Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG030138 | XP_013450825.2 | 89.428 | 2166 | 65 | 14 | 1 | 2005 | 1 | 2163 | 0.0 | 3895 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG030138 | sp|Q9SGH2|MBD9_ARATH | 41.545 | 2188 | 1036 | 47 | 27 | 2005 | 22 | 2175 | 0.0 | 1461 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG030138 | tr|A0A396H9D5|A0A396H9D5_MEDTR | 89.428 | 2166 | 65 | 14 | 1 | 2005 | 1 | 2163 | 0.0 | 3749 |
Gene ID | Type | Classification |
---|---|---|
MsaG030138 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG030138 | MtrunA17_Chr6g0451001 | 89.428 | 2166 | 65 | 14 | 1 | 2005 | 1 | 2163 | 0.0 | 3895 |
MsaG030138 | MtrunA17_Chr3g0125331 | 43.836 | 73 | 37 | 2 | 1213 | 1281 | 704 | 776 | 6.97e-12 | 70.9 |
MsaG030138 | MtrunA17_Chr3g0129871 | 41.818 | 55 | 32 | 0 | 1204 | 1258 | 13 | 67 | 6.05e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG030138 | AT3G01460.1 | 41.545 | 2188 | 1036 | 47 | 27 | 2005 | 22 | 2175 | 0.0 | 1461 |
Find 526 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTATAAACTTTCAAAATTC+TGG | 0.103334 | 6:-3071364 | None:intergenic |
CCGACTCATTAACAGCATTT+TGG | 0.127841 | 6:-3073278 | None:intergenic |
AACTCTTGAGATCTATATTT+TGG | 0.136879 | 6:-3073766 | None:intergenic |
GTCAGAGAAATTGGTCTTAT+TGG | 0.142468 | 6:+3074343 | MsaT030138.1:CDS |
CATCTATGGAATTCATATTT+TGG | 0.156392 | 6:-3073119 | None:intergenic |
CTCCCTGTTCGTCGATCTTT+TGG | 0.162411 | 6:+3073390 | MsaT030138.1:CDS |
GAAAGCAGTTGTTGCATTAT+TGG | 0.162858 | 6:+3070630 | MsaT030138.1:intron |
CGAACTTCCTCTGCAGTTTA+AGG | 0.168104 | 6:+3067173 | MsaT030138.1:CDS |
TGAATTTGTCCAAGAAATTT+TGG | 0.169683 | 6:+3067998 | MsaT030138.1:CDS |
GTGATTCTGGACCTATATTT+AGG | 0.189201 | 6:+3067337 | MsaT030138.1:CDS |
CATCAGACTCCTCTTCTTCT+AGG | 0.191574 | 6:-3069776 | None:intergenic |
TCCACAAAAGCTGCCAAATT+TGG | 0.194799 | 6:+3072871 | MsaT030138.1:CDS |
CCGTGGATTTGCCTGATTTA+TGG | 0.196805 | 6:-3074526 | None:intergenic |
GCCTCTCCAGGCTCAGAATT+TGG | 0.198805 | 6:-3068723 | None:intergenic |
GGACTTCTCTGTTCTTTCTT+TGG | 0.209256 | 6:+3067194 | MsaT030138.1:CDS |
CTCTCTGACCTTCATTGGTT+TGG | 0.216158 | 6:-3067443 | None:intergenic |
TTGCTGTGTGGTTCCCTTCC+TGG | 0.218858 | 6:+3068954 | MsaT030138.1:CDS |
CTAAGAACAATGGTTCTTTC+AGG | 0.221810 | 6:-3068446 | None:intergenic |
GACCTATATTTAGGATTAAA+AGG | 0.235660 | 6:+3067346 | MsaT030138.1:CDS |
TTGTGACAATGTACCAAATT+TGG | 0.240887 | 6:-3072884 | None:intergenic |
CATGTATCTTCAAAGTTAAA+TGG | 0.241980 | 6:-3074283 | None:intergenic |
TGATGAAATTGGTCAAATTT+TGG | 0.247640 | 6:+3067668 | MsaT030138.1:CDS |
GCTTACATAGATGGGATTTA+AGG | 0.256145 | 6:+3067817 | MsaT030138.1:CDS |
TGCAAGCATTGACCAACTTT+TGG | 0.257143 | 6:-3067731 | None:intergenic |
GGTGGTCCTGCGCCTCTTCC+TGG | 0.258264 | 6:+3062599 | MsaT030138.1:CDS |
CTTTGTCAATAGTAATTATA+AGG | 0.263896 | 6:+3066897 | MsaT030138.1:CDS |
ATTGAACCTACACTTCTCTT+TGG | 0.265512 | 6:-3073052 | None:intergenic |
AGCAATGTTCGTGTTGCTTT+TGG | 0.265569 | 6:+3071302 | MsaT030138.1:CDS |
AAATTCCAACAAATCATCTT+TGG | 0.284602 | 6:+3074583 | MsaT030138.1:CDS |
TAGAACCCATATGGCCTTCT+AGG | 0.287242 | 6:+3074000 | MsaT030138.1:CDS |
AAAGATTAATCTACTTGATA+TGG | 0.295276 | 6:+3074735 | MsaT030138.1:CDS |
GACTTCTCTGTTCTTTCTTT+GGG | 0.297129 | 6:+3067195 | MsaT030138.1:CDS |
GAAGCGGTTCCAAAATTTCT+TGG | 0.297423 | 6:-3068007 | None:intergenic |
AATGAAACGTCTCTTTCTTC+TGG | 0.302538 | 6:+3066799 | MsaT030138.1:CDS |
CCCTCATCCCAAGGGGCTTT+CGG | 0.302733 | 6:-3071583 | None:intergenic |
AACGATGATGAGGGGCTTCT+TGG | 0.304477 | 6:+3070834 | MsaT030138.1:CDS |
TGTTGGCATGATAAGATTAC+TGG | 0.305121 | 6:+3067282 | MsaT030138.1:CDS |
TCCAGCACTTGTGCCCATTC+AGG | 0.305542 | 6:-3069843 | None:intergenic |
ACAGAACGAACACAGCTTAC+TGG | 0.306532 | 6:+3071775 | MsaT030138.1:CDS |
AGTCTCTCTCTGACCTTCAT+TGG | 0.307882 | 6:-3067448 | None:intergenic |
AAGGAACTTGTCAGAGAAAT+TGG | 0.309836 | 6:+3074334 | MsaT030138.1:CDS |
GCCTGCAAAATTAACTCATT+TGG | 0.312194 | 6:-3066580 | None:intergenic |
AAGGATAACTATAAGATGTT+AGG | 0.314494 | 6:+3073577 | MsaT030138.1:CDS |
TTCTCTGACAAGTTCCTTGT+TGG | 0.317808 | 6:-3074329 | None:intergenic |
GCTCAAGCTGCTGTCGTATC+AGG | 0.318101 | 6:-3072760 | None:intergenic |
TCGGTCAATCTTGCCTTCTT+AGG | 0.319067 | 6:-3068178 | None:intergenic |
TTCAGAAATCGAGGAGCTAT+TGG | 0.319828 | 6:+3073684 | MsaT030138.1:CDS |
TTGTCAGTTAGCAAAGATTC+TGG | 0.322868 | 6:+3073514 | MsaT030138.1:CDS |
GTTTGACTTCCGGCTTCCTT+TGG | 0.324532 | 6:-3075386 | None:intergenic |
GGACAGTACCAGTTTCCTTC+AGG | 0.326619 | 6:-3071715 | None:intergenic |
TCTTCCTATGTCAGATGCTT+TGG | 0.326733 | 6:+3068618 | MsaT030138.1:CDS |
AGAAGGCAAAGTAGAGGATT+TGG | 0.326844 | 6:-3075230 | None:intergenic |
GAGTTAGGTGCTGTATTTCT+TGG | 0.327047 | 6:-3073841 | None:intergenic |
CATGAACACACCTTCTGATT+CGG | 0.327208 | 6:-3069899 | None:intergenic |
GGCCAAGTCAATTCATTAAT+CGG | 0.328366 | 6:-3068813 | None:intergenic |
AGATTGGCTTCTGGAGCTTA+TGG | 0.331956 | 6:+3070906 | MsaT030138.1:CDS |
TACAAAGGCCACTTCTTTGC+TGG | 0.334967 | 6:+3073870 | MsaT030138.1:CDS |
ATATATCTACGCGCTAGTTC+TGG | 0.335172 | 6:-3068834 | None:intergenic |
GTGAAATGGGCTTACATAGA+TGG | 0.336167 | 6:+3067808 | MsaT030138.1:CDS |
CTCTCAGTTAAACTTGAATT+AGG | 0.347947 | 6:-3075304 | None:intergenic |
TAGAAGGCCATATGGGTTCT+AGG | 0.348701 | 6:-3073998 | None:intergenic |
TCCTCAAAACCCACTCTAAC+AGG | 0.351908 | 6:-3066493 | None:intergenic |
GAAATACTTTACCACTTTCC+CGG | 0.352122 | 6:-3068908 | None:intergenic |
GTTGGCTTCCAAAGGGCATC+TGG | 0.352469 | 6:+3066457 | MsaT030138.1:CDS |
AAACTCCACATCGCTCAAAA+AGG | 0.352947 | 6:-3074048 | None:intergenic |
TAATTCAAGGTTTATATAGA+AGG | 0.355790 | 6:+3068155 | MsaT030138.1:CDS |
AGTCTTAAGCTGTCCATCTA+TGG | 0.356223 | 6:-3073133 | None:intergenic |
GTATAAACTTTCAAAATTCT+GGG | 0.356842 | 6:-3071363 | None:intergenic |
TATCTTGGCTTTCTTGTCAA+TGG | 0.358619 | 6:+3068854 | MsaT030138.1:CDS |
AACAATCCACGGTGAACTAT+TGG | 0.358762 | 6:-3073650 | None:intergenic |
CAAAGCTTCTAGCCATTGAT+TGG | 0.359559 | 6:-3066531 | None:intergenic |
TTGAACCTACACTTCTCTTT+GGG | 0.361395 | 6:-3073051 | None:intergenic |
GTATGAAGTAGCTAATTATC+TGG | 0.364658 | 6:+3066735 | MsaT030138.1:CDS |
ATAAAAGATGTTGGCGTTGC+TGG | 0.367768 | 6:+3074434 | MsaT030138.1:intron |
ATTGATCTAAGATTGGCTTC+TGG | 0.367873 | 6:+3070897 | MsaT030138.1:CDS |
CTTTCTTTGGGAAAAGTTGA+TGG | 0.367920 | 6:+3067207 | MsaT030138.1:CDS |
TCCTGAATGGGCACAAGTGC+TGG | 0.370033 | 6:+3069842 | MsaT030138.1:CDS |
TAAGTCCGGCGCCGGTGGTT+TGG | 0.372683 | 6:+3062649 | MsaT030138.1:CDS |
CATATGCATCAGAAGGATTA+AGG | 0.374868 | 6:+3067583 | MsaT030138.1:CDS |
AGAGGGCGGGCCACCATAGC+TGG | 0.377851 | 6:-3070861 | None:intergenic |
GTGTGTGGTGAGTGTTTAGC+GGG | 0.377980 | 6:+3062758 | MsaT030138.1:CDS |
CCGGACTATTGATCTAAGAT+TGG | 0.380315 | 6:+3070890 | MsaT030138.1:CDS |
TTCTCCCAAAGATGATTTGT+TGG | 0.380986 | 6:-3074588 | None:intergenic |
CCACCAATCCTAGTGGTCTT+GGG | 0.382515 | 6:+3072995 | MsaT030138.1:CDS |
AAACAGGAAAAGGAAGGAAT+TGG | 0.384022 | 6:+3075405 | MsaT030138.1:CDS |
GTGTACAAGGGCAATGCATC+TGG | 0.388911 | 6:+3069987 | MsaT030138.1:CDS |
TACCCAAAAGATCGACGAAC+AGG | 0.391354 | 6:-3073393 | None:intergenic |
TCCACCGTGATCACTGGTTT+CGG | 0.398513 | 6:-3075352 | None:intergenic |
TGGCCCGCCCTCTTGACTTC+CGG | 0.399001 | 6:+3070871 | MsaT030138.1:CDS |
TGGTTCTTCTGAAGCTCAAT+TGG | 0.399204 | 6:+3069803 | MsaT030138.1:CDS |
GTATTTCTTGGCAAACAAAC+AGG | 0.399535 | 6:-3073829 | None:intergenic |
GGTTCAATTCAATATAATAC+TGG | 0.400524 | 6:+3067615 | MsaT030138.1:CDS |
CTGTGGGTTATAAATCTTGT+TGG | 0.400718 | 6:+3067265 | MsaT030138.1:CDS |
GAGAGAGACTAATGATAGTA+TGG | 0.402024 | 6:+3067461 | MsaT030138.1:CDS |
AATCGGAAGCATATTGATCT+TGG | 0.402173 | 6:-3068796 | None:intergenic |
AATTCCAACAAATCATCTTT+GGG | 0.403575 | 6:+3074584 | MsaT030138.1:CDS |
CTCTCTGCATAAATTGTGTC+TGG | 0.404691 | 6:-3067909 | None:intergenic |
CGTCTTGTCCGAGCCTCTCC+AGG | 0.405617 | 6:-3068735 | None:intergenic |
GTTACCTGCGGCGGTGGAAT+CGG | 0.405682 | 6:-3062405 | None:intergenic |
AAAATGTAAAGCAGGACTTC+TGG | 0.407719 | 6:+3074088 | MsaT030138.1:CDS |
ACCGTCTGGCTACAATTCTA+TGG | 0.408954 | 6:+3066762 | MsaT030138.1:CDS |
TCACTACTAAGAGTGCTAAT+AGG | 0.410003 | 6:+3068666 | MsaT030138.1:CDS |
TCTTTGCTGGAAAAGAATTA+CGG | 0.410440 | 6:+3073883 | MsaT030138.1:CDS |
ACAAGTTAATTGTCTTTACT+TGG | 0.411724 | 6:+3071825 | MsaT030138.1:CDS |
CCACTGAAGAGCACCTTTGT+TGG | 0.413205 | 6:-3070011 | None:intergenic |
TTTGAGCGATGTGGAGTTTG+AGG | 0.414378 | 6:+3074052 | MsaT030138.1:CDS |
CTCAAATACTAGTAAATGTC+TGG | 0.415576 | 6:+3072954 | MsaT030138.1:CDS |
TTCACAAAGCCAGGTTTCTC+AGG | 0.416127 | 6:+3074472 | MsaT030138.1:CDS |
CAAGGATCCCTGAAGGAAAC+TGG | 0.418916 | 6:+3071707 | MsaT030138.1:CDS |
TAAACATGTTGAAAGTGAAA+TGG | 0.418967 | 6:+3067794 | MsaT030138.1:CDS |
CTTGTCAATGGACGGTAACC+TGG | 0.421425 | 6:+3068866 | MsaT030138.1:CDS |
CCAATGATGAAAAGTTGTAT+AGG | 0.422392 | 6:+3073967 | MsaT030138.1:CDS |
CAAAATATGAATTCCATAGA+TGG | 0.425955 | 6:+3073120 | MsaT030138.1:CDS |
ATTCCCCTGTCAGATTTCTC+AGG | 0.427786 | 6:-3068519 | None:intergenic |
GATTAAAAGGTGTTCATGTT+CGG | 0.430806 | 6:+3067359 | MsaT030138.1:CDS |
AAGAAAGTCTTCTAGAACTC+CGG | 0.431554 | 6:+3066843 | MsaT030138.1:CDS |
TACAAGCAATGTTTCCTAGA+AGG | 0.431759 | 6:-3074014 | None:intergenic |
AAAGCAGGACTTCTGGCGTT+AGG | 0.432096 | 6:+3074095 | MsaT030138.1:CDS |
GGCTAACGCATTAAGTGGTT+GGG | 0.432947 | 6:-3073629 | None:intergenic |
ATGGTTGACCCATCTGGAAT+AGG | 0.433263 | 6:-3067387 | None:intergenic |
TCAGAAATCGAGGAGCTATT+GGG | 0.434775 | 6:+3073685 | MsaT030138.1:CDS |
ATGTCAGAGCCAATCATTGA+TGG | 0.435077 | 6:-3066667 | None:intergenic |
AGGAAGAGGCGCAGGACCAC+CGG | 0.435115 | 6:-3062597 | None:intergenic |
GGAGTTCGTGGTGGAAGAAT+TGG | 0.435748 | 6:+3062713 | MsaT030138.1:CDS |
GCCTTTGTAACAAGAGAGTT+AGG | 0.436454 | 6:-3073856 | None:intergenic |
GACAGGCTTCAGATATTAAT+CGG | 0.436854 | 6:-3068575 | None:intergenic |
TAACTCTCCATGCTGAGAAT+GGG | 0.437899 | 6:-3067704 | None:intergenic |
AAAGTATTTCGTTGCTTAAG+AGG | 0.440046 | 6:+3068921 | MsaT030138.1:CDS |
TGGTTGGAGCAGGATAGATT+TGG | 0.440326 | 6:+3067966 | MsaT030138.1:CDS |
ATTCGGGTTCCCACATTTGT+TGG | 0.440715 | 6:-3069882 | None:intergenic |
GAGAGTTATTTCCCAAAAGT+TGG | 0.441057 | 6:+3067719 | MsaT030138.1:CDS |
GGACCACCGGGAGGAGGAGC+GGG | 0.442926 | 6:-3062584 | None:intergenic |
GAAGGATTAAGGCCAGTTGC+TGG | 0.443275 | 6:+3067594 | MsaT030138.1:CDS |
TTCTTGAGGCATATGATTTG+AGG | 0.443296 | 6:-3073211 | None:intergenic |
GTTCCCTTCCTGGTGTGGTT+GGG | 0.443556 | 6:+3068964 | MsaT030138.1:CDS |
TCACAGCTCCAGATGCCCTT+TGG | 0.444012 | 6:-3066465 | None:intergenic |
TCCTGTGGAACCTGATGGAC+AGG | 0.447709 | 6:-3068592 | None:intergenic |
TATTGAATTGAACCAGCAAC+TGG | 0.447810 | 6:-3067606 | None:intergenic |
CGATTGGGCAAGGAAAATAC+TGG | 0.448932 | 6:+3069944 | MsaT030138.1:CDS |
AAGGAAGCCGGAAGTCAAAC+AGG | 0.449256 | 6:+3075389 | MsaT030138.1:CDS |
GAAAGGATGGTTGACCCATC+TGG | 0.450128 | 6:-3067393 | None:intergenic |
CACTGAAGCACCAAATTGAT+TGG | 0.450357 | 6:-3066404 | None:intergenic |
ATGAACACACCTTCTGATTC+GGG | 0.450634 | 6:-3069898 | None:intergenic |
TGGCTAACGCATTAAGTGGT+TGG | 0.451140 | 6:-3073630 | None:intergenic |
ATATCTGAAGCCTGTCCATC+AGG | 0.452265 | 6:+3068582 | MsaT030138.1:CDS |
ATGTTTCCTAGAAGGCCATA+TGG | 0.454079 | 6:-3074006 | None:intergenic |
GTGGTTGTTGCGGCGGCGGA+AGG | 0.454858 | 6:-3062430 | None:intergenic |
ACCACCAATCCTAGTGGTCT+TGG | 0.455040 | 6:+3072994 | MsaT030138.1:CDS |
CATATTCAACCTTCAATAAC+GGG | 0.456122 | 6:+3066428 | MsaT030138.1:CDS |
CCTTCCTGGTGTGGTTGGGA+TGG | 0.456214 | 6:+3068968 | MsaT030138.1:CDS |
ATGTATCTTCAAAGTTAAAT+GGG | 0.456409 | 6:-3074282 | None:intergenic |
GGTTCCCTTCCTGGTGTGGT+TGG | 0.457274 | 6:+3068963 | MsaT030138.1:CDS |
AAGGTTCTAAAAGCATCATC+TGG | 0.458877 | 6:-3067506 | None:intergenic |
ATTTGAGGATGGAAAAGACT+TGG | 0.459158 | 6:-3073196 | None:intergenic |
AGAATTGGAGCGGCGAGTAT+AGG | 0.461015 | 6:+3062728 | MsaT030138.1:CDS |
AATTATCTGGGGCTACCGTC+TGG | 0.462972 | 6:+3066748 | MsaT030138.1:CDS |
ATCAATGGCTAGAAGCTTTG+AGG | 0.465332 | 6:+3066534 | MsaT030138.1:CDS |
GGCGCAGGACCACCGGGAGG+AGG | 0.465429 | 6:-3062590 | None:intergenic |
GCAATCGAAAGTGGCTGCTC+TGG | 0.465598 | 6:+3068695 | MsaT030138.1:CDS |
TAAAGAATGACTGGTGGTAC+TGG | 0.465835 | 6:+3075188 | MsaT030138.1:CDS |
TACTGTCCATCTTGTATTGG+TGG | 0.465873 | 6:+3071730 | MsaT030138.1:CDS |
ACTGAGAGATTCCATTATGC+TGG | 0.466320 | 6:+3073741 | MsaT030138.1:CDS |
TGGAGAGGCTCGGACAAGAC+GGG | 0.466479 | 6:+3068737 | MsaT030138.1:CDS |
CATACATAATGGCTGAATCA+AGG | 0.466878 | 6:-3075273 | None:intergenic |
GTAAAATTTGTGGCATCGAT+AGG | 0.467283 | 6:+3071611 | MsaT030138.1:CDS |
CCCCGCCTAGTGATGTTGAT+GGG | 0.467724 | 6:+3062846 | MsaT030138.1:CDS |
GAAAACCGATGTCCACCTCC+TGG | 0.467814 | 6:+3068211 | MsaT030138.1:CDS |
AAGGTTGTTACCTGCGGCGG+TGG | 0.470430 | 6:-3062411 | None:intergenic |
AGAAAAGAATCCGCCCGATT+GGG | 0.470485 | 6:+3069929 | MsaT030138.1:CDS |
TCATCTTCTGTTGGTGCACA+AGG | 0.470713 | 6:-3067525 | None:intergenic |
ACGATGTCGACGGTGAAGTC+AGG | 0.471202 | 6:-3062542 | None:intergenic |
AGTTAGCAAGGCAGTGTACA+AGG | 0.471485 | 6:+3069974 | MsaT030138.1:CDS |
ACGGGGAAGAAGGAAAGATA+TGG | 0.471607 | 6:+3068755 | MsaT030138.1:CDS |
TGCGCTGTTTGTTCTAAGTC+CGG | 0.471685 | 6:+3062635 | MsaT030138.1:CDS |
ATAACTCTCCATGCTGAGAA+TGG | 0.471961 | 6:-3067705 | None:intergenic |
TAAGACTGTTCCTGTGGCTG+TGG | 0.472016 | 6:+3073149 | MsaT030138.1:CDS |
GATCTTAGACCATCAATGAT+TGG | 0.472171 | 6:+3066658 | MsaT030138.1:CDS |
TATGAAGTAGCTAATTATCT+GGG | 0.472232 | 6:+3066736 | MsaT030138.1:CDS |
TATCAGGATGAAGTAATTCA+AGG | 0.472254 | 6:+3068142 | MsaT030138.1:intron |
GAGAAATCTGACAGGGGAAT+GGG | 0.472704 | 6:+3068522 | MsaT030138.1:CDS |
CACTGGGGAAGTTGGTCTTA+AGG | 0.473437 | 6:+3072912 | MsaT030138.1:CDS |
GAAGTGACACCGCCAGGAAG+AGG | 0.473868 | 6:-3062611 | None:intergenic |
TTGAGCGATGTGGAGTTTGA+GGG | 0.474560 | 6:+3074053 | MsaT030138.1:CDS |
TCCTCCTTGAGACCATTAGT+TGG | 0.475292 | 6:+3074685 | MsaT030138.1:CDS |
CTCGGACAAGACGGGGAAGA+AGG | 0.475810 | 6:+3068745 | MsaT030138.1:CDS |
ACATTGTCACAATGTACCAC+TGG | 0.478072 | 6:+3072895 | MsaT030138.1:CDS |
ATATGCCATGACCATAAATC+AGG | 0.478308 | 6:+3074515 | MsaT030138.1:CDS |
AACCACACTCCCGTTATTGA+AGG | 0.478540 | 6:-3066437 | None:intergenic |
TAATGCACACACTGAAGGTC+AGG | 0.479408 | 6:+3073792 | MsaT030138.1:CDS |
TTGGCAAACAAACAGGTCCT+TGG | 0.480182 | 6:-3073822 | None:intergenic |
TGATGGTAATATTCCTGAAT+GGG | 0.480250 | 6:+3069830 | MsaT030138.1:CDS |
TCTGCAAAACCATTGGCTGC+CGG | 0.480463 | 6:-3066862 | None:intergenic |
AATACGGAAGGCACAAAGGA+TGG | 0.482542 | 6:-3074379 | None:intergenic |
AAACATGTTGAAAGTGAAAT+GGG | 0.482573 | 6:+3067795 | MsaT030138.1:CDS |
AAGCAGGACTTCTGGCGTTA+GGG | 0.482734 | 6:+3074096 | MsaT030138.1:CDS |
ATCTGAAAGGCATGGTGTAC+TGG | 0.482745 | 6:+3066618 | MsaT030138.1:CDS |
GACAGTACCAGTTTCCTTCA+GGG | 0.482911 | 6:-3071714 | None:intergenic |
CTTAGAGAAGTGGTTGGAGC+AGG | 0.483078 | 6:+3067956 | MsaT030138.1:CDS |
GCCTGTCCATCAGGTTCCAC+AGG | 0.484332 | 6:+3068591 | MsaT030138.1:CDS |
CATGGAACATGTGAATGCTC+AGG | 0.484412 | 6:+3066942 | MsaT030138.1:CDS |
GCCGGAAGTCAAACAGGAAA+AGG | 0.484768 | 6:+3075395 | MsaT030138.1:CDS |
AAGATTGACCGAGTACGTTA+AGG | 0.485027 | 6:+3068189 | MsaT030138.1:CDS |
GCGCAGGAAGTGACACCGCC+AGG | 0.487448 | 6:-3062617 | None:intergenic |
AAGAAGAAGGTGAAGGTGAA+GGG | 0.487631 | 6:-3062502 | None:intergenic |
ATTGGTCTTATTGGTTCAGA+TGG | 0.487746 | 6:+3074352 | MsaT030138.1:CDS |
TAGTGAGATATTACGCTTGA+CGG | 0.488106 | 6:-3073325 | None:intergenic |
TTCAAAGTTAAATGGGCAAG+AGG | 0.488498 | 6:-3074275 | None:intergenic |
GCGTAATATCTCACTACTGC+AGG | 0.488535 | 6:+3073332 | MsaT030138.1:CDS |
CCCCATCAACATCACTAGGC+GGG | 0.489036 | 6:-3062847 | None:intergenic |
AGAAGAACATCTACTGATTG+AGG | 0.489114 | 6:-3074215 | None:intergenic |
TTTGAGGATGGAAAAGACTT+GGG | 0.489221 | 6:-3073195 | None:intergenic |
AGGATAACTATAAGATGTTA+GGG | 0.489368 | 6:+3073578 | MsaT030138.1:CDS |
GTGGATCCAAATTCTGAGCC+TGG | 0.489485 | 6:+3068717 | MsaT030138.1:CDS |
TCCCCGCCTAGTGATGTTGA+TGG | 0.490957 | 6:+3062845 | MsaT030138.1:CDS |
ATACGGAAGGCACAAAGGAT+GGG | 0.491135 | 6:-3074378 | None:intergenic |
TATAAGGATTGTTCTTCTGA+TGG | 0.491628 | 6:+3066913 | MsaT030138.1:CDS |
ACTAGCGCGTAGATATATCT+TGG | 0.491909 | 6:+3068839 | MsaT030138.1:CDS |
AATGAGTTCAGTAGGAGCTC+TGG | 0.492551 | 6:-3068248 | None:intergenic |
TTCAATAACGGGAGTGTGGT+TGG | 0.492563 | 6:+3066439 | MsaT030138.1:CDS |
GGAAGAGGCGCAGGACCACC+GGG | 0.493728 | 6:-3062596 | None:intergenic |
TGAGAAATCTGACAGGGGAA+TGG | 0.494095 | 6:+3068521 | MsaT030138.1:CDS |
TCTGCATCCACCGTGATCAC+TGG | 0.495716 | 6:-3075358 | None:intergenic |
TTCTTCTGATGGTTTAAGCA+TGG | 0.496070 | 6:+3066924 | MsaT030138.1:CDS |
TTGGGAGTACAGTGTGGGAG+AGG | 0.496894 | 6:+3071891 | MsaT030138.1:CDS |
TCCGAAAGCCCCTTGGGATG+AGG | 0.497364 | 6:+3071582 | MsaT030138.1:CDS |
GAGAATCCCGCTCCTCCTCC+CGG | 0.498098 | 6:+3062578 | MsaT030138.1:CDS |
TGATACCCACTTCACTTCGT+TGG | 0.498451 | 6:+3067851 | MsaT030138.1:CDS |
TGAGATTCCGAAAGCCCCTT+GGG | 0.498892 | 6:+3071576 | MsaT030138.1:CDS |
ATGATGGTAATATTCCTGAA+TGG | 0.498952 | 6:+3069829 | MsaT030138.1:CDS |
GTTTGTTCTAAGTCCGGCGC+CGG | 0.499686 | 6:+3062641 | MsaT030138.1:CDS |
TGAGGTGGTTGTTGCGGCGG+CGG | 0.499971 | 6:-3062434 | None:intergenic |
TAGAAAAGAATCCGCCCGAT+TGG | 0.501855 | 6:+3069928 | MsaT030138.1:CDS |
TGTTAACCTTATCTTTCCTG+TGG | 0.502807 | 6:+3067248 | MsaT030138.1:CDS |
TGTTTCCTAGAAGGCCATAT+GGG | 0.503701 | 6:-3074005 | None:intergenic |
CAATGTACCACTGGGGAAGT+TGG | 0.505138 | 6:+3072904 | MsaT030138.1:CDS |
CTGAGAGATTCCATTATGCT+GGG | 0.505425 | 6:+3073742 | MsaT030138.1:CDS |
AGCAGTATCCAACTCAAAGA+AGG | 0.506348 | 6:-3073908 | None:intergenic |
GAATCGAATATCTTTCCATC+AGG | 0.506522 | 6:-3066709 | None:intergenic |
CTGGAGCACAGTGGTTTCCC+AGG | 0.507400 | 6:-3068229 | None:intergenic |
GGTGTGTGGTGAGTGTTTAG+CGG | 0.508332 | 6:+3062757 | MsaT030138.1:CDS |
GAAACGTCTCTTTCTTCTGG+TGG | 0.508430 | 6:+3066802 | MsaT030138.1:CDS |
CTGTAACCGTTTATTTCTTG+AGG | 0.508593 | 6:-3073225 | None:intergenic |
AGGACCACCGGGAGGAGGAG+CGG | 0.509301 | 6:-3062585 | None:intergenic |
GTCTAAAGCTTCACAAAGCC+AGG | 0.510305 | 6:+3074463 | MsaT030138.1:CDS |
CTATTGGCTAACGCATTAAG+TGG | 0.512733 | 6:-3073634 | None:intergenic |
TATAACCCACAGGAAAGATA+AGG | 0.513001 | 6:-3067254 | None:intergenic |
ACATATTCAACCTTCAATAA+CGG | 0.513159 | 6:+3066427 | MsaT030138.1:CDS |
GTCTGCGGAGATTACTGCCC+GGG | 0.513262 | 6:+3068890 | MsaT030138.1:CDS |
GTGTGGTTCCCTTCCTGGTG+TGG | 0.513693 | 6:+3068959 | MsaT030138.1:CDS |
ATCGAAAGTGGCTGCTCTGG+TGG | 0.514121 | 6:+3068698 | MsaT030138.1:CDS |
CACTGGTTTCGGTTCCGCTA+CGG | 0.514171 | 6:-3075341 | None:intergenic |
GAAGAAGAAGGTGAAGGTGA+AGG | 0.514948 | 6:-3062503 | None:intergenic |
TCCGATTTCTCAGATGATCC+AGG | 0.515931 | 6:+3075126 | MsaT030138.1:intron |
CGGAATTTCCTATTCCAGAT+GGG | 0.516200 | 6:+3067379 | MsaT030138.1:CDS |
TTTATATAGAAGGCCTAAGA+AGG | 0.518091 | 6:+3068165 | MsaT030138.1:CDS |
CACAGTGGTTTCCCAGGAGG+TGG | 0.518947 | 6:-3068223 | None:intergenic |
GCTTGACGGCATTGAGCTCA+AGG | 0.519161 | 6:-3073311 | None:intergenic |
GCTGTTCTTCAGCATGGAAG+AGG | 0.519273 | 6:+3073490 | MsaT030138.1:CDS |
GAGATTACTGCCCGGGAAAG+TGG | 0.520213 | 6:+3068897 | MsaT030138.1:CDS |
GGAGTGTGGTTGGCTTCCAA+AGG | 0.521922 | 6:+3066449 | MsaT030138.1:CDS |
CTAACTCACTCCGATGATCA+TGG | 0.522517 | 6:+3062373 | None:intergenic |
TGAAATGGGCTTACATAGAT+GGG | 0.522698 | 6:+3067809 | MsaT030138.1:CDS |
TTGGCGTGTGCTGGAGTTCG+TGG | 0.522800 | 6:+3062701 | MsaT030138.1:CDS |
CCCAAGACCACTAGGATTGG+TGG | 0.522880 | 6:-3072995 | None:intergenic |
CCTCCAGTGTAATTATTGCC+TGG | 0.524415 | 6:-3075144 | None:intergenic |
GTGAGTGCCTAGAACCCATA+TGG | 0.524714 | 6:+3073991 | MsaT030138.1:CDS |
CAGGAAAACACTGACGGAGC+TGG | 0.524887 | 6:+3074491 | MsaT030138.1:CDS |
ATTTGCAGCTAAACTTTCCG+TGG | 0.525214 | 6:-3074543 | None:intergenic |
ATTGAATCACACCCAATCAA+TGG | 0.525967 | 6:+3066519 | MsaT030138.1:CDS |
GTTAGTTCCGCCATGATCAT+CGG | 0.526042 | 6:-3062383 | None:intergenic |
TGTACTCATCCTAGAAGAAG+AGG | 0.526804 | 6:+3069767 | MsaT030138.1:CDS |
ATTTGCCTGATTTATGGTCA+TGG | 0.527231 | 6:-3074520 | None:intergenic |
AAAGCTTCTAGCCATTGATT+GGG | 0.527465 | 6:-3066530 | None:intergenic |
TTTCTTTGGGAAAAGTTGAT+GGG | 0.527849 | 6:+3067208 | MsaT030138.1:CDS |
GAAGAGGAGTCTGATGCAAA+TGG | 0.527892 | 6:+3069783 | MsaT030138.1:CDS |
GAGGGAGTCTGTAAAATTTG+TGG | 0.528291 | 6:+3071601 | MsaT030138.1:CDS |
CCGAAAGCCCCTTGGGATGA+GGG | 0.528516 | 6:+3071583 | MsaT030138.1:CDS |
TTTGTGAGCCAAACCAATGA+AGG | 0.528944 | 6:+3067435 | MsaT030138.1:CDS |
CATATGCCTCAAGAAATAAA+CGG | 0.529074 | 6:+3073219 | MsaT030138.1:CDS |
CCAAAATGCTGTTAATGAGT+CGG | 0.530410 | 6:+3073278 | MsaT030138.1:CDS |
GGTTTCGGTTCCGCTACGGC+AGG | 0.532046 | 6:-3075337 | None:intergenic |
CGGAGTTCTTAAAGAATGAC+TGG | 0.532760 | 6:+3075179 | MsaT030138.1:CDS |
TGTTCTAAGTCCGGCGCCGG+TGG | 0.533415 | 6:+3062644 | MsaT030138.1:CDS |
GAAGCTCAATTGGCGAATGA+TGG | 0.533635 | 6:+3069813 | MsaT030138.1:CDS |
TCATTGCCAACAGTGGAAAA+CGG | 0.533936 | 6:+3068086 | MsaT030138.1:CDS |
CCAATCTTAGATCAATAGTC+CGG | 0.535578 | 6:-3070890 | None:intergenic |
ATGAGATTCCGAAAGCCCCT+TGG | 0.535949 | 6:+3071575 | MsaT030138.1:CDS |
CAGTAATCTCCGCAGACTCC+AGG | 0.536115 | 6:-3068884 | None:intergenic |
AGAGCTCCTACTGAACTCAT+TGG | 0.536252 | 6:+3068250 | MsaT030138.1:CDS |
GAGATTAGAAGAAAAGAGAA+TGG | 0.536321 | 6:+3066985 | MsaT030138.1:CDS |
CATTGTCACAATGTACCACT+GGG | 0.536412 | 6:+3072896 | MsaT030138.1:CDS |
TCGGAATTTCCTATTCCAGA+TGG | 0.536764 | 6:+3067378 | MsaT030138.1:CDS |
TGTGACACGTCCTGTTAGAG+TGG | 0.539006 | 6:+3066483 | MsaT030138.1:CDS |
TTGGCTTTCTTGTCAATGGA+CGG | 0.539032 | 6:+3068858 | MsaT030138.1:CDS |
GTTTACAGACTATGCTGAAG+TGG | 0.539133 | 6:+3071498 | MsaT030138.1:CDS |
GACAATGATTGTGCATTGAA+AGG | 0.539871 | 6:-3067410 | None:intergenic |
TAAGATGTTAGGGCTGATGA+AGG | 0.540077 | 6:+3073588 | MsaT030138.1:CDS |
TCTGGAATGCTGACAGATCC+AGG | 0.540185 | 6:-3067891 | None:intergenic |
TTCGGTTCCGCTACGGCAGG+AGG | 0.540765 | 6:-3075334 | None:intergenic |
AAACGTCTCTTTCTTCTGGT+GGG | 0.540774 | 6:+3066803 | MsaT030138.1:CDS |
TAAAATTTGTGGCATCGATA+GGG | 0.540989 | 6:+3071612 | MsaT030138.1:CDS |
TCAAAGTTAAATGGGCAAGA+GGG | 0.540998 | 6:-3074274 | None:intergenic |
GTGTGGTGAGTGTTTAGCGG+GGG | 0.541564 | 6:+3062760 | MsaT030138.1:CDS |
ACACCGCCAGGAAGAGGCGC+AGG | 0.541866 | 6:-3062605 | None:intergenic |
TCTTGGAACTCCAGCTATGG+TGG | 0.542147 | 6:+3070851 | MsaT030138.1:CDS |
TAATCACTAACAAAGGAATA+CGG | 0.542195 | 6:-3074395 | None:intergenic |
GCTTCTTGGAACTCCAGCTA+TGG | 0.542883 | 6:+3070848 | MsaT030138.1:CDS |
CAGAAAACTACCAACAAATG+TGG | 0.543020 | 6:+3069872 | MsaT030138.1:CDS |
AAAGACAATTAACTTGTCCC+TGG | 0.543508 | 6:-3071819 | None:intergenic |
TCTTTGGGAATCTCTTCTGA+AGG | 0.543897 | 6:-3073036 | None:intergenic |
GCTTGAACCCTCCTCTTGCA+AGG | 0.545107 | 6:+3071689 | MsaT030138.1:CDS |
AATCTAACTCATTGAACCAT+GGG | 0.545109 | 6:-3068494 | None:intergenic |
CGCGTGTCAATTTGATGAGG+TGG | 0.545133 | 6:-3062449 | None:intergenic |
TTTCGTTGCTTAAGAGGTGA+TGG | 0.546503 | 6:+3068927 | MsaT030138.1:CDS |
CTTATAATTACTATTGACAA+AGG | 0.546981 | 6:-3066896 | None:intergenic |
CTCAAGATGTCATCTTCTGT+TGG | 0.547220 | 6:-3067534 | None:intergenic |
CATTGAAACTCCACAGCCAC+AGG | 0.548233 | 6:-3073159 | None:intergenic |
TTGAGGATGGAAAAGACTTG+GGG | 0.549654 | 6:-3073194 | None:intergenic |
TTCCGATTAATGAATTGACT+TGG | 0.550031 | 6:+3068811 | MsaT030138.1:CDS |
GTTAACCTTATCTTTCCTGT+GGG | 0.550755 | 6:+3067249 | MsaT030138.1:CDS |
ATGTCACCAATGAGTTCAGT+AGG | 0.551427 | 6:-3068256 | None:intergenic |
TGGTACTGTCCATCTTGTAT+TGG | 0.551782 | 6:+3071727 | MsaT030138.1:CDS |
CTGGAGAGGCTCGGACAAGA+CGG | 0.552858 | 6:+3068736 | MsaT030138.1:CDS |
CAGGGATCCTTGCAAGAGGA+GGG | 0.553738 | 6:-3071696 | None:intergenic |
TTCCCCTGTCAGATTTCTCA+GGG | 0.554494 | 6:-3068518 | None:intergenic |
GGGGAAGTTGGTCTTAAGGA+AGG | 0.555159 | 6:+3072916 | MsaT030138.1:CDS |
TCTAGAACTCCGGCAGCCAA+TGG | 0.555652 | 6:+3066853 | MsaT030138.1:CDS |
TCAGGGATCCTTGCAAGAGG+AGG | 0.555665 | 6:-3071697 | None:intergenic |
ATTTATCCAACGAAGTGAAG+TGG | 0.556030 | 6:-3067857 | None:intergenic |
ATGATTGTGCATTGAAAGGA+TGG | 0.556350 | 6:-3067406 | None:intergenic |
AGATTCCCAAAGAGAAGTGT+AGG | 0.556629 | 6:+3073046 | MsaT030138.1:CDS |
GGAATGGGTGGAAGTTCACG+AGG | 0.557224 | 6:+3068537 | MsaT030138.1:CDS |
GAAGCTCCTGTGGAACCTGA+TGG | 0.557576 | 6:-3068597 | None:intergenic |
GAAATAAACGGTTACAGTGA+AGG | 0.557848 | 6:+3073231 | MsaT030138.1:CDS |
TACCCCAAGACCACTAGGAT+TGG | 0.557877 | 6:-3072998 | None:intergenic |
TGTTTACTCTTCACACCCAA+CGG | 0.559421 | 6:-3062803 | None:intergenic |
TTACAGACTCCCTCATCCCA+AGG | 0.559666 | 6:-3071592 | None:intergenic |
TCTTCTGACAACGATGATGA+GGG | 0.560177 | 6:+3070825 | MsaT030138.1:CDS |
TACAGACTCCCTCATCCCAA+GGG | 0.560262 | 6:-3071591 | None:intergenic |
TTTATTAATGCACACACTGA+AGG | 0.561646 | 6:+3073787 | MsaT030138.1:CDS |
AAGGTGAAGGGATCTCGTTA+AGG | 0.562146 | 6:-3062490 | None:intergenic |
CAATGCATCTGGACCAACAA+AGG | 0.563151 | 6:+3069998 | MsaT030138.1:CDS |
GCAAATAGAAGCAACACAGC+AGG | 0.563284 | 6:+3074560 | MsaT030138.1:CDS |
CAGATAAATCCAAAGGAAGC+CGG | 0.563421 | 6:+3075377 | MsaT030138.1:CDS |
TTGGCTTCTGGAGCTTATGG+TGG | 0.564019 | 6:+3070909 | MsaT030138.1:CDS |
ATTTGATGAGGTGGTTGTTG+CGG | 0.564670 | 6:-3062440 | None:intergenic |
TACGGAAGGCACAAAGGATG+GGG | 0.564673 | 6:-3074377 | None:intergenic |
TTCTTCTGACAACGATGATG+AGG | 0.566118 | 6:+3070824 | MsaT030138.1:CDS |
GCTTCCATCCCAACCACACC+AGG | 0.566416 | 6:-3068972 | None:intergenic |
CTCTGATCCTCCTGCCGTAG+CGG | 0.566455 | 6:+3075327 | MsaT030138.1:CDS |
TCCAAATTCTGAGCCTGGAG+AGG | 0.566584 | 6:+3068722 | MsaT030138.1:CDS |
GCATTGAGCTCAAGGTGGTA+TGG | 0.567289 | 6:-3073303 | None:intergenic |
AGAATCCGCCCGATTGGGCA+AGG | 0.568428 | 6:+3069934 | MsaT030138.1:CDS |
CAAAGTTAAATGGGCAAGAG+GGG | 0.568693 | 6:-3074273 | None:intergenic |
TGAGGCATATGATTTGAGGA+TGG | 0.570073 | 6:-3073207 | None:intergenic |
AGCAGAATCCCAACAAGGGA+AGG | 0.570144 | 6:+3070674 | MsaT030138.1:CDS |
TGTATGAGCTCTTAGAGAAG+TGG | 0.570915 | 6:+3067946 | MsaT030138.1:CDS |
CCCATCAACATCACTAGGCG+GGG | 0.572715 | 6:-3062846 | None:intergenic |
AAAATGGATCTTCTAAAGGA+AGG | 0.574855 | 6:+3074132 | MsaT030138.1:CDS |
AGTCCGGAAGTCAAGAGGGC+GGG | 0.575469 | 6:-3070874 | None:intergenic |
GCCGGTGGTTTGGTGTGTGA+TGG | 0.576668 | 6:+3062659 | MsaT030138.1:CDS |
TCCATCACACACCAAACCAC+CGG | 0.577419 | 6:-3062660 | None:intergenic |
AATGGTGGAAAATGTAAAGC+AGG | 0.578089 | 6:+3074080 | MsaT030138.1:CDS |
TACAGCAAATTGATGAGGGT+CGG | 0.578252 | 6:-3067013 | None:intergenic |
ATGGTGTACTGGTGGAAGGT+TGG | 0.578597 | 6:+3066629 | MsaT030138.1:CDS |
AACTCTCCATGCTGAGAATG+GGG | 0.578947 | 6:-3067703 | None:intergenic |
ACTTCTCTAAGAGCTCATAC+AGG | 0.580636 | 6:-3067944 | None:intergenic |
ATACATAATGGCTGAATCAA+GGG | 0.581133 | 6:-3075272 | None:intergenic |
CACCAATCCTAGTGGTCTTG+GGG | 0.581148 | 6:+3072996 | MsaT030138.1:CDS |
GAGAAGTCCTTAAACTGCAG+AGG | 0.581340 | 6:-3067180 | None:intergenic |
GAGTGTGGTTGGCTTCCAAA+GGG | 0.581411 | 6:+3066450 | MsaT030138.1:CDS |
TGTCGACGGTGAAGTCAGGT+AGG | 0.582244 | 6:-3062538 | None:intergenic |
TGAAAGTTTATACAATGAGG+AGG | 0.582314 | 6:+3071373 | MsaT030138.1:CDS |
ACACACCAAACCACCGGCGC+CGG | 0.584128 | 6:-3062654 | None:intergenic |
TCAAATACCCCAAGACCACT+AGG | 0.585105 | 6:-3073003 | None:intergenic |
AAATACTTTACCACTTTCCC+GGG | 0.585266 | 6:-3068907 | None:intergenic |
GCAAGCGCTGTTCTTCAGCA+TGG | 0.585691 | 6:+3073484 | MsaT030138.1:CDS |
CATCCCAACCACACCAGGAA+GGG | 0.585984 | 6:-3068967 | None:intergenic |
AGGTGAACTGCAATCGAAAG+TGG | 0.588031 | 6:+3068686 | MsaT030138.1:CDS |
CCTTCAGGGATCCTTGCAAG+AGG | 0.588161 | 6:-3071700 | None:intergenic |
AGGTTAACATCATAATATGA+AGG | 0.588196 | 6:-3067234 | None:intergenic |
AGCAAGAGAAGGCAAAGTAG+AGG | 0.588285 | 6:-3075236 | None:intergenic |
GCATTGTAAATTATCTGAGA+AGG | 0.588348 | 6:+3073558 | MsaT030138.1:CDS |
GTTTCCCAGGAGGTGGACAT+CGG | 0.589078 | 6:-3068216 | None:intergenic |
CACTTACAGCAAATTGATGA+GGG | 0.589611 | 6:-3067017 | None:intergenic |
AAAACCGATGTCCACCTCCT+GGG | 0.590169 | 6:+3068212 | MsaT030138.1:CDS |
AGAATATTGGGAGTACAGTG+TGG | 0.591205 | 6:+3071885 | MsaT030138.1:CDS |
ATTTCCCTGAGAAATCTGAC+AGG | 0.591419 | 6:+3068514 | MsaT030138.1:CDS |
AAAGTTGGTCAATGCTTGCA+AGG | 0.591598 | 6:+3067734 | MsaT030138.1:CDS |
TTTGGACCTTGAGTCTGAGA+TGG | 0.592414 | 6:-3066562 | None:intergenic |
CGCACCAAAGCATCTGACAT+AGG | 0.593003 | 6:-3068622 | None:intergenic |
TCTTCCCCATCAACATCACT+AGG | 0.593140 | 6:-3062851 | None:intergenic |
AAATCTAACTCATTGAACCA+TGG | 0.593671 | 6:-3068495 | None:intergenic |
GATCCAGGCAATAATTACAC+TGG | 0.593746 | 6:+3075141 | MsaT030138.1:CDS |
CAGGAATCTATAAATAGCGT+AGG | 0.593945 | 6:+3073351 | MsaT030138.1:CDS |
CAACAAGATTTATAACCCAC+AGG | 0.594509 | 6:-3067264 | None:intergenic |
AAATCTGACAGGGGAATGGG+TGG | 0.594683 | 6:+3068525 | MsaT030138.1:CDS |
GCAGTTTACTGTGCACCTGA+TGG | 0.594837 | 6:+3066694 | MsaT030138.1:CDS |
GTGACACGTCCTGTTAGAGT+GGG | 0.595714 | 6:+3066484 | MsaT030138.1:CDS |
AGAAGGAACTTATCAACCCA+TGG | 0.596599 | 6:+3068478 | MsaT030138.1:CDS |
TCAAGCTCTTCTAAGAACAA+TGG | 0.597626 | 6:-3068456 | None:intergenic |
GCAGTTGTTGCATTATTGGA+TGG | 0.597735 | 6:+3070634 | MsaT030138.1:CDS |
GGAGAGGCTCGGACAAGACG+GGG | 0.598135 | 6:+3068738 | MsaT030138.1:CDS |
GTTCTTAGAAGAGCTTGAGA+AGG | 0.598417 | 6:+3068461 | MsaT030138.1:CDS |
TCACTTACAGCAAATTGATG+AGG | 0.598434 | 6:-3067018 | None:intergenic |
AGTGAAGCATATGCATCAGA+AGG | 0.599098 | 6:+3067576 | MsaT030138.1:CDS |
AAAAGTAAAAGATGGCCGTT+GGG | 0.599295 | 6:+3062788 | MsaT030138.1:CDS |
GGGGTGTGAAAAGTAAAAGA+TGG | 0.599301 | 6:+3062780 | MsaT030138.1:CDS |
GAATATTGGGAGTACAGTGT+GGG | 0.599385 | 6:+3071886 | MsaT030138.1:CDS |
CAGGACTTCTGGCGTTAGGG+AGG | 0.600611 | 6:+3074099 | MsaT030138.1:CDS |
CGGCGGAAGGTTGTTACCTG+CGG | 0.600798 | 6:-3062417 | None:intergenic |
GTCAGGTAGGGTTTCAACGA+AGG | 0.601624 | 6:-3062525 | None:intergenic |
TTTATCCAACGAAGTGAAGT+GGG | 0.601813 | 6:-3067856 | None:intergenic |
AACCTTCAATAACGGGAGTG+TGG | 0.603058 | 6:+3066435 | MsaT030138.1:CDS |
CAATAGTCCGGAAGTCAAGA+GGG | 0.603762 | 6:-3070878 | None:intergenic |
GCAGTATCCAACTCAAAGAA+GGG | 0.605811 | 6:-3073907 | None:intergenic |
GAGCGGCGAGTATAGGAGAG+TGG | 0.606273 | 6:+3062735 | MsaT030138.1:CDS |
CACTAACAAAGGAATACGGA+AGG | 0.606527 | 6:-3074391 | None:intergenic |
TGTTTACCACCAATACAAGA+TGG | 0.606600 | 6:-3071736 | None:intergenic |
GGGAAGTTGGTCTTAAGGAA+GGG | 0.608264 | 6:+3072917 | MsaT030138.1:CDS |
TGAAACTGATTCAGAAATCG+AGG | 0.608634 | 6:+3073675 | MsaT030138.1:CDS |
CCATAAATCAGGCAAATCCA+CGG | 0.609269 | 6:+3074526 | MsaT030138.1:CDS |
TTTACAGACTATGCTGAAGT+GGG | 0.609344 | 6:+3071499 | MsaT030138.1:CDS |
TCAATAGTCCGGAAGTCAAG+AGG | 0.610877 | 6:-3070879 | None:intergenic |
ACCTAACTCTCTTGTTACAA+AGG | 0.611746 | 6:+3073855 | MsaT030138.1:CDS |
AGAAAACTACCAACAAATGT+GGG | 0.611755 | 6:+3069873 | MsaT030138.1:CDS |
TGAGGATGGAAAAGACTTGG+GGG | 0.612204 | 6:-3073193 | None:intergenic |
AGCGGTCCCCATTCTCAGCA+TGG | 0.612548 | 6:+3067697 | MsaT030138.1:CDS |
TCAGTTTCATAAACAATCCA+CGG | 0.612580 | 6:-3073661 | None:intergenic |
TGGGATGGAAGCTGATGCAT+TGG | 0.613264 | 6:+3068983 | MsaT030138.1:CDS |
GGACGGTAACCTGGAGTCTG+CGG | 0.613310 | 6:+3068875 | MsaT030138.1:CDS |
AATGATAGTATGGATTTAGA+CGG | 0.613320 | 6:+3067471 | MsaT030138.1:CDS |
AGTCTGCGGAGATTACTGCC+CGG | 0.613644 | 6:+3068889 | MsaT030138.1:CDS |
AGCGGCGAGTATAGGAGAGT+GGG | 0.615377 | 6:+3062736 | MsaT030138.1:CDS |
TTATTGGATGGTGTAACTGA+TGG | 0.615863 | 6:+3070646 | MsaT030138.1:CDS |
ACTGGAGCACTCAGTTAGCA+AGG | 0.616248 | 6:+3069962 | MsaT030138.1:CDS |
GACATAGGAAGAAGCTCCTG+TGG | 0.616284 | 6:-3068607 | None:intergenic |
TCCATAGAATTGTAGCCAGA+CGG | 0.616326 | 6:-3066763 | None:intergenic |
TGATGAGGTGGTTGTTGCGG+CGG | 0.616771 | 6:-3062437 | None:intergenic |
CCATCCCAACCACACCAGGA+AGG | 0.617125 | 6:-3068968 | None:intergenic |
ATGGAACATGTGAATGCTCA+GGG | 0.617560 | 6:+3066943 | MsaT030138.1:CDS |
CCCGCCTAGTGATGTTGATG+GGG | 0.618025 | 6:+3062847 | MsaT030138.1:CDS |
CGTTGCTTAAGAGGTGATGG+TGG | 0.618217 | 6:+3068930 | MsaT030138.1:CDS |
AAGGATATCTGCAAGAAGAA+CGG | 0.618975 | 6:+3067753 | MsaT030138.1:CDS |
TGAGCTCTTAGAGAAGTGGT+TGG | 0.619725 | 6:+3067950 | MsaT030138.1:CDS |
ATTCTGAGCCTGGAGAGGCT+CGG | 0.620370 | 6:+3068727 | MsaT030138.1:CDS |
AATGGGTGGAAGTTCACGAG+GGG | 0.621078 | 6:+3068539 | MsaT030138.1:CDS |
CGGAAGGTTGTTACCTGCGG+CGG | 0.621332 | 6:-3062414 | None:intergenic |
AGGAAAAGGAAGGAATTGGA+TGG | 0.621504 | 6:+3075409 | MsaT030138.1:CDS |
GGATTGGTGGTTGTAGCATG+TGG | 0.622105 | 6:-3072982 | None:intergenic |
TGGTGTGTGATGGATGTGAA+CGG | 0.622459 | 6:+3062669 | MsaT030138.1:CDS |
AAATCGAGGAGCTATTGGGT+TGG | 0.623917 | 6:+3073689 | MsaT030138.1:CDS |
GAAGTACCATCTCAGACTCA+AGG | 0.624744 | 6:+3066556 | MsaT030138.1:CDS |
ATGGGTGGAAGTTCACGAGG+GGG | 0.625342 | 6:+3068540 | MsaT030138.1:CDS |
TCTCGTTAAGGTCGATGCAG+AGG | 0.625670 | 6:-3062478 | None:intergenic |
ATGTGGGAACCCGAATCAGA+AGG | 0.625738 | 6:+3069889 | MsaT030138.1:CDS |
GAAGTCAAACAGGAAAAGGA+AGG | 0.626065 | 6:+3075399 | MsaT030138.1:CDS |
GAAAAGTAAAAGATGGCCGT+TGG | 0.626873 | 6:+3062787 | MsaT030138.1:CDS |
CAGTCTTGCACACCAAGAAG+CGG | 0.626876 | 6:-3068023 | None:intergenic |
GTCGACGGTGAAGTCAGGTA+GGG | 0.629490 | 6:-3062537 | None:intergenic |
CTTCTGACAACGATGATGAG+GGG | 0.629551 | 6:+3070826 | MsaT030138.1:CDS |
GAGCACAGTGGTTTCCCAGG+AGG | 0.630512 | 6:-3068226 | None:intergenic |
GGACTTAGAACAAACAGCGC+AGG | 0.633289 | 6:-3062633 | None:intergenic |
GGTGATGGTGGTTTGCTGTG+TGG | 0.634647 | 6:+3068942 | MsaT030138.1:CDS |
CCTCTTGCAAGGATCCCTGA+AGG | 0.634782 | 6:+3071700 | MsaT030138.1:CDS |
TGAAAGGCATGGTGTACTGG+TGG | 0.634808 | 6:+3066621 | MsaT030138.1:CDS |
CCAGGCAATAATTACACTGG+AGG | 0.638626 | 6:+3075144 | MsaT030138.1:CDS |
GTTTCAACGAAGGAAGAAGA+AGG | 0.638653 | 6:-3062515 | None:intergenic |
AGTATAGGAGAGTGGGTGTG+TGG | 0.639379 | 6:+3062743 | MsaT030138.1:CDS |
GGAACCGAAACCAGTGATCA+CGG | 0.640900 | 6:+3075348 | MsaT030138.1:CDS |
CTAACCGATTCCACCGCCGC+AGG | 0.641238 | 6:+3062401 | MsaT030138.1:CDS |
TAGCTCTTCATTGCCAACAG+TGG | 0.645368 | 6:+3068079 | MsaT030138.1:CDS |
ACACACTGAAGGTCAGGTTG+AGG | 0.646574 | 6:+3073798 | MsaT030138.1:CDS |
GAATGGGTGGAAGTTCACGA+GGG | 0.647155 | 6:+3068538 | MsaT030138.1:CDS |
TGTGTGGTGAGTGTTTAGCG+GGG | 0.649142 | 6:+3062759 | MsaT030138.1:CDS |
AAGGAATACGGAAGGCACAA+AGG | 0.651279 | 6:-3074383 | None:intergenic |
ACTGGAGGATATGATTAAGA+CGG | 0.651632 | 6:+3075159 | MsaT030138.1:CDS |
AATGGTCTCAAGGAGGACAA+AGG | 0.653684 | 6:-3074679 | None:intergenic |
TATATGCGAAGAGCAAGAGA+AGG | 0.654474 | 6:-3075247 | None:intergenic |
AAAGATGTTGGCGTTGCTGG+TGG | 0.654656 | 6:+3074437 | MsaT030138.1:intron |
AAGATGTTAGGGCTGATGAA+GGG | 0.655905 | 6:+3073589 | MsaT030138.1:CDS |
GTGGATGCAGATAAATCCAA+AGG | 0.656488 | 6:+3075370 | MsaT030138.1:CDS |
CAGTGAAGGACAATGTGTGC+CGG | 0.658251 | 6:+3073245 | MsaT030138.1:CDS |
TGTGGTGAGTGTTTAGCGGG+GGG | 0.661131 | 6:+3062761 | MsaT030138.1:CDS |
GTTAGCAAGGCAGTGTACAA+GGG | 0.661893 | 6:+3069975 | MsaT030138.1:CDS |
TCCCCATCAACATCACTAGG+CGG | 0.663527 | 6:-3062848 | None:intergenic |
ACCCAAAAGATCGACGAACA+GGG | 0.664457 | 6:-3073392 | None:intergenic |
AGAGGCGCAGGACCACCGGG+AGG | 0.666010 | 6:-3062593 | None:intergenic |
TAGTCCGGAAGTCAAGAGGG+CGG | 0.667566 | 6:-3070875 | None:intergenic |
ACGAAGGAAGAAGAAGGTGA+AGG | 0.668161 | 6:-3062509 | None:intergenic |
AGGCATGGTGTACTGGTGGA+AGG | 0.669238 | 6:+3066625 | MsaT030138.1:CDS |
AGCATATTGATCTTGGTCCG+CGG | 0.672520 | 6:-3068789 | None:intergenic |
GAGTTTGAGGGACACAATGG+TGG | 0.672617 | 6:+3074065 | MsaT030138.1:CDS |
GCGTGTGCTGGAGTTCGTGG+TGG | 0.673316 | 6:+3062704 | MsaT030138.1:CDS |
AATCCCGCTCCTCCTCCCGG+TGG | 0.675488 | 6:+3062581 | MsaT030138.1:CDS |
GTTTCTCAGGAAAACACTGA+CGG | 0.677981 | 6:+3074485 | MsaT030138.1:CDS |
GGGAGTTGATGGTTGCTGTG+TGG | 0.679375 | 6:+3074654 | MsaT030138.1:intron |
TCTTTGGGAGAAGAAAGAGA+TGG | 0.681471 | 6:+3074599 | MsaT030138.1:CDS |
GGGAAGAGTTGCATGAATCG+AGG | 0.681694 | 6:+3062867 | MsaT030138.1:CDS |
AGTGCAGCAGAATCCCAACA+AGG | 0.682264 | 6:+3070669 | MsaT030138.1:CDS |
TTTCCCTGAGAAATCTGACA+GGG | 0.684464 | 6:+3068515 | MsaT030138.1:CDS |
TGAGAGATTCCATTATGCTG+GGG | 0.684537 | 6:+3073743 | MsaT030138.1:CDS |
GGTCCTGCGCCTCTTCCTGG+CGG | 0.686107 | 6:+3062602 | MsaT030138.1:CDS |
ACAGACTCCCTCATCCCAAG+GGG | 0.688226 | 6:-3071590 | None:intergenic |
ATGAAGTAGCTAATTATCTG+GGG | 0.689150 | 6:+3066737 | MsaT030138.1:CDS |
TCGTGGTGGAAGAATTGGAG+CGG | 0.690037 | 6:+3062718 | MsaT030138.1:CDS |
GTGCAGCAGAATCCCAACAA+GGG | 0.692761 | 6:+3070670 | MsaT030138.1:CDS |
GAAGGTCAGGTTGAGGACCA+AGG | 0.693792 | 6:+3073805 | MsaT030138.1:CDS |
AGTGGAAAACGGTTACCTAG+TGG | 0.696235 | 6:+3068097 | MsaT030138.1:CDS |
CTTAAGACCAACTTCCCCAG+TGG | 0.697021 | 6:-3072911 | None:intergenic |
ACAGCTTAAGACTGTTCCTG+TGG | 0.697913 | 6:+3073143 | MsaT030138.1:CDS |
ATATGGATAGTGCAGTTCCG+CGG | 0.698028 | 6:+3068772 | MsaT030138.1:CDS |
TGTGATAAATGATTCCAACA+AGG | 0.698537 | 6:+3074315 | MsaT030138.1:CDS |
GAACGCGTGTCAATTTGATG+AGG | 0.700418 | 6:-3062452 | None:intergenic |
ATAAGTACGAACGATGTCGA+CGG | 0.701679 | 6:-3062552 | None:intergenic |
TCCAACTAATGGTCTCAAGG+AGG | 0.703300 | 6:-3074686 | None:intergenic |
GTGGAGTTTGAGGGACACAA+TGG | 0.709569 | 6:+3074062 | MsaT030138.1:CDS |
TTCCCTGAGAAATCTGACAG+GGG | 0.713734 | 6:+3068516 | MsaT030138.1:CDS |
GCTACAACCACCAATCCTAG+TGG | 0.715473 | 6:+3072988 | MsaT030138.1:CDS |
CGTTAGCCAATAGTTCACCG+TGG | 0.733819 | 6:+3073644 | MsaT030138.1:CDS |
AGTTCTTAAAGAATGACTGG+TGG | 0.737756 | 6:+3075182 | MsaT030138.1:CDS |
TGACGGCATTGAGCTCAAGG+TGG | 0.738272 | 6:-3073308 | None:intergenic |
GTAGGAGCTCTGGAGCACAG+TGG | 0.745680 | 6:-3068238 | None:intergenic |
ACTCACTCCGATGATCATGG+CGG | 0.776957 | 6:+3062376 | None:intergenic |
ACCGAAACCAGTGATCACGG+TGG | 0.789385 | 6:+3075351 | MsaT030138.1:CDS |
ATTGTCACAATGTACCACTG+GGG | 0.815271 | 6:+3072897 | MsaT030138.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 3062386 | 3075435 | 3062386 | ID=MsaG030138 |
Chr6 | mRNA | 3062386 | 3075435 | 3062386 | ID=MsaT030138.1;Parent=MsaG030138 |
Chr6 | exon | 3062386 | 3062888 | 3062386 | ID=MsaT030138.1.exon1;Parent=MsaT030138.1 |
Chr6 | CDS | 3062386 | 3062888 | 3062386 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3066372 | 3067032 | 3066372 | ID=MsaT030138.1.exon2;Parent=MsaT030138.1 |
Chr6 | CDS | 3066372 | 3067032 | 3066372 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3067171 | 3068118 | 3067171 | ID=MsaT030138.1.exon3;Parent=MsaT030138.1 |
Chr6 | CDS | 3067171 | 3068118 | 3067171 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3068148 | 3068285 | 3068148 | ID=MsaT030138.1.exon4;Parent=MsaT030138.1 |
Chr6 | CDS | 3068148 | 3068285 | 3068148 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3068408 | 3069004 | 3068408 | ID=MsaT030138.1.exon5;Parent=MsaT030138.1 |
Chr6 | CDS | 3068408 | 3069004 | 3068408 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3069756 | 3070019 | 3069756 | ID=MsaT030138.1.exon6;Parent=MsaT030138.1 |
Chr6 | CDS | 3069756 | 3070019 | 3069756 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3070631 | 3070751 | 3070631 | ID=MsaT030138.1.exon7;Parent=MsaT030138.1 |
Chr6 | CDS | 3070631 | 3070751 | 3070631 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3070790 | 3070965 | 3070790 | ID=MsaT030138.1.exon8;Parent=MsaT030138.1 |
Chr6 | CDS | 3070790 | 3070965 | 3070790 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3071296 | 3071394 | 3071296 | ID=MsaT030138.1.exon9;Parent=MsaT030138.1 |
Chr6 | CDS | 3071296 | 3071394 | 3071296 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3071478 | 3071916 | 3071478 | ID=MsaT030138.1.exon10;Parent=MsaT030138.1 |
Chr6 | CDS | 3071478 | 3071916 | 3071478 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3072747 | 3072821 | 3072747 | ID=MsaT030138.1.exon11;Parent=MsaT030138.1 |
Chr6 | CDS | 3072747 | 3072821 | 3072747 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3072863 | 3073412 | 3072863 | ID=MsaT030138.1.exon12;Parent=MsaT030138.1 |
Chr6 | CDS | 3072863 | 3073412 | 3072863 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3073459 | 3073917 | 3073459 | ID=MsaT030138.1.exon13;Parent=MsaT030138.1 |
Chr6 | CDS | 3073459 | 3073917 | 3073459 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3073962 | 3074167 | 3073962 | ID=MsaT030138.1.exon14;Parent=MsaT030138.1 |
Chr6 | CDS | 3073962 | 3074167 | 3073962 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3074209 | 3074406 | 3074209 | ID=MsaT030138.1.exon15;Parent=MsaT030138.1 |
Chr6 | CDS | 3074209 | 3074406 | 3074209 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3074441 | 3074623 | 3074441 | ID=MsaT030138.1.exon16;Parent=MsaT030138.1 |
Chr6 | CDS | 3074441 | 3074623 | 3074441 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3074659 | 3074762 | 3074659 | ID=MsaT030138.1.exon17;Parent=MsaT030138.1 |
Chr6 | CDS | 3074659 | 3074762 | 3074659 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Chr6 | exon | 3075139 | 3075435 | 3075139 | ID=MsaT030138.1.exon18;Parent=MsaT030138.1 |
Chr6 | CDS | 3075139 | 3075435 | 3075139 | ID=cds.MsaT030138.1;Parent=MsaT030138.1 |
Gene Sequence |
Protein sequence |