AlfalfaGEDB | MsaG029878

M. sativa ssp. caerulea / MsaG029878

KEGG: K20793
GO: GO:0000070 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007064 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0022402 GO:0031365 GO:0034085 GO:0034087 GO:0034212 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043967 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0051276 GO:0051604 GO:0052858 GO:0061733 GO:0070601 GO:0071704 GO:0071840 GO:0071962 GO:0098813 GO:0140014 GO:1901564 GO:1903047
PFAM: PF00583.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029878	sp\|Q6GP53\|NAA50_XENLA	52.941	153	70	2	9	160	6	157	3.26e-52	167

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029878	tr\|G7K0Q8\|G7K0Q8_MEDTR	98.780	164	2	0	1	164	1	164	5.20e-117	337

TFs/TRs:

Gene ID	Type	Classification
MsaG029878	TR	GNAT

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000179	MsaG029878	0.804545	3.462995e-49	5.194987e-47
MsaG000292	MsaG029878	0.818743	2.918160e-52	6.209103e-50
MsaG000352	MsaG029878	0.825838	6.697749e-54	1.724321e-51
MsaG000380	MsaG029878	0.826915	3.720798e-54	9.870337e-52
MsaG000671	MsaG029878	0.806237	1.536858e-49	2.398473e-47
MsaG000858	MsaG029878	0.856165	7.504301e-62	5.057478e-59
MsaG000952	MsaG029878	0.821528	6.766980e-53	1.549711e-50
MsaG001004	MsaG029878	0.855337	1.305943e-61	8.540264e-59
MsaG001705	MsaG029878	0.861475	1.972512e-63	1.622270e-60
MsaG001739	MsaG029878	0.807809	7.169070e-50	1.161341e-47
MsaG002045	MsaG029878	0.836804	1.382326e-56	4.887902e-54
MsaG002294	MsaG029878	0.803350	6.120674e-49	8.931054e-47
MsaG002479	MsaG029878	0.800253	2.627714e-48	3.573096e-46
MsaG002560	MsaG029878	0.824494	1.386955e-53	3.441043e-51
MsaG002563	MsaG029878	0.821698	6.184634e-53	1.422780e-50
MsaG003067	MsaG029878	0.801193	1.692756e-48	2.351159e-46
MsaG003381	MsaG029878	0.821975	5.339015e-53	1.237322e-50
MsaG003423	MsaG029878	0.808937	4.130705e-50	6.875546e-48
MsaG003446	MsaG029878	0.806392	1.425437e-49	2.232796e-47
MsaG003537	MsaG029878	0.837582	8.761192e-57	3.172238e-54
MsaG003682	MsaG029878	0.822795	3.450638e-53	8.175627e-51
MsaG003870	MsaG029878	0.844761	1.159017e-58	5.269468e-56
MsaG003912	MsaG029878	0.807167	9.798308e-50	1.563047e-47
MsaG004030	MsaG029878	0.828204	1.831220e-54	5.036383e-52
MsaG004041	MsaG029878	0.801560	1.424970e-48	1.995740e-46
MsaG004094	MsaG029878	0.812839	5.961452e-51	1.091583e-48
MsaG004097	MsaG029878	0.802789	7.984461e-49	1.150061e-46
MsaG004230	MsaG029878	0.817247	6.332327e-52	1.296357e-49
MsaG004275	MsaG029878	0.821460	7.014509e-53	1.603477e-50
MsaG004313	MsaG029878	0.803150	6.728194e-49	9.772338e-47
MsaG004314	MsaG029878	0.805751	1.941706e-49	2.995724e-47
MsaG004370	MsaG029878	0.824449	1.420803e-53	3.520755e-51
MsaG004447	MsaG029878	0.857096	4.006928e-62	2.793964e-59
MsaG004554	MsaG029878	0.851790	1.350056e-60	7.784630e-58
MsaG004824	MsaG029878	0.820060	1.466555e-52	3.230689e-50
MsaG005049	MsaG029878	0.813568	4.130731e-51	7.703071e-49
MsaG005560	MsaG029878	0.813325	4.668660e-51	8.653016e-49
MsaG005564	MsaG029878	0.819732	1.741720e-52	3.803290e-50
MsaG005714	MsaG029878	0.806013	1.712190e-49	2.657792e-47
MsaG005761	MsaG029878	0.847732	1.813538e-59	9.102125e-57
MsaG005887	MsaG029878	0.825626	7.516109e-54	1.923522e-51
MsaG005981	MsaG029878	0.807808	7.173532e-50	1.162025e-47
MsaG006016	MsaG029878	0.808848	4.315825e-50	7.168359e-48
MsaG005957	MsaG029878	0.808305	5.629198e-50	9.228037e-48
MsaG006145	MsaG029878	0.814665	2.371633e-51	4.545948e-49
MsaG006052	MsaG029878	0.834309	5.871736e-56	1.926577e-53
MsaG006211	MsaG029878	0.803796	4.951479e-49	7.300020e-47
MsaG006218	MsaG029878	0.845391	7.848179e-59	3.642932e-56
MsaG006233	MsaG029878	0.830930	4.008832e-55	1.191478e-52
MsaG006250	MsaG029878	0.810557	1.859146e-50	3.218324e-48
MsaG006254	MsaG029878	0.832239	1.913969e-55	5.909230e-53
MsaG006256	MsaG029878	0.824765	1.198318e-53	2.994962e-51
MsaG006339	MsaG029878	0.801695	1.337280e-48	1.878705e-46
MsaG006387	MsaG029878	0.880204	1.404977e-69	2.559779e-66
MsaG006412	MsaG029878	0.857153	3.857471e-62	2.695106e-59
MsaG006420	MsaG029878	0.825543	7.862816e-54	2.007707e-51
MsaG006430	MsaG029878	0.814571	2.488145e-51	4.757826e-49
MsaG006440	MsaG029878	0.806263	1.517084e-49	2.369157e-47
MsaG006482	MsaG029878	0.833936	7.274205e-56	2.360276e-53
MsaG006521	MsaG029878	0.808949	4.107394e-50	6.838768e-48
MsaG006513	MsaG029878	0.803632	5.352437e-49	7.861076e-47
MsaG006658	MsaG029878	0.842925	3.575677e-58	1.531683e-55
MsaG006725	MsaG029878	0.861035	2.683214e-63	2.169959e-60
MsaG006763	MsaG029878	0.863104	6.267859e-64	5.492884e-61
MsaG006893	MsaG029878	0.830017	6.689066e-55	1.936811e-52
MsaG006891	MsaG029878	0.805648	2.041146e-49	3.141479e-47
MsaG006934	MsaG029878	0.820392	1.231849e-52	2.737568e-50
MsaG006980	MsaG029878	0.823223	2.745338e-53	6.579937e-51
MsaG006995	MsaG029878	0.817161	6.617906e-52	1.351838e-49
MsaG007038	MsaG029878	0.882794	1.648639e-70	3.394487e-67
MsaG007110	MsaG029878	0.823807	2.007683e-53	4.888971e-51
MsaG007112	MsaG029878	0.845981	5.437598e-59	2.573699e-56
MsaG007196	MsaG029878	0.826928	3.694852e-54	9.804993e-52
MsaG007171	MsaG029878	0.814909	2.095238e-51	4.041003e-49
MsaG007413	MsaG029878	0.847261	2.440429e-59	1.205556e-56
MsaG007526	MsaG029878	0.803645	5.319550e-49	7.815245e-47
MsaG007553	MsaG029878	0.814380	2.740168e-51	5.215055e-49
MsaG007554	MsaG029878	0.825728	7.111499e-54	1.825252e-51
MsaG007600	MsaG029878	0.811848	9.786005e-51	1.748468e-48
MsaG007602	MsaG029878	0.822776	3.486098e-53	8.255309e-51
MsaG007641	MsaG029878	0.800766	2.067127e-48	2.843716e-46
MsaG007683	MsaG029878	0.806866	1.133364e-49	1.795181e-47
MsaG007714	MsaG029878	0.819570	1.895390e-52	4.121360e-50
MsaG007767	MsaG029878	0.919124	1.695125e-86	2.997662e-82
MsaG007792	MsaG029878	0.804396	3.719322e-49	5.560238e-47
MsaG007918	MsaG029878	0.800488	2.354452e-48	3.218605e-46
MsaG008069	MsaG029878	0.816673	8.506561e-52	1.715795e-49
MsaG008105	MsaG029878	0.813615	4.034055e-51	7.531443e-49
MsaG008113	MsaG029878	0.844211	1.626650e-58	7.263049e-56
MsaG008164	MsaG029878	0.828417	1.627998e-54	4.504477e-52
MsaG008246	MsaG029878	0.845448	7.573140e-59	3.521751e-56
MsaG008357	MsaG029878	0.800713	2.119649e-48	2.912463e-46
MsaG008368	MsaG029878	0.835922	2.310703e-56	7.956880e-54
MsaG008442	MsaG029878	0.809456	3.201812e-50	5.396625e-48
MsaG008480	MsaG029878	0.809153	3.715486e-50	6.216608e-48
MsaG008604	MsaG029878	0.842338	5.112731e-58	2.149226e-55
MsaG008704	MsaG029878	0.801499	1.466617e-48	2.051232e-46
MsaG009439	MsaG029878	0.835466	3.010734e-56	1.022656e-53
MsaG009472	MsaG029878	0.844638	1.250182e-58	5.661163e-56
MsaG009566	MsaG029878	0.807003	1.060715e-49	1.685538e-47
MsaG009654	MsaG029878	0.803738	5.089221e-49	7.493201e-47
MsaG009765	MsaG029878	0.824536	1.355772e-53	3.367524e-51
MsaG009787	MsaG029878	0.804753	3.134747e-49	4.725367e-47
MsaG009863	MsaG029878	0.802888	7.616274e-49	1.099561e-46
MsaG010051	MsaG029878	0.824884	1.123792e-53	2.817923e-51
MsaG010062	MsaG029878	0.808412	5.341592e-50	8.779126e-48
MsaG010642	MsaG029878	0.840782	1.308556e-57	5.235099e-55
MsaG011044	MsaG029878	0.816734	8.248148e-52	1.666290e-49
MsaG011256	MsaG029878	0.806709	1.222965e-49	1.929997e-47
MsaG011286	MsaG029878	0.829262	1.018953e-54	2.886928e-52
MsaG011443	MsaG029878	0.814577	2.480097e-51	4.743202e-49
MsaG011580	MsaG029878	0.825295	8.994359e-54	2.280921e-51
MsaG011586	MsaG029878	0.813030	5.415608e-51	9.963940e-49
MsaG011697	MsaG029878	0.824067	1.745293e-53	4.280023e-51
MsaG011946	MsaG029878	0.827012	3.527727e-54	9.383326e-52
MsaG012339	MsaG029878	0.811055	1.452442e-50	2.545065e-48
MsaG012468	MsaG029878	0.845416	7.724741e-59	3.588532e-56
MsaG012670	MsaG029878	0.823365	2.544528e-53	6.122439e-51
MsaG012704	MsaG029878	0.807951	6.690379e-50	1.087486e-47
MsaG012997	MsaG029878	0.801566	1.420756e-48	1.990135e-46
MsaG013903	MsaG029878	0.809280	3.491698e-50	5.859754e-48
MsaG013904	MsaG029878	0.859203	9.532973e-63	7.190841e-60
MsaG014431	MsaG029878	0.806004	1.718930e-49	2.667733e-47
MsaG014543	MsaG029878	0.837098	1.163957e-56	4.152604e-54
MsaG014544	MsaG029878	0.830185	6.087186e-55	1.771023e-52
MsaG014725	MsaG029878	0.808048	6.380981e-50	1.039620e-47
MsaG015134	MsaG029878	0.809705	2.832311e-50	4.802417e-48
MsaG015193	MsaG029878	0.815857	1.292461e-51	2.553236e-49
MsaG015305	MsaG029878	0.801846	1.245739e-48	1.756128e-46
MsaG015318	MsaG029878	0.870635	2.562126e-66	3.049204e-63
MsaG015359	MsaG029878	0.824874	1.130018e-53	2.832721e-51
MsaG015925	MsaG029878	0.823783	2.034020e-53	4.949784e-51
MsaG016026	MsaG029878	0.836076	2.113652e-56	7.311852e-54
MsaG016174	MsaG029878	0.819847	1.640080e-52	3.592400e-50
MsaG016210	MsaG029878	0.812343	7.644006e-51	1.382502e-48
MsaG016489	MsaG029878	0.813092	5.249407e-51	9.673108e-49
MsaG016655	MsaG029878	0.818803	2.828395e-52	6.027608e-50
MsaG016862	MsaG029878	0.832931	1.292245e-55	4.071023e-53
MsaG016916	MsaG029878	0.838167	6.207698e-57	2.288480e-54
MsaG017088	MsaG029878	0.819739	1.734880e-52	3.789120e-50
MsaG017202	MsaG029878	0.850867	2.453351e-60	1.370023e-57
MsaG017588	MsaG029878	0.862787	7.842724e-64	6.788073e-61
MsaG017667	MsaG029878	0.845067	9.594690e-59	4.406622e-56
MsaG017722	MsaG029878	0.810470	1.941154e-50	3.353255e-48
MsaG017733	MsaG029878	0.823473	2.400886e-53	5.793523e-51
MsaG017931	MsaG029878	0.805580	2.108704e-49	3.240229e-47
MsaG018011	MsaG029878	0.801385	1.547304e-48	2.158501e-46
MsaG018113	MsaG029878	0.825024	1.041537e-53	2.621789e-51
MsaG018430	MsaG029878	0.816999	7.194591e-52	1.463489e-49
MsaG018483	MsaG029878	0.830648	4.697702e-55	1.384864e-52
MsaG018579	MsaG029878	0.839992	2.099922e-57	8.195681e-55
MsaG018523	MsaG029878	0.854608	2.121813e-61	1.351708e-58
MsaG018525	MsaG029878	0.837641	8.463724e-57	3.070030e-54
MsaG018594	MsaG029878	0.842494	4.650805e-58	1.964973e-55
MsaG018626	MsaG029878	0.810834	1.620800e-50	2.824773e-48
MsaG018689	MsaG029878	0.843528	2.473703e-58	1.080403e-55
MsaG018781	MsaG029878	0.841670	7.663817e-58	3.153539e-55
MsaG018843	MsaG029878	0.819360	2.115462e-52	4.574955e-50
MsaG019017	MsaG029878	0.844486	1.373079e-58	6.185932e-56
MsaG019556	MsaG029878	0.817885	4.555834e-52	9.480783e-50
MsaG019588	MsaG029878	0.852128	1.083172e-60	6.320811e-58
MsaG019656	MsaG029878	0.815322	1.698427e-51	3.310038e-49
MsaG019795	MsaG029878	0.807099	1.012555e-49	1.612643e-47
MsaG019783	MsaG029878	0.810950	1.529970e-50	2.674009e-48
MsaG020062	MsaG029878	0.813033	5.408660e-51	9.951814e-49
MsaG020205	MsaG029878	0.820465	1.185582e-52	2.639852e-50
MsaG020278	MsaG029878	0.821511	6.826728e-53	1.562690e-50
MsaG020429	MsaG029878	0.815820	1.317166e-51	2.599642e-49
MsaG020560	MsaG029878	0.833491	9.383018e-56	3.005094e-53
MsaG020715	MsaG029878	0.845391	7.848179e-59	3.642932e-56
MsaG020889	MsaG029878	0.854205	2.770103e-61	1.739660e-58
MsaG020933	MsaG029878	0.868139	1.646622e-65	1.766489e-62
MsaG020954	MsaG029878	0.815706	1.395935e-51	2.747150e-49
MsaG020946	MsaG029878	0.878487	5.660700e-69	9.526702e-66
MsaG021098	MsaG029878	0.827421	2.819043e-54	7.584642e-52
MsaG021410	MsaG029878	0.809483	3.159269e-50	5.328490e-48
MsaG021622	MsaG029878	0.816372	9.930077e-52	1.987589e-49
MsaG022085	MsaG029878	0.820533	1.144106e-52	2.552024e-50
MsaG022193	MsaG029878	0.802520	9.063670e-49	1.297570e-46
MsaG022437	MsaG029878	0.844696	1.206598e-58	5.473838e-56
MsaG022737	MsaG029878	0.856590	5.638739e-62	3.859902e-59
MsaG022728	MsaG029878	0.832450	1.698165e-55	5.275357e-53
MsaG022894	MsaG029878	0.817320	6.098984e-52	1.250907e-49
MsaG023120	MsaG029878	0.824738	1.215811e-53	3.036468e-51
MsaG023249	MsaG029878	0.813426	4.438728e-51	8.247843e-49
MsaG023614	MsaG029878	0.817643	5.161719e-52	1.067455e-49
MsaG023680	MsaG029878	0.829811	7.503256e-55	2.159726e-52
MsaG023830	MsaG029878	0.810222	2.194234e-50	3.767402e-48
MsaG023887	MsaG029878	0.821206	8.022857e-53	1.821750e-50
MsaG024036	MsaG029878	0.823500	2.366616e-53	5.715016e-51
MsaG024263	MsaG029878	0.804807	3.055239e-49	4.611291e-47
MsaG024283	MsaG029878	0.808371	5.451329e-50	8.950591e-48
MsaG024314	MsaG029878	0.825811	6.796198e-54	1.748375e-51
MsaG024484	MsaG029878	0.863140	6.111011e-64	5.363034e-61
MsaG024567	MsaG029878	0.820342	1.264945e-52	2.807494e-50
MsaG024620	MsaG029878	0.843122	3.171215e-58	1.367033e-55
MsaG024623	MsaG029878	0.805833	1.867285e-49	2.886390e-47
MsaG024640	MsaG029878	0.869268	7.130417e-66	8.013220e-63
MsaG024694	MsaG029878	0.854328	2.554855e-61	1.611509e-58
MsaG024908	MsaG029878	0.851371	1.771810e-60	1.006724e-57
MsaG025118	MsaG029878	0.833480	9.444902e-56	3.023903e-53
MsaG025152	MsaG029878	0.856276	6.964514e-62	4.713198e-59
MsaG025250	MsaG029878	0.820912	9.371704e-53	2.111510e-50
MsaG025282	MsaG029878	0.817532	5.466744e-52	1.127342e-49
MsaG025315	MsaG029878	0.838332	5.632193e-57	2.086893e-54
MsaG025346	MsaG029878	0.804424	3.669197e-49	5.488907e-47
MsaG025351	MsaG029878	0.824273	1.562399e-53	3.852982e-51
MsaG025496	MsaG029878	0.814001	3.320133e-51	6.258813e-49
MsaG025502	MsaG029878	0.823339	2.580138e-53	6.203781e-51
MsaG025542	MsaG029878	0.835487	2.975289e-56	1.011256e-53
MsaG025704	MsaG029878	0.869775	4.883990e-66	5.606355e-63
MsaG025714	MsaG029878	0.838406	5.390940e-57	2.002089e-54
MsaG025722	MsaG029878	0.835706	2.619352e-56	8.961091e-54
MsaG025845	MsaG029878	0.834283	5.958611e-56	1.953583e-53
MsaG025981	MsaG029878	0.827580	2.582098e-54	6.978662e-52
MsaG025928	MsaG029878	0.824133	1.685179e-53	4.139924e-51
MsaG026021	MsaG029878	0.842816	3.821574e-58	1.631271e-55
MsaG026041	MsaG029878	0.863072	6.411480e-64	5.611653e-61
MsaG026171	MsaG029878	0.806983	1.071180e-49	1.701371e-47
MsaG026221	MsaG029878	0.874140	1.758810e-67	2.435773e-64
MsaG026937	MsaG029878	0.832543	1.610586e-55	5.016723e-53
MsaG027087	MsaG029878	0.801565	1.421740e-48	1.991429e-46
MsaG027149	MsaG029878	0.803385	6.017619e-49	8.787998e-47
MsaG027171	MsaG029878	0.854071	3.027016e-61	1.891815e-58
MsaG027379	MsaG029878	0.803960	4.578216e-49	6.775541e-47
MsaG027469	MsaG029878	0.809094	3.824234e-50	6.389651e-48
MsaG027756	MsaG029878	0.860871	3.006901e-63	2.416762e-60
MsaG027980	MsaG029878	0.827155	3.261832e-54	8.710763e-52
MsaG028093	MsaG029878	0.802595	8.750706e-49	1.254908e-46
MsaG028251	MsaG029878	0.801155	1.723443e-48	2.391702e-46
MsaG028481	MsaG029878	0.812151	8.412824e-51	1.514275e-48
MsaG028487	MsaG029878	0.809875	2.604793e-50	4.434742e-48
MsaG028725	MsaG029878	0.813743	3.782291e-51	7.084145e-49
MsaG028681	MsaG029878	0.849310	6.664716e-60	3.528240e-57
MsaG028873	MsaG029878	0.823453	2.427325e-53	5.854036e-51
MsaG028982	MsaG029878	0.810754	1.686783e-50	2.933956e-48
MsaG028918	MsaG029878	0.822128	4.921565e-53	1.145276e-50
MsaG029058	MsaG029878	0.825818	6.772629e-54	1.742633e-51
MsaG029082	MsaG029878	0.817538	5.448741e-52	1.123817e-49
MsaG029096	MsaG029878	0.866548	5.282598e-65	5.311120e-62
MsaG029291	MsaG029878	0.817304	6.148745e-52	1.260623e-49
MsaG029362	MsaG029878	0.820641	1.080560e-52	2.417142e-50
MsaG029459	MsaG029878	0.844591	1.287180e-58	5.819169e-56
MsaG029512	MsaG029878	0.844106	1.735726e-58	7.723399e-56
MsaG029595	MsaG029878	0.825676	7.315384e-54	1.874791e-51
MsaG029719	MsaG029878	0.826276	5.275549e-54	1.374787e-51
MsaG029791	MsaG029878	0.834107	6.593673e-56	2.150323e-53
MsaG029868	MsaG029878	0.836266	1.891961e-56	6.582955e-54
MsaG029878	MsaG030047	0.841292	9.628894e-58	3.914881e-55
MsaG029878	MsaG030548	0.801114	1.756782e-48	2.435705e-46
MsaG029878	MsaG030710	0.825482	8.128946e-54	2.072109e-51
MsaG029878	MsaG030774	0.801056	1.804740e-48	2.498916e-46
MsaG029878	MsaG030786	0.839582	2.682011e-57	1.033305e-54
MsaG029878	MsaG031021	0.867860	2.021686e-65	2.144218e-62
MsaG029878	MsaG031026	0.856882	4.632128e-62	3.204612e-59
MsaG029878	MsaG031241	0.826419	4.879715e-54	1.276731e-51
MsaG029878	MsaG031674	0.805388	2.312736e-49	3.537954e-47
MsaG029878	MsaG032149	0.832375	1.772441e-55	5.493936e-53
MsaG029878	MsaG032404	0.831367	3.134678e-55	9.434990e-53
MsaG029878	MsaG033712	0.836380	1.769837e-56	6.179332e-54
MsaG029878	MsaG033903	0.813586	4.093413e-51	7.636900e-49
MsaG029878	MsaG034204	0.808444	5.258834e-50	8.649900e-48
MsaG029878	MsaG034231	0.807103	1.010674e-49	1.609788e-47
MsaG029878	MsaG034248	0.807993	6.554256e-50	1.066452e-47
MsaG029878	MsaG034308	0.806473	1.371065e-49	2.151769e-47
MsaG029878	MsaG034544	0.813447	4.391892e-51	8.165097e-49
MsaG029878	MsaG034676	0.851069	2.153485e-60	1.210976e-57
MsaG029878	MsaG034798	0.802794	7.964776e-49	1.147362e-46
MsaG029878	MsaG035104	0.817853	4.631752e-52	9.630752e-50
MsaG029878	MsaG035254	0.800811	2.024343e-48	2.787627e-46
MsaG029878	MsaG035255	0.876852	2.093099e-68	3.269425e-65
MsaG029878	MsaG035296	0.840947	1.185152e-57	4.766183e-55
MsaG029878	MsaG035409	0.821246	7.856733e-53	1.785886e-50
MsaG029878	MsaG035377	0.819204	2.294874e-52	4.942617e-50
MsaG029878	MsaG035414	0.818972	2.590626e-52	5.545568e-50
MsaG029878	MsaG035462	0.806201	1.563619e-49	2.438183e-47
MsaG029878	MsaG035659	0.800941	1.904585e-48	2.630379e-46
MsaG029878	MsaG035683	0.822299	4.495634e-53	1.050952e-50
MsaG029878	MsaG036062	0.800166	2.736003e-48	3.713024e-46
MsaG029878	MsaG036289	0.811083	1.432853e-50	2.512440e-48
MsaG029878	MsaG037816	0.801629	1.379700e-48	1.935385e-46
MsaG029878	MsaG038011	0.807038	1.043122e-49	1.658915e-47
MsaG029878	MsaG038973	0.828456	1.593407e-54	4.413697e-52
MsaG029878	MsaG039166	0.800722	2.110805e-48	2.900889e-46
MsaG029878	MsaG039418	0.824647	1.276844e-53	3.180960e-51
MsaG029878	MsaG039890	0.805979	1.740552e-49	2.699683e-47
MsaG029878	MsaG040264	0.805783	1.912084e-49	2.952222e-47
MsaG029878	MsaG040355	0.805761	1.932477e-49	2.982128e-47
MsaG029878	MsaG040480	0.812233	8.075872e-51	1.456557e-48
MsaG029878	MsaG040578	0.831541	2.842023e-55	8.598023e-53
MsaG029878	MsaG040583	0.851215	1.959922e-60	1.107674e-57
MsaG029878	MsaG040907	0.813169	5.049492e-51	9.322572e-49
MsaG029878	MsaG041342	0.823300	2.635008e-53	6.328753e-51
MsaG029878	MsaG041534	0.811243	1.323052e-50	2.329024e-48
MsaG029878	MsaG041790	0.829064	1.137484e-54	3.204887e-52
MsaG029878	MsaG041920	0.810964	1.519337e-50	2.656341e-48
MsaG029878	MsaG042065	0.849002	8.109768e-60	4.248349e-57
MsaG029878	MsaG042072	0.832409	1.737924e-55	5.392304e-53
MsaG029878	MsaG042138	0.808473	5.183815e-50	8.532590e-48
MsaG029878	MsaG042142	0.845341	8.094517e-59	3.750883e-56
MsaG029878	MsaG043879	0.808608	4.854553e-50	8.016337e-48
MsaG029878	MsaG044018	0.800714	2.118383e-48	2.910800e-46
MsaG029878	MsaG044120	0.811304	1.283322e-50	2.262514e-48
MsaG029878	MsaG044372	0.802782	8.008222e-49	1.153314e-46
MsaG029878	MsaG044522	0.811722	1.042316e-50	1.856498e-48
MsaG029878	MsaG044614	0.869696	5.181857e-66	5.928988e-63
MsaG029878	MsaG044694	0.805856	1.846466e-49	2.855751e-47
MsaG029878	MsaG044897	0.826152	5.644330e-54	1.465900e-51
MsaG029878	MsaG045461	0.819492	1.975013e-52	4.285794e-50
MsaG029878	MsaG045508	0.809796	2.708514e-50	4.602673e-48
MsaG029878	MsaG045590	0.865005	1.613848e-64	1.524975e-61
MsaG029878	MsaG045689	0.826960	3.630768e-54	9.643498e-52
MsaG029878	MsaG045695	0.823298	2.636810e-53	6.332890e-51
MsaG029878	MsaG045788	0.815726	1.382341e-51	2.721725e-49
MsaG029878	MsaG045807	0.812270	7.927615e-51	1.431162e-48
MsaG029878	MsaG045813	0.838675	4.596374e-57	1.721509e-54
MsaG029878	MsaG045870	0.826697	4.191620e-54	1.105215e-51
MsaG029878	MsaG045945	0.860926	2.894072e-63	2.330654e-60
MsaG029878	MsaG046031	0.850261	3.626341e-60	1.982822e-57
MsaG029878	MsaG046099	0.810202	2.216507e-50	3.803732e-48
MsaG029878	MsaG046268	0.853243	5.222525e-61	3.169239e-58
MsaG029878	MsaG046303	0.836564	1.590516e-56	5.583503e-54
MsaG029878	MsaG046411	0.845192	8.880323e-59	4.094633e-56
MsaG029878	MsaG046357	0.809442	3.224019e-50	5.432131e-48
MsaG029878	MsaG046537	0.821025	8.829273e-53	1.995333e-50
MsaG029878	MsaG046426	0.830915	4.043529e-55	1.201252e-52
MsaG029878	MsaG046662	0.802004	1.156178e-48	1.635716e-46
MsaG029878	MsaG046700	0.843148	3.122123e-58	1.346929e-55
MsaG029878	MsaG046845	0.816419	9.692268e-52	1.942289e-49
MsaG029878	MsaG047018	0.811703	1.052321e-50	1.873454e-48
MsaG029878	MsaG047029	0.825990	6.167644e-54	1.594584e-51
MsaG029878	MsaG001526	0.801060	1.801507e-48	2.494639e-46
MsaG029878	MsaG000003	0.833394	9.919648e-56	3.167843e-53
MsaG029878	MsaG002466	0.805903	1.804926e-49	2.794604e-47
MsaG029878	MsaG001947	0.800954	1.893227e-48	2.615448e-46
MsaG029878	MsaG002582	0.837434	9.558002e-57	3.445279e-54
MsaG029878	MsaG002307	0.826808	3.945969e-54	1.043607e-51
MsaG029878	MsaG002747	0.801759	1.297707e-48	1.825767e-46
MsaG029878	MsaG009719	0.853605	4.117316e-61	2.530670e-58
MsaG029878	MsaG008205	0.802435	9.434730e-49	1.348052e-46
MsaG029878	MsaG007163	0.834004	6.997117e-56	2.274890e-53
MsaG029878	MsaG010555	0.809688	2.855575e-50	4.839934e-48
MsaG029878	MsaG008702	0.818044	4.194301e-52	8.764410e-50
MsaG029878	MsaG012011	0.804019	4.451818e-49	6.597542e-47
MsaG029878	MsaG013186	0.845492	7.371672e-59	3.432869e-56
MsaG029878	MsaG013872	0.827665	2.465044e-54	6.677793e-52
MsaG029878	MsaG011491	0.822738	3.558101e-53	8.417036e-51
MsaG029878	MsaG016790	0.800167	2.734374e-48	3.710913e-46
MsaG029878	MsaG012734	0.840990	1.154589e-57	4.649586e-55
MsaG029878	MsaG016720	0.804534	3.482077e-49	5.222203e-47
MsaG029878	MsaG014799	0.833839	7.690562e-56	2.488162e-53
MsaG029878	MsaG013071	0.858522	1.520161e-62	1.117835e-59
MsaG029878	MsaG018567	0.804050	4.387246e-49	6.506609e-47
MsaG029878	MsaG022110	0.814336	2.802934e-51	5.328465e-49
MsaG029878	MsaG028203	0.813186	5.007493e-51	9.248964e-49
MsaG029878	MsaG027009	0.828863	1.271424e-54	3.562017e-52
MsaG029878	MsaG028385	0.800292	2.580091e-48	3.511410e-46
MsaG029878	MsaG027945	0.832436	1.711805e-55	5.315437e-53
MsaG029878	MsaG028817	0.808140	6.100925e-50	9.961825e-48
MsaG029878	MsaG026846	0.804530	3.488460e-49	5.231321e-47
MsaG029878	MsaG026793	0.828490	1.563288e-54	4.334347e-52
MsaG029878	MsaG027453	0.807763	7.331470e-50	1.186322e-47
MsaG029878	MsaG034293	0.812796	6.090148e-51	1.113956e-48
MsaG029878	MsaG033142	0.820033	1.487336e-52	3.274140e-50
MsaG029878	MsaG031226	0.821633	6.401840e-53	1.470181e-50
MsaG029878	MsaG033838	0.812141	8.455908e-51	1.521649e-48
MsaG029878	MsaG031626	0.862345	1.071215e-63	9.111844e-61
MsaG029878	MsaG033074	0.812158	8.386007e-51	1.509682e-48
MsaG029878	MsaG033458	0.801654	1.363229e-48	1.913380e-46
MsaG029878	MsaG031225	0.802647	8.537868e-49	1.225822e-46
MsaG029878	MsaG030582	0.843799	2.095356e-58	9.230620e-56
MsaG029878	MsaG032865	0.824660	1.268068e-53	3.160281e-51
MsaG029878	MsaG034539	0.804577	3.410794e-49	5.120406e-47
MsaG029878	MsaG031808	0.827514	2.678176e-54	7.224471e-52
MsaG029878	MsaG031900	0.862325	1.086743e-63	9.236331e-61
MsaG029878	MsaG031810	0.812870	5.867834e-51	1.075292e-48
MsaG029878	MsaG030207	0.817681	5.062629e-52	1.047981e-49
MsaG029878	MsaG037392	0.816492	9.336882e-52	1.874583e-49
MsaG029878	MsaG044257	0.823513	2.350467e-53	5.678040e-51
MsaG029878	MsaG043086	0.816103	1.139761e-51	2.265682e-49
MsaG029878	MsaG042304	0.864640	2.098044e-64	1.953828e-61
MsaG029878	MsaG041446	0.817101	6.825796e-52	1.392135e-49
MsaG029878	MsaG044400	0.802427	9.471794e-49	1.353103e-46
MsaG029878	MsaG043095	0.856612	5.555476e-62	3.805854e-59
MsaG029878	MsaG043528	0.859129	1.003074e-62	7.544764e-60
MsaG029878	MsaG041543	0.821955	5.397256e-53	1.250130e-50
MsaG029878	MsaG047040	0.851546	1.581785e-60	9.042219e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029878	MtrunA17_Chr5g0448431	98.780	164	2	0	1	164	1	164	1.00e-120	337
MsaG029878	MtrunA17_Chr5g0395301	27.632	152	87	3	14	142	17	168	4.98e-15	70.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG029878	AT5G11340.1	78.049	164	36	0	1	164	1	164	2.53e-97	278
MsaG029878	AT5G16800.1	23.926	163	101	3	4	143	20	182	2.16e-12	63.2
MsaG029878	AT5G16800.2	23.926	163	101	3	4	143	20	182	4.01e-12	62.8
MsaG029878	AT5G16800.3	23.926	163	101	3	4	143	20	182	5.87e-12	62.4

Find 28 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATTTCTTATAAAAGTTAA+TGG	0.199299	5:+82674802	None:intergenic
TGATGTTTACGTAATAGTTC+TGG	0.333615	5:+82674756	None:intergenic
CGGGTTTACATCATGACTTT+AGG	0.340929	5:-82675198	MsaT029878.1:CDS
AGAAGGAAGGTGGGCAAGTT+CGG	0.349914	5:-82675218	MsaT029878.1:CDS
GAAGGAAGGTGGGCAAGTTC+GGG	0.372201	5:-82675217	MsaT029878.1:CDS
TATTTGTCGTTGTAACGAAC+AGG	0.385879	5:+82677988	None:intergenic
GGATAGGAAAGAACCTAGTT+TGG	0.407491	5:+82677933	None:intergenic
CCTTACCGTGGACTTGGTAT+TGG	0.408366	5:-82675165	MsaT029878.1:intron
GAAGTATCAATCTCATTAGA+TGG	0.418274	5:-82678063	MsaT029878.1:CDS
TTAGCGCCTTACCGTGGACT+TGG	0.429752	5:-82675171	MsaT029878.1:CDS
TGCGTGCCGGCTTGAGAAGA+AGG	0.483070	5:-82675235	MsaT029878.1:CDS
TCCGCTGATTTCACCAAACT+AGG	0.503020	5:-82677946	MsaT029878.1:intron
GTGTTGGCGCAATTGCGTGC+CGG	0.514629	5:-82675248	MsaT029878.1:CDS
CACCTTCCTTCTTCTCAAGC+CGG	0.529491	5:+82675229	None:intergenic
CGCGAAGCAGAACATTTCTG+AGG	0.551841	5:-82674858	MsaT029878.1:CDS
TACTACAGTGACATTTGTGT+TGG	0.556487	5:-82675264	MsaT029878.1:CDS
TTTGGGTTTATGCAGGAACA+AGG	0.566199	5:-82674907	MsaT029878.1:intron
GAAGTAGAATCAATGGGAGC+TGG	0.568816	5:-82678090	None:intergenic
CGGCTTGAGAAGAAGGAAGG+TGG	0.571876	5:-82675228	MsaT029878.1:CDS
GGCTTGAGAAGAAGGAAGGT+GGG	0.574382	5:-82675227	MsaT029878.1:CDS
CTTGTGACAACATAACAGTC+TGG	0.600627	5:+82674728	None:intergenic
TGCCGGCTTGAGAAGAAGGA+AGG	0.603686	5:-82675231	MsaT029878.1:CDS
CCAATACCAAGTCCACGGTA+AGG	0.611714	5:+82675165	None:intergenic
ATTTGTCGTTGTAACGAACA+GGG	0.627678	5:+82677989	None:intergenic
TCTTACCAATACCAAGTCCA+CGG	0.630487	5:+82675160	None:intergenic
ACCTAGTTTGGTGAAATCAG+CGG	0.645414	5:+82677945	None:intergenic
CAGACTGTTATGTTGTCACA+AGG	0.649227	5:-82674727	MsaT029878.1:CDS
GTGACAACATAACAGTCTGG+TGG	0.757743	5:+82674731	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	82674697	82678100	82674697	ID=MsaG029878
Chr5	mRNA	82674697	82678100	82674697	ID=MsaT029878.1;Parent=MsaG029878
Chr5	exon	82674697	82674914	82674697	ID=MsaT029878.1.exon3;Parent=MsaT029878.1
Chr5	CDS	82674697	82674914	82674697	ID=cds.MsaT029878.1;Parent=MsaT029878.1
Chr5	exon	82675166	82675288	82675166	ID=MsaT029878.1.exon2;Parent=MsaT029878.1
Chr5	CDS	82675166	82675288	82675166	ID=cds.MsaT029878.1;Parent=MsaT029878.1
Chr5	exon	82677947	82678100	82677947	ID=MsaT029878.1.exon1;Parent=MsaT029878.1
Chr5	CDS	82677947	82678100	82677947	ID=cds.MsaT029878.1;Parent=MsaT029878.1

Gene Sequence

>MsaT029878.1

ATGGGAGCTGGTCGTGAAGTATCAATCTCATTAGATGGAGTAAGAGACAAGAACATTATGCAACTCAAGAAGCTTAATCTTGCTCTTTTCCCTGTTCGTTACAACGACAAATACTATGCTGATGCTCTTGCTTCCGCTGATTTCACCAAACTAGCGTACTACAGTGACATTTGTGTTGGCGCAATTGCGTGCCGGCTTGAGAAGAAGGAAGGTGGGCAAGTTCGGGTTTACATCATGACTTTAGGTGTTTTAGCGCCTTACCGTGGACTTGGTATTGGAACAAGGCTGCTGAATCATGTTATTGATCTTTGCGCGAAGCAGAACATTTCTGAGGTTTACTTGCATGTGCAGACAAACAACGAAGATGCCATTAACTTTTATAAGAAATTTGAGTTTGAAATTACAGAAACTATCCAGAACTATTACGTAAACATCACACCACCAGACTGTTATGTTGTCACAAGGCACATAGCACCTAGCCCAACAAAAAAATAA

Protein sequence

>MsaT029878.1

MGAGREVSISLDGVRDKNIMQLKKLNLALFPVRYNDKYYADALASADFTKLAYYSDICVGAIACRLEKKEGGQVRVYIMTLGVLAPYRGLGIGTRLLNHVIDLCAKQNISEVYLHVQTNNEDAINFYKKFEFEITETIQNYYVNITPPDCYVVTRHIAPSPTKK*