AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG030310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG030310 MtrunA17_Chr6g0449401 91.304 667 20 2 1 629 13 679 0.0 1226
MsaG030310 MtrunA17_Chr7g0227331 69.051 643 160 14 1 629 1 618 0.0 832
MsaG030310 MtrunA17_Chr2g0290691 69.168 493 129 5 159 629 113 604 0.0 706
MsaG030310 MtrunA17_Chr7g0250631 61.493 509 167 7 148 629 255 761 0.0 622
MsaG030310 MtrunA17_Chr8g0335351 66.667 462 142 6 148 599 261 720 0.0 610
MsaG030310 MtrunA17_Chr7g0266031 59.436 461 174 6 148 600 388 843 0.0 545
MsaG030310 MtrunA17_Chr1g0179101 64.165 413 140 4 192 600 413 821 0.0 545
MsaG030310 MtrunA17_Chr8g0356291 61.962 418 149 6 189 600 65 478 3.32e-178 516
MsaG030310 MtrunA17_Chr3g0080101 58.613 447 163 7 163 601 337 769 7.65e-178 525
MsaG030310 MtrunA17_Chr2g0309421 57.718 447 162 7 204 629 131 571 1.23e-177 516
MsaG030310 MtrunA17_Chr4g0063311 53.623 414 165 7 221 615 62 467 1.73e-146 433
MsaG030310 MtrunA17_Chr2g0321101 52.987 385 145 7 229 593 66 434 2.17e-128 386
MsaG030310 MtrunA17_Chr2g0285711 46.188 446 201 8 200 629 32 454 1.31e-123 373
MsaG030310 MtrunA17_Chr8g0381091 47.805 410 182 6 225 620 52 443 2.29e-121 367
MsaG030310 MtrunA17_Chr2g0312641 43.269 416 193 11 198 599 33 419 1.60e-111 343
MsaG030310 MtrunA17_Chr4g0030361 46.667 375 153 4 225 599 282 609 2.94e-109 342
MsaG030310 MtrunA17_Chr8g0369091 45.153 392 169 3 225 614 572 919 4.62e-108 347
MsaG030310 MtrunA17_Chr2g0327561 47.467 375 161 2 225 599 601 939 3.63e-106 343
MsaG030310 MtrunA17_Chr8g0338741 38.765 405 183 13 247 625 15 380 1.05e-78 256
MsaG030310 MtrunA17_Chr2g0329011 38.719 359 178 7 247 600 12 333 2.60e-74 243
MsaG030310 MtrunA17_Chr4g0032761 36.772 378 197 8 247 600 10 369 1.59e-72 239
MsaG030310 MtrunA17_Chr7g0234641 34.656 378 220 7 247 615 8 367 1.37e-67 226
MsaG030310 MtrunA17_Chr4g0018201 35.000 360 181 7 252 610 759 1066 8.24e-58 211
MsaG030310 MtrunA17_Chr5g0428981 34.722 360 182 7 252 610 763 1070 1.13e-57 210
MsaG030310 MtrunA17_Chr6g0478601 33.994 353 189 8 249 600 108 417 3.96e-56 198
MsaG030310 MtrunA17_Chr3g0135951 31.387 411 233 13 185 588 38 406 6.92e-50 181
MsaG030310 MtrunA17_Chr1g0153321 30.726 358 205 8 240 591 96 416 4.25e-48 176
MsaG030310 MtrunA17_Chr2g0299781 27.273 473 288 11 161 627 30 452 5.56e-47 173
MsaG030310 MtrunA17_Chr1g0187581 31.755 359 194 10 252 599 117 435 2.10e-46 172
MsaG030310 MtrunA17_Chr1g0167351 31.148 366 208 10 243 599 99 429 9.20e-46 170
MsaG030310 MtrunA17_Chr1g0167311 30.729 384 223 12 225 601 85 432 2.72e-45 168
MsaG030310 MtrunA17_Chr1g0183651 30.518 367 211 9 240 599 108 437 5.78e-45 168
MsaG030310 MtrunA17_Chr7g0261491 29.469 414 234 13 197 599 75 441 4.44e-43 163
MsaG030310 MtrunA17_Chr7g0245031 39.865 148 87 1 252 399 148 293 6.02e-27 114
MsaG030310 MtrunA17_Chr7g0245031 38.129 139 83 2 451 588 273 409 8.52e-21 95.9
MsaG030310 MtrunA17_Chr4g0059751 37.580 157 85 3 252 399 89 241 3.79e-26 111
MsaG030310 MtrunA17_Chr4g0059751 37.288 118 71 2 477 593 247 362 7.34e-21 95.5
MsaG030310 MtrunA17_Chr1g0197721 32.796 186 122 2 239 424 38 220 5.37e-24 105
MsaG030310 MtrunA17_Chr1g0197721 33.577 137 85 3 464 599 203 334 1.47e-11 67.0
MsaG030310 MtrunA17_Chr3g0140631 34.286 175 108 2 249 418 34 206 2.50e-21 95.1
MsaG030310 MtrunA17_Chr3g0140631 35.185 108 66 1 476 583 185 288 2.51e-15 77.0
MsaG030310 MtrunA17_Chr8g0351491 26.239 343 173 8 241 583 5 267 2.89e-21 94.4
MsaG030310 MtrunA17_Chr3g0125381 40.541 111 62 1 473 583 100 206 1.29e-20 90.9
MsaG030310 MtrunA17_Chr3g0125381 28.814 177 112 5 302 468 2 174 5.66e-11 62.8
MsaG030310 MtrunA17_Chr3g0132591 26.748 329 152 8 258 583 118 360 1.79e-19 91.7
MsaG030310 MtrunA17_Chr2g0286501 35.948 153 90 3 249 401 46 190 5.57e-18 88.6
MsaG030310 MtrunA17_Chr3g0114511 29.897 194 121 4 244 428 24 211 6.96e-18 86.7
MsaG030310 MtrunA17_Chr7g0244521 25.073 343 174 11 244 583 4 266 8.77e-18 86.7
MsaG030310 MtrunA17_Chr4g0013131 24.169 331 170 11 243 569 3 256 1.36e-17 85.9
MsaG030310 MtrunA17_Chr3g0107051 35.099 151 95 2 249 399 18 165 1.48e-17 85.9
MsaG030310 MtrunA17_Chr8g0353621 31.285 179 116 2 252 425 10 186 2.20e-17 82.8
MsaG030310 MtrunA17_Chr8g0353621 40.196 102 57 1 482 583 164 261 7.33e-16 78.2
MsaG030310 MtrunA17_Chr8g0379091 32.680 153 100 1 247 399 21 170 2.27e-17 85.5
MsaG030310 MtrunA17_Chr6g0453681 24.850 334 172 9 251 584 18 272 2.78e-17 85.1
MsaG030310 MtrunA17_Chr1g0188031 32.704 159 91 4 249 399 17 167 3.82e-17 84.3
MsaG030310 MtrunA17_Chr6g0468751 24.925 333 171 9 251 583 18 271 4.09e-17 84.7
MsaG030310 MtrunA17_Chr1g0205421 32.704 159 100 3 243 399 3 156 4.20e-17 84.3
MsaG030310 MtrunA17_Chr2g0284031 32.026 153 101 1 247 399 26 175 4.69e-17 84.7
MsaG030310 MtrunA17_Chr3g0132671 24.793 363 164 11 251 583 18 301 4.74e-17 84.7
MsaG030310 MtrunA17_Chr2g0302431 30.864 162 110 2 238 399 6 165 1.02e-16 83.2
MsaG030310 MtrunA17_Chr5g0432491 34.437 151 97 2 249 399 20 168 1.58e-16 82.4
MsaG030310 MtrunA17_Chr8g0346071 23.782 349 177 13 238 583 8 270 2.33e-16 82.0
MsaG030310 MtrunA17_Chr2g0321841 28.655 171 113 5 249 413 1 168 2.42e-16 83.2
MsaG030310 MtrunA17_Chr2g0284011 25.000 304 151 8 244 544 4 233 3.75e-16 81.3
MsaG030310 MtrunA17_Chr4g0074111 24.188 277 135 7 250 524 16 219 4.59e-16 80.5
MsaG030310 MtrunA17_Chr4g0025671 28.387 155 105 3 248 399 4 155 4.77e-16 82.4
MsaG030310 MtrunA17_Chr1g0190831 28.387 155 103 3 249 399 1 151 9.94e-16 80.9
MsaG030310 MtrunA17_Chr3g0107011 29.801 151 103 1 249 399 11 158 1.16e-15 80.1
MsaG030310 MtrunA17_Chr5g0428031 29.605 152 105 2 248 399 5 154 1.21e-15 79.7
MsaG030310 MtrunA17_Chr4g0063881 30.263 152 104 1 248 399 7 156 1.92e-15 79.3
MsaG030310 MtrunA17_Chr2g0330211 23.416 363 205 11 247 595 13 316 2.30e-15 79.3
MsaG030310 MtrunA17_Chr7g0258051 25.581 172 119 4 248 413 12 180 3.76e-15 79.0
MsaG030310 MtrunA17_Chr1g0173921 28.571 154 104 3 249 399 1 151 4.42e-15 79.3
MsaG030310 MtrunA17_Chr5g0432471 22.121 330 172 10 249 572 9 259 5.87e-15 77.8
MsaG030310 MtrunA17_Chr7g0272841 30.688 189 114 6 252 432 68 247 1.51e-14 77.0
MsaG030310 MtrunA17_Chr2g0304111 29.560 159 105 3 241 399 17 168 2.41e-14 75.9
MsaG030310 MtrunA17_Chr6g0486661 35.433 127 72 5 479 599 912 1034 3.17e-14 76.6
MsaG030310 MtrunA17_Chr8g0385341 33.333 153 96 4 252 400 30 180 3.19e-14 75.5
MsaG030310 MtrunA17_Chr1g0185221 26.316 171 117 4 249 413 1 168 6.22e-14 75.1
MsaG030310 MtrunA17_Chr3g0091311 30.128 156 106 2 244 399 4 156 7.30e-14 72.0
MsaG030310 MtrunA17_Chr7g0274941 30.323 155 103 3 244 396 8 159 8.48e-14 72.4
MsaG030310 MtrunA17_Chr7g0274941 35.922 103 59 3 484 583 176 274 6.88e-11 63.9
MsaG030310 MtrunA17_Chr5g0441011 30.864 162 101 5 240 399 6 158 8.96e-14 73.9
MsaG030310 MtrunA17_Chr7g0260191 26.623 154 107 3 249 399 1 151 9.75e-14 74.3
MsaG030310 MtrunA17_Chr2g0333821 22.823 333 180 9 252 584 14 269 1.04e-13 73.6
MsaG030310 MtrunA17_Chr5g0419441 28.947 152 105 2 252 403 239 387 1.29e-13 74.3
MsaG030310 MtrunA17_Chr1g0200601 31.818 154 99 4 251 400 29 180 1.35e-13 73.6
MsaG030310 MtrunA17_Chr1g0166101 30.380 158 95 3 249 399 21 170 1.50e-13 73.2
MsaG030310 MtrunA17_Chr1g0205931 29.018 224 126 9 240 449 53 257 1.56e-13 73.9
MsaG030310 MtrunA17_Chr5g0409421 26.176 340 193 12 249 585 1 285 1.64e-13 73.2
MsaG030310 MtrunA17_Chr4g0001331 30.921 152 97 3 248 399 21 164 2.10e-13 72.8
MsaG030310 MtrunA17_Chr1g0202831 28.402 169 111 3 240 403 399 562 2.16e-13 73.6
MsaG030310 MtrunA17_Chr1g0170551 33.019 106 65 2 482 587 162 261 2.21e-13 73.9
MsaG030310 MtrunA17_Chr1g0170551 29.375 160 109 3 252 411 7 162 5.59e-12 69.3
MsaG030310 MtrunA17_Chr2g0317001 27.632 152 106 2 252 403 15 162 2.35e-13 73.6
MsaG030310 MtrunA17_Chr1g0150321 31.126 151 101 2 249 399 10 157 3.02e-13 72.0
MsaG030310 MtrunA17_Chr7g0256001 30.435 184 113 6 251 427 140 315 3.03e-13 72.8
MsaG030310 MtrunA17_Chr8g0346081 28.302 159 107 3 241 399 11 162 4.68e-13 71.6
MsaG030310 MtrunA17_Chr8g0339221 26.494 385 216 16 249 624 1 327 6.35e-13 71.2
MsaG030310 MtrunA17_Chr1g0176421 30.337 178 115 5 252 427 161 331 8.22e-13 71.6
MsaG030310 MtrunA17_Chr3g0130151 30.675 163 107 5 250 409 242 401 8.30e-13 71.6
MsaG030310 MtrunA17_Chr8g0345801 32.374 139 87 4 249 385 12 145 1.03e-12 68.9
MsaG030310 MtrunA17_Chr1g0170281 31.677 161 100 5 248 400 110 268 1.36e-12 70.9
MsaG030310 MtrunA17_Chr1g0203881 30.622 209 133 6 256 455 45 250 1.77e-12 70.1
MsaG030310 MtrunA17_Chr3g0091281 25.442 283 133 9 244 523 4 211 1.96e-12 67.4
MsaG030310 MtrunA17_Chr5g0448721 29.050 179 118 5 256 432 100 271 2.05e-12 70.1
MsaG030310 MtrunA17_Chr8g0374701 29.697 165 102 5 267 427 148 302 4.16e-12 69.3
MsaG030310 MtrunA17_Chr2g0317501 31.579 171 108 6 234 399 114 280 4.21e-12 69.3
MsaG030310 MtrunA17_Chr4g0008561 27.273 176 111 6 415 584 113 277 4.38e-12 69.3
MsaG030310 MtrunA17_Chr8g0384301 26.882 186 123 5 249 431 296 471 5.00e-12 68.9
MsaG030310 MtrunA17_Chr3g0133541 31.579 152 101 2 250 399 305 455 5.69e-12 68.9
MsaG030310 MtrunA17_Chr5g0441691 29.444 180 114 5 252 427 68 238 9.13e-12 67.8
MsaG030310 MtrunA17_Chr1g0173541 32.051 156 100 4 249 400 49 202 1.04e-11 67.8
MsaG030310 MtrunA17_Chr4g0047191 30.693 101 70 0 299 399 94 194 1.88e-11 66.2
MsaG030310 MtrunA17_Chr4g0047211 30.693 101 70 0 299 399 89 189 2.26e-11 65.9
MsaG030310 MtrunA17_Chr4g0074811 32.680 153 97 5 252 400 91 241 2.33e-11 66.6
MsaG030310 MtrunA17_Chr1g0201571 32.026 153 93 6 252 399 126 272 2.33e-11 66.6
MsaG030310 MtrunA17_Chr0c02g0489761 29.444 180 114 5 252 427 78 248 2.59e-11 66.6
MsaG030310 MtrunA17_Chr3g0129721 32.051 156 93 6 251 399 23 172 2.72e-11 65.1
MsaG030310 MtrunA17_Chr5g0444171 30.065 153 101 4 252 400 92 242 2.90e-11 66.2
MsaG030310 MtrunA17_Chr4g0045261 29.412 153 96 4 279 427 167 311 3.45e-11 66.2
MsaG030310 MtrunA17_Chr3g0091421 30.573 157 102 4 245 399 5 156 3.95e-11 63.5
MsaG030310 MtrunA17_Chr7g0257751 31.373 153 99 4 252 400 58 208 4.31e-11 65.9
MsaG030310 MtrunA17_Chr7g0252301 29.814 161 106 3 250 407 853 1009 7.09e-11 65.9
MsaG030310 MtrunA17_Chr3g0131181 31.544 149 96 4 256 400 33 179 8.18e-11 64.7
MsaG030310 MtrunA17_Chr5g0402551 27.660 188 121 6 252 432 134 313 8.23e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG030310 AT5G47750.1 69.231 494 124 7 159 629 98 586 0.0 687
MsaG030310 AT4G26610.1 69.121 489 140 6 148 629 22 506 0.0 671
MsaG030310 AT5G55910.2 68.496 492 136 7 151 629 13 498 0.0 661
MsaG030310 AT5G55910.1 68.496 492 136 7 151 629 13 498 0.0 661
MsaG030310 AT3G27580.2 66.537 514 133 7 140 629 80 578 0.0 657
MsaG030310 AT3G27580.1 66.537 514 133 7 140 629 80 578 0.0 657
MsaG030310 AT2G44830.2 62.661 466 143 7 192 629 303 765 0.0 590
MsaG030310 AT2G44830.3 62.661 466 143 7 192 629 303 765 0.0 590
MsaG030310 AT2G44830.1 62.661 466 143 7 192 629 303 765 0.0 590
MsaG030310 AT5G40030.1 62.559 422 133 7 225 629 86 499 0.0 543
MsaG030310 AT1G79250.1 66.142 381 122 3 225 600 119 497 0.0 524
MsaG030310 AT1G79250.3 66.142 381 122 3 225 600 119 497 0.0 524
MsaG030310 AT1G79250.2 66.142 381 122 3 225 600 119 497 0.0 524
MsaG030310 AT1G79250.4 66.142 381 122 3 225 600 119 497 0.0 524
MsaG030310 AT3G52890.2 57.642 458 172 6 192 629 479 934 1.24e-179 534
MsaG030310 AT3G52890.4 57.642 458 172 6 192 629 479 934 1.24e-179 534
MsaG030310 AT3G52890.1 57.642 458 172 6 192 629 479 934 1.24e-179 534
MsaG030310 AT3G52890.3 57.642 458 172 6 192 629 479 934 1.24e-179 534
MsaG030310 AT3G12690.1 62.595 393 140 2 208 600 141 526 5.17e-177 515
MsaG030310 AT3G12690.3 62.595 393 140 2 208 600 141 526 5.17e-177 515
MsaG030310 AT3G12690.2 62.595 393 140 2 208 600 141 526 5.17e-177 515
MsaG030310 AT5G03640.2 56.304 460 182 6 183 629 473 926 7.84e-177 526
MsaG030310 AT5G03640.1 56.304 460 182 6 183 629 473 926 7.84e-177 526
MsaG030310 AT1G16440.1 60.094 426 137 7 225 629 86 499 3.26e-176 510
MsaG030310 AT2G36350.1 57.395 453 175 6 192 629 500 949 3.96e-172 515
MsaG030310 AT2G26700.1 45.773 485 200 9 194 623 23 499 6.09e-134 403
MsaG030310 AT3G44610.1 54.795 365 130 8 252 593 71 423 3.87e-128 385
MsaG030310 AT2G34650.1 48.668 413 180 10 225 629 50 438 3.18e-125 377
MsaG030310 AT5G58140.6 44.499 409 178 5 226 629 551 915 1.27e-109 351
MsaG030310 AT5G58140.7 44.499 409 178 5 226 629 551 915 1.27e-109 351
MsaG030310 AT5G58140.5 44.499 409 178 5 226 629 551 915 1.27e-109 351
MsaG030310 AT5G58140.2 44.499 409 178 5 226 629 551 915 1.27e-109 351
MsaG030310 AT5G58140.1 44.499 409 178 5 226 629 551 915 1.27e-109 351
MsaG030310 AT5G58140.3 47.139 367 150 3 226 592 551 873 2.95e-107 344
MsaG030310 AT3G14370.1 43.590 390 181 6 227 607 61 420 8.53e-106 328
MsaG030310 AT3G45780.2 45.867 375 161 3 225 599 636 968 7.64e-99 324
MsaG030310 AT3G45780.1 45.867 375 161 3 225 599 636 968 7.64e-99 324
MsaG030310 AT1G53700.1 40.640 406 199 6 227 622 66 439 7.60e-98 308
MsaG030310 AT3G20830.1 39.071 366 191 9 246 600 15 359 1.01e-70 234
MsaG030310 AT1G51170.1 37.978 366 191 10 247 600 17 358 1.49e-70 234
MsaG030310 AT4G13000.1 34.986 363 190 9 247 600 15 340 5.06e-66 221
MsaG030310 AT3G25250.1 33.871 372 192 8 247 600 12 347 5.50e-66 223
MsaG030310 AT1G45160.2 35.393 356 179 8 247 598 665 973 8.17e-53 196
MsaG030310 AT5G62310.1 33.884 363 182 10 252 610 754 1062 1.15e-52 196
MsaG030310 AT1G45160.1 35.393 356 179 8 247 598 665 973 1.17e-52 196
MsaG030310 AT1G48490.4 33.528 343 178 7 247 588 824 1117 2.03e-51 192
MsaG030310 AT1G48490.3 33.528 343 178 7 247 588 823 1116 2.23e-51 192
MsaG030310 AT1G48490.2 33.528 343 178 7 247 588 823 1116 2.23e-51 192
MsaG030310 AT1G48490.1 33.528 343 178 7 247 588 823 1116 2.23e-51 192
MsaG030310 AT3G17850.1 34.018 341 181 8 249 588 879 1176 8.58e-51 190
MsaG030310 AT5G09890.2 31.161 353 206 8 240 588 90 409 4.16e-49 179
MsaG030310 AT5G09890.1 31.161 353 206 8 240 588 90 409 4.21e-49 179
MsaG030310 AT1G30640.3 30.081 369 222 10 237 601 12 348 6.75e-49 177
MsaG030310 AT1G30640.2 30.081 369 222 10 237 601 105 441 1.00e-48 179
MsaG030310 AT1G30640.1 30.081 369 222 10 237 601 105 441 1.00e-48 179
MsaG030310 AT4G33080.2 30.688 378 224 10 231 599 73 421 3.58e-48 176
MsaG030310 AT4G33080.1 30.688 378 224 10 231 599 73 421 4.62e-48 176
MsaG030310 AT2G20470.3 30.790 367 208 9 240 600 112 438 4.27e-45 168
MsaG030310 AT4G14350.2 28.434 415 239 11 195 601 72 436 5.30e-45 169
MsaG030310 AT4G14350.1 28.434 415 239 11 195 601 72 436 5.30e-45 169
MsaG030310 AT4G14350.4 28.434 415 239 11 195 601 72 436 5.30e-45 169
MsaG030310 AT4G14350.3 28.434 415 239 11 195 601 72 436 6.54e-45 168
MsaG030310 AT2G20470.2 30.790 367 208 9 240 600 112 438 6.91e-45 169
MsaG030310 AT2G20470.1 30.790 367 208 9 240 600 112 438 6.91e-45 169
MsaG030310 AT3G23310.1 30.411 365 210 8 231 588 99 426 3.66e-44 166
MsaG030310 AT1G03920.1 30.024 413 233 11 195 599 90 454 1.09e-43 165
MsaG030310 AT1G03920.3 30.024 413 233 11 195 599 90 454 1.09e-43 165
MsaG030310 AT1G03920.2 32.022 356 196 9 252 599 24 341 2.87e-43 162
MsaG030310 AT2G19400.1 29.235 366 221 9 231 588 84 419 1.11e-41 159
MsaG030310 AT5G58140.4 48.855 131 67 0 226 356 551 681 2.01e-33 136
MsaG030310 AT5G04510.2 28.940 349 182 12 252 599 44 327 1.31e-31 127
MsaG030310 AT5G04510.1 28.940 349 182 12 252 599 44 327 3.93e-31 127
MsaG030310 AT3G10540.1 28.080 349 185 12 252 599 45 328 7.12e-29 120
MsaG030310 AT3G08730.1 30.224 268 147 6 132 399 52 279 4.11e-28 118
MsaG030310 AT3G08730.1 45.133 113 58 3 477 588 285 394 5.02e-24 106
MsaG030310 AT3G08730.2 30.224 268 147 6 132 399 52 279 4.11e-28 118
MsaG030310 AT3G08730.2 45.133 113 58 3 477 588 285 394 5.02e-24 106
MsaG030310 AT3G08720.1 38.710 155 93 1 245 399 133 285 1.10e-27 117
MsaG030310 AT3G08720.1 45.133 113 58 3 477 588 291 400 8.96e-24 105
MsaG030310 AT3G08720.3 38.710 155 93 1 245 399 133 285 1.10e-27 117
MsaG030310 AT3G08720.3 45.133 113 58 3 477 588 291 400 8.96e-24 105
MsaG030310 AT3G08720.4 38.710 155 93 1 245 399 133 285 1.10e-27 117
MsaG030310 AT3G08720.4 45.133 113 58 3 477 588 291 400 8.96e-24 105
MsaG030310 AT3G08720.2 38.710 155 93 1 245 399 133 285 1.10e-27 117
MsaG030310 AT3G08720.2 45.133 113 58 3 477 588 291 400 8.96e-24 105
MsaG030310 AT5G04510.3 35.465 172 108 3 252 423 44 212 9.20e-25 105
MsaG030310 AT2G25090.1 26.190 336 174 10 252 584 15 279 1.42e-22 101
MsaG030310 AT5G18700.1 37.748 151 86 3 249 399 1 143 1.33e-20 97.4
MsaG030310 AT5G57630.2 26.241 282 128 6 245 523 5 209 3.24e-20 94.0
MsaG030310 AT5G57630.1 26.241 282 128 6 245 523 5 209 3.56e-20 94.0
MsaG030310 AT5G25110.1 25.706 354 180 11 235 587 31 302 1.44e-19 92.8
MsaG030310 AT2G25880.4 32.804 189 120 2 235 418 21 207 2.58e-19 89.4
MsaG030310 AT2G25880.4 37.963 108 63 1 476 583 186 289 6.04e-16 79.3
MsaG030310 AT2G45490.2 28.571 231 154 6 244 467 14 240 2.67e-19 88.6
MsaG030310 AT2G45490.2 38.824 85 52 0 476 560 170 254 6.03e-13 69.7
MsaG030310 AT2G25880.1 32.804 189 120 2 235 418 8 194 2.73e-19 89.4
MsaG030310 AT2G25880.1 37.963 108 63 1 476 583 173 276 5.35e-16 79.3
MsaG030310 AT4G32830.1 33.714 175 109 2 249 418 28 200 2.82e-19 89.4
MsaG030310 AT4G32830.1 33.333 126 73 2 476 601 179 293 2.34e-15 77.8
MsaG030310 AT2G45490.1 27.170 265 172 8 244 491 14 274 3.08e-19 89.0
MsaG030310 AT2G45490.1 37.097 124 67 2 476 599 170 282 1.16e-18 87.4
MsaG030310 AT2G25880.3 32.804 189 120 2 235 418 69 255 5.01e-19 89.4
MsaG030310 AT2G25880.3 37.963 108 63 1 476 583 234 337 1.79e-15 79.0
MsaG030310 AT3G01090.3 24.850 334 172 9 251 584 18 272 5.25e-19 91.3
MsaG030310 AT3G01090.1 24.850 334 172 9 251 584 18 272 5.25e-19 91.3
MsaG030310 AT3G01090.2 24.850 334 172 9 251 584 41 295 6.82e-19 90.9
MsaG030310 AT3G61960.1 24.620 329 167 11 249 571 7 260 3.73e-18 89.0
MsaG030310 AT3G61960.2 24.620 329 167 11 249 571 7 260 4.03e-18 88.6
MsaG030310 AT1G12680.1 34.194 155 90 5 256 408 111 255 4.77e-18 87.8
MsaG030310 AT5G10930.1 25.776 322 163 9 250 569 10 257 9.33e-18 86.7
MsaG030310 AT2G30360.1 26.254 339 167 10 249 583 18 277 1.00e-17 86.7
MsaG030310 AT2G20050.2 37.931 116 66 3 479 591 931 1043 2.72e-17 86.7
MsaG030310 AT2G20050.1 37.931 116 66 3 479 591 934 1046 2.73e-17 86.7
MsaG030310 AT3G29160.3 24.251 334 174 9 251 584 19 273 3.06e-17 84.3
MsaG030310 AT4G18700.1 32.026 153 101 1 247 399 21 170 4.59e-17 85.1
MsaG030310 AT3G17510.1 33.333 159 103 3 241 399 10 165 6.71e-17 84.0
MsaG030310 AT3G29160.1 24.251 334 174 9 251 584 19 273 8.41e-17 84.3
MsaG030310 AT3G29160.2 24.251 334 174 9 251 584 19 273 8.41e-17 84.3
MsaG030310 AT5G45810.1 30.719 153 103 1 247 399 23 172 1.33e-16 83.6
MsaG030310 AT4G24400.1 29.070 172 116 3 248 415 5 174 1.59e-16 82.8
MsaG030310 AT4G24400.2 29.070 172 116 3 248 415 5 174 1.93e-16 82.4
MsaG030310 AT2G34180.1 26.224 286 134 9 241 523 46 257 1.96e-16 83.2
MsaG030310 AT2G38490.1 37.255 153 87 4 250 399 26 172 3.17e-16 82.0
MsaG030310 AT5G45820.1 30.573 157 106 2 243 399 3 156 3.32e-16 82.0
MsaG030310 AT2G25880.2 37.963 108 63 1 476 583 141 244 3.90e-16 79.3
MsaG030310 AT5G28290.3 29.870 154 102 3 249 399 1 151 1.11e-15 80.9
MsaG030310 AT4G14580.1 24.695 328 170 11 245 569 14 267 1.20e-15 80.1
MsaG030310 AT5G28290.1 29.870 154 102 3 249 399 1 151 1.22e-15 80.9
MsaG030310 AT5G28290.2 29.870 154 102 3 249 399 1 151 1.22e-15 80.9
MsaG030310 AT1G29230.1 30.719 153 99 2 249 399 71 218 1.51e-15 80.5
MsaG030310 AT3G04810.2 25.980 204 129 5 249 433 1 201 1.57e-15 80.5
MsaG030310 AT3G04810.1 25.980 204 129 5 249 433 1 201 1.57e-15 80.5
MsaG030310 AT3G04810.3 25.980 204 129 5 249 433 1 201 1.57e-15 80.5
MsaG030310 AT3G44200.2 27.922 154 105 3 249 399 5 155 1.82e-15 80.9
MsaG030310 AT3G44200.1 27.922 154 105 3 249 399 5 155 1.82e-15 80.9
MsaG030310 AT3G20860.1 24.405 168 123 2 249 413 1 167 2.75e-15 79.0
MsaG030310 AT5G21326.1 32.680 153 97 4 249 399 10 158 4.74e-15 78.2
MsaG030310 AT1G54510.4 27.922 154 105 3 249 399 1 151 6.36e-15 78.6
MsaG030310 AT1G54510.2 27.922 154 105 3 249 399 1 151 6.36e-15 78.6
MsaG030310 AT1G54510.1 27.922 154 105 3 249 399 1 151 6.36e-15 78.6
MsaG030310 AT1G54510.3 27.922 154 105 3 249 399 1 151 6.36e-15 78.6
MsaG030310 AT3G63280.4 28.025 157 107 3 246 399 52 205 6.61e-15 78.6
MsaG030310 AT5G58380.1 21.557 334 183 8 252 584 12 267 7.56e-15 77.8
MsaG030310 AT3G63280.2 28.571 154 104 3 249 399 1 151 7.64e-15 78.2
MsaG030310 AT3G63280.3 28.571 154 104 3 249 399 1 151 7.64e-15 78.2
MsaG030310 AT3G63280.1 28.571 154 104 3 249 399 1 151 7.64e-15 78.2
MsaG030310 AT2G26980.2 31.098 164 102 5 238 399 5 159 1.21e-14 75.1
MsaG030310 AT5G01810.3 33.333 159 99 4 243 399 3 156 1.24e-14 76.6
MsaG030310 AT5G35410.2 29.221 154 107 2 246 399 5 156 1.25e-14 76.6
MsaG030310 AT5G01810.1 33.333 159 99 4 243 399 3 156 1.32e-14 76.6
MsaG030310 AT5G01810.2 33.333 159 99 4 243 399 3 156 1.32e-14 76.6
MsaG030310 AT3G06030.1 29.126 206 123 6 233 432 59 247 1.40e-14 77.8
MsaG030310 AT2G26980.1 31.098 164 102 5 238 399 5 159 1.56e-14 76.3
MsaG030310 AT1G54960.1 32.530 166 93 6 240 399 66 218 1.63e-14 77.4
MsaG030310 AT1G54960.2 32.530 166 93 6 240 399 66 218 1.63e-14 77.4
MsaG030310 AT2G26980.3 31.098 164 102 5 238 399 5 159 1.75e-14 76.6
MsaG030310 AT1G35670.1 31.818 154 99 4 251 400 25 176 1.86e-14 76.6
MsaG030310 AT5G01820.1 35.849 159 94 5 243 399 14 166 1.88e-14 76.6
MsaG030310 AT2G26980.4 31.098 164 102 5 238 399 15 169 2.04e-14 76.3
MsaG030310 AT2G26980.5 31.098 164 102 5 238 399 5 159 2.87e-14 75.9
MsaG030310 AT5G35410.1 29.221 154 107 2 246 399 5 156 3.08e-14 75.9
MsaG030310 AT5G39440.1 33.557 149 97 2 251 399 18 164 4.40e-14 75.5
MsaG030310 AT5G39440.1 37.624 101 57 3 485 585 178 272 9.07e-11 65.1
MsaG030310 AT1G01140.2 29.341 167 111 3 233 399 5 164 5.81e-14 75.1
MsaG030310 AT1G01140.3 29.341 167 111 3 233 399 5 164 5.86e-14 75.1
MsaG030310 AT1G69220.1 30.323 155 99 3 252 403 249 397 6.47e-14 75.9
MsaG030310 AT1G01140.1 29.341 167 111 3 233 399 5 164 6.82e-14 74.7
MsaG030310 AT1G09000.2 28.774 212 130 8 252 450 69 272 7.43e-14 75.1
MsaG030310 AT1G09000.1 28.774 212 130 8 252 450 69 272 8.33e-14 75.1
MsaG030310 AT1G53570.6 29.412 187 119 5 256 439 218 394 9.14e-14 74.7
MsaG030310 AT1G53570.7 29.412 187 119 5 256 439 218 394 9.25e-14 74.7
MsaG030310 AT1G30270.1 29.412 153 102 3 249 399 28 176 9.68e-14 74.3
MsaG030310 AT1G53570.4 29.412 187 119 5 256 439 218 394 1.05e-13 74.7
MsaG030310 AT1G53570.1 29.412 187 119 5 256 439 218 394 1.05e-13 74.7
MsaG030310 AT1G53570.2 29.412 187 119 5 256 439 218 394 1.09e-13 74.7
MsaG030310 AT1G53570.3 29.412 187 119 5 256 439 218 394 1.09e-13 74.7
MsaG030310 AT1G30270.2 29.412 153 102 3 249 399 28 176 1.18e-13 74.3
MsaG030310 AT3G23000.1 31.013 158 94 4 249 399 22 171 1.37e-13 73.6
MsaG030310 AT1G48260.1 32.026 153 102 2 247 399 6 156 2.02e-13 73.2
MsaG030310 AT4G09570.1 31.818 154 99 4 251 400 24 175 2.30e-13 73.2
MsaG030310 AT4G26070.4 30.516 213 124 8 214 411 20 223 3.15e-13 72.0
MsaG030310 AT3G10660.2 32.680 153 97 4 252 400 186 336 3.43e-13 73.2
MsaG030310 AT3G10660.1 32.680 153 97 4 252 400 186 336 3.43e-13 73.2
MsaG030310 AT4G26070.1 30.460 174 114 5 240 411 56 224 3.79e-13 71.2
MsaG030310 AT5G45430.2 29.947 187 113 7 249 432 1 172 4.31e-13 72.4
MsaG030310 AT4G26070.5 30.460 174 114 5 240 411 43 211 4.43e-13 71.2
MsaG030310 AT2G17890.1 29.834 181 114 5 252 427 108 280 4.45e-13 72.8
MsaG030310 AT5G45430.1 29.947 187 113 7 249 432 1 172 4.86e-13 72.4
MsaG030310 AT4G26070.2 30.460 174 114 5 240 411 56 224 5.37e-13 71.2
MsaG030310 AT4G26070.3 30.460 174 114 5 240 411 56 224 5.37e-13 71.2
MsaG030310 AT1G50700.3 33.333 153 96 4 252 400 73 223 6.04e-13 72.0
MsaG030310 AT4G19110.2 28.649 185 118 5 249 432 1 172 6.56e-13 71.6
MsaG030310 AT4G19110.1 28.649 185 118 5 249 432 1 172 7.54e-13 71.6
MsaG030310 AT1G50700.1 33.333 153 96 4 252 400 73 223 8.91e-13 71.6
MsaG030310 AT1G50700.2 33.333 153 96 4 252 400 73 223 1.18e-12 71.2
MsaG030310 AT4G04720.2 30.719 153 100 4 252 400 80 230 1.54e-12 70.9
MsaG030310 AT4G04720.1 30.719 153 100 4 252 400 80 230 1.54e-12 70.9
MsaG030310 AT1G32320.1 31.034 145 92 2 255 399 51 187 1.60e-12 69.3
MsaG030310 AT3G20410.2 32.026 153 98 4 252 400 91 241 1.77e-12 70.9
MsaG030310 AT3G20410.1 32.026 153 98 4 252 400 91 241 1.77e-12 70.9
MsaG030310 AT1G53165.2 28.105 153 106 2 251 403 14 162 1.84e-12 70.9
MsaG030310 AT1G53165.1 28.105 153 106 2 251 403 14 162 1.88e-12 70.9
MsaG030310 AT1G53165.3 28.105 153 106 2 251 403 14 162 1.90e-12 70.9
MsaG030310 AT1G50240.3 33.333 102 62 2 482 583 161 256 2.38e-12 70.9
MsaG030310 AT1G50240.3 29.375 160 109 3 252 411 6 161 1.51e-11 68.2
MsaG030310 AT1G50240.2 33.333 102 62 2 482 583 161 256 2.38e-12 70.9
MsaG030310 AT1G50240.2 29.375 160 109 3 252 411 6 161 1.51e-11 68.2
MsaG030310 AT4G35310.2 27.869 183 123 5 252 432 97 272 3.60e-12 69.7
MsaG030310 AT4G35310.1 27.869 183 123 5 252 432 97 272 3.60e-12 69.7
MsaG030310 AT4G30960.1 29.677 155 105 3 245 399 18 168 3.92e-12 69.3
MsaG030310 AT2G41860.1 32.026 153 98 4 252 400 54 204 4.19e-12 69.3
MsaG030310 AT2G41860.2 32.026 153 98 4 252 400 54 204 4.34e-12 69.3
MsaG030310 AT1G12580.1 27.434 226 146 7 207 427 2 214 4.74e-12 69.3
MsaG030310 AT1G69220.2 30.137 146 93 3 261 403 231 370 5.83e-12 69.3
MsaG030310 AT2G38910.1 29.609 179 115 6 252 427 134 304 8.15e-12 68.6
MsaG030310 AT5G04870.1 30.000 180 113 5 252 427 150 320 1.16e-11 68.2
MsaG030310 AT3G21220.2 29.452 146 93 3 255 399 73 209 1.31e-11 67.0
MsaG030310 AT3G21220.1 29.452 146 93 3 255 399 73 209 1.31e-11 67.0
MsaG030310 AT2G35890.2 26.695 236 151 8 203 427 78 302 1.47e-11 67.8
MsaG030310 AT2G35890.1 26.695 236 151 8 203 427 78 302 1.47e-11 67.8
MsaG030310 AT2G41140.1 29.032 186 113 6 251 427 122 297 1.48e-11 67.8
MsaG030310 AT5G24430.1 25.946 185 122 5 250 427 141 317 1.53e-11 67.8
MsaG030310 AT3G56760.1 31.288 163 102 5 251 406 123 282 1.68e-11 67.8
MsaG030310 AT1G73500.1 29.730 148 93 4 255 399 50 189 1.96e-11 65.9
MsaG030310 AT3G57530.2 33.557 149 93 4 256 400 67 213 2.08e-11 67.0
MsaG030310 AT2G31500.1 34.228 149 92 4 256 400 70 216 2.15e-11 67.4
MsaG030310 AT4G10010.2 33.775 151 93 5 252 399 156 302 2.30e-11 67.4
MsaG030310 AT3G57530.1 33.557 149 93 4 256 400 67 213 2.70e-11 67.0
MsaG030310 AT5G19360.1 31.373 153 99 4 252 400 68 218 3.35e-11 66.6
MsaG030310 AT1G78290.3 32.258 155 93 5 249 399 1 147 3.36e-11 65.5
MsaG030310 AT1G78290.2 32.258 155 93 5 249 399 1 147 3.36e-11 65.5
MsaG030310 AT4G36070.1 29.870 154 102 4 251 399 70 222 3.36e-11 66.6
MsaG030310 AT2G17290.1 29.936 157 106 4 252 406 85 239 3.54e-11 66.6
MsaG030310 AT2G17290.2 29.936 157 106 4 252 406 85 239 3.54e-11 66.6
MsaG030310 AT4G36070.2 29.870 154 102 4 251 399 70 222 3.77e-11 66.6
MsaG030310 AT5G57565.2 32.520 123 72 3 311 429 14 129 3.81e-11 61.6
MsaG030310 AT5G57565.6 32.520 123 72 3 311 429 14 129 3.81e-11 61.6
MsaG030310 AT5G66210.3 27.072 181 121 3 251 427 61 234 3.83e-11 66.2
MsaG030310 AT3G05050.3 30.405 148 102 1 252 399 138 284 3.84e-11 66.6
MsaG030310 AT3G05050.2 30.405 148 102 1 252 399 138 284 3.84e-11 66.6
MsaG030310 AT3G05050.1 30.405 148 102 1 252 399 138 284 3.84e-11 66.6
MsaG030310 AT1G63700.1 25.749 167 120 2 240 404 388 552 4.14e-11 66.6
MsaG030310 AT1G63700.2 25.749 167 120 2 240 404 388 552 4.14e-11 66.6
MsaG030310 AT5G12180.1 31.373 153 99 4 252 400 73 223 4.43e-11 66.2
MsaG030310 AT5G66210.5 27.072 181 121 3 251 427 61 234 5.11e-11 65.9
MsaG030310 AT5G12480.1 29.870 154 102 4 251 400 58 209 5.52e-11 65.9
MsaG030310 AT5G66210.6 29.412 153 104 2 251 399 61 213 5.85e-11 65.5
MsaG030310 AT5G66210.4 29.412 153 104 2 251 399 61 213 5.85e-11 65.5
MsaG030310 AT3G15220.1 26.797 153 108 2 251 403 14 162 6.08e-11 65.9
MsaG030310 AT5G66210.1 27.072 181 121 3 251 427 61 234 6.11e-11 65.9
MsaG030310 AT5G66210.2 27.072 181 121 3 251 427 61 234 6.11e-11 65.9
MsaG030310 AT5G19450.2 30.719 153 100 4 252 400 57 207 7.59e-11 65.5
MsaG030310 AT5G19450.1 30.719 153 100 4 252 400 57 207 7.59e-11 65.5
MsaG030310 AT1G53050.2 30.409 171 110 6 234 399 114 280 7.97e-11 65.9
MsaG030310 AT1G53050.1 30.409 171 110 6 234 399 114 280 7.97e-11 65.9
MsaG030310 AT4G29810.1 29.121 182 116 5 235 411 53 226 8.21e-11 64.7
MsaG030310 AT3G49370.1 28.834 163 103 5 244 399 139 295 8.39e-11 65.5
MsaG030310 AT5G23580.1 31.333 150 97 4 258 403 28 175 8.91e-11 65.1
MsaG030310 AT1G73690.1 33.775 151 91 5 253 399 10 155 9.06e-11 64.7
MsaG030310 AT1G66750.1 34.211 152 89 6 253 399 12 157 9.32e-11 64.3
MsaG030310 AT4G29810.3 29.121 182 116 5 235 411 62 235 9.91e-11 64.3
MsaG030310 AT4G29810.2 29.121 182 116 5 235 411 62 235 9.94e-11 64.3

Find 131 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 6:-6278298 MsaT030310.1:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 6:+6280559 None:intergenic
CCTTCACCTTTGATAATTTC+AGG 0.209471 6:+6278425 None:intergenic
GGAGATTCTGGAAACCTTAA+AGG 0.266914 6:+6278284 None:intergenic
CGAACACCATTCAAAGGTTC+TGG 0.282954 6:-6278341 MsaT030310.1:CDS
AGACATTATCATCATAATTA+TGG 0.289252 6:-6280503 MsaT030310.1:CDS
GAATGGATGTTGTTTGATTT+CGG 0.318757 6:+6278175 None:intergenic
AAGCTGACAGTAGGAGATTC+TGG 0.319263 6:+6278272 None:intergenic
CTTATATCATTTGCCTTATG+AGG 0.331403 6:+6280002 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 6:+6278208 None:intergenic
TGCAGAAGTTCTGCTTGCTT+TGG 0.345070 6:-6278825 MsaT030310.1:CDS
TCGCGAGGGGATGTTGGAAA+TGG 0.346924 6:-6279952 MsaT030310.1:CDS
CCTTGATTATTTCTATATAA+GGG 0.352324 6:+6280560 None:intergenic
CTATTCAGCCACCGTCTATT+CGG 0.354971 6:-6280219 MsaT030310.1:CDS
TCTGGCTGCATTGCACATGC+TGG 0.356299 6:+6278620 None:intergenic
CGCGAGGGGATGTTGGAAAT+GGG 0.363431 6:-6279951 MsaT030310.1:CDS
TTCTTATACGAACTCTTGTT+TGG 0.364317 6:-6278365 MsaT030310.1:CDS
CATTCTTTCACAATGTGAAC+TGG 0.366931 6:-6278157 MsaT030310.1:CDS
CGGGGAATCCCTGATGTTAT+AGG 0.370257 6:+6280596 None:intergenic
AGATTGGGAAGTGGAGATAT+AGG 0.370938 6:-6279909 MsaT030310.1:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 6:+6280577 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 6:+6280465 None:intergenic
ACCACGATGTTTAATGTTGT+TGG 0.384486 6:-6278311 MsaT030310.1:CDS
AGTGAGTGTGTGAGTGTTGA+TGG 0.390003 6:-6280164 MsaT030310.1:CDS
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 6:+6278494 None:intergenic
CAGAACCTTTGAATGGTGTT+CGG 0.404895 6:+6278342 None:intergenic
CTGTGGATTGGTGGACGTTC+GGG 0.406089 6:-6278391 MsaT030310.1:CDS
TTAGTTTCAGTGATCGGGTT+TGG 0.409046 6:+6278665 None:intergenic
GCTGTGGATTGGTGGACGTT+CGG 0.420545 6:-6278392 MsaT030310.1:CDS
GAAGTTGGAACGAACCCTTC+TGG 0.422479 6:-6278059 MsaT030310.1:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 6:+6278193 None:intergenic
TCATTAAAATCACTGAAATT+CGG 0.427397 6:+6280116 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 6:-6278261 MsaT030310.1:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 6:+6278207 None:intergenic
CAACTCGTAAGAAGCTACTA+AGG 0.438073 6:-6279812 MsaT030310.1:CDS
TTGGAGTACTTGCACATGCT+TGG 0.440491 6:-6278806 MsaT030310.1:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 6:+6278476 None:intergenic
TTCATCATCATGGTCTGTCT+TGG 0.441424 6:+6278101 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 6:-6279924 MsaT030310.1:CDS
GACACTCTCTTGCTTGGTAA+TGG 0.442984 6:-6279712 MsaT030310.1:CDS
CCACGATGTTTAATGTTGTT+GGG 0.443702 6:-6278310 MsaT030310.1:CDS
GTGGCGACCTTCATGCAATC+AGG 0.443810 6:-6279677 MsaT030310.1:CDS
GGTACTCGCTCTACAGATAC+TGG 0.445373 6:+6280082 None:intergenic
TGAGTTTGGTTTCATCATCA+TGG 0.445934 6:+6278091 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 6:+6280278 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 6:+6280061 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 6:-6278450 MsaT030310.1:CDS
CGATTCCCAGAACCTTTGAA+TGG 0.449595 6:+6278335 None:intergenic
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 6:+6278510 None:intergenic
CACAGCCTTCCTATAACATC+AGG 0.452461 6:-6280605 MsaT030310.1:CDS
AAGAAACAATGAAAGGTTGC+CGG 0.455081 6:-6280420 MsaT030310.1:CDS
AACTCAACTGAAAATGAAGT+TGG 0.456517 6:-6278074 MsaT030310.1:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 6:+6280668 None:intergenic
TGCTGGCTGAATGCAGTATC+CGG 0.457718 6:+6278637 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 6:-6280015 MsaT030310.1:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 6:-6279663 MsaT030310.1:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 6:-6278467 MsaT030310.1:CDS
TTTGGTGACTTCACTAGAGT+TGG 0.473963 6:+6278683 None:intergenic
ATGGTCTGTCTTGGTACCTC+TGG 0.474291 6:+6278110 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 6:-6279998 MsaT030310.1:CDS
TTAACAACGGCTCGTTTCGA+TGG 0.483495 6:+6280305 None:intergenic
GTATATCTAGCTGAACTTAG+TGG 0.485543 6:-6279882 MsaT030310.1:CDS
GACTGAGACACTCTCTTGCT+TGG 0.489683 6:-6279718 MsaT030310.1:CDS
GATTGCATGAAGGTCGCCAC+CGG 0.501221 6:+6279680 None:intergenic
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 6:-6278262 MsaT030310.1:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 6:-6278656 MsaT030310.1:CDS
CCGAGCTCGCGAGGGGATGT+TGG 0.511381 6:-6279958 MsaT030310.1:CDS
CAGGGATTCCCCGTTCTTCG+CGG 0.512241 6:-6280586 MsaT030310.1:CDS
TCAAAGTGTGTATATAATGT+AGG 0.514064 6:+6279741 None:intergenic
CATGCATGTTGGATGCAGTC+TGG 0.515667 6:+6278602 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 6:+6279670 None:intergenic
CAGTTCACATTGTGAAAGAA+TGG 0.524170 6:+6278158 None:intergenic
CCAACATCCCCTCGCGAGCT+CGG 0.527137 6:+6279958 None:intergenic
TAGTAACTGTTCTGAGGACT+AGG 0.528414 6:+6280239 None:intergenic
TCAAGCTGTCCGAGCTCGCG+AGG 0.536729 6:-6279967 MsaT030310.1:CDS
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 6:+6280576 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 6:-6280639 MsaT030310.1:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 6:-6279918 MsaT030310.1:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 6:+6278045 None:intergenic
CCCTTATATAGAAATAATCA+AGG 0.559154 6:-6280560 MsaT030310.1:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 6:-6279997 MsaT030310.1:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 6:-6278400 MsaT030310.1:CDS
GAACACCATTCAAAGGTTCT+GGG 0.567648 6:-6278340 MsaT030310.1:CDS
TTTGGCCGAACACCATTCAA+AGG 0.568709 6:-6278347 MsaT030310.1:CDS
TTGTTTCGCTTCCGAATAGA+CGG 0.570744 6:+6280208 None:intergenic
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 6:+6280614 None:intergenic
ATTGCATGAAGGTCGCCACC+GGG 0.573434 6:+6279681 None:intergenic
AATTCTAAATAATTACCAGA+AGG 0.574306 6:+6278044 None:intergenic
AGTATCTGTAGAGCGAGTAC+CGG 0.579881 6:-6280080 MsaT030310.1:CDS
ATTATCAAAGGTGAAGGACA+TGG 0.585663 6:-6278419 MsaT030310.1:CDS
ATTCTTTCACAATGTGAACT+GGG 0.590369 6:-6278156 MsaT030310.1:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 6:-6278403 MsaT030310.1:CDS
GTCTGTCTTGGTACCTCTGG+CGG 0.591624 6:+6278113 None:intergenic
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 6:+6278495 None:intergenic
GCTGCAAGGGACTTGATCAG+AGG 0.595287 6:-6278248 MsaT030310.1:CDS
GCGAGGGGATGTTGGAAATG+GGG 0.597867 6:-6279950 MsaT030310.1:CDS
CCTGAAATTATCAAAGGTGA+AGG 0.598793 6:-6278425 MsaT030310.1:CDS
GAAGCTACTAAGGGCTCAGA+CGG 0.606383 6:-6279802 MsaT030310.1:CDS
TGCAGTTGAAACTATTGCAG+AGG 0.606600 6:-6280660 MsaT030310.1:CDS
ATCACGAAAGAAACAATGAA+AGG 0.611280 6:-6280427 MsaT030310.1:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.617928 6:+6280292 None:intergenic
AAGCTGTCCGAGCTCGCGAG+GGG 0.618922 6:-6279965 MsaT030310.1:CDS
CACCGTCTTGCCTATAGACG+CGG 0.620769 6:-6278203 MsaT030310.1:CDS
CAAGCTGTCCGAGCTCGCGA+GGG 0.623020 6:-6279966 MsaT030310.1:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 6:+6280563 None:intergenic
TTGGCGCCTGAAATTATCAA+AGG 0.624538 6:-6278431 MsaT030310.1:CDS
AACTCGTAAGAAGCTACTAA+GGG 0.627316 6:-6279811 MsaT030310.1:CDS
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 6:+6278263 None:intergenic
AATGTGTTGGTGAGAGAAGA+CGG 0.638684 6:-6278755 MsaT030310.1:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 6:+6278500 None:intergenic
GAATCCCTGATGTTATAGGA+AGG 0.643848 6:+6280600 None:intergenic
CTGATGTTATAGGAAGGCTG+TGG 0.652569 6:+6280606 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 6:+6280233 None:intergenic
CCTTAAGCCTGAAAATGTGT+TGG 0.653684 6:-6278768 MsaT030310.1:CDS
TTTCGCTTCCGAATAGACGG+TGG 0.656224 6:+6280211 None:intergenic
CTATAGGCAAGACGGTGTTG+GGG 0.657836 6:+6278209 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 6:+6278454 None:intergenic
AGCAACACAAGTAGTTTGAG+CGG 0.661120 6:-6280038 MsaT030310.1:CDS
CTTCACTAGAGTTGGACTGA+CGG 0.661951 6:+6278691 None:intergenic
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 6:+6280578 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 6:-6279662 MsaT030310.1:CDS
CCGCTGCGCTAATCCGCCAG+AGG 0.665665 6:-6278126 MsaT030310.1:CDS
TGAAGGACATGGAAGTGCTG+TGG 0.668077 6:-6278408 MsaT030310.1:CDS
TAGCTGAACTTAGTGGCACA+AGG 0.668425 6:-6279875 MsaT030310.1:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 6:+6278591 None:intergenic
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 6:+6278201 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 6:-6278484 MsaT030310.1:CDS
ACAGCCTTCCTATAACATCA+GGG 0.679147 6:-6280604 MsaT030310.1:CDS
CCTCTGGCGGATTAGCGCAG+CGG 0.690338 6:+6278126 None:intergenic
GATGGTAAGTCGTGTGAGAG+CGG 0.692630 6:-6280146 MsaT030310.1:CDS
CCCAACAACATTAAACATCG+TGG 0.694205 6:+6278310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 6278031 6280699 6278031 ID=MsaG030310
Chr6 mRNA 6278031 6280699 6278031 ID=MsaT030310.1;Parent=MsaG030310
Chr6 exon 6278031 6278856 6278031 ID=MsaT030310.1.exon2;Parent=MsaT030310.1
Chr6 CDS 6278031 6278856 6278031 ID=cds.MsaT030310.1;Parent=MsaT030310.1
Chr6 exon 6279636 6280699 6279636 ID=MsaT030310.1.exon1;Parent=MsaT030310.1
Chr6 CDS 6279636 6280699 6279636 ID=cds.MsaT030310.1;Parent=MsaT030310.1
Gene Sequence

>MsaT030310.1

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTGCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAACTGTTTGATGATGATTCTGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACCGTCTATTCGGAAGCGAAACAAAGTTTCACAAGTACTGAAGTCAGTGAGTGTGTGAGTGTTGATGGTAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTCAGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGCGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACACAAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGAGGGGATGTTGGAAATGGGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACTGAGCTTGCAACTCGTAAGAAGCTACTAAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGTCAGGTTTTATGTTGCAGAAGTTCTGCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAGCCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTCTCAGATTTTGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCACCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATCAAAGGTGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCATTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGCTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCATTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCGCCAGAGGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAACGAACCCTTCTGGTAATTATTTAGAATTTGATTACTTTTGA
Protein sequence

>MsaT030310.1

MESPMTAVETIAEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQLFDDDSENFDSSSEVLESDNSILVPSKRAVVNQPKNYYSQSETSFCPSPQNSYYSATVYSEAKQSFTSTEVSECVSVDGKSCESGEVPNFSDFNESRKTSICRASTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMGHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSPNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGTNPSGNYLEFDYF*