	AT2G46400.1	35.922	103	53	2	322	421	69	161	2.66e-12	68.2
MsaG029578	AT2G40740.1	47.059	68	29	3	193	256	166	230	1.59e-11	65.9
MsaG029578	AT2G40740.1	43.056	72	35	2	367	432	173	244	1.84e-11	65.5
MsaG029578	AT4G11070.2	36.134	119	63	5	142	256	57	166	1.87e-11	65.5
MsaG029578	AT2G40740.3	43.056	72	35	2	367	432	182	253	2.20e-11	65.5
MsaG029578	AT2G40740.3	47.059	68	29	3	193	256	175	239	2.22e-11	65.5
MsaG029578	AT3G56400.1	34.615	104	55	3	362	452	115	218	2.76e-11	65.1
MsaG029578	AT4G11070.1	36.134	119	63	5	142	256	89	198	2.87e-11	65.5
MsaG029578	AT5G24110.1	48.276	58	26	2	203	256	113	170	4.20e-11	64.7
MsaG029578	AT1G66560.1	48.276	58	27	1	367	421	103	160	4.46e-11	63.9

Find 160 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGACAGACAAGAATAAAAT+TGG	0.229290	5:+79047992	MsaT029578.1:CDS
CGGTTGCTTGGTTGAGGTTT+AGG	0.244830	5:-79046878	None:intergenic
GGATACCGCTGGCGTAAATA+TGG	0.253314	5:+79047387	MsaT029578.1:CDS
AAATGCTGCTATCCGAATTT+AGG	0.269734	5:+79048093	MsaT029578.1:CDS
TTCAATACCAGCACTGTTAA+TGG	0.270744	5:+79046284	MsaT029578.1:CDS
GGATACAATTGGCGAAAGTA+TGG	0.277636	5:+79046716	MsaT029578.1:CDS
CGATAACAGGGCATCTTCTT+TGG	0.279235	5:+79046943	MsaT029578.1:CDS
AACTGATTGCTCTGGACTAT+TGG	0.284827	5:-79047086	None:intergenic
TCAAGCTTTAAACTGTTCTA+TGG	0.285827	5:+79046220	MsaT029578.1:CDS
AATCACTGAGATAATATATA+AGG	0.289665	5:+79046841	MsaT029578.1:CDS
CACAAAGGCAACACTGCTAA+TGG	0.304713	5:+79046674	MsaT029578.1:CDS
TTGATTGCTATTCCTAAATT+CGG	0.328818	5:-79048105	None:intergenic
CATTAGCAGTGTTGCCTTTG+TGG	0.336033	5:-79046673	None:intergenic
CTTTCCACGTGTTTCCTAAC+GGG	0.337493	5:-79047858	None:intergenic
TATGAGCGAAGTTGATATAT+TGG	0.356592	5:+79047359	MsaT029578.1:CDS
AAGGAGAGAGATCCGATAAC+AGG	0.368713	5:+79046930	MsaT029578.1:CDS
CCCATTGATCCGAATCGAAC+TGG	0.370192	5:+79044409	MsaT029578.1:CDS
GCAGTGTTGCCTTTGTGGTT+AGG	0.370912	5:-79046668	None:intergenic
ATTATGAACAAACTTGAAAC+TGG	0.377335	5:-79048144	None:intergenic
CCCAGTTCGATTCGGATCAA+TGG	0.381738	5:-79044410	None:intergenic
CAAAGAAGATGCCCTGTTAT+CGG	0.382806	5:-79046942	None:intergenic
TTGAAGCATGCAGAAGTTAC+AGG	0.389514	5:-79046266	None:intergenic
TTTGAACAGGTGATGATGAT+AGG	0.389808	5:-79046598	None:intergenic
AACCATGGGAAGAATACTAA+TGG	0.391787	5:+79048283	MsaT029578.1:CDS
TAAACCACAAGATAGAAATA+TGG	0.401369	5:+79046331	MsaT029578.1:CDS
AACTGTTCTATGGCTTCTGC+TGG	0.409079	5:+79046230	MsaT029578.1:CDS
TATGTTGTAATTACAGCTTT+CGG	0.411726	5:-79047894	None:intergenic
GTGTTTCCTAACGGGGCAAC+CGG	0.414596	5:-79047850	None:intergenic
TCTACTCAAGTGGAAGGTTC+AGG	0.415708	5:+79046506	MsaT029578.1:CDS
GATCCGAATCGAACTGGGTC+GGG	0.420694	5:+79044415	MsaT029578.1:CDS
ACCATGGGAAGAATACTAAT+GGG	0.424995	5:+79048284	MsaT029578.1:CDS
AACAGTTTAAAGCTTGAAGA+AGG	0.428892	5:-79046214	None:intergenic
TATCCATCATTTGATGATTG+AGG	0.434013	5:-79046698	None:intergenic
GCAAGGATATACCTTGGGTT+AGG	0.435936	5:-79047432	None:intergenic
ATCTTCTCCATTAAATGAAA+AGG	0.439104	5:+79046547	MsaT029578.1:CDS
CGCTCCCGTCGATGTCAATT+CGG	0.440733	5:+79046640	MsaT029578.1:CDS
CTTCCCATGGTTTGTGAGCA+AGG	0.441194	5:-79048272	None:intergenic
CCCCATTAGTATTCTTCCCA+TGG	0.444938	5:-79048285	None:intergenic
GAGTATCGGTTGCTTGGTTG+AGG	0.444969	5:-79046884	None:intergenic
ATCATCATCACCTGTTCAAA+TGG	0.445905	5:+79046601	MsaT029578.1:CDS
ACAAAGGCAACACTGCTAAT+GGG	0.447362	5:+79046675	MsaT029578.1:CDS
TTCATGTTTGAAAGAAGAAC+CGG	0.449237	5:-79044550	None:intergenic
CTCGAGATCGGAAGCTTCGC+CGG	0.450239	5:-79044472	None:intergenic
TGACCCGACCCAGTTCGATT+CGG	0.453678	5:-79044418	None:intergenic
ATCACTGAGATAATATATAA+GGG	0.454298	5:+79046842	MsaT029578.1:CDS
CAAATGCCGGTTGCCCCGTT+AGG	0.456890	5:+79047844	MsaT029578.1:CDS
TATCCGAGAGCCACGGGTTG+TGG	0.458528	5:+79047329	MsaT029578.1:CDS
GGGTGTCCCTTCGCCGGAGT+TGG	0.461210	5:-79044389	None:intergenic
CATCAAATGATGGATACAAT+TGG	0.461233	5:+79046705	MsaT029578.1:CDS
GTTGCCACAACTGATTGCTC+TGG	0.469396	5:-79047094	None:intergenic
TGTCCCTTCGCCGGAGTTGG+TGG	0.471029	5:-79044386	None:intergenic
GTATAGTCCGACGTCGTTGT+TGG	0.471201	5:+79044522	MsaT029578.1:CDS
CCAGTTCGATTCGGATCAAT+GGG	0.472051	5:-79044409	None:intergenic
GACACAAATCCAGCACCCTC+TGG	0.473380	5:-79047130	None:intergenic
AACAGGGCATCTTCTTTGGC+TGG	0.474402	5:+79046947	MsaT029578.1:CDS
TCTTCTTTGGCTGGCCGAGA+TGG	0.475333	5:+79046956	MsaT029578.1:CDS
CCAGCAGAGTATCGGTTGCT+TGG	0.481275	5:-79046890	None:intergenic
ACCACCACCAACTCCGGCGA+AGG	0.482330	5:+79044382	MsaT029578.1:CDS
GGTTCTTCTTTCAAACATGA+AGG	0.483334	5:+79044552	MsaT029578.1:CDS
AATAACGGTTCAAATCCGTT+TGG	0.484421	5:+79048200	MsaT029578.1:CDS
ATACTATTAGTCTTGACCTT+GGG	0.486591	5:+79048024	MsaT029578.1:CDS
ATGGGAATCAGCTCCACGGC+TGG	0.488519	5:+79048047	MsaT029578.1:CDS
GACGTCGTTGTTGGAGTCTC+CGG	0.489196	5:+79044531	MsaT029578.1:CDS
CCCTTCGCCGGAGTTGGTGG+TGG	0.489782	5:-79044383	None:intergenic
CTGGAACTAACCATTTGAAC+AGG	0.490509	5:-79046611	None:intergenic
ATCATACCTTTGCTTTGAGA+AGG	0.491502	5:-79047188	None:intergenic
ATCAAACCCATCGTTTGTCC+TGG	0.491762	5:-79047155	None:intergenic
ATCAATGGGTGTCCCTTCGC+CGG	0.493461	5:-79044395	None:intergenic
GTTGAGCCTTCACCGACTAC+AGG	0.494072	5:+79046188	MsaT029578.1:CDS
TCTAGAGAAAATAGAAATGA+TGG	0.497207	5:+79048224	MsaT029578.1:CDS
TCTTTCCACGTGTTTCCTAA+CGG	0.500924	5:-79047859	None:intergenic
GCTGTAATTACAACATATGA+AGG	0.501085	5:+79047900	MsaT029578.1:CDS
ATTACCATATTTCTATCTTG+TGG	0.504868	5:-79046335	None:intergenic
TATTACAAATGTACAAATGC+CGG	0.506175	5:+79047831	MsaT029578.1:CDS
AATGGAGAAGATCGAAATGA+TGG	0.509457	5:-79046536	None:intergenic
GATCTTAGTCCAGAGGGTGC+TGG	0.510709	5:+79047121	MsaT029578.1:CDS
GATACCGCTGGCGTAAATAT+GGG	0.511485	5:+79047388	MsaT029578.1:CDS
ATCGACGGGAGCGCTAGTGC+TGG	0.511862	5:-79046630	None:intergenic
TTTAGAACACCGTAGTATAC+CGG	0.512392	5:-79048179	None:intergenic
GATACTATTAGTCTTGACCT+TGG	0.514318	5:+79048023	MsaT029578.1:CDS
GAAGCAACCACCACCAACTC+CGG	0.517386	5:+79044376	MsaT029578.1:CDS
CAACGACGTCGGACTATACC+CGG	0.520778	5:-79044518	None:intergenic
ACATGGTTGTTGAAGTCTGC+AGG	0.527078	5:-79046473	None:intergenic
ATTAGTCTTGACCTTGGGAT+GGG	0.529726	5:+79048029	MsaT029578.1:CDS
CAAGTGGAAGGTTCAGGAAA+CGG	0.532286	5:+79046512	MsaT029578.1:CDS
TATTAGTCTTGACCTTGGGA+TGG	0.534330	5:+79048028	MsaT029578.1:CDS
GTACCACAACCCGTGGCTCT+CGG	0.534490	5:-79047332	None:intergenic
TACTACGGTGTTCTAAATAA+CGG	0.535215	5:+79048185	MsaT029578.1:CDS
AGTAGTAGCCATGACATGGC+AGG	0.536137	5:+79047954	MsaT029578.1:CDS
TCATACCTTTGCTTTGAGAA+GGG	0.537816	5:-79047187	None:intergenic
GGGCCTCAATCATCAAATGA+TGG	0.539104	5:+79046695	MsaT029578.1:CDS
ACGGCTGGAAATAGATCGAA+TGG	0.543020	5:+79048062	MsaT029578.1:CDS
ATTCGATCTATTTCCAGCCG+TGG	0.544228	5:-79048060	None:intergenic
ATGCACGGCGACCTCGAGAT+CGG	0.549767	5:-79044484	None:intergenic
ACAACCCGTGGCTCTCGGAT+AGG	0.549884	5:-79047327	None:intergenic
CCATTGATCCGAATCGAACT+GGG	0.550113	5:+79044410	MsaT029578.1:CDS
CCAAGCAACCGATACTCTGC+TGG	0.551219	5:+79046890	MsaT029578.1:CDS
TAAGCCTATCCGAGAGCCAC+GGG	0.556300	5:+79047323	MsaT029578.1:CDS
AACAAATGATCTTAGTCCAG+AGG	0.561426	5:+79047114	MsaT029578.1:CDS
GAAGTTGATATATTGGATGA+TGG	0.565114	5:+79047366	MsaT029578.1:CDS
TCATAATACTACCTCAGCTC+CGG	0.566675	5:+79048160	MsaT029578.1:CDS
TCATCCGAATTGACATCGAC+GGG	0.567171	5:-79046644	None:intergenic
AGGGACCCTGTAGTCGGTGA+AGG	0.567986	5:-79046194	None:intergenic
GATACAATTGGCGAAAGTAT+GGG	0.568812	5:+79046717	MsaT029578.1:CDS
ACAGTTTAAAGCTTGAAGAA+GGG	0.569142	5:-79046213	None:intergenic
AAGATACAAGCTGATGTCGC+CGG	0.575531	5:+79044453	MsaT029578.1:CDS
GTGCTGGATTTGTGTCGACC+AGG	0.576373	5:+79047137	MsaT029578.1:CDS
CCACCACCAACTCCGGCGAA+GGG	0.580167	5:+79044383	MsaT029578.1:CDS
ACCTCAGCTCCGGTATACTA+CGG	0.581112	5:+79048170	MsaT029578.1:CDS
TGGGTCGGGTCAAAATTCAA+TGG	0.582215	5:+79044429	MsaT029578.1:CDS
GGAAATAGATCGAATGGGCA+AGG	0.582572	5:+79048068	MsaT029578.1:CDS
TCTAGCCGGTATTACCATCT+CGG	0.583473	5:-79046970	None:intergenic
ATATGGGCAGAAGGTTGTGA+GGG	0.586496	5:+79047404	MsaT029578.1:CDS
TGTCGACCAGGACAAACGAT+GGG	0.588080	5:+79047149	MsaT029578.1:CDS
TCTCGGATAGGCTTAACTAC+AGG	0.589498	5:-79047315	None:intergenic
TAACAGAACCAGCAGAGTAT+CGG	0.592680	5:-79046898	None:intergenic
ATGATCCCTTCTCAAAGCAA+AGG	0.594522	5:+79047182	MsaT029578.1:CDS
GTATCCTTGCTCACAAACCA+TGG	0.602949	5:+79048268	MsaT029578.1:CDS
TTGAGCCTTCACCGACTACA+GGG	0.605193	5:+79046189	MsaT029578.1:CDS
CCGTGCATCACAATACCCGC+CGG	0.606013	5:+79044499	MsaT029578.1:CDS
TTTCCACGTGTTTCCTAACG+GGG	0.607409	5:-79047857	None:intergenic
TGGAGCTGATTCCCATCCCA+AGG	0.608733	5:-79048040	None:intergenic
CTGGCGTAAATATGGGCAGA+AGG	0.610110	5:+79047395	MsaT029578.1:CDS
GAAATAGATCGAATGGGCAA+GGG	0.610553	5:+79048069	MsaT029578.1:CDS
TTAAGCCTATCCGAGAGCCA+CGG	0.611015	5:+79047322	MsaT029578.1:CDS
CGTGCATCACAATACCCGCC+GGG	0.611416	5:+79044500	MsaT029578.1:CDS
AATATGGGCAGAAGGTTGTG+AGG	0.611794	5:+79047403	MsaT029578.1:CDS
TTGCATGTCCTGCCATGTCA+TGG	0.612210	5:-79047962	None:intergenic
CGGCTGGAAATAGATCGAAT+GGG	0.612520	5:+79048063	MsaT029578.1:CDS
TTCATCCGAATTGACATCGA+CGG	0.614196	5:-79046645	None:intergenic
TGATCCGAATCGAACTGGGT+CGG	0.615553	5:+79044414	MsaT029578.1:CDS
GTGTCGACCAGGACAAACGA+TGG	0.617293	5:+79047148	MsaT029578.1:CDS
TATTGGATGATGGATACCGC+TGG	0.617305	5:+79047376	MsaT029578.1:CDS
CGGCGAAGCTTCCGATCTCG+AGG	0.618256	5:+79044473	MsaT029578.1:CDS
ACAAATGATCTTAGTCCAGA+GGG	0.621953	5:+79047115	MsaT029578.1:CDS
TGGCTACTACTCCTTGCGGC+AGG	0.622630	5:-79047942	None:intergenic
ATCATGATGTACCTGCCGCA+AGG	0.626676	5:+79047931	MsaT029578.1:CDS
AGGAGAGAGATCCGATAACA+GGG	0.627701	5:+79046931	MsaT029578.1:CDS
TATCCTTGCTCACAAACCAT+GGG	0.628514	5:+79048269	MsaT029578.1:CDS
TAGTCCAGAGCAATCAGTTG+TGG	0.629779	5:+79047090	MsaT029578.1:CDS
TGAAGAAGGGACCCTGTAGT+CGG	0.633505	5:-79046200	None:intergenic
AAGGAGTAGTAGCCATGACA+TGG	0.636348	5:+79047950	MsaT029578.1:CDS
CCGGCGGGTATTGTGATGCA+CGG	0.645844	5:-79044499	None:intergenic
ACCGTAGTATACCGGAGCTG+AGG	0.648503	5:-79048171	None:intergenic
TGAGGGGAAATCCTAACCCA+AGG	0.652567	5:+79047421	MsaT029578.1:CDS
TCTGCCCATATTTACGCCAG+CGG	0.654849	5:-79047392	None:intergenic
GTCATGGCTACTACTCCTTG+CGG	0.655788	5:-79047946	None:intergenic
GACGTCGGACTATACCCGGC+GGG	0.657888	5:-79044514	None:intergenic
GGTTTGTGAGCAAGGATACG+CGG	0.665746	5:-79048264	None:intergenic
TGGGATGGGAATCAGCTCCA+CGG	0.679215	5:+79048043	MsaT029578.1:CDS
GTGAGCAAGGATACGCGGAG+TGG	0.685493	5:-79048259	None:intergenic
TATGGGCAGAAGGTTGTGAG+GGG	0.687237	5:+79047405	MsaT029578.1:CDS
CCATGGGAAGAATACTAATG+GGG	0.691385	5:+79048285	MsaT029578.1:CDS
ATAGTCTGTACCACAACCCG+TGG	0.696081	5:-79047339	None:intergenic
TCGGATGAACCTAACCACAA+AGG	0.702575	5:+79046659	MsaT029578.1:CDS
GGAGACTCCAACAACGACGT+CGG	0.702898	5:-79044529	None:intergenic
GGTTCTGTTATGTCTACACA+AGG	0.712252	5:+79046911	MsaT029578.1:CDS
TTGCCCCGTTAGGAAACACG+TGG	0.715334	5:+79047854	MsaT029578.1:CDS
CGACGTCGGACTATACCCGG+CGG	0.765121	5:-79044515	None:intergenic
GTACATTTGTAATAGCTGCG+CGG	0.802944	5:-79046767	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	79044373	79048313	79044373	ID=MsaG029578
Chr5	mRNA	79044373	79048313	79044373	ID=MsaT029578.1;Parent=MsaG029578
Chr5	exon	79044373	79044573	79044373	ID=MsaT029578.1.exon1;Parent=MsaT029578.1
Chr5	CDS	79044373	79044573	79044373	ID=cds.MsaT029578.1;Parent=MsaT029578.1
Chr5	exon	79046188	79046352	79046188	ID=MsaT029578.1.exon2;Parent=MsaT029578.1
Chr5	CDS	79046188	79046352	79046188	ID=cds.MsaT029578.1;Parent=MsaT029578.1
Chr5	exon	79046470	79046977	79046470	ID=MsaT029578.1.exon3;Parent=MsaT029578.1
Chr5	CDS	79046470	79046977	79046470	ID=cds.MsaT029578.1;Parent=MsaT029578.1
Chr5	exon	79047077	79047203	79047077	ID=MsaT029578.1.exon4;Parent=MsaT029578.1
Chr5	CDS	79047077	79047203	79047077	ID=cds.MsaT029578.1;Parent=MsaT029578.1
Chr5	exon	79047284	79047442	79047284	ID=MsaT029578.1.exon5;Parent=MsaT029578.1
Chr5	CDS	79047284	79047442	79047284	ID=cds.MsaT029578.1;Parent=MsaT029578.1
Chr5	exon	79047827	79048313	79047827	ID=MsaT029578.1.exon6;Parent=MsaT029578.1
Chr5	CDS	79047827	79048313	79047827	ID=cds.MsaT029578.1;Parent=MsaT029578.1

Gene Sequence

>MsaT029578.1

ATGGAAGCAACCACCACCAACTCCGGCGAAGGGACACCCATTGATCCGAATCGAACTGGGTCGGGTCAAAATTCAATGGCAAGATACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACAATACCCGCCGGGTATAGTCCGACGTCGTTGTTGGAGTCTCCGGTTCTTCTTTCAAACATGAAGGTTGAGCCTTCACCGACTACAGGGTCCCTTCTTCAAGCTTTAAACTGTTCTATGGCTTCTGCTGGTTCTGCTACATTTCCTGTAACTTCTGCATGCTTCAATACCAGCACTGTTAATGGCAGAAAATCAAGTTTCTTTGAGTTTAAACCACAAGATAGAAATATGGTTCCTGCAGACTTCAACAACCATGTTAGCGAAAAATCTACTCAAGTGGAAGGTTCAGGAAACGGTCCATCATTTCGATCTTCTCCATTAAATGAAAAGGAGATAGCAGATCAATCTAATGAATTAAGCCTATCATCATCACCTGTTCAAATGGTTAGTTCCAGCACTAGCGCTCCCGTCGATGTCAATTCGGATGAACCTAACCACAAAGGCAACACTGCTAATGGGCCTCAATCATCAAATGATGGATACAATTGGCGAAAGTATGGGCAAAAACATGTTAAAGGGAGTGAGTTTCCGCGCAGCTATTACAAATGTACGCATCCTAATTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATATATAAGGGAACACATGATCATCCTAAACCTCAACCAAGCAACCGATACTCTGCTGGTTCTGTTATGTCTACACAAGGAGAGAGATCCGATAACAGGGCATCTTCTTTGGCTGGCCGAGATGACAAAGCATCCAATAGTCCAGAGCAATCAGTTGTGGCAACAAATGATCTTAGTCCAGAGGGTGCTGGATTTGTGTCGACCAGGACAAACGATGGGTTTGATGAAGATGATCCCTTCTCAAAGCAAAGAAAAATGGAACTCGGAAATGCTGACATCATTCCTGTAGTTAAGCCTATCCGAGAGCCACGGGTTGTGGTACAGACTATGAGCGAAGTTGATATATTGGATGATGGATACCGCTGGCGTAAATATGGGCAGAAGGTTGTGAGGGGAAATCCTAACCCAAGGAGTTATTACAAATGTACAAATGCCGGTTGCCCCGTTAGGAAACACGTGGAAAGAGCATCACATGATCCGAAAGCTGTAATTACAACATATGAAGGCAAACACAATCATGATGTACCTGCCGCAAGGAGTAGTAGCCATGACATGGCAGGACATGCAACTTCATTTCGACAGACAAGAATAAAATTGGAAGAAAATGATACTATTAGTCTTGACCTTGGGATGGGAATCAGCTCCACGGCTGGAAATAGATCGAATGGGCAAGGGAAAATGCTGCTATCCGAATTTAGGAATAGCAATCAAACTCACACAAGCAATTCCAGTTTCAAGTTTGTTCATAATACTACCTCAGCTCCGGTATACTACGGTGTTCTAAATAACGGTTCAAATCCGTTTGGTTCTAGAGAAAATAGAAATGATGGTTCGTCTTTAAACCACTCCGCGTATCCTTGCTCACAAACCATGGGAAGAATACTAATGGGGCCATGA

Protein sequence

>MsaT029578.1

MEATTTNSGEGTPIDPNRTGSGQNSMARYKLMSPAKLPISRSPCITIPAGYSPTSLLESPVLLSNMKVEPSPTTGSLLQALNCSMASAGSATFPVTSACFNTSTVNGRKSSFFEFKPQDRNMVPADFNNHVSEKSTQVEGSGNGPSFRSSPLNEKEIADQSNELSLSSSPVQMVSSSTSAPVDVNSDEPNHKGNTANGPQSSNDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSNRYSAGSVMSTQGERSDNRASSLAGRDDKASNSPEQSVVATNDLSPEGAGFVSTRTNDGFDEDDPFSKQRKMELGNADIIPVVKPIREPRVVVQTMSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGHATSFRQTRIKLEENDTISLDLGMGISSTAGNRSNGQGKMLLSEFRNSNQTHTSNSSFKFVHNTTSAPVYYGVLNNGSNPFGSRENRNDGSSLNHSAYPCSQTMGRILMGP*