AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG030043

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG030043 MtrunA17_Chr6g0452001 97.765 1387 24 3 1 1380 1 1387 0.0 2793
MsaG030043 MtrunA17_Chr5g0415031 51.233 1460 576 35 1 1377 1 1407 0.0 1281
MsaG030043 MtrunA17_Chr8g0364231 50.000 1470 576 33 1 1377 1 1404 0.0 1273
MsaG030043 MtrunA17_Chr6g0452021 67.654 439 84 7 49 480 33 420 0.0 560
MsaG030043 MtrunA17_Chr8g0368731 44.426 619 277 17 660 1242 26 613 2.46e-135 429
MsaG030043 MtrunA17_Chr1g0206771 43.421 152 79 1 56 207 13 157 4.61e-29 115
MsaG030043 MtrunA17_Chr1g0206771 53.623 69 32 0 59 127 95 163 1.68e-15 76.3
MsaG030043 MtrunA17_Chr1g0206781 61.905 84 32 0 51 134 3 86 1.40e-27 108
MsaG030043 MtrunA17_Chr3g0077911 40.506 158 85 4 53 207 2 153 1.22e-22 95.9
MsaG030043 MtrunA17_Chr3g0077911 58.974 78 31 1 52 128 83 160 1.45e-19 87.4
MsaG030043 MtrunA17_Chr3g0077881 38.509 161 93 3 53 207 2 162 1.10e-21 94.0
MsaG030043 MtrunA17_Chr3g0077881 52.703 74 34 1 55 127 95 168 3.37e-15 75.1
MsaG030043 MtrunA17_Chr3g0077891 40.373 161 90 3 53 207 2 162 1.27e-21 93.6
MsaG030043 MtrunA17_Chr3g0077891 58.108 74 30 1 55 127 95 168 2.75e-20 89.7
MsaG030043 MtrunA17_Chr1g0205821 34.211 152 100 0 57 208 11 162 1.34e-21 93.6
MsaG030043 MtrunA17_Chr1g0205821 44.595 74 41 0 60 133 100 173 1.20e-13 70.9
MsaG030043 MtrunA17_Chr4g0075861 40.000 160 86 3 49 208 3 152 1.68e-21 98.6
MsaG030043 MtrunA17_Chr4g0075861 34.810 158 100 1 51 208 81 235 2.44e-18 89.0
MsaG030043 MtrunA17_Chr4g0075861 53.947 76 33 1 53 128 168 241 5.31e-15 78.6
MsaG030043 MtrunA17_Chr7g0218911 46.809 94 41 2 63 154 2 88 3.03e-21 90.5
MsaG030043 MtrunA17_Chr3g0077861 39.241 158 87 4 53 207 2 153 4.37e-21 92.0
MsaG030043 MtrunA17_Chr3g0077861 58.974 78 31 1 52 128 83 160 4.56e-20 89.0
MsaG030043 MtrunA17_Chr8g0364021 47.525 101 50 1 50 147 32 132 9.81e-21 93.2
MsaG030043 MtrunA17_Chr1g0205811 55.263 76 34 0 59 134 14 89 3.27e-20 87.8
MsaG030043 MtrunA17_Chr4g0075971 39.073 151 83 2 58 208 11 152 2.93e-19 93.6
MsaG030043 MtrunA17_Chr4g0075971 34.615 156 99 1 53 208 83 235 3.44e-16 84.0
MsaG030043 MtrunA17_Chr4g0075971 53.947 76 33 1 53 128 168 241 1.34e-14 79.0
MsaG030043 MtrunA17_Chr3g0077941 38.125 160 94 3 53 207 2 161 8.02e-19 85.5
MsaG030043 MtrunA17_Chr3g0077941 51.351 74 35 1 55 127 94 167 7.56e-16 77.0
MsaG030043 MtrunA17_Chr1g0205861 40.000 95 52 1 48 137 5 99 3.41e-16 76.3
MsaG030043 MtrunA17_Chr8g0362641 42.553 94 54 0 336 429 192 285 3.70e-16 80.9
MsaG030043 MtrunA17_Chr8g0362641 45.349 86 47 0 332 417 107 192 1.12e-15 79.3
MsaG030043 MtrunA17_Chr7g0218891 31.818 154 99 3 59 208 99 250 1.55e-15 78.6
MsaG030043 MtrunA17_Chr7g0218891 31.336 217 131 8 60 266 14 222 2.43e-15 78.2
MsaG030043 MtrunA17_Chr7g0218891 41.463 82 46 1 59 138 185 266 3.18e-11 65.9
MsaG030043 MtrunA17_Chr1g0156171 36.943 157 39 6 89 245 17 113 1.98e-15 74.3
MsaG030043 MtrunA17_Chr1g0205801 46.154 78 42 0 57 134 10 87 2.33e-15 73.6
MsaG030043 MtrunA17_Chr2g0328701 41.176 102 51 2 58 159 28 120 4.81e-15 73.2
MsaG030043 MtrunA17_Chr1g0209201 35.833 120 67 2 56 175 13 122 7.17e-15 73.2
MsaG030043 MtrunA17_Chr3g0077811 48.052 77 39 1 53 128 7 83 5.39e-13 67.0
MsaG030043 MtrunA17_Chr7g0256011 45.679 81 43 1 47 127 5 84 6.30e-13 67.0
MsaG030043 MtrunA17_Chr1g0205831 30.872 149 88 1 61 209 4 137 1.66e-12 67.4
MsaG030043 MtrunA17_Chr7g0218901 45.455 55 30 0 153 207 1 55 5.08e-12 62.0
MsaG030043 MtrunA17_Chr5g0415081 41.667 72 40 1 138 207 13 84 5.89e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG030043 AT5G15020.2 57.507 1412 509 26 1 1379 1 1354 0.0 1484
MsaG030043 AT5G15020.1 57.022 1424 509 27 1 1379 1 1366 0.0 1476
MsaG030043 AT3G01320.1 56.608 1415 534 33 1 1378 1 1372 0.0 1435
MsaG030043 AT3G01320.2 56.414 1411 531 33 1 1378 1 1360 0.0 1422
MsaG030043 AT1G70060.2 48.098 1393 589 34 48 1377 3 1324 0.0 1146
MsaG030043 AT1G70060.1 48.098 1393 589 34 48 1377 3 1324 0.0 1146
MsaG030043 AT1G24190.3 49.194 1364 575 39 45 1352 3 1304 0.0 1142
MsaG030043 AT1G24190.2 49.194 1364 575 39 45 1352 3 1304 0.0 1140
MsaG030043 AT1G24190.1 48.977 1368 576 40 45 1352 3 1308 0.0 1133
MsaG030043 AT1G59890.2 51.648 455 187 7 405 829 249 700 4.32e-133 440
MsaG030043 AT1G59890.2 45.648 471 203 12 938 1377 717 1165 1.26e-105 363
MsaG030043 AT1G59890.2 51.103 272 109 7 1 270 1 250 6.68e-62 232
MsaG030043 AT1G59890.4 43.471 582 243 10 330 829 118 695 1.60e-131 435
MsaG030043 AT1G59890.4 47.126 435 188 10 938 1352 712 1124 9.16e-104 358
MsaG030043 AT1G59890.4 51.103 272 109 7 1 270 1 250 6.74e-62 232
MsaG030043 AT1G59890.1 43.471 582 243 10 330 829 118 695 3.31e-131 435
MsaG030043 AT1G59890.1 45.648 471 203 12 938 1377 712 1160 1.75e-105 363
MsaG030043 AT1G59890.1 51.103 272 109 7 1 270 1 250 7.52e-62 232
MsaG030043 AT1G59890.3 43.127 582 241 11 330 829 118 691 1.01e-127 425
MsaG030043 AT1G59890.3 45.648 471 203 12 938 1377 708 1156 1.42e-105 363
MsaG030043 AT1G59890.3 51.103 272 109 7 1 270 1 250 6.30e-62 232
MsaG030043 AT1G10450.2 47.033 455 219 8 434 869 264 715 1.39e-120 404
MsaG030043 AT1G10450.2 44.266 436 222 8 938 1368 689 1108 3.45e-97 338
MsaG030043 AT1G10450.2 44.966 298 121 8 1 297 1 256 4.86e-58 220
MsaG030043 AT1G10450.1 47.033 455 219 8 434 869 264 715 1.39e-120 404
MsaG030043 AT1G10450.1 44.266 436 222 8 938 1368 689 1108 3.45e-97 338
MsaG030043 AT1G10450.1 44.966 298 121 8 1 297 1 256 4.86e-58 220
MsaG030043 AT1G10450.3 47.033 455 219 8 434 869 315 766 5.74e-120 404
MsaG030043 AT1G10450.3 44.266 436 222 8 938 1368 740 1159 6.22e-97 338
MsaG030043 AT1G10450.3 44.966 298 121 8 1 297 52 307 7.13e-58 219
MsaG030043 AT1G24200.1 60.123 163 59 2 45 207 3 159 2.31e-53 186
MsaG030043 AT1G70030.1 53.846 156 70 2 52 207 4 157 7.83e-47 165
MsaG030043 AT5G15025.1 55.970 134 46 2 1 133 1 122 2.10e-38 140
MsaG030043 AT1G70030.2 44.231 156 53 2 52 207 15 136 2.02e-30 117
MsaG030043 AT5G35610.1 42.953 149 70 3 51 188 2 146 2.00e-28 112
MsaG030043 AT1G70030.3 53.704 108 49 1 52 159 15 121 2.44e-28 111
MsaG030043 AT1G24230.1 39.735 151 86 3 54 203 81 227 5.92e-27 111
MsaG030043 AT1G24230.1 31.361 169 98 4 48 213 3 156 1.09e-16 81.6
MsaG030043 AT1G10250.1 70.000 70 20 1 1145 1213 1 70 1.51e-23 95.9
MsaG030043 AT1G24250.1 37.342 158 75 2 56 212 117 251 3.71e-23 100
MsaG030043 AT1G23810.1 35.032 157 78 2 56 211 106 239 5.19e-22 97.1
MsaG030043 AT1G27280.1 35.616 146 93 1 47 191 69 214 5.26e-22 96.7
MsaG030043 AT4G12020.11 55.914 93 35 2 41 133 295 381 8.69e-22 103
MsaG030043 AT4G12020.1 55.914 93 35 2 41 133 295 381 9.31e-22 103
MsaG030043 AT4G12020.9 55.914 93 35 2 41 133 295 381 9.31e-22 103
MsaG030043 AT4G12020.6 55.914 93 35 2 41 133 295 381 9.66e-22 103
MsaG030043 AT4G12020.8 55.914 93 35 2 41 133 295 381 9.66e-22 103
MsaG030043 AT4G12020.7 55.914 93 35 2 41 133 295 381 9.70e-22 103
MsaG030043 AT4G12020.3 55.914 93 35 2 41 133 295 381 1.03e-21 103
MsaG030043 AT4G12020.10 55.914 93 35 2 41 133 295 381 1.04e-21 103
MsaG030043 AT4G12020.2 55.914 93 35 2 41 133 295 381 1.05e-21 103
MsaG030043 AT4G12020.4 55.914 93 35 2 41 133 295 381 1.06e-21 103
MsaG030043 AT4G12020.5 55.914 93 35 2 41 133 228 314 1.08e-21 103
MsaG030043 AT5G15040.1 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MsaG030043 AT5G15040.3 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MsaG030043 AT5G15040.2 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MsaG030043 AT1G24210.1 32.544 169 92 3 48 215 3 150 1.32e-19 87.4
MsaG030043 AT1G27260.1 32.500 160 84 2 48 206 82 218 9.86e-18 84.3
MsaG030043 AT1G27260.1 30.128 156 101 2 57 206 1 154 9.59e-17 81.3
MsaG030043 AT1G27240.1 33.721 172 93 4 56 206 11 182 1.38e-17 82.8
MsaG030043 AT1G27220.1 48.750 80 41 0 47 126 2 81 1.03e-16 80.1
MsaG030043 AT1G27250.1 45.349 86 43 1 45 126 3 88 1.33e-15 75.5
MsaG030043 AT1G27270.1 33.766 154 78 3 56 208 110 240 8.95e-12 67.4

Find 286 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATGATTTACAAAATT+TGG 0.100558 6:+1761351 MsaT030043.1:CDS
TGTAAACATGTTCATCATTT+TGG 0.116960 6:-1759834 None:intergenic
AATCTCCATGCGACTTAAAA+AGG 0.189205 6:-1760041 None:intergenic
CTCAGAAACAAACCGAAATA+TGG 0.194221 6:+1766379 MsaT030043.1:intron
ACTTCATTCTTGTCAGATTT+TGG 0.196682 6:-1763963 None:intergenic
TAGTAGAGATGATCATTTAA+TGG 0.245705 6:+1764076 MsaT030043.1:CDS
GTTCAGATTTCAATAAAGTT+TGG 0.277896 6:+1763357 MsaT030043.1:CDS
GAAGATGTCAAAGTAGTTAA+TGG 0.280275 6:+1766439 MsaT030043.1:CDS
CTTGAATTGGACTCTCTGTT+AGG 0.291590 6:-1763936 None:intergenic
GGAGTTAACGGAGGAGGAGG+TGG 0.295858 6:+1759281 MsaT030043.1:CDS
TGCAGTCTTCTAGTCCTTCT+CGG 0.296651 6:+1766056 MsaT030043.1:intron
ATCTTCAAACTTGGCATTCT+CGG 0.300196 6:-1765613 None:intergenic
CCTCAATGAGCGGGGTTCTA+TGG 0.314080 6:+1760152 MsaT030043.1:CDS
TTTATGCAGTTCTAAATCTA+AGG 0.316087 6:+1763207 MsaT030043.1:intron
GTCTGTCCTCCCTGGCAAAA+AGG 0.316087 6:+1766177 MsaT030043.1:CDS
GAGGCTCTGGAGTACCTTCT+TGG 0.321223 6:+1763800 MsaT030043.1:CDS
GATCATTTAATGGATAATAA+AGG 0.322545 6:+1764086 MsaT030043.1:CDS
GGAAGTGAAAGACATGTTTC+AGG 0.324751 6:+1759358 MsaT030043.1:CDS
TTAGAGCGTTGTGAAAATAT+TGG 0.331915 6:+1762132 MsaT030043.1:CDS
GTCTTTCACTTCCTTCAAAT+AGG 0.332619 6:-1759348 None:intergenic
TCTGCATCTGTCACAATTAG+AGG 0.333684 6:+1764188 MsaT030043.1:CDS
TTCAATCGAGTCAATATTAC+AGG 0.334568 6:-1763305 None:intergenic
GATGAATGTCGAGCAATTCT+TGG 0.338703 6:+1765633 MsaT030043.1:CDS
TCATCTAAGTCCCCATATTT+CGG 0.343556 6:-1766391 None:intergenic
TTCAGATTTCAATAAAGTTT+GGG 0.344404 6:+1763358 MsaT030043.1:CDS
CCCGGAGGTGGTGGTGGCGG+AGG 0.347061 6:+1759257 MsaT030043.1:CDS
GGAGGTGGTGGTGGCGGAGG+TGG 0.354735 6:+1759260 MsaT030043.1:CDS
ACCTCCGCCACCACCACCTC+CGG 0.358286 6:-1759258 None:intergenic
CTTCCTCCTCATGATCTTCC+CGG 0.362474 6:-1765009 None:intergenic
ATGATTTCTTTGTTCTCTTT+AGG 0.364298 6:+1765239 MsaT030043.1:CDS
AGGAAATACGAGTCTAGAAA+TGG 0.366851 6:+1764860 MsaT030043.1:CDS
CAAATAGGATAAAGCATCAT+TGG 0.368007 6:-1759333 None:intergenic
AGATCATGAGGAGGAAGATA+TGG 0.369226 6:+1765015 MsaT030043.1:CDS
ACGCCATTGGCCACTGGTAC+TGG 0.371625 6:-1764677 None:intergenic
CGCTGACTAGCAGTAGGAAT+TGG 0.371739 6:-1762698 None:intergenic
TTTGCAGACGGGTTCCTTGC+TGG 0.381199 6:+1762239 MsaT030043.1:intron
GGCCCCGGAGGTGGTGGTGG+CGG 0.384587 6:+1759254 MsaT030043.1:CDS
AGGTGCATTGAACGCCTATA+TGG 0.395051 6:+1763227 MsaT030043.1:CDS
TAAGGCACTTCAAGAATGTT+TGG 0.396241 6:-1761303 None:intergenic
AGTTAACGGAGGAGGAGGTG+GGG 0.396605 6:+1759283 MsaT030043.1:CDS
CCTCCTCAGAGTCAGCATTC+GGG 0.401332 6:-1764781 None:intergenic
CAAGGCCCCGGAGGTGGTGG+TGG 0.408020 6:+1759251 MsaT030043.1:CDS
CACTGGGTATCTGTGACTTC+CGG 0.410808 6:+1762752 MsaT030043.1:CDS
CAACAAGCGCTGAAATGAAA+TGG 0.414086 6:+1765394 MsaT030043.1:CDS
TCCTCCTCAGAGTCAGCATT+CGG 0.414742 6:-1764782 None:intergenic
CATCAAGTACATCAGCTTCT+CGG 0.416660 6:+1767261 MsaT030043.1:CDS
TCAGAAACAAACCGAAATAT+GGG 0.416743 6:+1766380 MsaT030043.1:intron
AGAAACAAGAGGAGTGGAAT+AGG 0.416915 6:+1763330 MsaT030043.1:CDS
GGTCAAGGCCCCGGAGGTGG+TGG 0.417779 6:+1759248 MsaT030043.1:CDS
TTGAATTGGACTCTCTGTTA+GGG 0.418625 6:-1763935 None:intergenic
TCAATAAAATTATGAGGCTC+TGG 0.422837 6:+1763787 MsaT030043.1:CDS
CAAACCACAATGACGATAGA+AGG 0.422917 6:+1764840 MsaT030043.1:CDS
GACGAGCACCGTCCAGAGGC+TGG 0.424663 6:+1764887 MsaT030043.1:CDS
AGCGTGAGAGCAGGGATAGA+AGG 0.425696 6:+1760396 MsaT030043.1:CDS
AGCAGAGGAAGCGTGAGAGC+AGG 0.426237 6:+1760387 MsaT030043.1:CDS
TACTTGCATTTGCCGCATCC+CGG 0.427003 6:-1760178 None:intergenic
TTGGCCACTGGTACTGGAGG+TGG 0.427920 6:-1764671 None:intergenic
AGAATTATCTGGTAAGAATC+TGG 0.428698 6:-1760079 None:intergenic
GATAAAGAAAACGGTTCTCT+TGG 0.429366 6:+1764041 MsaT030043.1:CDS
TCCACACAGCATGCTCCATT+TGG 0.429499 6:+1760111 MsaT030043.1:CDS
TATTGAATAACTCTTTACTT+TGG 0.429894 6:-1763770 None:intergenic
TTCTGCAATTTGTGCTGTAA+TGG 0.430468 6:+1766417 MsaT030043.1:CDS
TGATGCTTTATCCTATTTGA+AGG 0.431866 6:+1759337 MsaT030043.1:CDS
CATTCATATTGTCCATGAGC+TGG 0.432194 6:-1766087 None:intergenic
GAGAACTGTTTAACAAATCC+AGG 0.434098 6:-1764140 None:intergenic
CTCTGCTTCACCTTCACTCT+CGG 0.434724 6:-1765062 None:intergenic
GGTGGCGGAGGTGGAGTTAA+CGG 0.438397 6:+1759269 MsaT030043.1:CDS
ATCATTTAATGGATAATAAA+GGG 0.439339 6:+1764087 MsaT030043.1:CDS
TCGACATTCATCTTCAAACT+TGG 0.440486 6:-1765622 None:intergenic
TATGAAAAGTCTCGGAAACC+TGG 0.442004 6:+1765854 MsaT030043.1:CDS
CAGTTTCTGCGATAAAGTTA+AGG 0.442484 6:+1761255 MsaT030043.1:CDS
GTTCTATGGCACCCGGGATG+CGG 0.444112 6:+1760166 MsaT030043.1:CDS
GAGTTAACGGAGGAGGAGGT+GGG 0.447308 6:+1759282 MsaT030043.1:CDS
TCCGAGTGCTAATGTACCTT+TGG 0.447911 6:+1764439 MsaT030043.1:CDS
CACGATCATGAGAAGAAAAT+CGG 0.448821 6:-1760304 None:intergenic
GAGTGTTGAACGTCCTGATC+TGG 0.449508 6:+1760331 MsaT030043.1:CDS
TCTGACAAGAATGAAGTTGA+TGG 0.449745 6:+1763969 MsaT030043.1:CDS
TCATTATCACCTCCAGCCTC+TGG 0.449905 6:-1764899 None:intergenic
GCTAAGGTCAAGTTCTTGAA+TGG 0.450350 6:-1762535 None:intergenic
GAAAGAGTAATCCTCGCTTC+CGG 0.451243 6:-1762771 None:intergenic
TGAGGTCATGAAAGATTTCA+AGG 0.452200 6:+1759409 MsaT030043.1:CDS
GAGGATAACTTTGTTGCCTA+TGG 0.453692 6:+1764800 MsaT030043.1:CDS
TGCATTGAATTTCGACCAAA+TGG 0.453988 6:-1760126 None:intergenic
CGCAAGTACTGAATGATCAC+TGG 0.457151 6:+1762735 MsaT030043.1:CDS
GTTAACGGAGGAGGAGGTGG+GGG 0.458649 6:+1759284 MsaT030043.1:CDS
CAAGACCATGGTCACCATAT+AGG 0.459075 6:-1763241 None:intergenic
CCTTTCCGACTCATGCGATT+GGG 0.460266 6:-1763844 None:intergenic
CCCTTTCCGACTCATGCGAT+TGG 0.461152 6:-1763845 None:intergenic
AGCGAAAATGTTTCTGAAGC+TGG 0.461684 6:+1764944 MsaT030043.1:CDS
CCTCCGCCACCACCACCTCC+GGG 0.462154 6:-1759257 None:intergenic
ACTGAATCATTTAATTTCCC+AGG 0.462924 6:-1765872 None:intergenic
GAAGGTGCTGAAGAATTATC+TGG 0.464158 6:-1760090 None:intergenic
GGAAAGATTCCGCAAATTGA+TGG 0.464870 6:+1767301 MsaT030043.1:CDS
AGTTATTCAATAAAATTATG+AGG 0.465617 6:+1763781 MsaT030043.1:CDS
CATCAGCTTCTCGGTCTCGC+AGG 0.469915 6:+1767270 MsaT030043.1:CDS
TGTGATGCTGATGCACAAAC+TGG 0.470759 6:+1765091 MsaT030043.1:CDS
AACAGCAACAGCAGCAATCT+CGG 0.471061 6:-1766116 None:intergenic
GATGCACAAACTGGAGTAGA+TGG 0.473082 6:+1765100 MsaT030043.1:CDS
AACATGATCTTGATAACAGC+AGG 0.473114 6:+1760441 MsaT030043.1:CDS
AGTGTTATCTCATATCCCTT+TGG 0.473567 6:-1759629 None:intergenic
TTTCTGATGTAGGTTTGAGC+TGG 0.475066 6:+1762965 MsaT030043.1:intron
CGAAGCTCCTCCGAAGAAAA+CGG 0.475667 6:+1759667 MsaT030043.1:CDS
GGAAATACGAGTCTAGAAAT+GGG 0.477628 6:+1764861 MsaT030043.1:CDS
ACCTTCTTGGAACCGATGCT+TGG 0.481962 6:+1763813 MsaT030043.1:CDS
GAGTGCTAATGTACCTTTGG+TGG 0.483221 6:+1764442 MsaT030043.1:CDS
GACATCAGCATCAGTAGGTC+GGG 0.485289 6:-1764390 None:intergenic
AATGCAGCGCCTCAATGAGC+GGG 0.486636 6:+1760143 MsaT030043.1:CDS
CTTGCCAGATTCTTTATGAA+AGG 0.488681 6:+1765349 MsaT030043.1:intron
ATGTTCTCTGTCCTCCAACT+TGG 0.490073 6:-1762451 None:intergenic
TGGTGTCATAGCAAGGGTTA+AGG 0.492194 6:+1759556 MsaT030043.1:CDS
TGTCAAAGTAGTTAATGGAT+TGG 0.492576 6:+1766444 MsaT030043.1:CDS
TTCATTTGTTGAAGATGTGA+AGG 0.494932 6:+1765192 MsaT030043.1:CDS
TTATCTCATATCCCTTTGGC+AGG 0.495574 6:-1759625 None:intergenic
TCGGCTCTCGATCCAGCTCA+TGG 0.496091 6:+1766075 MsaT030043.1:CDS
AGGGCTGAGGACAGGAAAGC+AGG 0.496502 6:+1763864 MsaT030043.1:CDS
CTGCTGGTGATGAATGCTCC+CGG 0.497940 6:+1764990 MsaT030043.1:CDS
CTTCCATCACCTCCTACGTT+AGG 0.499594 6:-1763912 None:intergenic
TTTCAGGTGACCGATTTGCT+TGG 0.499956 6:+1762072 MsaT030043.1:intron
GCAGAGGAAGCGTGAGAGCA+GGG 0.504129 6:+1760388 MsaT030043.1:CDS
CTAACAGAGAGTCCAATTCA+AGG 0.504818 6:+1763937 MsaT030043.1:CDS
TTGAAGATGTGAAGGATTCA+AGG 0.505444 6:+1765200 MsaT030043.1:CDS
ACTTGCATTTGCCGCATCCC+GGG 0.505886 6:-1760177 None:intergenic
AAAGAAAACGGTTCTCTTGG+TGG 0.506625 6:+1764044 MsaT030043.1:CDS
AATAACGAACAAGTTTATAC+AGG 0.511876 6:-1763731 None:intergenic
TACATTAGCACTCGGAGACT+TGG 0.511993 6:-1764432 None:intergenic
TAAAGAGAAGCAGCAGAAAG+AGG 0.512413 6:+1763617 MsaT030043.1:CDS
TATGGTCAAGGCCCCGGAGG+TGG 0.512978 6:+1759245 MsaT030043.1:CDS
TTAGAGCCACTTGCTGCTGA+TGG 0.513114 6:+1762411 MsaT030043.1:intron
GTTTCCAGGACTGACACTAC+TGG 0.514491 6:+1759536 MsaT030043.1:intron
AATATATAAATTAATCAGAC+AGG 0.514617 6:+1765692 MsaT030043.1:CDS
GCTGCCAATGATAAAGAAAA+CGG 0.515018 6:+1764032 MsaT030043.1:CDS
CCATGAATTTACAGTTTAGG+TGG 0.516414 6:-1767330 None:intergenic
TTACAGGCAGAGCATGAGTT+GGG 0.517425 6:-1763289 None:intergenic
GCTGCTCATGATGATAAAGA+TGG 0.518148 6:+1760530 MsaT030043.1:CDS
AATGAAGTTGATGGTAGAGT+AGG 0.518384 6:+1763978 MsaT030043.1:CDS
GACAGAAACCTCTCTGATAA+CGG 0.520965 6:-1765133 None:intergenic
TAAAGATATGGTCAAGGCCC+CGG 0.522247 6:+1759239 MsaT030043.1:intron
TTTAACACTTTCCTGCCAAA+GGG 0.523436 6:+1759614 MsaT030043.1:CDS
GGTGGAGTTAACGGAGGAGG+AGG 0.526833 6:+1759278 MsaT030043.1:CDS
GAAAGCAGTGATAAAGCCCC+TGG 0.527581 6:+1764122 MsaT030043.1:CDS
GCTAGTCAGCGATCTGAGCT+TGG 0.528684 6:+1762710 MsaT030043.1:CDS
AAGGACCTACAGATTGAAAC+CGG 0.529512 6:-1765940 None:intergenic
AGAATGCTTTCCAAGCAAAT+CGG 0.530128 6:-1762082 None:intergenic
TGTTCAGATGTGAAGATGAC+AGG 0.530892 6:+1762828 MsaT030043.1:CDS
GGAGGTGGAGTTAACGGAGG+AGG 0.532963 6:+1759275 MsaT030043.1:CDS
CATTGGCAGCTACACTAGTC+CGG 0.534099 6:-1764019 None:intergenic
ACAGCAACAGCAGCAATCTC+GGG 0.534699 6:-1766115 None:intergenic
AGTCGGAAAGGGCTGAGGAC+AGG 0.535860 6:+1763856 MsaT030043.1:CDS
CTGTGCATTTGAATCTCCAT+AGG 0.536629 6:-1764816 None:intergenic
AAGCTTAGCGTCTTCCTCAT+CGG 0.537190 6:-1765816 None:intergenic
ACACTACTGGTGTCATAGCA+AGG 0.537234 6:+1759549 MsaT030043.1:CDS
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6:+1758526 None:intergenic
ACTAACACGCCATTGGCCAC+TGG 0.538334 6:-1764683 None:intergenic
TTCCTCCTCATGATCTTCCC+GGG 0.538480 6:-1765008 None:intergenic
CGAGAGTGAAGGTGAAGCAG+AGG 0.539112 6:+1765063 MsaT030043.1:CDS
ATCGTTCAGACTATTGCTGC+AGG 0.539751 6:+1763645 MsaT030043.1:CDS
ATGGAACATGATGATGTTGA+TGG 0.540343 6:+1765034 MsaT030043.1:CDS
TGGAGGACGCCATCAATTTG+CGG 0.540685 6:-1767310 None:intergenic
ACTCTTTCAAACATATGCGC+AGG 0.541044 6:+1762786 MsaT030043.1:CDS
ATCACGATCATCCAAGTTGG+AGG 0.541515 6:+1762440 MsaT030043.1:CDS
GTTCTCAACTAACACGCCAT+TGG 0.541755 6:-1764690 None:intergenic
AGCTGGATCGAGAGCCGAGA+AGG 0.542987 6:-1766070 None:intergenic
TGAAATCTTTCATGACCTCA+AGG 0.544794 6:-1759406 None:intergenic
GCGGCAAATGCAAGTAGATA+AGG 0.545427 6:+1760185 MsaT030043.1:CDS
CCCAATCGCATGAGTCGGAA+AGG 0.547446 6:+1763844 MsaT030043.1:CDS
GCGTGAGAGCAGGGATAGAA+GGG 0.547489 6:+1760397 MsaT030043.1:CDS
ATTTAACACTTTCCTGCCAA+AGG 0.547821 6:+1759613 MsaT030043.1:CDS
CAGTGAAGTGATCTTCAATA+CGG 0.549092 6:-1763082 None:intergenic
GTCTTATGTGCTATTCACAT+TGG 0.549324 6:+1765662 MsaT030043.1:CDS
TTTATCACGATCATCCAAGT+TGG 0.549919 6:+1762437 MsaT030043.1:CDS
GCCGGTAGAAGTCGGTAGCT+CGG 0.551433 6:-1762576 None:intergenic
GCACCTAACGTAGGAGGTGA+TGG 0.551899 6:+1763909 MsaT030043.1:CDS
AAGATACAAGGAGAAGTACA+TGG 0.552134 6:+1762506 MsaT030043.1:CDS
AACTCGAAATGTGGAATGAG+AGG 0.553226 6:-1763678 None:intergenic
CACTGGTACTGGAGGTGGAG+CGG 0.553326 6:-1764666 None:intergenic
CGTATTGAAGATCACTTCAC+TGG 0.555491 6:+1763083 MsaT030043.1:CDS
ATTACAGGCAGAGCATGAGT+TGG 0.556003 6:-1763290 None:intergenic
GCATTGTATAATTTGCTCGA+TGG 0.557862 6:+1765585 MsaT030043.1:CDS
CGACCCTTTGCTTCATCACG+TGG 0.558667 6:+1758590 MsaT030043.1:CDS
GAACATAGGCGTGAGACGGA+TGG 0.558726 6:+1762468 MsaT030043.1:CDS
ATTTCCTTCTATCGTCATTG+TGG 0.560313 6:-1764844 None:intergenic
GCATGAGTCGGAAAGGGCTG+AGG 0.562256 6:+1763851 MsaT030043.1:CDS
GAAAAGTCAAACTCGAAATG+TGG 0.564709 6:-1763687 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6:+1758525 None:intergenic
TCTCGCTGCTTGTTCATCAG+AGG 0.565468 6:-1764162 None:intergenic
GACGGATGGAGGTAAAGAGA+AGG 0.565586 6:+1762482 MsaT030043.1:CDS
TGCTAATGTACCTTTGGTGG+AGG 0.568531 6:+1764445 MsaT030043.1:CDS
GAGCGGGGTTCTATGGCACC+CGG 0.569077 6:+1760159 MsaT030043.1:CDS
AGCAGTGTGCATATGTCCCC+AGG 0.569312 6:+1764215 MsaT030043.1:CDS
CCAATCGCATGAGTCGGAAA+GGG 0.570311 6:+1763845 MsaT030043.1:CDS
TACAGGATGTACCTTGCGTA+AGG 0.570569 6:-1765444 None:intergenic
TCAGCATCAGTAGGTCGGGT+TGG 0.570850 6:-1764386 None:intergenic
GAGAGTGAAGGTGAAGCAGA+GGG 0.572305 6:+1765064 MsaT030043.1:CDS
ATCACCACGTGATGAAGCAA+AGG 0.572307 6:-1758594 None:intergenic
AGACATCAGCATCAGTAGGT+CGG 0.572882 6:-1764391 None:intergenic
TATACGAGTATGAAAAGTCT+CGG 0.573722 6:+1765846 MsaT030043.1:CDS
TGAATTTACAGTTTAGGTGG+AGG 0.574319 6:-1767327 None:intergenic
TGAAAGTTACGTACATCGGC+CGG 0.575323 6:-1762594 None:intergenic
AACAACGTTTGCAGTCGCTA+AGG 0.575680 6:-1762551 None:intergenic
TGTTGAAAATAAGATTAGTG+TGG 0.575761 6:+1763049 MsaT030043.1:CDS
CGCTCCACCTCCAGTACCAG+TGG 0.577034 6:+1764667 MsaT030043.1:CDS
TCCGAGCTACCGACTTCTAC+CGG 0.577448 6:+1762575 MsaT030043.1:CDS
TGCTGGTGATGAATGCTCCC+GGG 0.577683 6:+1764991 MsaT030043.1:CDS
TAAAGAGAAGGAAAGATACA+AGG 0.578798 6:+1762494 MsaT030043.1:CDS
GGTATATGTTCTCCTCATGA+AGG 0.581471 6:-1765919 None:intergenic
ATCTGTGACTTCCGGAAGCG+AGG 0.588696 6:+1762760 MsaT030043.1:CDS
CATCTTTACCGTTATCAGAG+AGG 0.590079 6:+1765125 MsaT030043.1:CDS
TTCATGAGGAGAACATATAC+CGG 0.591256 6:+1765921 MsaT030043.1:CDS
GCAGATACATGCTTTGTGAG+AGG 0.591857 6:-1765166 None:intergenic
ACCAAGCATCGGTTCCAAGA+AGG 0.594776 6:-1763814 None:intergenic
TCGGTCTCGCAGGGAAAGAG+AGG 0.595406 6:+1767280 MsaT030043.1:CDS
CAATGCAGCGCCTCAATGAG+CGG 0.595730 6:+1760142 MsaT030043.1:CDS
CCATAGAACCCCGCTCATTG+AGG 0.596542 6:-1760152 None:intergenic
TCAGATCGCTGACTAGCAGT+AGG 0.596565 6:-1762704 None:intergenic
ATGTGAATAGCACATAAGAC+TGG 0.597599 6:-1765659 None:intergenic
CCTCCAGTACCAGTGGCCAA+TGG 0.597633 6:+1764674 MsaT030043.1:CDS
GAAGCTGGTGAAGATGTGTC+AGG 0.597921 6:+1764959 MsaT030043.1:CDS
GATAACACTTGATGAGGATG+AGG 0.597977 6:+1759643 MsaT030043.1:CDS
TGTGTATAAAGATATGGTCA+AGG 0.598429 6:+1759233 MsaT030043.1:intron
ATGAAAAGTCTCGGAAACCT+GGG 0.598934 6:+1765855 MsaT030043.1:CDS
CTCCTCAGAGTCAGCATTCG+GGG 0.599631 6:-1764780 None:intergenic
ATCAGCTTCTCGGTCTCGCA+GGG 0.600655 6:+1767271 MsaT030043.1:CDS
GTACATCGGCCGGTAGAAGT+CGG 0.605281 6:-1762584 None:intergenic
TGAAGCAGAAACAAGAGGAG+TGG 0.606159 6:+1763324 MsaT030043.1:CDS
AACTTCCCAATCGCATGAGT+CGG 0.608820 6:+1763839 MsaT030043.1:CDS
GATGTACTTGATGATGATGA+TGG 0.609778 6:-1767251 None:intergenic
AGGGTTAAGGAACTATTCAA+AGG 0.610387 6:+1759569 MsaT030043.1:CDS
AAAATATGACATGTTCCTTG+AGG 0.610450 6:+1759391 MsaT030043.1:CDS
ATAGAGACATCAGCATCAGT+AGG 0.611342 6:-1764395 None:intergenic
TGGGAAGTTACACCAAGCAT+CGG 0.611514 6:-1763825 None:intergenic
TATCACCTCCAGCCTCTGGA+CGG 0.613337 6:-1764895 None:intergenic
GATATCTTGCAACTCATCCA+AGG 0.615932 6:+1766474 MsaT030043.1:CDS
ACTTGTTCGTTATTCATGTG+AGG 0.618582 6:+1763740 MsaT030043.1:CDS
CAGAGAACATAGGCGTGAGA+CGG 0.618824 6:+1762464 MsaT030043.1:CDS
AAATGACCATCAGCAGCAAG+TGG 0.621642 6:-1762417 None:intergenic
AATGGAGCATGCTGTGTGGA+AGG 0.623233 6:-1760108 None:intergenic
TCACCACGTGATGAAGCAAA+GGG 0.623273 6:-1758593 None:intergenic
GGAGGACGAGCACCGTCCAG+AGG 0.623885 6:+1764883 MsaT030043.1:CDS
AGAACTGTTTAACAAATCCA+GGG 0.625745 6:-1764139 None:intergenic
CACTACTGGTGTCATAGCAA+GGG 0.626400 6:+1759550 MsaT030043.1:CDS
ACCAAAGGTACATTAGCACT+CGG 0.627066 6:-1764440 None:intergenic
TCTGTTGCACCTAACGTAGG+AGG 0.627975 6:+1763903 MsaT030043.1:CDS
TTCAAACTTGGCATTCTCGG+CGG 0.628512 6:-1765610 None:intergenic
TCGATTGAAGCAGAAACAAG+AGG 0.630186 6:+1763319 MsaT030043.1:CDS
CTCCGCCACCACCACCTCCG+GGG 0.631309 6:-1759256 None:intergenic
TGCACATGTTATCCTTCATG+AGG 0.631484 6:+1765907 MsaT030043.1:CDS
TTCTGATGCTGAAATTCACG+AGG 0.632331 6:+1763707 MsaT030043.1:CDS
CCCGAATGCTGACTCTGAGG+AGG 0.632506 6:+1764781 MsaT030043.1:CDS
ATATGAGATAACACTTGATG+AGG 0.638086 6:+1759637 MsaT030043.1:CDS
ATGCTCCCGGGAAGATCATG+AGG 0.641352 6:+1765003 MsaT030043.1:CDS
GTGTCAGGAAGTGAGTCTGC+TGG 0.641941 6:+1764974 MsaT030043.1:CDS
CTCACTATAAACCTCAGTGA+TGG 0.642207 6:-1759902 None:intergenic
CCATTGGCCACTGGTACTGG+AGG 0.644559 6:-1764674 None:intergenic
CATCACTGAGGTTTATAGTG+AGG 0.647512 6:+1759903 MsaT030043.1:CDS
CATAGGCGTGAGACGGATGG+AGG 0.647806 6:+1762471 MsaT030043.1:CDS
GGAGAAGTTGAGCAGCGCTG+AGG 0.647893 6:+1761276 MsaT030043.1:CDS
GAAACTCATACCTCCACCAA+AGG 0.649483 6:-1764455 None:intergenic
TGAAGATGTGAAGGATTCAA+GGG 0.650035 6:+1765201 MsaT030043.1:CDS
AGCGGGGTTCTATGGCACCC+GGG 0.656076 6:+1760160 MsaT030043.1:CDS
ATCCCCGAATGCTGACTCTG+AGG 0.661035 6:+1764778 MsaT030043.1:CDS
GCAAGTACTGAATGATCACT+GGG 0.663594 6:+1762736 MsaT030043.1:CDS
CAGAAACAAACCGAAATATG+GGG 0.665228 6:+1766381 MsaT030043.1:intron
CTCGTCAGCTCGTTTAGCAG+CGG 0.666549 6:-1763012 None:intergenic
AGATACAAGGAGAAGTACAT+GGG 0.666573 6:+1762507 MsaT030043.1:CDS
GATGGTAAAGCCGAGAGTGA+AGG 0.667991 6:+1765052 MsaT030043.1:CDS
GAAATACGAGTCTAGAAATG+GGG 0.668085 6:+1764862 MsaT030043.1:CDS
GTTCTACAGATCCTTACGCA+AGG 0.668821 6:+1765433 MsaT030043.1:CDS
AGTTGGAGGACAGAGAACAT+AGG 0.668867 6:+1762454 MsaT030043.1:CDS
GAACGCCTATATGGTGACCA+TGG 0.669220 6:+1763236 MsaT030043.1:CDS
CTCCCGGGAAGATCATGAGG+AGG 0.670660 6:+1765006 MsaT030043.1:CDS
ATACGAGTCTAGAAATGGGG+AGG 0.677243 6:+1764865 MsaT030043.1:CDS
TCAAACTGTTGCAACCGATG+AGG 0.677271 6:+1765802 MsaT030043.1:CDS
TGAACTTTCACAAAGAGCAG+AGG 0.678988 6:+1760372 MsaT030043.1:CDS
TGTCTAAGACATCAAGACCA+TGG 0.679362 6:-1763253 None:intergenic
ATGCAGCGCCTCAATGAGCG+GGG 0.680696 6:+1760144 MsaT030043.1:CDS
GAACTGTTTAACAAATCCAG+GGG 0.690057 6:-1764138 None:intergenic
GGCGGAGGTGGAGTTAACGG+AGG 0.690346 6:+1759272 MsaT030043.1:CDS
AGTTCTGTTGCACCTAACGT+AGG 0.693937 6:+1763900 MsaT030043.1:CDS
ACATGATCTTGATAACAGCA+GGG 0.695132 6:+1760442 MsaT030043.1:CDS
AGAGTGAAGGTGAAGCAGAG+GGG 0.699362 6:+1765065 MsaT030043.1:CDS
ACCAAATGGAGCATGCTGTG+TGG 0.702132 6:-1760112 None:intergenic
GAGCACCGTCCAGAGGCTGG+AGG 0.711256 6:+1764890 MsaT030043.1:CDS
CTTTCCAGTAAAATGCCGTG+AGG 0.738774 6:-1766202 None:intergenic
GTCGGGTTGGAGTAAGTACG+CGG 0.743399 6:-1764373 None:intergenic
AGATATGGTCAAGGCCCCGG+AGG 0.748835 6:+1759242 MsaT030043.1:intron
AGAGCACAAGACCATCACTG+AGG 0.814963 6:+1759891 MsaT030043.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 1758539 1767337 1758539 ID=MsaG030043
Chr6 mRNA 1758539 1767337 1758539 ID=MsaT030043.1;Parent=MsaG030043
Chr6 exon 1758539 1758618 1758539 ID=MsaT030043.1.exon1;Parent=MsaT030043.1
Chr6 CDS 1758539 1758618 1758539 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1759244 1759438 1759244 ID=MsaT030043.1.exon2;Parent=MsaT030043.1
Chr6 CDS 1759244 1759438 1759244 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1759544 1759730 1759544 ID=MsaT030043.1.exon3;Parent=MsaT030043.1
Chr6 CDS 1759544 1759730 1759544 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1759826 1759924 1759826 ID=MsaT030043.1.exon4;Parent=MsaT030043.1
Chr6 CDS 1759826 1759924 1759826 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1760033 1760206 1760033 ID=MsaT030043.1.exon5;Parent=MsaT030043.1
Chr6 CDS 1760033 1760206 1760033 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1760287 1760560 1760287 ID=MsaT030043.1.exon6;Parent=MsaT030043.1
Chr6 CDS 1760287 1760560 1760287 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1761236 1761372 1761236 ID=MsaT030043.1.exon7;Parent=MsaT030043.1
Chr6 CDS 1761236 1761372 1761236 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1762078 1762153 1762078 ID=MsaT030043.1.exon8;Parent=MsaT030043.1
Chr6 CDS 1762078 1762153 1762078 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1762246 1762275 1762246 ID=MsaT030043.1.exon9;Parent=MsaT030043.1
Chr6 CDS 1762246 1762275 1762246 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1762415 1762602 1762415 ID=MsaT030043.1.exon10;Parent=MsaT030043.1
Chr6 CDS 1762415 1762602 1762415 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1762695 1762849 1762695 ID=MsaT030043.1.exon11;Parent=MsaT030043.1
Chr6 CDS 1762695 1762849 1762695 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1762977 1763104 1762977 ID=MsaT030043.1.exon12;Parent=MsaT030043.1
Chr6 CDS 1762977 1763104 1762977 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1763216 1763470 1763216 ID=MsaT030043.1.exon13;Parent=MsaT030043.1
Chr6 CDS 1763216 1763470 1763216 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1763592 1764236 1763592 ID=MsaT030043.1.exon14;Parent=MsaT030043.1
Chr6 CDS 1763592 1764236 1763592 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1764372 1764466 1764372 ID=MsaT030043.1.exon15;Parent=MsaT030043.1
Chr6 CDS 1764372 1764466 1764372 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1764659 1765270 1764659 ID=MsaT030043.1.exon16;Parent=MsaT030043.1
Chr6 CDS 1764659 1765270 1764659 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1765357 1765454 1765357 ID=MsaT030043.1.exon17;Parent=MsaT030043.1
Chr6 CDS 1765357 1765454 1765357 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1765575 1765713 1765575 ID=MsaT030043.1.exon18;Parent=MsaT030043.1
Chr6 CDS 1765575 1765713 1765575 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1765800 1765952 1765800 ID=MsaT030043.1.exon19;Parent=MsaT030043.1
Chr6 CDS 1765800 1765952 1765800 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1766061 1766224 1766061 ID=MsaT030043.1.exon20;Parent=MsaT030043.1
Chr6 CDS 1766061 1766224 1766061 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1766384 1766495 1766384 ID=MsaT030043.1.exon21;Parent=MsaT030043.1
Chr6 CDS 1766384 1766495 1766384 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Chr6 exon 1767191 1767337 1767191 ID=MsaT030043.1.exon22;Parent=MsaT030043.1
Chr6 CDS 1767191 1767337 1767191 ID=cds.MsaT030043.1;Parent=MsaT030043.1
Gene Sequence

>MsaT030043.1

ATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTTTGCTTCATCACGTGGTGATTCATATGGTCAAGGCCCCGGAGGTGGTGGTGGCGGAGGTGGAGTTAACGGAGGAGGAGGTGGGGGAGCAACTACCTCCCAAAAATTGACAACCAATGATGCTTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAAAAAGAAAAATATGACATGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAAAAGACTGACACTACTGGTGTCATAGCAAGGGTTAAGGAACTATTCAAAGGTCACAACCATTTGATTTTTGGATTTAACACTTTCCTGCCAAAGGGATATGAGATAACACTTGATGAGGATGAGGACGAAGCTCCTCCGAAGAAAACGGTTGAATTTGAAGAAGCTATTAGTTTTGTGAACAAGATAAAGAAACGTTTCCAAAATGATGAACATGTTTACAAATCATTTTTGGACATTTTGAATATGTATCGCAAAGAGCACAAGACCATCACTGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGTCGCATGGAGATTTGCTCGATGAGTTCACCAGATTCTTACCAGATAATTCTTCAGCACCTTCCACACAGCATGCTCCATTTGGTCGAAATTCAATGCAGCGCCTCAATGAGCGGGGTTCTATGGCACCCGGGATGCGGCAAATGCAAGTAGATAAGCAACGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGAGTGTTGAACGTCCTGATCTGGATGATGACAAAACAATGATGAACTTTCACAAAGAGCAGAGGAAGCGTGAGAGCAGGGATAGAAGGGTGCGCGATCACGATGATAGAGAACATGATCTTGATAACAGCAGGGATTTGCACTCACAACGCTTTCCTGACAAAAAGAAATCTGTTAAGAAGACTGAAGCTTATGACTTTGCTGCTCATGATGATAAAGATGGAATGAAGCTCATGTATAGTCAAGCAATCAGTTTCTGCGATAAAGTTAAGGAGAAGTTGAGCAGCGCTGAGGACTACCAAACATTCTTGAAGTGCCTTAATATTTTTGGCAACGGAATTATAAAAAAGAATGATTTACAAAATTTGGTGACCGATTTGCTTGGAAAGCATTCTGATCTAATGAGCGAATTCAATGATTTCTTAGAGCGTTGTGAAAATATTGACGGGTTCCTTGCTGGTGTCATGAGTAAAAAGCCACTTGCTGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAGAGAACATAGGCGTGAGACGGATGGAGGTAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGACTTCTACCGGCCGATTATCCAATTCCTACTGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCCGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTTTGAGCTGGACATGTTATTAGAGTCTGTAAGTTCCGCTGCTAAACGAGCTGACGAGTTGTACAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGTTCTAAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCGAAGAACTTGAGCACAAAATCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATCGTTCAGACTATTGCTGCAGGAGCAAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAATCGCATGAGTCGGAAAGGGCTGAGGACAGGAAAGCAGGACACAACGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCTAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGGTGAAGTTAAAAATGGTCACCGGACTAGTGTAGCTGCCAATGATAAAGAAAACGGTTCTCTTGGTGGCGAGCTTGTTAGTAGAGATGATCATTTAATGGATAATAAAGGGCAGAAAAGTGTTGAAAGCAGTGATAAAGCCCCTGGATTTGTTAAACAGTTCTCCTCTGATGAACAAGCAGCGAGAAACTCTGCATCTGTCACAATTAGAGGCGAAAGCAGTGTGCATATGTCCCCAGGCCGCGTACTTACTCCAACCCGACCTACTGATGCTGATGTCTCTATTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTGGAGGGCGTTGCCGCTCCACCTCCAGTACCAGTGGCCAATGGCGTGTTAGTTGAGAACAGTAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCGAATGCTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGCACAGTCAAACCACAATGACGATAGAAGGAAATACGAGTCTAGAAATGGGGAGGACGAGCACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGAAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGATGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCGTTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAATGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGATTTATGGATGCATTGTATAATTTGCTCGATGGATCCGCCGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGCTTCAAACTGTTGCAACCGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTTCTTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCCGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCACGGCATTTTACTGGAAAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTTAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGATTTCTTATGTTCTCGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCAAGTACATCAGCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTGATGGCGTCCTCCACCTAA
Protein sequence

>MsaT030043.1

MKRARDDIYSASASQFKRPFASSRGDSYGQGPGGGGGGGGVNGGGGGGATTSQKLTTNDALSYLKEVKDMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERGSMAPGMRQMQVDKQRYRRDRFSSHDRDMSVERPDLDDDKTMMNFHKEQRKRESRDRRVRDHDDREHDLDNSRDLHSQRFPDKKKSVKKTEAYDFAAHDDKDGMKLMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDREHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHESERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSLGGELVSRDDHLMDNKGQKSVESSDKAPGFVKQFSSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSIAVVIAKSPSANVPLVEGVAAPPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEMKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSTSASRSRREREERFRKLMASST*