AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG029869

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG029869 MtrunA17_Chr1g0211661 76.457 892 138 12 26 872 1 865 0.0 1282
MsaG029869 MtrunA17_Chr1g0211661 83.189 577 70 2 989 1538 289 865 0.0 975
MsaG029869 MtrunA17_Chr1g0211711 68.217 774 210 7 189 932 284 1051 0.0 1073
MsaG029869 MtrunA17_Chr1g0211711 69.525 653 160 6 989 1604 407 1057 0.0 916
MsaG029869 MtrunA17_Chr1g0183311 59.293 877 286 9 123 932 10 882 0.0 992
MsaG029869 MtrunA17_Chr1g0183311 66.176 680 165 6 990 1604 209 888 0.0 910
MsaG029869 MtrunA17_Chr5g0426961 67.089 711 207 4 241 930 129 833 0.0 970
MsaG029869 MtrunA17_Chr5g0426961 66.195 636 180 5 993 1600 209 837 0.0 841
MsaG029869 MtrunA17_Chr1g0211691 52.376 947 297 19 26 820 1 945 0.0 857
MsaG029869 MtrunA17_Chr1g0211691 66.296 540 147 8 989 1493 406 945 0.0 690
MsaG029869 MtrunA17_Chr5g0448301 77.180 539 118 2 309 842 93 631 0.0 833
MsaG029869 MtrunA17_Chr5g0448301 81.212 495 92 1 1014 1507 129 623 0.0 824
MsaG029869 MtrunA17_Chr5g0448301 73.936 188 46 1 85 269 1 188 2.13e-71 252
MsaG029869 MtrunA17_Chr5g0420361 60.310 645 205 8 316 913 139 779 0.0 767
MsaG029869 MtrunA17_Chr5g0420361 59.538 650 205 12 984 1579 134 779 0.0 743
MsaG029869 MtrunA17_Chr6g0472441 55.656 663 208 12 316 925 81 710 0.0 703
MsaG029869 MtrunA17_Chr6g0472441 55.090 668 207 13 984 1591 76 710 0.0 694
MsaG029869 MtrunA17_Chr4g0075261 43.496 738 316 15 252 929 168 864 0.0 571
MsaG029869 MtrunA17_Chr4g0075261 41.791 670 283 13 994 1595 234 864 2.72e-153 490
MsaG029869 MtrunA17_Chr2g0289121 45.014 702 326 11 251 929 155 819 0.0 570
MsaG029869 MtrunA17_Chr2g0289121 45.208 626 279 10 1000 1595 228 819 7.02e-157 498
MsaG029869 MtrunA17_Chr7g0275771 42.053 604 294 12 199 755 77 671 3.83e-140 457
MsaG029869 MtrunA17_Chr7g0275771 42.685 499 240 9 1007 1462 218 713 1.78e-110 374
MsaG029869 MtrunA17_Chr7g0275771 57.396 169 70 1 763 929 756 924 3.07e-53 203
MsaG029869 MtrunA17_Chr7g0275771 58.784 148 54 1 1455 1595 777 924 5.64e-49 190
MsaG029869 MtrunA17_Chr1g0192011 35.471 733 403 15 242 930 255 961 4.82e-136 447
MsaG029869 MtrunA17_Chr1g0192011 34.729 645 351 12 1000 1596 339 961 1.06e-112 382
MsaG029869 MtrunA17_Chr2g0289031 52.538 394 177 3 538 929 8 393 6.13e-125 396
MsaG029869 MtrunA17_Chr2g0289031 51.269 394 175 4 1211 1595 8 393 1.15e-121 387
MsaG029869 MtrunA17_Chr1g0147021 45.508 512 263 9 249 756 867 1366 5.95e-122 422
MsaG029869 MtrunA17_Chr1g0147021 45.946 444 226 7 990 1429 933 1366 3.93e-99 353
MsaG029869 MtrunA17_Chr1g0147021 66.912 136 45 0 785 920 1551 1686 1.54e-50 197
MsaG029869 MtrunA17_Chr1g0147021 63.235 136 43 1 1458 1586 1551 1686 9.43e-47 185
MsaG029869 MtrunA17_Chr2g0281051 33.201 756 417 13 252 928 207 953 3.89e-118 397
MsaG029869 MtrunA17_Chr2g0281051 32.689 673 360 14 1007 1594 289 953 9.18e-98 338
MsaG029869 MtrunA17_Chr4g0048531 36.181 597 279 15 418 930 699 1277 6.87e-101 354
MsaG029869 MtrunA17_Chr4g0048531 34.558 599 279 16 1091 1596 699 1277 3.29e-90 322
MsaG029869 MtrunA17_Chr4g0048531 35.795 176 101 4 252 417 260 433 1.19e-24 112
MsaG029869 MtrunA17_Chr4g0048531 40.230 87 49 1 1007 1090 347 433 8.06e-13 73.9
MsaG029869 MtrunA17_Chr8g0364421 49.593 246 97 3 360 597 3 229 6.04e-68 228
MsaG029869 MtrunA17_Chr8g0364421 49.590 244 96 3 1035 1270 5 229 1.49e-66 224
MsaG029869 MtrunA17_Chr7g0231061 56.593 182 74 2 1272 1450 12 191 1.10e-57 198
MsaG029869 MtrunA17_Chr7g0231061 57.062 177 73 1 599 772 12 188 2.69e-57 197
MsaG029869 MtrunA17_Chr1g0211701 80.000 115 23 0 818 932 4 118 2.91e-57 195
MsaG029869 MtrunA17_Chr1g0211701 72.727 121 26 1 1491 1604 4 124 3.53e-52 181
MsaG029869 MtrunA17_Chr8g0361381 48.020 202 101 1 1192 1393 11 208 1.28e-53 187
MsaG029869 MtrunA17_Chr8g0361381 48.649 185 91 1 536 720 28 208 7.42e-51 179
MsaG029869 MtrunA17_Chr2g0289091 69.369 111 34 0 784 894 310 420 3.74e-44 167
MsaG029869 MtrunA17_Chr2g0289091 54.930 142 63 1 1285 1426 23 163 2.65e-41 158
MsaG029869 MtrunA17_Chr2g0289091 53.521 142 65 1 612 753 23 163 8.88e-40 154
MsaG029869 MtrunA17_Chr2g0289091 63.063 111 34 1 1457 1560 310 420 1.02e-39 154
MsaG029869 MtrunA17_Chr8g0361391 71.910 89 24 1 784 872 50 137 9.27e-37 136
MsaG029869 MtrunA17_Chr8g0361391 62.500 88 27 1 1457 1538 50 137 8.60e-32 122
MsaG029869 MtrunA17_Chr2g0289041 37.981 208 106 5 274 463 2 204 6.48e-36 135
MsaG029869 MtrunA17_Chr2g0289041 38.710 155 74 4 1000 1136 53 204 6.10e-22 95.9
MsaG029869 MtrunA17_Chr8g0364411 55.357 112 50 0 252 363 33 144 3.82e-34 129
MsaG029869 MtrunA17_Chr1g0211671 87.097 62 8 0 871 932 15 76 4.36e-30 116
MsaG029869 MtrunA17_Chr1g0211671 83.871 62 10 0 1537 1598 15 76 1.97e-28 111
MsaG029869 MtrunA17_Chr8g0340381 67.857 84 23 2 1306 1389 36 115 4.58e-30 118
MsaG029869 MtrunA17_Chr8g0340381 57.724 123 33 4 633 755 36 139 3.31e-29 116
MsaG029869 MtrunA17_Chr6g0469821 41.000 200 59 7 26 225 1 141 4.23e-22 94.0
MsaG029869 MtrunA17_Chr2g0289101 33.071 127 65 3 381 489 5 129 3.76e-12 66.2
MsaG029869 MtrunA17_Chr2g0289101 32.283 127 66 3 1054 1162 5 129 3.11e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG029869 AT1G11950.1 46.772 697 331 11 252 929 193 868 0.0 614
MsaG029869 AT1G11950.1 47.002 617 280 11 1006 1595 272 868 4.59e-171 538
MsaG029869 AT1G11950.3 46.772 697 331 11 252 929 193 868 0.0 614
MsaG029869 AT1G11950.3 47.002 617 280 11 1006 1595 272 868 4.59e-171 538
MsaG029869 AT1G62310.1 47.170 689 328 10 252 918 209 883 0.0 611
MsaG029869 AT1G62310.1 47.533 608 278 9 1006 1584 288 883 5.15e-169 533
MsaG029869 AT1G11950.2 45.079 630 306 11 252 862 193 801 2.12e-166 524
MsaG029869 AT1G11950.2 44.727 550 257 11 1006 1528 272 801 6.92e-137 444
MsaG029869 AT3G07610.1 52.745 510 216 5 444 949 415 903 3.06e-163 522
MsaG029869 AT3G07610.1 52.918 497 204 5 1117 1599 415 895 3.08e-159 511
MsaG029869 AT3G07610.1 34.437 302 181 4 145 430 32 332 1.54e-46 183
MsaG029869 AT3G07610.1 39.259 135 70 1 970 1104 211 333 2.34e-22 105
MsaG029869 AT3G07610.3 50.662 529 220 6 444 949 415 925 2.52e-155 502
MsaG029869 AT3G07610.3 50.969 516 207 6 1117 1599 415 917 3.57e-152 493
MsaG029869 AT3G07610.3 34.437 302 181 4 145 430 32 332 1.31e-46 184
MsaG029869 AT3G07610.3 39.259 135 70 1 970 1104 211 333 2.18e-22 105
MsaG029869 AT4G00990.2 44.639 513 259 10 251 748 79 581 5.86e-125 410
MsaG029869 AT4G00990.2 45.861 447 219 8 990 1421 143 581 6.53e-108 363
MsaG029869 AT4G00990.2 66.667 87 29 0 784 870 684 770 3.76e-30 130
MsaG029869 AT4G00990.2 56.863 102 33 2 1442 1536 673 770 1.14e-26 119
MsaG029869 AT4G00990.3 44.639 513 259 10 251 748 79 581 6.95e-125 410
MsaG029869 AT4G00990.3 45.861 447 219 8 990 1421 143 581 7.61e-108 362
MsaG029869 AT4G00990.3 62.105 95 36 0 784 878 684 778 1.80e-30 130
MsaG029869 AT4G00990.3 53.636 110 40 2 1442 1544 673 778 5.49e-27 119
MsaG029869 AT4G00990.1 44.639 513 259 10 251 748 79 581 1.76e-124 411
MsaG029869 AT4G00990.1 45.861 447 219 8 990 1421 143 581 1.87e-107 363
MsaG029869 AT4G00990.1 60.959 146 57 0 784 929 684 829 3.27e-51 196
MsaG029869 AT4G00990.1 57.143 161 58 2 1442 1595 673 829 5.26e-49 189
MsaG029869 AT1G09060.2 32.357 751 420 18 228 930 181 891 3.37e-112 379
MsaG029869 AT1G09060.2 31.562 640 368 15 1000 1596 279 891 1.02e-88 311
MsaG029869 AT1G09060.1 32.357 751 420 18 228 930 181 891 3.37e-112 379
MsaG029869 AT1G09060.1 31.562 640 368 15 1000 1596 279 891 1.02e-88 311
MsaG029869 AT1G09060.4 32.357 751 420 18 228 930 195 905 5.15e-112 379
MsaG029869 AT1G09060.4 31.562 640 368 15 1000 1596 293 905 1.36e-88 311
MsaG029869 AT1G09060.3 32.357 751 420 18 228 930 195 905 5.15e-112 379
MsaG029869 AT1G09060.3 31.562 640 368 15 1000 1596 293 905 1.36e-88 311
MsaG029869 AT4G21430.1 29.533 728 429 15 247 928 222 911 3.69e-92 322
MsaG029869 AT4G21430.1 28.504 635 375 12 1007 1594 309 911 1.25e-73 266
MsaG029869 AT3G07610.2 54.122 279 123 1 1117 1395 415 688 3.76e-86 300
MsaG029869 AT3G07610.2 53.710 283 124 2 444 726 415 690 6.09e-84 293
MsaG029869 AT3G07610.2 34.437 302 181 4 145 430 32 332 3.55e-47 183
MsaG029869 AT3G07610.2 39.259 135 70 1 970 1104 211 333 2.19e-22 105

Find 372 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTAGATATTCCTTCAATT+TGG 0.122471 5:-82465286 None:intergenic
TAAAGGAATACCTTGTATTT+TGG 0.153940 5:-82462909 None:intergenic
GGATTCCTCTGAACTTAATT+TGG 0.160479 5:-82462329 None:intergenic
GGATTCCTCTGAACTTAATT+TGG 0.160479 5:-82478883 None:intergenic
AGTACATTGCTGACAATTAA+TGG 0.169966 5:-82463680 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5:+82464419 MsaT029869.1:CDS
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5:+82480968 MsaT029869.1:CDS
GGACTTGTGGAACCTCATTT+TGG 0.208763 5:-82478845 None:intergenic
TCGTCAGGAATGGGTTCTTC+TGG 0.213802 5:-82461752 None:intergenic
ACATCGCTCTCATTCAATTT+AGG 0.222022 5:-82462601 None:intergenic
CTTTATATATTCCTTCAATT+TGG 0.229259 5:-82481840 None:intergenic
GATACATACTCGATCTTAAT+TGG 0.230110 5:-82479817 None:intergenic
ACCCCTTAGAAGGTGCTATC+TGG 0.241380 5:+82481792 MsaT029869.1:CDS
CTTATGTCTCAATTTCTTAA+TGG 0.241484 5:-82465112 None:intergenic
TGACATTCATTATCGGCTTT+TGG 0.263135 5:-82463368 None:intergenic
TGACATTCATTATCGGCTTT+TGG 0.263135 5:-82479919 None:intergenic
ATCCCAAAGAGCACCTTCTA+AGG 0.269470 5:-82465241 None:intergenic
AGCACCTTGAGCAAGATAAA+AGG 0.269490 5:+82481687 MsaT029869.1:CDS
GGATTTGTATATTCTTTATA+AGG 0.271748 5:-82464483 None:intergenic
GGATTTGTATATTCTTTATA+AGG 0.271748 5:-82481032 None:intergenic
ATCCCTTAGAAGGTGCTCTT+TGG 0.273656 5:+82465238 MsaT029869.1:CDS
AGTACATTGCTGACAATTAC+AGG 0.278275 5:-82480231 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5:+82463769 MsaT029869.1:CDS
TTCTAAATACGATGAAGTTT+TGG 0.278404 5:+82480320 MsaT029869.1:CDS
ATCCCAGATAGCACCTTCTA+AGG 0.283008 5:-82481795 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 5:+82479784 MsaT029869.1:CDS
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5:-82462434 None:intergenic
TCAGACCATTTATTTGACTA+TGG 0.310342 5:+82465643 MsaT029869.1:CDS
AATGCACGCCACATGACTTT+TGG 0.316385 5:-82463731 None:intergenic
AATGCACGCCACATGACTTT+TGG 0.316385 5:-82480282 None:intergenic
TTTAGATATTCCTTCAATTT+GGG 0.317263 5:-82465285 None:intergenic
GGAATGGGTTCTTCTGGGTC+TGG 0.322740 5:-82461746 None:intergenic
TATGGATTTGCTCAGGATCT+TGG 0.334162 5:+82464588 MsaT029869.1:CDS
CTCCTCCATAGTCAGATAAA+TGG 0.336922 5:-82482158 None:intergenic
CTCCGTGATGGGAAGATTCT+AGG 0.337207 5:+82463233 MsaT029869.1:CDS
CTCGACTTCCTCATCATTGT+TGG 0.339463 5:-82462804 None:intergenic
CTCGACTTCCTCATCATTGT+TGG 0.339463 5:-82479356 None:intergenic
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5:+82464521 MsaT029869.1:CDS
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5:+82481070 MsaT029869.1:CDS
TCCCTTAGAAGGTGCTCTTT+GGG 0.346691 5:+82465239 MsaT029869.1:CDS
AAAAGGGAGCTAGTTGGTTA+TGG 0.357001 5:+82481704 MsaT029869.1:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5:-82463765 None:intergenic
AACTTCATCGTATTTAGAAT+TGG 0.357620 5:-82480316 None:intergenic
TATGGATTTGCTCATGATCT+TGG 0.362682 5:+82481137 MsaT029869.1:CDS
ATATCATCGGCGTTACTAAC+AGG 0.365196 5:-82463530 None:intergenic
GTTTGCTTTACATACTAATT+CGG 0.368956 5:-82479989 None:intergenic
GTTGAATAACGGTGAAAATT+CGG 0.370609 5:+82461937 MsaT029869.1:CDS
GCATACCCTGTTTGAACAAA+TGG 0.372456 5:+82462428 MsaT029869.1:CDS
ATAACATCGGCGTTACTAAC+AGG 0.373933 5:-82480081 None:intergenic
AAGAGGGAGCTACATGGTTA+TGG 0.374355 5:+82465150 MsaT029869.1:CDS
TCATACCATTTATCTGACTA+TGG 0.374732 5:+82482153 MsaT029869.1:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5:+82464370 MsaT029869.1:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5:+82480919 MsaT029869.1:CDS
TGTTAATCTGAAGATGAAAA+TGG 0.378352 5:-82461639 None:intergenic
AAAGGGAGCTAGTTGGTTAT+GGG 0.379755 5:+82481705 MsaT029869.1:CDS
ACTCGTGAGTGGTCAAGATC+TGG 0.380477 5:+82463311 MsaT029869.1:CDS
ATGCTCCATAGTCAAATAAA+TGG 0.380895 5:-82465648 None:intergenic
TTTGTCTCTCCTGAAAATAT+TGG 0.381247 5:+82482778 MsaT029869.1:CDS
AATCGTGAGTGGTCAAGATC+TGG 0.383517 5:+82479862 MsaT029869.1:CDS
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5:+82463492 MsaT029869.1:CDS
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5:+82480043 MsaT029869.1:CDS
TTGGCAGTTCTGTGATTTAT+CGG 0.388228 5:-82466329 None:intergenic
TTGGCGGATCTGTGATTTAT+CGG 0.388855 5:-82482838 None:intergenic
TTATTTGACTATGGAGCATA+AGG 0.388980 5:+82465652 MsaT029869.1:CDS
CTCAAAGCTAAATATAAAAC+CGG 0.396606 5:+82463011 MsaT029869.1:CDS
GTTGGAGGGGACCCCTTAGA+AGG 0.401130 5:+82481782 MsaT029869.1:CDS
CGTCAGGAATGGGTTCTTCT+GGG 0.401897 5:-82461751 None:intergenic
CTGCATCAAACACATTACTA+TGG 0.402452 5:-82464635 None:intergenic
GTGAAACTCAAGGAGGAGTA+TGG 0.411308 5:+82465674 MsaT029869.1:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5:+82463654 MsaT029869.1:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5:+82480205 MsaT029869.1:CDS
GAAGTATCCTTCTCATTTCA+AGG 0.417000 5:-82479951 None:intergenic
GATGGAGGGGATCCCTTAGA+AGG 0.417119 5:+82465228 MsaT029869.1:CDS
GATACATACTCGAGCTCAAT+TGG 0.418161 5:-82463266 None:intergenic
AATGTACTTGAATGTACATC+TGG 0.421952 5:+82463695 MsaT029869.1:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5:+82480246 MsaT029869.1:CDS
GAATGGGTTCTTCTGGGTCT+GGG 0.422717 5:-82461745 None:intergenic
CACTAATGATAGTGAGCTGC+TGG 0.422956 5:+82465206 MsaT029869.1:CDS
AGAGGGAGCTACATGGTTAT+GGG 0.424853 5:+82465151 MsaT029869.1:CDS
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5:-82462241 None:intergenic
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5:-82478795 None:intergenic
ACAGATTTCTATACTGTCCT+AGG 0.426836 5:+82480148 MsaT029869.1:CDS
TTAATGGCAGTAATTTCCTT+AGG 0.427741 5:-82465096 None:intergenic
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5:-82464504 None:intergenic
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5:-82481053 None:intergenic
TATCTGACTATGGAGGAGTA+TGG 0.429874 5:+82482163 MsaT029869.1:CDS
TCAATGTAAAAGAAGTGATA+AGG 0.432873 5:+82462363 MsaT029869.1:CDS
ATTGAATAACGGTGAAGGTT+CGG 0.432919 5:+82461820 MsaT029869.1:CDS
GAATGTTGGCGCCGCTGAAA+CGG 0.433221 5:+82461793 MsaT029869.1:CDS
TTTGTCTCTCCTGAACATAT+TGG 0.437752 5:+82466269 MsaT029869.1:CDS
ACTATAGGAAATGAAGTATA+AGG 0.443430 5:+82462775 MsaT029869.1:intron
ACCATGATGACATTCATTAT+CGG 0.447505 5:-82463375 None:intergenic
ACCATGATGACATTCATTAT+CGG 0.447505 5:-82479926 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5:+82463705 MsaT029869.1:CDS
AATGTACATCTGGTTTAAGC+TGG 0.447849 5:+82480256 MsaT029869.1:CDS
TAAATGGTCTGATCATGAAT+GGG 0.451339 5:-82465632 None:intergenic
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5:+82462222 MsaT029869.1:CDS
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5:+82478776 MsaT029869.1:CDS
TTCAACGACGCAGTTTCAGC+AGG 0.452822 5:-82461920 None:intergenic
TAAATGGTATGATCATGAAT+GGG 0.458309 5:-82482142 None:intergenic
CAGTGTTTCATCGTCAGGAA+TGG 0.461021 5:-82461762 None:intergenic
TTCCTCAGTTAAAGCTGCTA+TGG 0.461163 5:+82462090 MsaT029869.1:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 5:+82462853 MsaT029869.1:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 5:+82479405 MsaT029869.1:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5:+82464336 MsaT029869.1:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5:+82480885 MsaT029869.1:CDS
GCTGTTGACGGACGATGAAA+TGG 0.463517 5:+82462054 MsaT029869.1:CDS
ATAAGGAATACCTTGTCTCT+TGG 0.463609 5:-82479461 None:intergenic
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 5:-82463400 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5:+82462177 MsaT029869.1:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5:-82465851 None:intergenic
TTACCTTCAGATTTCTGACT+TGG 0.467821 5:-82482354 None:intergenic
GTAGGCAGTGTTTCATCGTC+AGG 0.467985 5:-82461767 None:intergenic
ATAAATGGTCTGATCATGAA+TGG 0.468212 5:-82465633 None:intergenic
AGTGTTTCATCGTCAGGAAT+GGG 0.468408 5:-82461761 None:intergenic
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5:+82463043 MsaT029869.1:CDS
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5:+82479594 MsaT029869.1:CDS
GCACCTTGAGCAAGATAAAA+GGG 0.472017 5:+82481688 MsaT029869.1:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5:+82464361 MsaT029869.1:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5:+82480910 MsaT029869.1:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5:-82464393 None:intergenic
TCTTTCAATTTCAACACCTC+AGG 0.472947 5:-82480942 None:intergenic
CCCCTTAGAAGGTGCTATCT+GGG 0.478828 5:+82481793 MsaT029869.1:CDS
TTAATGACAGTAATTTCCTC+AGG 0.479065 5:-82481650 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.480011 5:+82465133 MsaT029869.1:CDS
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5:-82462304 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5:-82478858 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.482748 5:+82464581 MsaT029869.1:CDS
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5:-82462312 None:intergenic
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5:-82478866 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5:-82462038 None:intergenic
ATAAATGGTATGATCATGAA+TGG 0.486755 5:-82482143 None:intergenic
GACCTCAAACTTGTCCTTGG+CGG 0.487327 5:-82482854 None:intergenic
TGTTGTTGCGAGCTCCGTGA+TGG 0.490189 5:+82463221 MsaT029869.1:CDS
ACTAATTCGGAGATGCAATT+CGG 0.494299 5:-82479976 None:intergenic
GTATATTTACGCGCATACCT+TGG 0.495273 5:-82483498 None:intergenic
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5:-82464344 None:intergenic
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5:-82480893 None:intergenic
TACGGTGGAGTCGCTGTTGA+CGG 0.498655 5:+82462042 MsaT029869.1:CDS
AAATACCTCAAACTTGTCCT+TGG 0.499489 5:-82466348 None:intergenic
TTGCTCATGATCTTGGACGT+GGG 0.502037 5:+82481144 MsaT029869.1:CDS
CGGACGATGAAATGGCAGCT+AGG 0.502074 5:+82462062 MsaT029869.1:CDS
GTAAAAGAAGTGATAAGGGC+AGG 0.502632 5:+82462368 MsaT029869.1:CDS
ATTTGGTTACATCCTCTCTC+CGG 0.503256 5:-82481823 None:intergenic
TCCCAGATAGCACCTTCTAA+GGG 0.503286 5:-82481794 None:intergenic
ACTAACTCGGAGATGCAATT+CGG 0.504538 5:-82463425 None:intergenic
CAATGTAAAAGAAGTGATAA+GGG 0.506714 5:+82462364 MsaT029869.1:CDS
ACTATAGGAAATGAAGCATA+AGG 0.507232 5:+82479327 MsaT029869.1:intron
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5:+82464397 MsaT029869.1:CDS
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5:+82480946 MsaT029869.1:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5:-82464540 None:intergenic
TCAGGCTTTAAACAATAATC+CGG 0.508635 5:-82481089 None:intergenic
GGACGATGAAATGGCAGCTA+GGG 0.509416 5:+82462063 MsaT029869.1:CDS
TGGCTATAAGGTAAATGTGT+TGG 0.509638 5:+82481601 MsaT029869.1:intron
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5:+82463326 MsaT029869.1:CDS
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5:+82479877 MsaT029869.1:CDS
AAGCACTCACCAATATGTTC+AGG 0.510499 5:-82466278 None:intergenic
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5:+82462261 MsaT029869.1:CDS
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5:+82478815 MsaT029869.1:CDS
GATAGTGACTTGGTGGTTGG+AGG 0.512169 5:+82481767 MsaT029869.1:CDS
AGAAGATGTACCCAAATTGA+AGG 0.514954 5:+82465275 MsaT029869.1:CDS
AGAGGATGTAACCAAATTGA+AGG 0.514954 5:+82481829 MsaT029869.1:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5:+82463653 MsaT029869.1:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5:+82480204 MsaT029869.1:CDS
GACTTGCAGGAATTGAACCT+TGG 0.517043 5:+82482278 MsaT029869.1:intron
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5:+82463798 MsaT029869.1:CDS
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5:+82480349 MsaT029869.1:CDS
TGTATATTCTTTATAAGGCA+AGG 0.521531 5:-82464478 None:intergenic
TGTATATTCTTTATAAGGCA+AGG 0.521531 5:-82481027 None:intergenic
TGTGTTATTGTGTATATCAT+CGG 0.523539 5:-82463543 None:intergenic
GACTTGTAGGAGTCGAACCT+TGG 0.524135 5:+82465775 MsaT029869.1:intron
CTCGTGAGTGGTCAAGATCT+GGG 0.525734 5:+82463312 MsaT029869.1:CDS
TATGAATCTTGGTGCCAATA+CGG 0.529389 5:+82462024 MsaT029869.1:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5:+82462877 MsaT029869.1:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5:+82479429 MsaT029869.1:CDS
ATCTGTGATTTATCGGAAGC+CGG 0.530939 5:-82482831 None:intergenic
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 5:+82463393 MsaT029869.1:CDS
GGTGAAAATTCGGTTGAAGC+TGG 0.533484 5:+82461947 MsaT029869.1:CDS
GTTGTTGCGAGCTCCGTGAT+GGG 0.536386 5:+82463222 MsaT029869.1:CDS
ACAGCACACAGGACATGCTT+CGG 0.536929 5:-82462626 None:intergenic
CCTTACCATTTGTTCAAACA+GGG 0.538038 5:-82462433 None:intergenic
ATCCGCCAAGGACAAGTTTG+AGG 0.538260 5:+82482852 MsaT029869.1:CDS
ACAGACCTCAAACTTGTCCT+TGG 0.538417 5:-82482857 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5:-82462218 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5:-82478772 None:intergenic
GCTAGTTGGTTATGGGGAGG+CGG 0.540172 5:+82481712 MsaT029869.1:CDS
ATCGTGAGTGGTCAAGATCT+GGG 0.541397 5:+82479863 MsaT029869.1:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5:+82463374 MsaT029869.1:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5:+82479925 MsaT029869.1:CDS
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 5:-82465137 None:intergenic
TAAGATGCACAAAATGCAAA+CGG 0.545481 5:+82462395 MsaT029869.1:CDS
AACAGATTCTTCTGCTACTG+CGG 0.546201 5:-82461981 None:intergenic
GGTGAAGGTTCGGTTGAAGC+TGG 0.546251 5:+82461830 MsaT029869.1:CDS
ATGGTTTCCTTGAAATGAGA+AGG 0.547108 5:+82479944 MsaT029869.1:CDS
ACTTGGTGAGGCAAGCCAGC+GGG 0.547254 5:-82482337 None:intergenic
GAAGAAAGAGACGTGGTAGC+CGG 0.548621 5:+82462199 MsaT029869.1:CDS
GAAGAAAGAGACGTGGTAGC+CGG 0.548621 5:+82478753 MsaT029869.1:intron
GATGCTGTTGTCATTCCCGC+TGG 0.548983 5:+82465819 MsaT029869.1:CDS
TATTTAGCTTTGAGAGTGAG+AGG 0.549143 5:-82463002 None:intergenic
TGCATGCACAATAGCTTGCT+AGG 0.549652 5:+82461602 None:intergenic
AGTGAACAACCACATTTCAA+TGG 0.549931 5:+82461661 MsaT029869.1:CDS
TCATCCAACCGTCTTAAATG+TGG 0.550657 5:-82462857 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 5:-82479409 None:intergenic
CAATTGCAGTCCTTTAAAGC+AGG 0.553168 5:+82465335 MsaT029869.1:CDS
GCACCTTGAGCAAGATAAGA+GGG 0.553810 5:+82465134 MsaT029869.1:CDS
AACTGCCAAGGACAAGTTTG+AGG 0.556463 5:+82466343 MsaT029869.1:CDS
TTTGCTCATGATCTTGGACG+TGG 0.556810 5:+82481143 MsaT029869.1:CDS
GAAGGAATCCACCGAAAATG+AGG 0.556975 5:+82462279 MsaT029869.1:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5:-82463634 None:intergenic
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5:-82480185 None:intergenic
GAAACTGCGTCGTTGAATAA+CGG 0.560168 5:+82461926 MsaT029869.1:CDS
ACACTGCCTACTTTGAATGT+TGG 0.561802 5:+82461779 MsaT029869.1:CDS
TGTTGTTGCGAGCTCCGTGG+TGG 0.562600 5:+82479772 MsaT029869.1:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5:-82465846 None:intergenic
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5:-82482349 None:intergenic
GTTGTTGCGAGCTCCGTGGT+GGG 0.565282 5:+82479773 MsaT029869.1:CDS
GACTTCTTCCACATTTAAGA+CGG 0.566290 5:+82462849 MsaT029869.1:CDS
GACTTCTTCCACATTTAAGA+CGG 0.566290 5:+82479401 MsaT029869.1:CDS
TGGTGTAGATCTACTGCCCT+AGG 0.567113 5:-82463614 None:intergenic
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5:+82463706 MsaT029869.1:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5:+82480257 MsaT029869.1:CDS
GTTGACGCATATCGCTAAAG+TGG 0.567629 5:+82465065 MsaT029869.1:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5:+82464546 MsaT029869.1:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5:+82481095 MsaT029869.1:CDS
ACTTGGTGAGGCAAACCAGC+GGG 0.568266 5:-82465834 None:intergenic
TAAAGTGGAACTGAAACCTA+AGG 0.569692 5:+82465080 MsaT029869.1:CDS
AACAGACTCTTCTGTTTCTG+CGG 0.571229 5:-82461864 None:intergenic
TGGTGTAGATCTACAGCCCT+AGG 0.571725 5:-82480165 None:intergenic
TTTCCTCCGCCATTGAAATG+TGG 0.572049 5:-82461670 None:intergenic
TTCTTCACTGGTTACACAAG+GGG 0.572201 5:+82464348 MsaT029869.1:CDS
TTCTTCACTGGTTACACAAG+GGG 0.572201 5:+82480897 MsaT029869.1:CDS
TTGCTCAGGATCTTGGACAC+GGG 0.573180 5:+82464595 MsaT029869.1:CDS
GGCATTTCGTACAGCTTCTG+TGG 0.573876 5:-82463178 None:intergenic
AATGATAGTGAGCTGCTGGA+TGG 0.573935 5:+82465210 MsaT029869.1:CDS
TTCTCTAAGTATATGCTGAA+AGG 0.574255 5:+82462827 MsaT029869.1:CDS
TTCTCTAAGTATATGCTGAA+AGG 0.574255 5:+82479379 MsaT029869.1:CDS
CACTAATGATAGTGACTTGG+TGG 0.574412 5:+82481760 MsaT029869.1:CDS
CAAGATAAAAGGGAGCTAGT+TGG 0.574795 5:+82481698 MsaT029869.1:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5:-82462350 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5:+82464545 MsaT029869.1:CDS
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5:+82481094 MsaT029869.1:CDS
AAATTGCAGTCCTTTAAAGC+AGG 0.577294 5:+82481889 MsaT029869.1:CDS
TGCTCATGATCTTGGACGTG+GGG 0.579297 5:+82481145 MsaT029869.1:CDS
TCCCAAAGAGCACCTTCTAA+GGG 0.579367 5:-82465240 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.579862 5:+82465144 MsaT029869.1:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5:-82464423 None:intergenic
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5:-82480972 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5:-82464341 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5:-82480890 None:intergenic
CAACCACATTTCAATGGCGG+AGG 0.582036 5:+82461667 MsaT029869.1:CDS
TGTGTTATTGTGTATAACAT+CGG 0.582130 5:-82480094 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5:+82464356 MsaT029869.1:CDS
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5:+82480905 MsaT029869.1:CDS
GTTTGCTTTAAATACTAACT+CGG 0.583154 5:-82463438 None:intergenic
ATAGTGAGCTGCTGGATGGA+GGG 0.586101 5:+82465214 MsaT029869.1:CDS
GTTGGCGCATATCGCTAAAG+TGG 0.586598 5:+82481619 MsaT029869.1:CDS
CTCCATAGCAGCTTTAACTG+AGG 0.586676 5:-82462092 None:intergenic
GAAGGAATCCACCCAAAATG+AGG 0.587016 5:+82478833 MsaT029869.1:CDS
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5:+82462144 MsaT029869.1:CDS
GCGGCGCCAACATTCAAAGT+AGG 0.589375 5:-82461785 None:intergenic
GAAAGAGAAGCCAAAATACA+AGG 0.593761 5:+82462899 MsaT029869.1:CDS
AGCTTCTGAATAAAAGTCCA+AGG 0.594960 5:-82465792 None:intergenic
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5:+82463475 MsaT029869.1:CDS
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5:+82480026 MsaT029869.1:CDS
TAAAAGAAGTGATAAGGGCA+GGG 0.596770 5:+82462369 MsaT029869.1:CDS
TCATCTTTAGAATGATCCAC+CGG 0.597336 5:-82479581 None:intergenic
TAATACCAAATTAAGTTCAG+AGG 0.597446 5:+82462324 MsaT029869.1:CDS
AATGATAGTGACTTGGTGGT+TGG 0.597880 5:+82481764 MsaT029869.1:CDS
ATAGTGACTTGGTGGTTGGA+GGG 0.599154 5:+82481768 MsaT029869.1:CDS
ATTCAATGACGCCGTTTCAG+CGG 0.599511 5:-82461804 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.600229 5:-82466319 None:intergenic
GAAAGAGAAGCCAAGAGACA+AGG 0.600316 5:+82479451 MsaT029869.1:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.601702 5:-82479786 None:intergenic
GAAACGGCGTCATTGAATAA+CGG 0.603965 5:+82461809 MsaT029869.1:CDS
AGCTTCTGAATAAAAGTCCA+AGG 0.609535 5:-82482295 None:intergenic
GGAGCATAAGGTGAAACTCA+AGG 0.610104 5:+82465664 MsaT029869.1:CDS
TCAACGACGCAGTTTCAGCA+GGG 0.610163 5:-82461919 None:intergenic
CAGATTTCTATACTGTCCTA+GGG 0.617894 5:+82480149 MsaT029869.1:CDS
TTTGCTCAGGATCTTGGACA+CGG 0.620390 5:+82464594 MsaT029869.1:CDS
CGCAACAACAGAGGAGACAA+AGG 0.621015 5:-82463208 None:intergenic
CGCAACAACAGAGGAGACAA+AGG 0.621015 5:-82479759 None:intergenic
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5:+82462239 MsaT029869.1:CDS
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5:+82478793 MsaT029869.1:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5:+82464346 MsaT029869.1:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5:+82480895 MsaT029869.1:CDS
TAGTGACTTGGTGGTTGGAG+GGG 0.631450 5:+82481769 MsaT029869.1:CDS
GATAGTGAGCTGCTGGATGG+AGG 0.632324 5:+82465213 MsaT029869.1:CDS
CACGGAGCTCGCAACAACAG+AGG 0.634726 5:-82479768 None:intergenic
ACGAGTCTACGACTCGTGAG+TGG 0.637239 5:+82463300 MsaT029869.1:CDS
CATCATCAAACACATTACAA+TGG 0.637797 5:-82481184 None:intergenic
TTCGGTTGAAGCTGGTGATG+TGG 0.638000 5:+82461838 MsaT029869.1:CDS
ACGAGTCTACGAATCGTGAG+TGG 0.638120 5:+82479851 MsaT029869.1:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5:+82465848 MsaT029869.1:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5:+82482351 MsaT029869.1:CDS
TGACACTAATGATAGTGACT+TGG 0.641602 5:+82481757 MsaT029869.1:CDS
CACCTAGAATCTTCCCATCA+CGG 0.641736 5:-82463235 None:intergenic
TCATCTTTAGAATGATCCGC+CGG 0.642794 5:-82463030 None:intergenic
GGTCGAAACCAACAATGATG+AGG 0.644580 5:+82462796 MsaT029869.1:CDS
GGTCGAAACCAACAATGATG+AGG 0.644580 5:+82479348 MsaT029869.1:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.646757 5:+82461955 MsaT029869.1:CDS
GATGATATACACAATAACAC+AGG 0.648393 5:+82463545 MsaT029869.1:CDS
CTCTGTTGTTGCGAGCTCCG+TGG 0.650643 5:+82479769 MsaT029869.1:CDS
GACTTGGTGAGGCAAACCAG+CGG 0.651120 5:-82465835 None:intergenic
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5:-82464420 None:intergenic
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5:-82480969 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5:+82463332 MsaT029869.1:CDS
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5:+82479883 MsaT029869.1:CDS
GACTTGGTGAGGCAAGCCAG+CGG 0.651967 5:-82482338 None:intergenic
CACGGAGCTCGCAACAACAG+AGG 0.652177 5:-82463217 None:intergenic
GCGTCATTGAATAACGGTGA+AGG 0.653749 5:+82461815 MsaT029869.1:CDS
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5:+82464547 MsaT029869.1:CDS
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5:+82481096 MsaT029869.1:CDS
GATAAATCACAGAACTGCCA+AGG 0.654153 5:+82466331 MsaT029869.1:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.655278 5:+82479787 MsaT029869.1:CDS
AAGGGAGCTAGTTGGTTATG+GGG 0.655659 5:+82481706 MsaT029869.1:CDS
GGAGCTACATGGTTATGGGG+AGG 0.658801 5:+82465155 MsaT029869.1:CDS
CCCAGATAGCACCTTCTAAG+GGG 0.660498 5:-82481793 None:intergenic
GAATCTTGGTGCCAATACGG+TGG 0.660922 5:+82462027 MsaT029869.1:CDS
AAAGCTAAATATAAAACCGG+CGG 0.661902 5:+82463014 MsaT029869.1:CDS
GAAAGAGACGTGGTAGCCGG+AGG 0.662313 5:+82462202 MsaT029869.1:CDS
GAAAGAGACGTGGTAGCCGG+AGG 0.662313 5:+82478756 MsaT029869.1:intron
TGAGTGCTTTCGTTTGACAG+AGG 0.664857 5:+82466292 MsaT029869.1:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5:-82464524 None:intergenic
AATCCGGCAACTTCACAGCA+AGG 0.666731 5:-82481073 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5:+82464347 MsaT029869.1:CDS
ATTCTTCACTGGTTACACAA+GGG 0.667170 5:+82480896 MsaT029869.1:CDS
AATTCGGAGATGCAATTCGG+AGG 0.667618 5:-82479973 None:intergenic
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5:+82462255 MsaT029869.1:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5:+82478809 MsaT029869.1:CDS
GATAAATCACAGATCCGCCA+AGG 0.668186 5:+82482840 MsaT029869.1:CDS
AAATGGTCTGATCATGAATG+GGG 0.669524 5:-82465631 None:intergenic
TAGTGAGCTGCTGGATGGAG+GGG 0.670026 5:+82465215 MsaT029869.1:CDS
GTTTGACAGAGGAATTCCGC+CGG 0.671961 5:+82482812 MsaT029869.1:CDS
TATACACAATAACACAGGGA+AGG 0.674794 5:+82463550 MsaT029869.1:CDS
GAGGGAGCTACATGGTTATG+GGG 0.674948 5:+82465152 MsaT029869.1:CDS
AACTCGGAGATGCAATTCGG+AGG 0.675073 5:-82463422 None:intergenic
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5:+82464377 MsaT029869.1:CDS
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5:+82480926 MsaT029869.1:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5:+82463723 MsaT029869.1:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5:+82480274 MsaT029869.1:CDS
GGAGCTAGTTGGTTATGGGG+AGG 0.683456 5:+82481709 MsaT029869.1:CDS
TACCATTTATCTGACTATGG+AGG 0.686950 5:+82482156 MsaT029869.1:CDS
AAATGGTATGATCATGAATG+GGG 0.688068 5:-82482141 None:intergenic
GAACAACCACATTTCAATGG+CGG 0.689649 5:+82461664 MsaT029869.1:CDS
CGAGTATGTATCACAGACTG+AGG 0.691844 5:+82479828 MsaT029869.1:CDS
TAAAGTGGAACTGAAACCTG+AGG 0.692071 5:+82481634 MsaT029869.1:CDS
ATGAAGTCAGCATGATGACG+AGG 0.692339 5:-82464450 None:intergenic
TGAGTGCTTGCGTTTGACAG+AGG 0.693789 5:+82482801 MsaT029869.1:CDS
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5:-82463199 None:intergenic
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5:-82479750 None:intergenic
ATGAACTCAGCATGATGACG+AGG 0.699370 5:-82480999 None:intergenic
CGTGATGGGAAGATTCTAGG+TGG 0.699741 5:+82463236 MsaT029869.1:CDS
TATACACAATAACACAACGA+AGG 0.701471 5:+82480101 MsaT029869.1:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5:+82462238 MsaT029869.1:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5:+82478792 MsaT029869.1:CDS
TTGCAATTATCACAGCACAC+AGG 0.707899 5:-82462637 None:intergenic
TGTGATTTATCGGAAGCCGG+CGG 0.708974 5:-82482828 None:intergenic
TAATTGCATAGATTGGTGTG+AGG 0.719281 5:+82463805 MsaT029869.1:CDS
TAATTGCATAGATTGGTGTG+AGG 0.719281 5:+82480356 MsaT029869.1:CDS
TTACAGGTCTGAGAAAACCA+AGG 0.720333 5:+82483481 MsaT029869.1:intron
AGGGCTGTAGATCTACACCA+TGG 0.725512 5:+82480168 MsaT029869.1:CDS
AGGGCAGTAGATCTACACCA+TGG 0.727684 5:+82463617 MsaT029869.1:CDS
AATAAAGGAAGAAAGAGACG+TGG 0.731452 5:+82462192 MsaT029869.1:CDS
AATAAAGGAAGAAAGAGACG+TGG 0.731452 5:+82478746 MsaT029869.1:intron
ATGATATACACAATAACACA+GGG 0.732608 5:+82463546 MsaT029869.1:CDS
CGAGTATGTATCACACACTG+AGG 0.758612 5:+82463277 MsaT029869.1:CDS
GCTATGGAGATAATGAAACG+CGG 0.761604 5:+82462106 MsaT029869.1:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5:+82463655 MsaT029869.1:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5:+82480206 MsaT029869.1:CDS
GCATAAGGTGAAACTCAAGG+AGG 0.774009 5:+82465667 MsaT029869.1:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.774532 5:+82463315 MsaT029869.1:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.775298 5:+82479866 MsaT029869.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr5 gene 82461605 82483514 82461605 ID=MsaG029869
Chr5 mRNA 82461605 82483514 82461605 ID=MsaT029869.1;Parent=MsaG029869
Chr5 exon 82461605 82462449 82461605 ID=MsaT029869.1.exon1;Parent=MsaT029869.1
Chr5 CDS 82461605 82462449 82461605 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82462597 82462696 82462597 ID=MsaT029869.1.exon2;Parent=MsaT029869.1
Chr5 CDS 82462597 82462696 82462597 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82462782 82462920 82462782 ID=MsaT029869.1.exon3;Parent=MsaT029869.1
Chr5 CDS 82462782 82462920 82462782 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82463001 82463064 82463001 ID=MsaT029869.1.exon4;Parent=MsaT029869.1
Chr5 CDS 82463001 82463064 82463001 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82463148 82463826 82463148 ID=MsaT029869.1.exon5;Parent=MsaT029869.1
Chr5 CDS 82463148 82463826 82463148 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82464327 82464656 82464327 ID=MsaT029869.1.exon6;Parent=MsaT029869.1
Chr5 CDS 82464327 82464656 82464327 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82465057 82465356 82465057 ID=MsaT029869.1.exon7;Parent=MsaT029869.1
Chr5 CDS 82465057 82465356 82465057 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82465623 82465695 82465623 ID=MsaT029869.1.exon8;Parent=MsaT029869.1
Chr5 CDS 82465623 82465695 82465623 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82465784 82465869 82465784 ID=MsaT029869.1.exon9;Parent=MsaT029869.1
Chr5 CDS 82465784 82465869 82465784 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82466245 82466364 82466245 ID=MsaT029869.1.exon10;Parent=MsaT029869.1
Chr5 CDS 82466245 82466364 82466245 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82466788 82466846 82466788 ID=MsaT029869.1.exon11;Parent=MsaT029869.1
Chr5 CDS 82466788 82466846 82466788 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82478761 82478891 82478761 ID=MsaT029869.1.exon12;Parent=MsaT029869.1
Chr5 CDS 82478761 82478891 82478761 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82478953 82478990 82478953 ID=MsaT029869.1.exon13;Parent=MsaT029869.1
Chr5 CDS 82478953 82478990 82478953 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82479334 82479472 82479334 ID=MsaT029869.1.exon14;Parent=MsaT029869.1
Chr5 CDS 82479334 82479472 82479334 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82479552 82479615 82479552 ID=MsaT029869.1.exon15;Parent=MsaT029869.1
Chr5 CDS 82479552 82479615 82479552 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82479699 82480377 82479699 ID=MsaT029869.1.exon16;Parent=MsaT029869.1
Chr5 CDS 82479699 82480377 82479699 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82480876 82481205 82480876 ID=MsaT029869.1.exon17;Parent=MsaT029869.1
Chr5 CDS 82480876 82481205 82480876 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82481611 82481910 82481611 ID=MsaT029869.1.exon18;Parent=MsaT029869.1
Chr5 CDS 82481611 82481910 82481611 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82482133 82482184 82482133 ID=MsaT029869.1.exon19;Parent=MsaT029869.1
Chr5 CDS 82482133 82482184 82482133 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82482287 82482372 82482287 ID=MsaT029869.1.exon20;Parent=MsaT029869.1
Chr5 CDS 82482287 82482372 82482287 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82482754 82482873 82482754 ID=MsaT029869.1.exon21;Parent=MsaT029869.1
Chr5 CDS 82482754 82482873 82482754 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82483253 82483311 82483253 ID=MsaT029869.1.exon22;Parent=MsaT029869.1
Chr5 CDS 82483253 82483311 82483253 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Chr5 exon 82483487 82483514 82483487 ID=MsaT029869.1.exon23;Parent=MsaT029869.1
Chr5 CDS 82483487 82483514 82483487 ID=cds.MsaT029869.1;Parent=MsaT029869.1
Gene Sequence

>MsaT029869.1

ATGCACAATAGCTTGCTAGGATTCGTTCGTCTCACCATTTTCATCTTCAGATTAACAGTGAACAACCACATTTCAATGGCGGAGGAAAAGAACAACGAAATTGTCACTTATAGAGTGAAAATCAAAGTCACACTCACTGTCCCAGACCCAGAAGAACCCATTCCTGACGATGAAACACTGCCTACTTTGAATGTTGGCGCCGCTGAAACGGCGTCATTGAATAACGGTGAAGGTTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGAAACAGAAGAGTCTGTTCCTGATCGAGAAAAACAAGCTATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATAACGGTGAAAATTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGACGATGAAATGGCAGCTAGGGATTCTTCCTCAGTTAAAGCTGCTATGGAGATAATGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGACGTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCGAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATAAGGGCAGGGTTATAAGATGCACAAAATGCAAACGGAGAAGATATTGCATACCCTGTTTGAACAAATGGTATCCTAAATTGAATGAGAGCGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGCAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGAAATGAAGTATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAAATACAAGGCCTCTCACTCTCAAAGCTAAATATAAAACCGGCGGATCATTCTAAAGATGAGCGTGTGATCTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACGAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGATGGGAAGATTCTAGGTGGTGCAGATCCAATTGAGCTCGAGTATGTATCACACACTGAGGACGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCGAATTGCATCTCCGAGTTAGTATTTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGATATACACAATAACACAGGGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTTTATACTGTCCTAGGGCAGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCATTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGACTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCAGGATCTTGGACACGGGAATTCAGTCACTAAGCTCCATAGTAATGTGTTTGATGCAGTAAATGTGTTGACGCATATCGCTAAAGTGGAACTGAAACCTAAGGAAATTACTGCCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTTATGGGGAGGCGCTTGATATATTTCATCGACACTCTTACACTAATGATAGTGAGCTGCTGGATGGAGGGGATCCCTTAGAAGGTGCTCTTTGGGATATTTTTCGGAGAGAAGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCAGTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCAGACCATTTATTTGACTATGGAGCATAAGGTGAAACTCAAGGAGGAGTATGGAGTCGAACCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTGTCATTCCCGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGTCGTGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGAACTGCCAAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGAAAGAGACGTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCCAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAATGCACAAAATGCAAACGAAGAAGATATTGCATACCCTGAAATGAAGCATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACAAGGCCTCTCACTCTCAAAGCTAAAAATAAAACCGGTGGATCATTCTAAAGATGAGCGTGTGATCTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGCGCAGATCCAATTAAGATCGAGTATGTATCACAGACTGAGGACGAGTCTACGAATCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAAATGAGAAGGATACTTCCTCCGAATTGCATCTCCGAATTAGTATGTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGTTATACACAATAACACAACGAAGGCATCTTTTCTTGAAAATTCAAGTGACAGATTTCTATACTGTCCTAGGGCTGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGAGTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCATGATCTTGGACGTGGGGATTCAGTGACTAAGCTCCATTGTAATGTGTTTGATGATGTAAATGTGTTGGCGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAAAGGGAGCTAGTTGGTTATGGGGAGGCGGTTGATATGTTTCATCAACAATCTGACACTAATGATAGTGACTTGGTGGTTGGAGGGGACCCCTTAGAAGGTGCTATCTGGGATATTTTCCGGAGAGAGGATGTAACCAAATTGAAGGAATATATAAAGAAGCATTTTAGAGAGTTCAGACATGTAAATTGCAGTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCATACCATTTATCTGACTATGGAGGAGTATGGAATTGAACCTTGGACTTTTATTCAGAAGCTTGGAGATGCTGTTTTCATTCCCGCTGGCTTGCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGTGAGTGCTTGCGTTTGACAGAGGAATTCCGCCGGCTTCCGATAAATCACAGATCCGCCAAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTAATTGAAAAATTAGAGAAAGAAAGGTCTGAGAAAACCAAGGTATGCGCGTAA
Protein sequence

>MsaT029869.1

MHNSLLGFVRLTIFIFRLTVNNHISMAEEKNNEIVTYRVKIKVTLTVPDPEEPIPDDETLPTLNVGAAETASLNNGEGSVEAGDVAAAETEESVPDREKQAMNGGPAETASLNNGENSVEAGDVAAAVAEESVPDREKQAMNLGANTVESLLTDDEMAARDSSSVKAAMEIMKRGRKSFAEIQKRKMDEEALLVSRIKEERDVVAGGSSSFQPERKKRGRKRKAEKESTENEVPQVHKKLNTKLSSEESLACHQCKRSDKGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPVCCDNCNCKACLRSFKLINEMKYKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKIQGLSLSKLNIKPADHSKDERVICDNCKTSIFDYHRSCTKCRFDLCLLCCCELRDGKILGGADPIELEYVSHTEDESTTREWSRSGWHANGDGSIPCPKADNECHHGFLELRRILPPNCISELVFKANELAETIKLQDVEETCDNRCSCLKPVSNADDIHNNTGKAAFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPLIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHADFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAQDLGHGNSVTKLHSNVFDAVNVLTHIAKVELKPKEITAIKKLRHKHLEQDKRELHGYGEALDIFHRHSYTNDSELLDGGDPLEGALWDIFRREDVPKLKEYLKKHFREFRHVNCSPLKQVIDPIHDQTIYLTMEHKVKLKEEYGVEPWTFIQKLGDAVVIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEEFRKLPINHRTAKDKFEVKKIVIHAMLDVIEKLEKERDVVAGGSSSFQPERKKRGRKRKAEKESTQNEVPQVHKKLNTKLNAQNANEEDIAYPEMKHKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKRQGLSLSKLKIKPVDHSKDERVICDNCKTSIFDYHRSCTKCRFDLCLLCCCELRGGKLLGGADPIKIEYVSQTEDESTNREWSRSGWHANGDGSIPCPKADNECHHGFLEMRRILPPNCISELVCKANELAETIKLQDVEETCDNRCSCLKPVSNADVIHNNTTKASFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHAEFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAHDLGRGDSVTKLHCNVFDDVNVLAHIAKVELKPEEITVIKKLRHKHLEQDKRELVGYGEAVDMFHQQSDTNDSDLVVGGDPLEGAIWDIFRREDVTKLKEYIKKHFREFRHVNCSPLKQVIDPIHDHTIYLTMEEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPENIGECLRLTEEFRRLPINHRSAKDKFEVKKIVIHAMLDVIEKLEKERSEKTKVCA*