Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG030140 | XP_013450825.2 | 93.248 | 2029 | 71 | 7 | 1 | 1971 | 143 | 2163 | 0.0 | 3833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG030140 | sp|Q9SGH2|MBD9_ARATH | 43.211 | 2099 | 995 | 41 | 1 | 1971 | 146 | 2175 | 0.0 | 1466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG030140 | tr|A0A072UGI6|A0A072UGI6_MEDTR | 93.248 | 2029 | 71 | 7 | 1 | 1971 | 141 | 2161 | 0.0 | 3833 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG030140 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG030140 | MtrunA17_Chr6g0451001 | 93.248 | 2029 | 71 | 7 | 1 | 1971 | 143 | 2163 | 0.0 | 3754 |
| MsaG030140 | MtrunA17_Chr3g0125331 | 43.836 | 73 | 37 | 2 | 1087 | 1155 | 704 | 776 | 6.22e-12 | 71.2 |
| MsaG030140 | MtrunA17_Chr3g0129871 | 41.818 | 55 | 32 | 0 | 1078 | 1132 | 13 | 67 | 4.61e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG030140 | AT3G01460.1 | 43.211 | 2099 | 995 | 41 | 1 | 1971 | 146 | 2175 | 0.0 | 1466 |
Find 483 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAAACTTTCAAAATTC+TGG | 0.103334 | 6:-3121418 | None:intergenic |
| CCGACTCATTAACAGCATTT+TGG | 0.127841 | 6:-3123337 | None:intergenic |
| AACTCTTGAGATCTATATTT+TGG | 0.136879 | 6:-3123827 | None:intergenic |
| GTCAGAGAAATTGGTCTTAT+TGG | 0.142468 | 6:+3124404 | MsaT030140.1:CDS |
| CCCTGTTCGTCGGGATCTTT+TGG | 0.150148 | 6:+3123451 | MsaT030140.1:CDS |
| CATCTATGGAATTCATATTT+TGG | 0.156392 | 6:-3123178 | None:intergenic |
| GAAAGCAGTTGTTGCATTAT+TGG | 0.162858 | 6:+3120686 | MsaT030140.1:intron |
| CGAACTTCCTCTGCAGTTTA+AGG | 0.168104 | 6:+3117225 | MsaT030140.1:CDS |
| TGAATTTGTCCAAGAAATTT+TGG | 0.169683 | 6:+3118044 | MsaT030140.1:CDS |
| GTGATTCTGGACCTATATTT+AGG | 0.186761 | 6:+3117386 | MsaT030140.1:CDS |
| CATCAGACTCCTCTTCTTCT+AGG | 0.191574 | 6:-3119829 | None:intergenic |
| TCCACAAAAGCTGCCAAATT+TGG | 0.194799 | 6:+3122930 | MsaT030140.1:CDS |
| GCCTCTCCAGGCTCAGAATT+TGG | 0.198805 | 6:-3118770 | None:intergenic |
| CCGTAGATTTGCCTGATTTA+TGG | 0.200608 | 6:-3124589 | None:intergenic |
| GGACTTCTCTGTTCTTTCTT+TGG | 0.209256 | 6:+3117246 | MsaT030140.1:CDS |
| CTCTCTGACCTTCATTGGTT+TGG | 0.216158 | 6:-3117490 | None:intergenic |
| TTGCTGTGTGGTTCCCTTCC+TGG | 0.218858 | 6:+3119001 | MsaT030140.1:CDS |
| CTAAGAACAATGGTTCTTTC+AGG | 0.221810 | 6:-3118493 | None:intergenic |
| GCTCAAGCTGCTGTCGTATC+AGG | 0.226987 | 6:-3122818 | None:intergenic |
| CTGTCCAACTGTGCCTTTGA+TGG | 0.234547 | 6:-3124851 | None:intergenic |
| GACCTATATTTAGGATTAAA+AGG | 0.235660 | 6:+3117395 | MsaT030140.1:CDS |
| TTGTGACAATGTACCAAATT+TGG | 0.240887 | 6:-3122943 | None:intergenic |
| CATGTATCTTCAAAGTTAAA+TGG | 0.241980 | 6:-3124344 | None:intergenic |
| TGATGAAATTGGTCAAATTT+TGG | 0.247640 | 6:+3117714 | MsaT030140.1:CDS |
| GCTTACATAGATGGGATTTA+AGG | 0.256145 | 6:+3117863 | MsaT030140.1:CDS |
| TGCAAGCATTGACCAACTTT+TGG | 0.257143 | 6:-3117777 | None:intergenic |
| CTTTGTCAATAGTAATTATA+AGG | 0.263896 | 6:+3116949 | MsaT030140.1:CDS |
| ATTGAACCTACACTTCTCTT+TGG | 0.265512 | 6:-3123111 | None:intergenic |
| AGCAATGTTCGTGTTGCTTT+TGG | 0.265569 | 6:+3121356 | MsaT030140.1:CDS |
| AAATTCCAACAAATCATCTT+TGG | 0.284602 | 6:+3124646 | MsaT030140.1:CDS |
| TAGAACCCATATGGCCTTCT+AGG | 0.287242 | 6:+3124061 | MsaT030140.1:CDS |
| AAAGATTAATCTACTTGATA+TGG | 0.295276 | 6:+3124799 | MsaT030140.1:CDS |
| GACTTCTCTGTTCTTTCTTT+GGG | 0.297129 | 6:+3117247 | MsaT030140.1:CDS |
| GAAGCGGTTCCAAAATTTCT+TGG | 0.297423 | 6:-3118053 | None:intergenic |
| ATTCCATTGGCCGACTGTAC+TGG | 0.302086 | 6:+3123480 | MsaT030140.1:CDS |
| AATGAAACGTCTCTTTCTTC+TGG | 0.302538 | 6:+3116851 | MsaT030140.1:CDS |
| CCCTCATCCCAAGGGGCTTT+CGG | 0.302733 | 6:-3121637 | None:intergenic |
| AACGATGATGAGGGGCTTCT+TGG | 0.304477 | 6:+3120888 | MsaT030140.1:CDS |
| TCCAGCACTTGTGCCCATTC+AGG | 0.305542 | 6:-3119896 | None:intergenic |
| ACAGAACGAACACAGCTTAC+TGG | 0.306532 | 6:+3121829 | MsaT030140.1:CDS |
| AGTCTCTCTCTGACCTTCAT+TGG | 0.307882 | 6:-3117495 | None:intergenic |
| AAGGAACTTGTCAGAGAAAT+TGG | 0.309836 | 6:+3124395 | MsaT030140.1:CDS |
| GCCTGCAAAATTAACTCATT+TGG | 0.312194 | 6:-3116632 | None:intergenic |
| AAGGATAACTATAAGATGTT+AGG | 0.314494 | 6:+3123638 | MsaT030140.1:CDS |
| TTCTCTGACAAGTTCCTTGT+TGG | 0.317808 | 6:-3124390 | None:intergenic |
| TCGGTCAATCTTGCCTTCTT+AGG | 0.319067 | 6:-3118225 | None:intergenic |
| TTCAGAAATCGAGGAGCTAT+TGG | 0.319828 | 6:+3123745 | MsaT030140.1:CDS |
| AACTATACGTGAACGTCCTC+TGG | 0.320980 | 6:-3123516 | None:intergenic |
| TTGTCAGTTAGCAAAGATTC+TGG | 0.322868 | 6:+3123575 | MsaT030140.1:CDS |
| GTTTGACTTCCGGCTTCCTT+TGG | 0.324532 | 6:-3125454 | None:intergenic |
| GGACAGTACCAGTTTCCTTC+AGG | 0.326619 | 6:-3121769 | None:intergenic |
| TCTTCCTATGTCAGATGCTT+TGG | 0.326733 | 6:+3118665 | MsaT030140.1:CDS |
| AGAAGGCAAAGTAGAGGATT+TGG | 0.326844 | 6:-3125298 | None:intergenic |
| GAGTTAGGTGCTGTATTTCT+TGG | 0.327047 | 6:-3123902 | None:intergenic |
| CATGAACACACCTTCTGATT+CGG | 0.327208 | 6:-3119952 | None:intergenic |
| GGCCAAGTCAATTCATTAAT+CGG | 0.328366 | 6:-3118860 | None:intergenic |
| AGCTGTTTCTGTGTCAGCTC+TGG | 0.329837 | 6:-3124249 | None:intergenic |
| AGATTGGCTTCTGGAGCTTA+TGG | 0.331956 | 6:+3120960 | MsaT030140.1:CDS |
| TACAAAGGCCACTTCTTTGC+TGG | 0.334967 | 6:+3123931 | MsaT030140.1:CDS |
| ATATATCTACGCGCTAGTTC+TGG | 0.335172 | 6:-3118881 | None:intergenic |
| GTGAAATGGGCTTACATAGA+TGG | 0.336167 | 6:+3117854 | MsaT030140.1:CDS |
| CTCTCAGTTAAACTTGAATT+AGG | 0.347947 | 6:-3125372 | None:intergenic |
| TAGAAGGCCATATGGGTTCT+AGG | 0.348701 | 6:-3124059 | None:intergenic |
| TGTAGTCCTGCTTCAGATAA+GGG | 0.349706 | 6:+3124698 | MsaT030140.1:CDS |
| TCCTCAAAACCCACTCTAAC+AGG | 0.351908 | 6:-3116545 | None:intergenic |
| GAAATACTTTACCACTTTCC+CGG | 0.352122 | 6:-3118955 | None:intergenic |
| GTTGGCTTCCAAAGGGCATC+TGG | 0.352469 | 6:+3116509 | MsaT030140.1:CDS |
| AAACTCCACATCGCTCAAAA+AGG | 0.352947 | 6:-3124109 | None:intergenic |
| TAATTCAAGGTTTATATAGA+AGG | 0.355790 | 6:+3118202 | MsaT030140.1:CDS |
| AGTCTTAAGCTGTCCATCTA+TGG | 0.356223 | 6:-3123192 | None:intergenic |
| GTATAAACTTTCAAAATTCT+GGG | 0.356842 | 6:-3121417 | None:intergenic |
| TATCTTGGCTTTCTTGTCAA+TGG | 0.358619 | 6:+3118901 | MsaT030140.1:CDS |
| AACAATCCACGGTGAACTAT+TGG | 0.358762 | 6:-3123711 | None:intergenic |
| CAAAGCTTCTAGCCATTGAT+TGG | 0.359559 | 6:-3116583 | None:intergenic |
| TTGAACCTACACTTCTCTTT+GGG | 0.361395 | 6:-3123110 | None:intergenic |
| GTATGAAGTAGCTAATTATC+TGG | 0.364658 | 6:+3116787 | MsaT030140.1:CDS |
| TAAAGGTCAATCTAAATATC+AGG | 0.367611 | 6:+3118173 | MsaT030140.1:CDS |
| ATAAAAGATGTTGGCGTTGC+TGG | 0.367768 | 6:+3124497 | MsaT030140.1:CDS |
| ATTGATCTAAGATTGGCTTC+TGG | 0.367873 | 6:+3120951 | MsaT030140.1:CDS |
| CTTTCTTTGGGAAAAGTTGA+TGG | 0.367920 | 6:+3117259 | MsaT030140.1:CDS |
| TCCTGAATGGGCACAAGTGC+TGG | 0.370033 | 6:+3119895 | MsaT030140.1:CDS |
| TGGCCGACTGTACTGGGCTT+TGG | 0.374375 | 6:+3123487 | MsaT030140.1:CDS |
| CATATGCATCAGAAGGATTA+AGG | 0.374868 | 6:+3117629 | MsaT030140.1:CDS |
| AGAGGGCGGGCCACCATAGC+TGG | 0.377851 | 6:-3120915 | None:intergenic |
| CCGGACTATTGATCTAAGAT+TGG | 0.380315 | 6:+3120944 | MsaT030140.1:CDS |
| TTCTCCCAAAGATGATTTGT+TGG | 0.380986 | 6:-3124651 | None:intergenic |
| CCACCAATCCTAGTGGTCTT+GGG | 0.382515 | 6:+3123054 | MsaT030140.1:CDS |
| AAACAGGAAAAGGAAGGAAT+TGG | 0.384022 | 6:+3125473 | MsaT030140.1:CDS |
| GCTTCAGATAAGGGAGTTGA+TGG | 0.388472 | 6:+3124707 | MsaT030140.1:CDS |
| GTGTACAAGGGCAATGCATC+TGG | 0.388911 | 6:+3120040 | MsaT030140.1:CDS |
| CCCAAAAGATCCCGACGAAC+AGG | 0.396737 | 6:-3123452 | None:intergenic |
| TCCACCGTGATCACTGGTTT+CGG | 0.398513 | 6:-3125420 | None:intergenic |
| TGGCCCGCCCTCTTGACTTC+CGG | 0.399001 | 6:+3120925 | MsaT030140.1:CDS |
| TGGTTCTTCTGAAGCTCAAT+TGG | 0.399204 | 6:+3119856 | MsaT030140.1:CDS |
| GTATTTCTTGGCAAACAAAC+AGG | 0.399535 | 6:-3123890 | None:intergenic |
| GGTTCAATTCAATATAATAC+TGG | 0.400524 | 6:+3117661 | MsaT030140.1:CDS |
| GAGAGAGACTAATGATAGTA+TGG | 0.402024 | 6:+3117508 | MsaT030140.1:CDS |
| AATCGGAAGCATATTGATCT+TGG | 0.402173 | 6:-3118843 | None:intergenic |
| AATTCCAACAAATCATCTTT+GGG | 0.403575 | 6:+3124647 | MsaT030140.1:CDS |
| CTCTCTGCATAAATTGTGTC+TGG | 0.404691 | 6:-3117955 | None:intergenic |
| CGTCTTGTCCGAGCCTCTCC+AGG | 0.405617 | 6:-3118782 | None:intergenic |
| ACCGTCTGGCTACAATTCTA+TGG | 0.408954 | 6:+3116814 | MsaT030140.1:CDS |
| TCACTACTAAGAGTGCTAAT+AGG | 0.410003 | 6:+3118713 | MsaT030140.1:CDS |
| TCTTTGCTGGAAAAGAATTA+CGG | 0.410440 | 6:+3123944 | MsaT030140.1:CDS |
| ACAAGTTAATTGTCTTTACT+TGG | 0.411724 | 6:+3121879 | MsaT030140.1:CDS |
| CCACTGAAGAGCACCTTTGT+TGG | 0.413205 | 6:-3120064 | None:intergenic |
| CTCAAATACTAGTAAATGTC+TGG | 0.415576 | 6:+3123013 | MsaT030140.1:CDS |
| TTCACAAAGCCAGGTTTCTC+AGG | 0.416127 | 6:+3124535 | MsaT030140.1:CDS |
| CAAGGATCCCTGAAGGAAAC+TGG | 0.418916 | 6:+3121761 | MsaT030140.1:CDS |
| TAAACATGTTGAAAGTGAAA+TGG | 0.418967 | 6:+3117840 | MsaT030140.1:CDS |
| CTTGTCAATGGACGGTAACC+TGG | 0.421425 | 6:+3118913 | MsaT030140.1:CDS |
| CCAATGATGAAAAGTTGTAT+AGG | 0.422392 | 6:+3124028 | MsaT030140.1:CDS |
| CAAAATATGAATTCCATAGA+TGG | 0.425955 | 6:+3123179 | MsaT030140.1:CDS |
| ATTCCCCTGTCAGATTTCTC+AGG | 0.427786 | 6:-3118566 | None:intergenic |
| AAGAAAGTCTTCTAGAACTC+CGG | 0.431554 | 6:+3116895 | MsaT030140.1:CDS |
| TACAAGCAATGTTTCCTAGA+AGG | 0.431759 | 6:-3124075 | None:intergenic |
| GGCTAACGCATTAAGTGGTT+GGG | 0.432947 | 6:-3123690 | None:intergenic |
| ATGGTTGACCCATCTGGAAT+AGG | 0.433263 | 6:-3117434 | None:intergenic |
| TCAGAAATCGAGGAGCTATT+GGG | 0.434775 | 6:+3123746 | MsaT030140.1:CDS |
| ATGTCAGAGCCAATCATTGA+TGG | 0.435077 | 6:-3116719 | None:intergenic |
| GCCTTTGTAACAAGAGAGTT+AGG | 0.436454 | 6:-3123917 | None:intergenic |
| GACAGGCTTCAGATATTAAT+CGG | 0.436854 | 6:-3118622 | None:intergenic |
| TAACTCTCCATGCTGAGAAT+GGG | 0.437899 | 6:-3117750 | None:intergenic |
| AAAGTATTTCGTTGCTTAAG+AGG | 0.440046 | 6:+3118968 | MsaT030140.1:CDS |
| TGGTTGGAGCAGGATAGATT+TGG | 0.440326 | 6:+3118012 | MsaT030140.1:CDS |
| ATTCGGGTTCCCACATTTGT+TGG | 0.440715 | 6:-3119935 | None:intergenic |
| TTCCATTGGCCGACTGTACT+GGG | 0.440743 | 6:+3123481 | MsaT030140.1:CDS |
| GAGAGTTATTTCCCAAAAGT+TGG | 0.441057 | 6:+3117765 | MsaT030140.1:CDS |
| GAAGGATTAAGGCCAGTTGC+TGG | 0.443275 | 6:+3117640 | MsaT030140.1:CDS |
| TTCTTGAGGCATATGATTTG+AGG | 0.443296 | 6:-3123270 | None:intergenic |
| GTTCCCTTCCTGGTGTGGTT+GGG | 0.443556 | 6:+3119011 | MsaT030140.1:CDS |
| TCACAGCTCCAGATGCCCTT+TGG | 0.444012 | 6:-3116517 | None:intergenic |
| TCTGAAGCTCCCTGTTCGTC+GGG | 0.446074 | 6:+3123442 | MsaT030140.1:CDS |
| TCCTGTGGAACCTGATGGAC+AGG | 0.447709 | 6:-3118639 | None:intergenic |
| TTGTAGTCCTGCTTCAGATA+AGG | 0.447738 | 6:+3124697 | MsaT030140.1:CDS |
| TATTGAATTGAACCAGCAAC+TGG | 0.447810 | 6:-3117652 | None:intergenic |
| CGATTGGGCAAGGAAAATAC+TGG | 0.448932 | 6:+3119997 | MsaT030140.1:CDS |
| AAGGAAGCCGGAAGTCAAAC+AGG | 0.449256 | 6:+3125457 | MsaT030140.1:CDS |
| GAAAGGATGGTTGACCCATC+TGG | 0.450128 | 6:-3117440 | None:intergenic |
| CACTGAAGCACCAAATTGAT+TGG | 0.450357 | 6:-3116456 | None:intergenic |
| ATGAACACACCTTCTGATTC+GGG | 0.450634 | 6:-3119951 | None:intergenic |
| TGGCTAACGCATTAAGTGGT+TGG | 0.451140 | 6:-3123691 | None:intergenic |
| ATATCTGAAGCCTGTCCATC+AGG | 0.452265 | 6:+3118629 | MsaT030140.1:CDS |
| ATCTGCAACGACTATATATG+AGG | 0.452446 | 6:+3124901 | MsaT030140.1:CDS |
| ATGTTTCCTAGAAGGCCATA+TGG | 0.454079 | 6:-3124067 | None:intergenic |
| ACCACCAATCCTAGTGGTCT+TGG | 0.455040 | 6:+3123053 | MsaT030140.1:CDS |
| CATATTCAACCTTCAATAAC+GGG | 0.456122 | 6:+3116480 | MsaT030140.1:CDS |
| CCTTCCTGGTGTGGTTGGGA+TGG | 0.456214 | 6:+3119015 | MsaT030140.1:CDS |
| ATGTATCTTCAAAGTTAAAT+GGG | 0.456409 | 6:-3124343 | None:intergenic |
| GGTTCCCTTCCTGGTGTGGT+TGG | 0.457274 | 6:+3119010 | MsaT030140.1:CDS |
| ATTTGAGGATGGAAAAGACT+TGG | 0.459158 | 6:-3123255 | None:intergenic |
| AATTATCTGGGGCTACCGTC+TGG | 0.462972 | 6:+3116800 | MsaT030140.1:CDS |
| GATACGGAAGGCACAAAGGA+TGG | 0.463863 | 6:-3124440 | None:intergenic |
| ATCAATGGCTAGAAGCTTTG+AGG | 0.465332 | 6:+3116586 | MsaT030140.1:CDS |
| GCAATCGAAAGTGGCTGCTC+TGG | 0.465598 | 6:+3118742 | MsaT030140.1:CDS |
| TAAAGAATGACTGGTGGTAC+TGG | 0.465835 | 6:+3125256 | MsaT030140.1:CDS |
| TACTGTCCATCTTGTATTGG+TGG | 0.465873 | 6:+3121784 | MsaT030140.1:CDS |
| ACTGAGAGATTCCATTATGC+TGG | 0.466320 | 6:+3123802 | MsaT030140.1:CDS |
| TGGAGAGGCTCGGACAAGAC+GGG | 0.466479 | 6:+3118784 | MsaT030140.1:CDS |
| CATACATAATGGCTGAATCA+AGG | 0.466878 | 6:-3125341 | None:intergenic |
| GTAAAATTTGTGGCATCGAT+AGG | 0.467283 | 6:+3121665 | MsaT030140.1:CDS |
| GAAAACCGATGTCCACCTCC+TGG | 0.467814 | 6:+3118258 | MsaT030140.1:CDS |
| AGAAAAGAATCCGCCCGATT+GGG | 0.470485 | 6:+3119982 | MsaT030140.1:CDS |
| TCATCTTCTGTTGGTGCACA+AGG | 0.470713 | 6:-3117571 | None:intergenic |
| AGTTAGCAAGGCAGTGTACA+AGG | 0.471485 | 6:+3120027 | MsaT030140.1:CDS |
| ACGGGGAAGAAGGAAAGATA+TGG | 0.471607 | 6:+3118802 | MsaT030140.1:CDS |
| ATAACTCTCCATGCTGAGAA+TGG | 0.471961 | 6:-3117751 | None:intergenic |
| TAAGACTGTTCCTGTGGCTG+TGG | 0.472016 | 6:+3123208 | MsaT030140.1:CDS |
| GATCTTAGACCATCAATGAT+TGG | 0.472171 | 6:+3116710 | MsaT030140.1:CDS |
| TATGAAGTAGCTAATTATCT+GGG | 0.472232 | 6:+3116788 | MsaT030140.1:CDS |
| TATCAGGATGAAGTAATTCA+AGG | 0.472254 | 6:+3118189 | MsaT030140.1:CDS |
| GAGAAATCTGACAGGGGAAT+GGG | 0.472704 | 6:+3118569 | MsaT030140.1:CDS |
| CACTGGGGAAGTTGGTCTTA+AGG | 0.473437 | 6:+3122971 | MsaT030140.1:CDS |
| TCCTCCTTGAGACCATTAGT+TGG | 0.475292 | 6:+3124749 | MsaT030140.1:CDS |
| CTCGGACAAGACGGGGAAGA+AGG | 0.475810 | 6:+3118792 | MsaT030140.1:CDS |
| TTCTGAAGCTCCCTGTTCGT+CGG | 0.475981 | 6:+3123441 | MsaT030140.1:CDS |
| ACATTGTCACAATGTACCAC+TGG | 0.478072 | 6:+3122954 | MsaT030140.1:CDS |
| ATATGCCATGACCATAAATC+AGG | 0.478308 | 6:+3124578 | MsaT030140.1:CDS |
| AACCACACTCCCGTTATTGA+AGG | 0.478540 | 6:-3116489 | None:intergenic |
| GATGGTCTTAGAGCAGCTTT+CGG | 0.478934 | 6:-3124833 | None:intergenic |
| TAATGCACACACTGAAGGTC+AGG | 0.479408 | 6:+3123853 | MsaT030140.1:CDS |
| TTGGCAAACAAACAGGTCCT+TGG | 0.480182 | 6:-3123883 | None:intergenic |
| TGATGGTAATATTCCTGAAT+GGG | 0.480250 | 6:+3119883 | MsaT030140.1:CDS |
| TCTGCAAAACCATTGGCTGC+CGG | 0.480463 | 6:-3116914 | None:intergenic |
| AAACATGTTGAAAGTGAAAT+GGG | 0.482573 | 6:+3117841 | MsaT030140.1:CDS |
| ATCTGAAAGGCATGGTGTAC+TGG | 0.482745 | 6:+3116670 | MsaT030140.1:CDS |
| GACAGTACCAGTTTCCTTCA+GGG | 0.482911 | 6:-3121768 | None:intergenic |
| CTTAGAGAAGTGGTTGGAGC+AGG | 0.483078 | 6:+3118002 | MsaT030140.1:CDS |
| GCCTGTCCATCAGGTTCCAC+AGG | 0.484332 | 6:+3118638 | MsaT030140.1:CDS |
| CATGGAACATGTGAATGCTC+AGG | 0.484412 | 6:+3116994 | MsaT030140.1:CDS |
| GCCGGAAGTCAAACAGGAAA+AGG | 0.484768 | 6:+3125463 | MsaT030140.1:CDS |
| AAGATTGACCGAGTACGTTA+AGG | 0.485027 | 6:+3118236 | MsaT030140.1:CDS |
| ATTGGTCTTATTGGTTCAGA+TGG | 0.487746 | 6:+3124413 | MsaT030140.1:CDS |
| TAGTGAGATATTACGCTTGA+CGG | 0.488106 | 6:-3123384 | None:intergenic |
| TTCAAAGTTAAATGGGCAAG+AGG | 0.488498 | 6:-3124336 | None:intergenic |
| GCGTAATATCTCACTACTGC+AGG | 0.488535 | 6:+3123391 | MsaT030140.1:CDS |
| CGTGTATAATCACTAACAAA+AGG | 0.489100 | 6:-3124464 | None:intergenic |
| AGAAGAACATCTACTGATTG+AGG | 0.489114 | 6:-3124276 | None:intergenic |
| TTTGAGGATGGAAAAGACTT+GGG | 0.489221 | 6:-3123254 | None:intergenic |
| AGGATAACTATAAGATGTTA+GGG | 0.489368 | 6:+3123639 | MsaT030140.1:CDS |
| GTGGATCCAAATTCTGAGCC+TGG | 0.489485 | 6:+3118764 | MsaT030140.1:CDS |
| ATACGGAAGGCACAAAGGAT+GGG | 0.491135 | 6:-3124439 | None:intergenic |
| TATAAGGATTGTTCTTCTGA+TGG | 0.491628 | 6:+3116965 | MsaT030140.1:CDS |
| ACTAGCGCGTAGATATATCT+TGG | 0.491909 | 6:+3118886 | MsaT030140.1:CDS |
| AATGAGTTCAGTAGGAGCTC+TGG | 0.492551 | 6:-3118295 | None:intergenic |
| TTCAATAACGGGAGTGTGGT+TGG | 0.492563 | 6:+3116491 | MsaT030140.1:CDS |
| TCCCATCAACATCACTAGGC+GGG | 0.492591 | 6:-3112921 | None:intergenic |
| TGAGAAATCTGACAGGGGAA+TGG | 0.494095 | 6:+3118568 | MsaT030140.1:CDS |
| TCTGCATCCACCGTGATCAC+TGG | 0.495716 | 6:-3125426 | None:intergenic |
| TTCTTCTGATGGTTTAAGCA+TGG | 0.496070 | 6:+3116976 | MsaT030140.1:CDS |
| TTGGGAGTACAGTGTGGGAG+AGG | 0.496894 | 6:+3121945 | MsaT030140.1:CDS |
| TCCGAAAGCCCCTTGGGATG+AGG | 0.497364 | 6:+3121636 | MsaT030140.1:CDS |
| TGATACCCACTTCACTTCGT+TGG | 0.498451 | 6:+3117897 | MsaT030140.1:CDS |
| TGAGATTCCGAAAGCCCCTT+GGG | 0.498892 | 6:+3121630 | MsaT030140.1:CDS |
| ATGATGGTAATATTCCTGAA+TGG | 0.498952 | 6:+3119882 | MsaT030140.1:CDS |
| GTTGAATTTCCTATTCCAGA+TGG | 0.500899 | 6:+3117425 | MsaT030140.1:CDS |
| TAGAAAAGAATCCGCCCGAT+TGG | 0.501855 | 6:+3119981 | MsaT030140.1:CDS |
| TGTTAACCTTATCTTTCCTG+TGG | 0.502807 | 6:+3117300 | MsaT030140.1:CDS |
| TGTTTCCTAGAAGGCCATAT+GGG | 0.503701 | 6:-3124066 | None:intergenic |
| CAATGTACCACTGGGGAAGT+TGG | 0.505138 | 6:+3122963 | MsaT030140.1:CDS |
| CTGAGAGATTCCATTATGCT+GGG | 0.505425 | 6:+3123803 | MsaT030140.1:CDS |
| AGCAGTATCCAACTCAAAGA+AGG | 0.506348 | 6:-3123969 | None:intergenic |
| GAATCGAATATCTTTCCATC+AGG | 0.506522 | 6:-3116761 | None:intergenic |
| CTGGAGCACAGTGGTTTCCC+AGG | 0.507400 | 6:-3118276 | None:intergenic |
| GTCGAAAGCTTCACAAAGCC+AGG | 0.507525 | 6:+3124526 | MsaT030140.1:CDS |
| GAAACGTCTCTTTCTTCTGG+TGG | 0.508430 | 6:+3116854 | MsaT030140.1:CDS |
| CTGTAACCGTTTATTTCTTG+AGG | 0.508593 | 6:-3123284 | None:intergenic |
| CTATTGGCTAACGCATTAAG+TGG | 0.512733 | 6:-3123695 | None:intergenic |
| TATAACCCACAGGAAAGATA+AGG | 0.513001 | 6:-3117306 | None:intergenic |
| ACATATTCAACCTTCAATAA+CGG | 0.513159 | 6:+3116479 | MsaT030140.1:CDS |
| GTCTGCGGAGATTACTGCCC+GGG | 0.513262 | 6:+3118937 | MsaT030140.1:CDS |
| GTGTGGTTCCCTTCCTGGTG+TGG | 0.513693 | 6:+3119006 | MsaT030140.1:CDS |
| ATCGAAAGTGGCTGCTCTGG+TGG | 0.514121 | 6:+3118745 | MsaT030140.1:CDS |
| CACTGGTTTCGGTTCCGCTA+CGG | 0.514171 | 6:-3125409 | None:intergenic |
| TCCGATTTCTCAGATGATCC+AGG | 0.515931 | 6:+3125194 | MsaT030140.1:intron |
| TTTATATAGAAGGCCTAAGA+AGG | 0.518091 | 6:+3118212 | MsaT030140.1:CDS |
| CACAGTGGTTTCCCAGGAGG+TGG | 0.518947 | 6:-3118270 | None:intergenic |
| GCTTGACGGCATTGAGCTCA+AGG | 0.519161 | 6:-3123370 | None:intergenic |
| GCTGTTCTTCAGCATGGAAG+AGG | 0.519273 | 6:+3123551 | MsaT030140.1:CDS |
| GAGATTACTGCCCGGGAAAG+TGG | 0.520213 | 6:+3118944 | MsaT030140.1:CDS |
| GGAGTGTGGTTGGCTTCCAA+AGG | 0.521922 | 6:+3116501 | MsaT030140.1:CDS |
| TGAAATGGGCTTACATAGAT+GGG | 0.522698 | 6:+3117855 | MsaT030140.1:CDS |
| CCCAAGACCACTAGGATTGG+TGG | 0.522880 | 6:-3123054 | None:intergenic |
| CCTCCAGTGTAATTATTGCC+TGG | 0.524415 | 6:-3125212 | None:intergenic |
| GTGAGTGCCTAGAACCCATA+TGG | 0.524714 | 6:+3124052 | MsaT030140.1:CDS |
| CAGGAAAACACTGACGGAGC+TGG | 0.524887 | 6:+3124554 | MsaT030140.1:CDS |
| CCCTTAACCATAAAAGATGT+TGG | 0.525426 | 6:+3124488 | MsaT030140.1:CDS |
| ATTGAATCACACCCAATCAA+TGG | 0.525967 | 6:+3116571 | MsaT030140.1:CDS |
| TGTACTCATCCTAGAAGAAG+AGG | 0.526804 | 6:+3119820 | MsaT030140.1:CDS |
| AAAGCTTCTAGCCATTGATT+GGG | 0.527465 | 6:-3116582 | None:intergenic |
| TTTCTTTGGGAAAAGTTGAT+GGG | 0.527849 | 6:+3117260 | MsaT030140.1:CDS |
| GAAGAGGAGTCTGATGCAAA+TGG | 0.527892 | 6:+3119836 | MsaT030140.1:CDS |
| GAGGGAGTCTGTAAAATTTG+TGG | 0.528291 | 6:+3121655 | MsaT030140.1:CDS |
| CCGAAAGCCCCTTGGGATGA+GGG | 0.528516 | 6:+3121637 | MsaT030140.1:CDS |
| CTCAAGCTGCTGTCGTATCA+GGG | 0.528920 | 6:-3122817 | None:intergenic |
| TTTGTGAGCCAAACCAATGA+AGG | 0.528944 | 6:+3117482 | MsaT030140.1:CDS |
| CATATGCCTCAAGAAATAAA+CGG | 0.529074 | 6:+3123278 | MsaT030140.1:CDS |
| TACCTAGTGGTCGATCGTAA+AGG | 0.529229 | 6:+3118156 | MsaT030140.1:CDS |
| CCAAAATGCTGTTAATGAGT+CGG | 0.530410 | 6:+3123337 | MsaT030140.1:CDS |
| ATCACTAACAAAAGGAGATA+CGG | 0.531029 | 6:-3124456 | None:intergenic |
| ATTTGCCTGATTTATGGTCA+TGG | 0.531922 | 6:-3124583 | None:intergenic |
| GGTTTCGGTTCCGCTACGGC+AGG | 0.532046 | 6:-3125405 | None:intergenic |
| CGGAGTTCTTAAAGAATGAC+TGG | 0.532760 | 6:+3125247 | MsaT030140.1:CDS |
| GAAGCTCAATTGGCGAATGA+TGG | 0.533635 | 6:+3119866 | MsaT030140.1:CDS |
| TCATTGCCAACAGTGGAAAA+CGG | 0.533936 | 6:+3118132 | MsaT030140.1:CDS |
| TGCGTGGACTTTCTGTAGAG+TGG | 0.534468 | 6:+3122877 | MsaT030140.1:CDS |
| AGATTTAACAAATGCACGCC+AGG | 0.535505 | 6:-3124882 | None:intergenic |
| CCAATCTTAGATCAATAGTC+CGG | 0.535578 | 6:-3120944 | None:intergenic |
| ATGAGATTCCGAAAGCCCCT+TGG | 0.535949 | 6:+3121629 | MsaT030140.1:CDS |
| TTGAATTTCCTATTCCAGAT+GGG | 0.536011 | 6:+3117426 | MsaT030140.1:CDS |
| CAGTAATCTCCGCAGACTCC+AGG | 0.536115 | 6:-3118931 | None:intergenic |
| AGAGCTCCTACTGAACTCAT+TGG | 0.536252 | 6:+3118297 | MsaT030140.1:CDS |
| GAGATTAGAAGAAAAGAGAA+TGG | 0.536321 | 6:+3117037 | MsaT030140.1:CDS |
| CATTGTCACAATGTACCACT+GGG | 0.536412 | 6:+3122955 | MsaT030140.1:CDS |
| TGTGACACGTCCTGTTAGAG+TGG | 0.539006 | 6:+3116535 | MsaT030140.1:CDS |
| TTGGCTTTCTTGTCAATGGA+CGG | 0.539032 | 6:+3118905 | MsaT030140.1:CDS |
| GTTTACAGACTATGCTGAAG+TGG | 0.539133 | 6:+3121552 | MsaT030140.1:CDS |
| TCCCCGCCTAGTGATGTTGA+TGG | 0.539219 | 6:+3112919 | MsaT030140.1:CDS |
| GACAATGATTGTGCATTGAA+AGG | 0.539871 | 6:-3117457 | None:intergenic |
| TAAGATGTTAGGGCTGATGA+AGG | 0.540077 | 6:+3123649 | MsaT030140.1:CDS |
| TCTGGAATGCTGACAGATCC+AGG | 0.540185 | 6:-3117937 | None:intergenic |
| GGCACAGTTGGACAGAAGAC+AGG | 0.540516 | 6:+3124859 | MsaT030140.1:CDS |
| TTCGGTTCCGCTACGGCAGG+AGG | 0.540765 | 6:-3125402 | None:intergenic |
| AAACGTCTCTTTCTTCTGGT+GGG | 0.540774 | 6:+3116855 | MsaT030140.1:CDS |
| AGTTGGACAGAAGACAGGCC+TGG | 0.540957 | 6:+3124864 | MsaT030140.1:CDS |
| TAAAATTTGTGGCATCGATA+GGG | 0.540989 | 6:+3121666 | MsaT030140.1:CDS |
| TCAAAGTTAAATGGGCAAGA+GGG | 0.540998 | 6:-3124335 | None:intergenic |
| TCTTGGAACTCCAGCTATGG+TGG | 0.542147 | 6:+3120905 | MsaT030140.1:CDS |
| GCTTCTTGGAACTCCAGCTA+TGG | 0.542883 | 6:+3120902 | MsaT030140.1:CDS |
| CAGAAAACTACCAACAAATG+TGG | 0.543020 | 6:+3119925 | MsaT030140.1:CDS |
| AAAGACAATTAACTTGTCCC+TGG | 0.543508 | 6:-3121873 | None:intergenic |
| TCTTTGGGAATCTCTTCTGA+AGG | 0.543897 | 6:-3123095 | None:intergenic |
| CCATAAATCAGGCAAATCTA+CGG | 0.544598 | 6:+3124589 | MsaT030140.1:CDS |
| GCTTGAACCCTCCTCTTGCA+AGG | 0.545107 | 6:+3121743 | MsaT030140.1:CDS |
| AATCTAACTCATTGAACCAT+GGG | 0.545109 | 6:-3118541 | None:intergenic |
| TTTCGTTGCTTAAGAGGTGA+TGG | 0.546503 | 6:+3118974 | MsaT030140.1:CDS |
| CTTATAATTACTATTGACAA+AGG | 0.546981 | 6:-3116948 | None:intergenic |
| CTCAAGATGTCATCTTCTGT+TGG | 0.547220 | 6:-3117580 | None:intergenic |
| CATTGAAACTCCACAGCCAC+AGG | 0.548233 | 6:-3123218 | None:intergenic |
| TCAACTCCCTTATCTGAAGC+AGG | 0.548424 | 6:-3124704 | None:intergenic |
| TTGAGGATGGAAAAGACTTG+GGG | 0.549654 | 6:-3123253 | None:intergenic |
| TTCCGATTAATGAATTGACT+TGG | 0.550031 | 6:+3118858 | MsaT030140.1:CDS |
| GTTAACCTTATCTTTCCTGT+GGG | 0.550755 | 6:+3117301 | MsaT030140.1:CDS |
| CTCTTCCCATCAACATCACT+AGG | 0.551289 | 6:-3112925 | None:intergenic |
| ATGTCACCAATGAGTTCAGT+AGG | 0.551427 | 6:-3118303 | None:intergenic |
| TGGTACTGTCCATCTTGTAT+TGG | 0.551782 | 6:+3121781 | MsaT030140.1:CDS |
| CTTTGGGAGAAGAAAGAGAT+GGG | 0.552675 | 6:+3124663 | MsaT030140.1:CDS |
| CTGGAGAGGCTCGGACAAGA+CGG | 0.552858 | 6:+3118783 | MsaT030140.1:CDS |
| CAGGGATCCTTGCAAGAGGA+GGG | 0.553738 | 6:-3121750 | None:intergenic |
| TTCCCCTGTCAGATTTCTCA+GGG | 0.554494 | 6:-3118565 | None:intergenic |
| GGGGAAGTTGGTCTTAAGGA+AGG | 0.555159 | 6:+3122975 | MsaT030140.1:CDS |
| TCTAGAACTCCGGCAGCCAA+TGG | 0.555652 | 6:+3116905 | MsaT030140.1:CDS |
| TCAGGGATCCTTGCAAGAGG+AGG | 0.555665 | 6:-3121751 | None:intergenic |
| ATTTATCCAACGAAGTGAAG+TGG | 0.556030 | 6:-3117903 | None:intergenic |
| ATGATTGTGCATTGAAAGGA+TGG | 0.556350 | 6:-3117453 | None:intergenic |
| AGATTCCCAAAGAGAAGTGT+AGG | 0.556629 | 6:+3123105 | MsaT030140.1:CDS |
| GGAATGGGTGGAAGTTCACG+AGG | 0.557224 | 6:+3118584 | MsaT030140.1:CDS |
| GAAGCTCCTGTGGAACCTGA+TGG | 0.557576 | 6:-3118644 | None:intergenic |
| GAAATAAACGGTTACAGTGA+AGG | 0.557848 | 6:+3123290 | MsaT030140.1:CDS |
| TACCCCAAGACCACTAGGAT+TGG | 0.557877 | 6:-3123057 | None:intergenic |
| AAGACCATCAAAGGCACAGT+TGG | 0.558295 | 6:+3124847 | MsaT030140.1:CDS |
| TTACAGACTCCCTCATCCCA+AGG | 0.559666 | 6:-3121646 | None:intergenic |
| CCCCGCCTAGTGATGTTGAT+GGG | 0.559835 | 6:+3112920 | MsaT030140.1:CDS |
| TCTTCTGACAACGATGATGA+GGG | 0.560177 | 6:+3120879 | MsaT030140.1:CDS |
| TACAGACTCCCTCATCCCAA+GGG | 0.560262 | 6:-3121645 | None:intergenic |
| TTTATTAATGCACACACTGA+AGG | 0.561646 | 6:+3123848 | MsaT030140.1:CDS |
| TTCCTTTCAGTTGCTTGCGG+AGG | 0.562341 | 6:+3119757 | MsaT030140.1:intron |
| CAATGCATCTGGACCAACAA+AGG | 0.563151 | 6:+3120051 | MsaT030140.1:CDS |
| GCAAATAGAAGCAACACAGC+AGG | 0.563284 | 6:+3124623 | MsaT030140.1:CDS |
| CAGATAAATCCAAAGGAAGC+CGG | 0.563421 | 6:+3125445 | MsaT030140.1:CDS |
| TTGGCTTCTGGAGCTTATGG+TGG | 0.564019 | 6:+3120963 | MsaT030140.1:CDS |
| TTCTTCTGACAACGATGATG+AGG | 0.566118 | 6:+3120878 | MsaT030140.1:CDS |
| GCTTCCATCCCAACCACACC+AGG | 0.566416 | 6:-3119019 | None:intergenic |
| CTCTGATCCTCCTGCCGTAG+CGG | 0.566455 | 6:+3125395 | MsaT030140.1:CDS |
| TCCAAATTCTGAGCCTGGAG+AGG | 0.566584 | 6:+3118769 | MsaT030140.1:CDS |
| GCATTGAGCTCAAGGTGGTA+TGG | 0.567289 | 6:-3123362 | None:intergenic |
| AGAATCCGCCCGATTGGGCA+AGG | 0.568428 | 6:+3119987 | MsaT030140.1:CDS |
| CAAAGTTAAATGGGCAAGAG+GGG | 0.568693 | 6:-3124334 | None:intergenic |
| TGAGGCATATGATTTGAGGA+TGG | 0.570073 | 6:-3123266 | None:intergenic |
| AGCAGAATCCCAACAAGGGA+AGG | 0.570144 | 6:+3120730 | MsaT030140.1:CDS |
| AGAGCTGACACAGAAACAGC+TGG | 0.570523 | 6:+3124251 | MsaT030140.1:CDS |
| TGTATGAGCTCTTAGAGAAG+TGG | 0.570915 | 6:+3117992 | MsaT030140.1:CDS |
| CCCATCAACATCACTAGGCG+GGG | 0.572715 | 6:-3112920 | None:intergenic |
| ACTTTCCTTTCAGTTGCTTG+CGG | 0.574076 | 6:+3119754 | MsaT030140.1:intron |
| AAAATGGATCTTCTAAAGGA+AGG | 0.574855 | 6:+3124192 | MsaT030140.1:CDS |
| AGTCCGGAAGTCAAGAGGGC+GGG | 0.575469 | 6:-3120928 | None:intergenic |
| AGCTGCTCTAAGACCATCAA+AGG | 0.577332 | 6:+3124838 | MsaT030140.1:CDS |
| TACAGCAAATTGATGAGGGT+CGG | 0.578252 | 6:-3117065 | None:intergenic |
| ATGGTGTACTGGTGGAAGGT+TGG | 0.578597 | 6:+3116681 | MsaT030140.1:CDS |
| AACTCTCCATGCTGAGAATG+GGG | 0.578947 | 6:-3117749 | None:intergenic |
| ACTTCTCTAAGAGCTCATAC+AGG | 0.580636 | 6:-3117990 | None:intergenic |
| ATACATAATGGCTGAATCAA+GGG | 0.581133 | 6:-3125340 | None:intergenic |
| CACCAATCCTAGTGGTCTTG+GGG | 0.581148 | 6:+3123055 | MsaT030140.1:CDS |
| TACGGAAGGCACAAAGGATG+GGG | 0.581216 | 6:-3124438 | None:intergenic |
| GAGAAGTCCTTAAACTGCAG+AGG | 0.581340 | 6:-3117232 | None:intergenic |
| GAGTGTGGTTGGCTTCCAAA+GGG | 0.581411 | 6:+3116502 | MsaT030140.1:CDS |
| TGAAAGTTTATACAATGAGG+AGG | 0.582314 | 6:+3121427 | MsaT030140.1:CDS |
| TCAAATACCCCAAGACCACT+AGG | 0.585105 | 6:-3123062 | None:intergenic |
| AAATACTTTACCACTTTCCC+GGG | 0.585266 | 6:-3118954 | None:intergenic |
| GCAAGCGCTGTTCTTCAGCA+TGG | 0.585691 | 6:+3123545 | MsaT030140.1:CDS |
| CATCCCAACCACACCAGGAA+GGG | 0.585984 | 6:-3119014 | None:intergenic |
| AGCCCAGTACAGTCGGCCAA+TGG | 0.586306 | 6:-3123483 | None:intergenic |
| AGGTGAACTGCAATCGAAAG+TGG | 0.588031 | 6:+3118733 | MsaT030140.1:CDS |
| CCTTCAGGGATCCTTGCAAG+AGG | 0.588161 | 6:-3121754 | None:intergenic |
| AGGTTAACATCATAATATGA+AGG | 0.588196 | 6:-3117286 | None:intergenic |
| AGCAAGAGAAGGCAAAGTAG+AGG | 0.588285 | 6:-3125304 | None:intergenic |
| GCATTGTAAATTATCTGAGA+AGG | 0.588348 | 6:+3123619 | MsaT030140.1:CDS |
| ACTATACGTGAACGTCCTCT+GGG | 0.588536 | 6:-3123515 | None:intergenic |
| GTTTCCCAGGAGGTGGACAT+CGG | 0.589078 | 6:-3118263 | None:intergenic |
| CACTTACAGCAAATTGATGA+GGG | 0.589611 | 6:-3117069 | None:intergenic |
| AAAACCGATGTCCACCTCCT+GGG | 0.590169 | 6:+3118259 | MsaT030140.1:CDS |
| AGAATATTGGGAGTACAGTG+TGG | 0.591205 | 6:+3121939 | MsaT030140.1:CDS |
| ATTTCCCTGAGAAATCTGAC+AGG | 0.591419 | 6:+3118561 | MsaT030140.1:CDS |
| AAAGTTGGTCAATGCTTGCA+AGG | 0.591598 | 6:+3117780 | MsaT030140.1:CDS |
| TTTGGACCTTGAGTCTGAGA+TGG | 0.592414 | 6:-3116614 | None:intergenic |
| CGCACCAAAGCATCTGACAT+AGG | 0.593003 | 6:-3118669 | None:intergenic |
| AAATCTAACTCATTGAACCA+TGG | 0.593671 | 6:-3118542 | None:intergenic |
| GATCCAGGCAATAATTACAC+TGG | 0.593746 | 6:+3125209 | MsaT030140.1:CDS |
| CAGGAATCTATAAATAGCGT+AGG | 0.593945 | 6:+3123410 | MsaT030140.1:CDS |
| CAACAAGATTTATAACCCAC+AGG | 0.594509 | 6:-3117316 | None:intergenic |
| AAATCTGACAGGGGAATGGG+TGG | 0.594683 | 6:+3118572 | MsaT030140.1:CDS |
| GCAGTTTACTGTGCACCTGA+TGG | 0.594837 | 6:+3116746 | MsaT030140.1:CDS |
| GTGACACGTCCTGTTAGAGT+GGG | 0.595714 | 6:+3116536 | MsaT030140.1:CDS |
| AGAAGGAACTTATCAACCCA+TGG | 0.596599 | 6:+3118525 | MsaT030140.1:CDS |
| TCAAGCTCTTCTAAGAACAA+TGG | 0.597626 | 6:-3118503 | None:intergenic |
| GCAGTTGTTGCATTATTGGA+TGG | 0.597735 | 6:+3120690 | MsaT030140.1:CDS |
| GGAGAGGCTCGGACAAGACG+GGG | 0.598135 | 6:+3118785 | MsaT030140.1:CDS |
| GTTCTTAGAAGAGCTTGAGA+AGG | 0.598417 | 6:+3118508 | MsaT030140.1:CDS |
| TCACTTACAGCAAATTGATG+AGG | 0.598434 | 6:-3117070 | None:intergenic |
| AGTGAAGCATATGCATCAGA+AGG | 0.599098 | 6:+3117622 | MsaT030140.1:CDS |
| GAATATTGGGAGTACAGTGT+GGG | 0.599385 | 6:+3121940 | MsaT030140.1:CDS |
| TTTATCCAACGAAGTGAAGT+GGG | 0.601813 | 6:-3117902 | None:intergenic |
| AACCTTCAATAACGGGAGTG+TGG | 0.603058 | 6:+3116487 | MsaT030140.1:CDS |
| CAATAGTCCGGAAGTCAAGA+GGG | 0.603762 | 6:-3120932 | None:intergenic |
| GCAGTATCCAACTCAAAGAA+GGG | 0.605811 | 6:-3123968 | None:intergenic |
| CCAAAAGATCCCGACGAACA+GGG | 0.605897 | 6:-3123451 | None:intergenic |
| TGTTTACCACCAATACAAGA+TGG | 0.606600 | 6:-3121790 | None:intergenic |
| AGGAGATACGGAAGGCACAA+AGG | 0.606931 | 6:-3124444 | None:intergenic |
| GGGAAGTTGGTCTTAAGGAA+GGG | 0.608264 | 6:+3122976 | MsaT030140.1:CDS |
| TGAAACTGATTCAGAAATCG+AGG | 0.608634 | 6:+3123736 | MsaT030140.1:CDS |
| TAGCCAAAGCCCAGTACAGT+CGG | 0.609277 | 6:-3123490 | None:intergenic |
| TTTACAGACTATGCTGAAGT+GGG | 0.609344 | 6:+3121553 | MsaT030140.1:CDS |
| TCAATAGTCCGGAAGTCAAG+AGG | 0.610877 | 6:-3120933 | None:intergenic |
| ACCTAACTCTCTTGTTACAA+AGG | 0.611746 | 6:+3123916 | MsaT030140.1:CDS |
| AGAAAACTACCAACAAATGT+GGG | 0.611755 | 6:+3119926 | MsaT030140.1:CDS |
| TGAGGATGGAAAAGACTTGG+GGG | 0.612204 | 6:-3123252 | None:intergenic |
| AGCGGTCCCCATTCTCAGCA+TGG | 0.612548 | 6:+3117743 | MsaT030140.1:CDS |
| TCAGTTTCATAAACAATCCA+CGG | 0.612580 | 6:-3123722 | None:intergenic |
| TGGGATGGAAGCTGATGCAT+TGG | 0.613264 | 6:+3119030 | MsaT030140.1:CDS |
| GGACGGTAACCTGGAGTCTG+CGG | 0.613310 | 6:+3118922 | MsaT030140.1:CDS |
| AATGATAGTATGGATTTAGA+CGG | 0.613320 | 6:+3117518 | MsaT030140.1:CDS |
| AGTCTGCGGAGATTACTGCC+CGG | 0.613644 | 6:+3118936 | MsaT030140.1:CDS |
| TTATTGGATGGTGTAACTGA+TGG | 0.615863 | 6:+3120702 | MsaT030140.1:CDS |
| ACTGGAGCACTCAGTTAGCA+AGG | 0.616248 | 6:+3120015 | MsaT030140.1:CDS |
| GACATAGGAAGAAGCTCCTG+TGG | 0.616284 | 6:-3118654 | None:intergenic |
| TCCATAGAATTGTAGCCAGA+CGG | 0.616326 | 6:-3116815 | None:intergenic |
| CCATCCCAACCACACCAGGA+AGG | 0.617125 | 6:-3119015 | None:intergenic |
| ATGGAACATGTGAATGCTCA+GGG | 0.617560 | 6:+3116995 | MsaT030140.1:CDS |
| CGTTGCTTAAGAGGTGATGG+TGG | 0.618217 | 6:+3118977 | MsaT030140.1:CDS |
| AAGGATATCTGCAAGAAGAA+CGG | 0.618975 | 6:+3117799 | MsaT030140.1:CDS |
| TGAGCTCTTAGAGAAGTGGT+TGG | 0.619725 | 6:+3117996 | MsaT030140.1:CDS |
| ATTCTGAGCCTGGAGAGGCT+CGG | 0.620370 | 6:+3118774 | MsaT030140.1:CDS |
| AATGGGTGGAAGTTCACGAG+GGG | 0.621078 | 6:+3118586 | MsaT030140.1:CDS |
| AGGAAAAGGAAGGAATTGGA+TGG | 0.621504 | 6:+3125477 | MsaT030140.1:CDS |
| GGATTGGTGGTTGTAGCATG+TGG | 0.622105 | 6:-3123041 | None:intergenic |
| AAATCGAGGAGCTATTGGGT+TGG | 0.623917 | 6:+3123750 | MsaT030140.1:CDS |
| GAAGTACCATCTCAGACTCA+AGG | 0.624744 | 6:+3116608 | MsaT030140.1:CDS |
| ATGGGTGGAAGTTCACGAGG+GGG | 0.625342 | 6:+3118587 | MsaT030140.1:CDS |
| GACCTTTACGATCGACCACT+AGG | 0.625630 | 6:-3118158 | None:intergenic |
| ATGTGGGAACCCGAATCAGA+AGG | 0.625738 | 6:+3119942 | MsaT030140.1:CDS |
| GAAGTCAAACAGGAAAAGGA+AGG | 0.626065 | 6:+3125467 | MsaT030140.1:CDS |
| CAGTCTTGCACACCAAGAAG+CGG | 0.626876 | 6:-3118069 | None:intergenic |
| CTTCTGACAACGATGATGAG+GGG | 0.629551 | 6:+3120880 | MsaT030140.1:CDS |
| GAGCACAGTGGTTTCCCAGG+AGG | 0.630512 | 6:-3118273 | None:intergenic |
| GAATTAAATCAGAAGTTGCG+TGG | 0.631539 | 6:+3122861 | MsaT030140.1:CDS |
| GGTGATGGTGGTTTGCTGTG+TGG | 0.634647 | 6:+3118989 | MsaT030140.1:CDS |
| CCTCTTGCAAGGATCCCTGA+AGG | 0.634782 | 6:+3121754 | MsaT030140.1:CDS |
| TGAAAGGCATGGTGTACTGG+TGG | 0.634808 | 6:+3116673 | MsaT030140.1:CDS |
| CCAGGCAATAATTACACTGG+AGG | 0.638626 | 6:+3125212 | MsaT030140.1:CDS |
| TCTTTGGGAGAAGAAAGAGA+TGG | 0.639912 | 6:+3124662 | MsaT030140.1:CDS |
| GGAACCGAAACCAGTGATCA+CGG | 0.640900 | 6:+3125416 | MsaT030140.1:CDS |
| TAGCTCTTCATTGCCAACAG+TGG | 0.645368 | 6:+3118125 | MsaT030140.1:CDS |
| ACACACTGAAGGTCAGGTTG+AGG | 0.646574 | 6:+3123859 | MsaT030140.1:CDS |
| GAATGGGTGGAAGTTCACGA+GGG | 0.647155 | 6:+3118585 | MsaT030140.1:CDS |
| ACTGGAGGATATGATTAAGA+CGG | 0.651632 | 6:+3125227 | MsaT030140.1:CDS |
| AATGGTCTCAAGGAGGACAA+AGG | 0.653684 | 6:-3124743 | None:intergenic |
| TATATGCGAAGAGCAAGAGA+AGG | 0.654474 | 6:-3125315 | None:intergenic |
| AAAGATGTTGGCGTTGCTGG+TGG | 0.654656 | 6:+3124500 | MsaT030140.1:CDS |
| AAGATGTTAGGGCTGATGAA+GGG | 0.655905 | 6:+3123650 | MsaT030140.1:CDS |
| GTGGATGCAGATAAATCCAA+AGG | 0.656488 | 6:+3125438 | MsaT030140.1:CDS |
| CAGTGAAGGACAATGTGTGC+CGG | 0.658251 | 6:+3123304 | MsaT030140.1:CDS |
| GTTAGCAAGGCAGTGTACAA+GGG | 0.661893 | 6:+3120028 | MsaT030140.1:CDS |
| TTCCCATCAACATCACTAGG+CGG | 0.664241 | 6:-3112922 | None:intergenic |
| TAGTCCGGAAGTCAAGAGGG+CGG | 0.667566 | 6:-3120929 | None:intergenic |
| AGGCATGGTGTACTGGTGGA+AGG | 0.669238 | 6:+3116677 | MsaT030140.1:CDS |
| AGCATATTGATCTTGGTCCG+CGG | 0.672520 | 6:-3118836 | None:intergenic |
| CTGCGCGACGTAACACAATG+CGG | 0.673592 | 6:-3120800 | None:intergenic |
| GTTTCTCAGGAAAACACTGA+CGG | 0.677981 | 6:+3124548 | MsaT030140.1:CDS |
| GGGAGTTGATGGTTGCTGTG+TGG | 0.679375 | 6:+3124718 | MsaT030140.1:CDS |
| GGGAAGAGTTGCATGAATCG+AGG | 0.681694 | 6:+3112940 | MsaT030140.1:CDS |
| AGTGCAGCAGAATCCCAACA+AGG | 0.682264 | 6:+3120725 | MsaT030140.1:CDS |
| TTTCCCTGAGAAATCTGACA+GGG | 0.684464 | 6:+3118562 | MsaT030140.1:CDS |
| TGAGAGATTCCATTATGCTG+GGG | 0.684537 | 6:+3123804 | MsaT030140.1:CDS |
| ACAGACTCCCTCATCCCAAG+GGG | 0.688226 | 6:-3121644 | None:intergenic |
| ATGAAGTAGCTAATTATCTG+GGG | 0.689150 | 6:+3116789 | MsaT030140.1:CDS |
| GTGCAGCAGAATCCCAACAA+GGG | 0.692761 | 6:+3120726 | MsaT030140.1:CDS |
| GAAGGTCAGGTTGAGGACCA+AGG | 0.693792 | 6:+3123866 | MsaT030140.1:CDS |
| AGTGGAAAACGGTTACCTAG+TGG | 0.696235 | 6:+3118143 | MsaT030140.1:CDS |
| CTTAAGACCAACTTCCCCAG+TGG | 0.697021 | 6:-3122970 | None:intergenic |
| CTAACAAAAGGAGATACGGA+AGG | 0.697843 | 6:-3124452 | None:intergenic |
| ACAGCTTAAGACTGTTCCTG+TGG | 0.697913 | 6:+3123202 | MsaT030140.1:CDS |
| ATATGGATAGTGCAGTTCCG+CGG | 0.698028 | 6:+3118819 | MsaT030140.1:CDS |
| TCCAACTAATGGTCTCAAGG+AGG | 0.703300 | 6:-3124750 | None:intergenic |
| TGTGACAAATGATTCCAACA+AGG | 0.705234 | 6:+3124376 | MsaT030140.1:CDS |
| TGGGCTTTGGCTACACCCAG+AGG | 0.706801 | 6:+3123500 | MsaT030140.1:CDS |
| TTCCCTGAGAAATCTGACAG+GGG | 0.713734 | 6:+3118563 | MsaT030140.1:CDS |
| GCTACAACCACCAATCCTAG+TGG | 0.715473 | 6:+3123047 | MsaT030140.1:CDS |
| CGTTAGCCAATAGTTCACCG+TGG | 0.733819 | 6:+3123705 | MsaT030140.1:CDS |
| AGTTCTTAAAGAATGACTGG+TGG | 0.737756 | 6:+3125250 | MsaT030140.1:CDS |
| TGACGGCATTGAGCTCAAGG+TGG | 0.738272 | 6:-3123367 | None:intergenic |
| GTAGGAGCTCTGGAGCACAG+TGG | 0.745680 | 6:-3118285 | None:intergenic |
| ACCGAAACCAGTGATCACGG+TGG | 0.789385 | 6:+3125419 | MsaT030140.1:CDS |
| ATTGTCACAATGTACCACTG+GGG | 0.815271 | 6:+3122956 | MsaT030140.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 3112892 | 3125503 | 3112892 | ID=MsaG030140 |
| Chr6 | mRNA | 3112892 | 3125503 | 3112892 | ID=MsaT030140.1;Parent=MsaG030140 |
| Chr6 | exon | 3112892 | 3112961 | 3112892 | ID=MsaT030140.1.exon1;Parent=MsaT030140.1 |
| Chr6 | CDS | 3112892 | 3112961 | 3112892 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3116402 | 3117084 | 3116402 | ID=MsaT030140.1.exon2;Parent=MsaT030140.1 |
| Chr6 | CDS | 3116402 | 3117084 | 3116402 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3117223 | 3117334 | 3117223 | ID=MsaT030140.1.exon3;Parent=MsaT030140.1 |
| Chr6 | CDS | 3117223 | 3117334 | 3117223 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3117375 | 3117539 | 3117375 | ID=MsaT030140.1.exon4;Parent=MsaT030140.1 |
| Chr6 | CDS | 3117375 | 3117539 | 3117375 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3117569 | 3118332 | 3117569 | ID=MsaT030140.1.exon5;Parent=MsaT030140.1 |
| Chr6 | CDS | 3117569 | 3118332 | 3117569 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3118455 | 3119051 | 3118455 | ID=MsaT030140.1.exon6;Parent=MsaT030140.1 |
| Chr6 | CDS | 3118455 | 3119051 | 3118455 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3119767 | 3120072 | 3119767 | ID=MsaT030140.1.exon7;Parent=MsaT030140.1 |
| Chr6 | CDS | 3119767 | 3120072 | 3119767 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3120687 | 3121019 | 3120687 | ID=MsaT030140.1.exon8;Parent=MsaT030140.1 |
| Chr6 | CDS | 3120687 | 3121019 | 3120687 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3121350 | 3121448 | 3121350 | ID=MsaT030140.1.exon9;Parent=MsaT030140.1 |
| Chr6 | CDS | 3121350 | 3121448 | 3121350 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3121532 | 3121966 | 3121532 | ID=MsaT030140.1.exon10;Parent=MsaT030140.1 |
| Chr6 | CDS | 3121532 | 3121966 | 3121532 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3122771 | 3123978 | 3122771 | ID=MsaT030140.1.exon11;Parent=MsaT030140.1 |
| Chr6 | CDS | 3122771 | 3123978 | 3122771 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3124023 | 3124127 | 3124023 | ID=MsaT030140.1.exon12;Parent=MsaT030140.1 |
| Chr6 | CDS | 3124023 | 3124127 | 3124023 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3124181 | 3124922 | 3124181 | ID=MsaT030140.1.exon13;Parent=MsaT030140.1 |
| Chr6 | CDS | 3124181 | 3124922 | 3124181 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Chr6 | exon | 3125207 | 3125503 | 3125207 | ID=MsaT030140.1.exon14;Parent=MsaT030140.1 |
| Chr6 | CDS | 3125207 | 3125503 | 3125207 | ID=cds.MsaT030140.1;Parent=MsaT030140.1 |
| Gene Sequence |
| Protein sequence |