AlfalfaGEDB | MsaG030553

M. sativa ssp. caerulea / MsaG030553

KEGG: K09422 K16599
GO: -
PFAM: PF13921.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG030553	sp\|Q9LVW4\|MY118_ARATH	58.879	107	43	1	117	223	184	289	4.26e-37	139

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG030553	tr\|A0A896WCA4\|A0A896WCA4_MELAB	66.045	268	88	1	1	268	1	265	5.09e-113	336

TFs/TRs:

Gene ID	Type	Classification
MsaG030553	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000004	MsaG030553	0.833461	9.548940e-56	3.055508e-53
MsaG000033	MsaG030553	0.800494	2.347440e-48	3.209462e-46
MsaG000646	MsaG030553	0.814087	3.178151e-51	6.004257e-49
MsaG000722	MsaG030553	0.805052	2.716584e-49	4.123593e-47
MsaG001542	MsaG030553	0.821594	6.533112e-53	1.498769e-50
MsaG002328	MsaG030553	0.891409	9.021061e-74	2.862530e-70
MsaG003214	MsaG030553	0.825515	7.983706e-54	2.037016e-51
MsaG003514	MsaG030553	0.815526	1.530217e-51	2.997688e-49
MsaG004039	MsaG030553	0.813463	4.355301e-51	8.100337e-49
MsaG004958	MsaG030553	0.809824	2.671251e-50	4.542417e-48
MsaG005114	MsaG030553	0.861203	2.385500e-63	1.941637e-60
MsaG005635	MsaG030553	0.848955	8.357497e-60	4.371027e-57
MsaG005717	MsaG030553	0.825149	9.736861e-54	2.459300e-51
MsaG005764	MsaG030553	0.804651	3.291817e-49	4.950239e-47
MsaG005966	MsaG030553	0.814554	2.509189e-51	4.796163e-49
MsaG006314	MsaG030553	0.805497	2.194581e-49	3.365634e-47
MsaG008126	MsaG030553	0.808261	5.749912e-50	9.416249e-48
MsaG008890	MsaG030553	0.878679	4.850440e-69	8.235732e-66
MsaG010416	MsaG030553	0.822306	4.478209e-53	1.047098e-50
MsaG011013	MsaG030553	0.801967	1.176563e-48	1.663178e-46
MsaG011526	MsaG030553	0.803072	6.980727e-49	1.012110e-46
MsaG011699	MsaG030553	0.827193	3.193962e-54	8.538701e-52
MsaG041905	MsaG030553	0.826173	5.581792e-54	1.450448e-51
MsaG042146	MsaG030553	0.817868	4.595157e-52	9.558494e-50
MsaG044663	MsaG030553	0.835351	3.218033e-56	1.089303e-53
MsaG044664	MsaG030553	0.812984	5.542196e-51	1.018493e-48
MsaG044888	MsaG030553	0.826943	3.663954e-54	9.727072e-52
MsaG044914	MsaG030553	0.824522	1.366088e-53	3.391897e-51
MsaG044928	MsaG030553	0.845351	8.043371e-59	3.728558e-56
MsaG046216	MsaG030553	0.853578	4.190700e-61	2.573264e-58
MsaG047053	MsaG030553	0.801731	1.314969e-48	1.848879e-46
MsaG047153	MsaG030553	0.836841	1.352706e-56	4.788622e-54
MsaG001694	MsaG030553	0.807824	7.115730e-50	1.153114e-47
MsaG010137	MsaG030553	0.842665	4.190894e-58	1.780352e-55
MsaG013590	MsaG030553	0.824879	1.126901e-53	2.825327e-51
MsaG013526	MsaG030553	0.810501	1.911923e-50	3.305122e-48
MsaG026309	MsaG030553	0.851146	2.049365e-60	1.155463e-57
MsaG029069	MsaG030553	0.816704	8.373622e-52	1.690373e-49
MsaG031488	MsaG030553	0.823872	1.938643e-53	4.728956e-51
MsaG030863	MsaG030553	0.828780	1.331335e-54	3.721063e-52
MsaG031311	MsaG030553	0.830786	4.347570e-55	1.286805e-52
MsaG030553	MsaG033360	0.816846	7.784997e-52	1.577276e-49
MsaG030553	MsaG033581	0.850646	2.829154e-60	1.567899e-57
MsaG030553	MsaG038782	0.850333	3.460535e-60	1.896904e-57
MsaG030553	MsaG036926	0.822347	4.381868e-53	1.025696e-50
MsaG030553	MsaG035322	0.802121	1.094585e-48	1.552672e-46
MsaG030553	MsaG036795	0.814811	2.202610e-51	4.237612e-49
MsaG030553	MsaG045434	0.812428	7.323437e-51	1.327355e-48
MsaG030553	MsaG046991	0.968504	3.630099e-128	3.451806e-122
MsaG013085	MsaG030553	0.832495	1.655621e-55	5.149877e-53
MsaG014521	MsaG030553	0.833789	7.913277e-56	2.556586e-53
MsaG015707	MsaG030553	0.848959	8.337135e-60	4.360905e-57
MsaG017702	MsaG030553	0.809327	3.411524e-50	5.731642e-48
MsaG018498	MsaG030553	0.831712	2.580124e-55	7.845543e-53
MsaG019179	MsaG030553	0.818429	3.435956e-52	7.251268e-50
MsaG019442	MsaG030553	0.825497	8.062161e-54	2.055957e-51
MsaG019861	MsaG030553	0.819819	1.664402e-52	3.642878e-50
MsaG019924	MsaG030553	0.804615	3.348608e-49	5.031464e-47
MsaG020020	MsaG030553	0.817934	4.439850e-52	9.251302e-50
MsaG023924	MsaG030553	0.833575	8.943730e-56	2.871507e-53
MsaG025423	MsaG030553	0.810682	1.747614e-50	3.034417e-48
MsaG026842	MsaG030553	0.842427	4.842417e-58	2.041550e-55
MsaG027511	MsaG030553	0.840120	1.945543e-57	7.623472e-55
MsaG027872	MsaG030553	0.814295	2.861562e-51	5.434424e-49
MsaG027879	MsaG030553	0.834419	5.512217e-56	1.814648e-53
MsaG027881	MsaG030553	0.824341	1.506440e-53	3.722035e-51
MsaG028234	MsaG030553	0.802138	1.085662e-48	1.540631e-46
MsaG029086	MsaG030553	0.821482	6.933715e-53	1.585950e-50
MsaG029671	MsaG030553	0.805171	2.566143e-49	3.906017e-47
MsaG031043	MsaG030553	0.824884	1.123792e-53	2.817923e-51
MsaG031408	MsaG030553	0.808774	4.474620e-50	7.418877e-48
MsaG032947	MsaG030553	0.820236	1.336844e-52	2.958852e-50
MsaG034319	MsaG030553	0.840057	2.019731e-57	7.898819e-55
MsaG035045	MsaG030553	0.829498	8.933725e-55	2.548590e-52
MsaG035532	MsaG030553	0.865553	1.087195e-64	1.050026e-61
MsaG035533	MsaG030553	0.824515	1.371748e-53	3.405187e-51
MsaG035552	MsaG030553	0.863654	4.243764e-64	3.800593e-61
MsaG036109	MsaG030553	0.841198	1.018555e-57	4.128996e-55
MsaG039197	MsaG030553	0.870568	2.693518e-66	3.196226e-63
MsaG040428	MsaG030553	0.854415	2.411325e-61	1.525705e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG030553	MtrunA17_Chr7g0228531	56.250	128	49	4	121	248	219	339	2.42e-37	136
MsaG030553	MtrunA17_Chr3g0117511	54.264	129	53	3	121	249	182	304	3.26e-37	136
MsaG030553	MtrunA17_Chr5g0429661	51.128	133	58	3	121	249	121	250	1.19e-36	133
MsaG030553	MtrunA17_Chr4g0058991	51.493	134	57	3	117	249	204	330	9.55e-36	132
MsaG030553	MtrunA17_Chr7g0228481	53.125	128	53	3	121	248	219	339	2.62e-35	131
MsaG030553	MtrunA17_Chr7g0228401	45.752	153	54	4	120	248	253	400	1.48e-33	127
MsaG030553	MtrunA17_Chr1g0177901	54.310	116	48	3	133	248	5	115	8.58e-32	116
MsaG030553	MtrunA17_Chr7g0233061	46.923	130	63	3	120	249	178	301	3.65e-28	110
MsaG030553	MtrunA17_Chr4g0022901	40.517	116	68	1	112	226	4	119	4.51e-26	103
MsaG030553	MtrunA17_Chr4g0022911	39.655	116	69	1	112	226	4	119	1.33e-25	102
MsaG030553	MtrunA17_Chr7g0238631	42.969	128	62	4	97	223	96	213	1.36e-25	105
MsaG030553	MtrunA17_Chr4g0008551	40.984	122	71	1	121	242	37	157	1.84e-25	103
MsaG030553	MtrunA17_Chr4g0053431	39.130	115	69	1	121	235	4	117	3.82e-25	100
MsaG030553	MtrunA17_Chr3g0139671	46.602	103	54	1	121	223	84	185	5.34e-25	103
MsaG030553	MtrunA17_Chr5g0397841	50.515	97	47	1	121	217	109	204	6.78e-25	103
MsaG030553	MtrunA17_Chr1g0157731	44.660	103	56	1	121	223	90	191	6.87e-25	103
MsaG030553	MtrunA17_Chr4g0022891	35.766	137	80	1	112	240	4	140	1.31e-24	98.6
MsaG030553	MtrunA17_Chr4g0022931	36.170	141	82	2	112	244	4	144	2.23e-24	98.6
MsaG030553	MtrunA17_Chr3g0133601	42.202	109	62	1	116	224	31	138	7.26e-24	96.3
MsaG030553	MtrunA17_Chr2g0281071	41.748	103	60	0	125	227	18	120	1.01e-23	98.2
MsaG030553	MtrunA17_Chr4g0037141	41.071	112	66	0	112	223	4	115	1.12e-23	97.1
MsaG030553	MtrunA17_Chr5g0401731	42.718	103	58	1	121	223	14	115	1.26e-23	97.8
MsaG030553	MtrunA17_Chr4g0048511	39.316	117	70	1	112	227	4	120	1.63e-23	97.8
MsaG030553	MtrunA17_Chr5g0410961	37.931	116	72	0	112	227	4	119	2.09e-23	97.4
MsaG030553	MtrunA17_Chr2g0309911	41.346	104	61	0	122	225	13	116	2.28e-23	96.7
MsaG030553	MtrunA17_Chr8g0385321	37.500	112	70	0	112	223	4	115	3.16e-23	96.3
MsaG030553	MtrunA17_Chr2g0323351	39.130	115	70	0	112	226	4	118	4.32e-23	94.7
MsaG030553	MtrunA17_Chr3g0099131	44.000	100	55	1	125	223	46	145	5.13e-23	97.8
MsaG030553	MtrunA17_Chr2g0323411	39.286	112	68	0	112	223	4	115	5.89e-23	95.9
MsaG030553	MtrunA17_Chr5g0435101	40.000	115	69	0	113	227	4	118	7.09e-23	93.2
MsaG030553	MtrunA17_Chr3g0080861	41.818	110	62	2	115	222	31	140	1.36e-22	96.7
MsaG030553	MtrunA17_Chr4g0055981	34.247	146	96	0	73	218	8	153	1.76e-22	92.8
MsaG030553	MtrunA17_Chr8g0342541	37.615	109	68	0	115	223	7	115	2.05e-22	94.7
MsaG030553	MtrunA17_Chr4g0022881	41.121	107	63	0	112	218	4	110	2.14e-22	92.4
MsaG030553	MtrunA17_Chr4g0044421	43.810	105	53	2	125	226	17	118	3.42e-22	90.9
MsaG030553	MtrunA17_Chr3g0115821	37.069	116	73	0	112	227	4	119	3.48e-22	94.0
MsaG030553	MtrunA17_Chr6g0452271	38.261	115	71	0	113	227	5	119	4.94e-22	93.6
MsaG030553	MtrunA17_Chr8g0346561	40.650	123	66	1	112	234	4	119	6.54e-22	92.4
MsaG030553	MtrunA17_Chr2g0311221	39.252	107	65	0	112	218	6	112	7.64e-22	92.8
MsaG030553	MtrunA17_Chr2g0330041	36.697	109	69	0	115	223	7	115	1.36e-21	93.2
MsaG030553	MtrunA17_Chr7g0275911	41.121	107	63	0	112	218	4	110	1.57e-21	90.9
MsaG030553	MtrunA17_Chr1g0203411	39.316	117	68	1	112	225	4	120	1.73e-21	91.3
MsaG030553	MtrunA17_Chr6g0454921	41.414	99	57	1	121	219	14	111	1.75e-21	89.7
MsaG030553	MtrunA17_Chr4g0039971	37.931	116	72	0	112	227	5	120	1.92e-21	92.0
MsaG030553	MtrunA17_Chr8g0342521	36.697	109	69	0	115	223	7	115	2.18e-21	92.0
MsaG030553	MtrunA17_Chr7g0228231	37.692	130	71	2	113	242	12	131	3.12e-21	89.0
MsaG030553	MtrunA17_Chr3g0088461	38.532	109	67	0	115	223	17	125	3.33e-21	91.3
MsaG030553	MtrunA17_Chr8g0354661	42.424	99	57	0	125	223	42	140	3.73e-21	92.4
MsaG030553	MtrunA17_Chr1g0151941	36.667	120	75	1	112	230	4	123	3.75e-21	89.7
MsaG030553	MtrunA17_Chr3g0131121	37.500	112	70	0	112	223	4	115	4.13e-21	90.5
MsaG030553	MtrunA17_Chr5g0416341	39.024	123	72	3	125	245	29	150	5.00e-21	92.0
MsaG030553	MtrunA17_Chr5g0397231	37.500	104	65	0	115	218	7	110	7.52e-21	90.1
MsaG030553	MtrunA17_Chr4g0054391	37.097	124	77	1	112	234	4	127	8.57e-21	89.4
MsaG030553	MtrunA17_Chr2g0322521	45.536	112	59	2	114	223	22	133	1.13e-20	90.5
MsaG030553	MtrunA17_Chr5g0437321	43.434	99	55	1	121	219	18	115	1.14e-20	89.0
MsaG030553	MtrunA17_Chr1g0168661	40.000	100	60	0	125	224	26	125	1.45e-20	88.2
MsaG030553	MtrunA17_Chr8g0342481	36.607	112	70	1	115	225	7	118	1.62e-20	90.1
MsaG030553	MtrunA17_Chr1g0186061	38.938	113	61	1	125	237	25	129	1.75e-20	87.8
MsaG030553	MtrunA17_Chr2g0328771	38.384	99	61	0	125	223	25	123	2.69e-20	88.6
MsaG030553	MtrunA17_Chr6g0460661	42.308	104	59	1	125	228	19	121	2.75e-20	85.1
MsaG030553	MtrunA17_Chr1g0193371	36.364	99	63	0	125	223	17	115	2.77e-20	89.0
MsaG030553	MtrunA17_Chr1g0167691	39.252	107	65	0	112	218	4	110	2.96e-20	87.4
MsaG030553	MtrunA17_Chr3g0135311	34.815	135	81	2	112	239	4	138	3.08e-20	88.6
MsaG030553	MtrunA17_Chr1g0152011	36.667	120	75	1	112	230	4	123	3.36e-20	88.6
MsaG030553	MtrunA17_Chr7g0217741	34.483	116	76	0	112	227	4	119	3.58e-20	87.8
MsaG030553	MtrunA17_Chr4g0028311	36.752	117	73	1	112	227	4	120	4.48e-20	87.8
MsaG030553	MtrunA17_Chr3g0103281	38.739	111	68	0	113	223	5	115	4.58e-20	87.8
MsaG030553	MtrunA17_Chr5g0400821	35.772	123	78	1	112	233	4	126	4.84e-20	87.8
MsaG030553	MtrunA17_Chr1g0194301	38.835	103	63	0	125	227	38	140	4.84e-20	87.0
MsaG030553	MtrunA17_Chr6g0450101	37.838	111	64	1	108	218	7	112	5.57e-20	85.5
MsaG030553	MtrunA17_Chr1g0154031	42.553	94	54	0	125	218	81	174	6.34e-20	88.6
MsaG030553	MtrunA17_Chr1g0167661	40.909	110	59	2	112	218	4	110	7.14e-20	86.3
MsaG030553	MtrunA17_Chr6g0453471	34.483	116	76	0	112	227	4	119	7.35e-20	87.8
MsaG030553	MtrunA17_Chr2g0327351	38.889	108	65	1	112	218	4	111	8.69e-20	87.0
MsaG030553	MtrunA17_Chr1g0187761	40.187	107	64	0	112	218	4	110	8.89e-20	85.9
MsaG030553	MtrunA17_Chr4g0057031	35.652	115	74	0	113	227	5	119	8.89e-20	86.3
MsaG030553	MtrunA17_Chr5g0417821	37.719	114	70	1	115	227	1	114	9.43e-20	86.7
MsaG030553	MtrunA17_Chr8g0387421	36.538	104	66	0	115	218	7	110	1.01e-19	87.0
MsaG030553	MtrunA17_Chr1g0209661	33.077	130	87	0	98	227	5	134	1.54e-19	86.3
MsaG030553	MtrunA17_Chr7g0240821	41.071	112	64	1	125	234	6	117	1.84e-19	84.7
MsaG030553	MtrunA17_Chr7g0264641	35.897	117	74	1	112	227	4	120	1.84e-19	85.5
MsaG030553	MtrunA17_Chr4g0013361	37.273	110	68	1	114	222	4	113	2.00e-19	85.9
MsaG030553	MtrunA17_Chr8g0362231	38.938	113	67	2	125	236	25	136	2.14e-19	87.0
MsaG030553	MtrunA17_Chr3g0117091	34.343	99	65	0	125	223	17	115	2.19e-19	86.3
MsaG030553	MtrunA17_Chr4g0068061	34.400	125	82	0	112	236	4	128	2.57e-19	85.9
MsaG030553	MtrunA17_Chr4g0042671	31.293	147	99	1	112	256	4	150	2.83e-19	86.7
MsaG030553	MtrunA17_Chr1g0211161	34.343	99	65	0	125	223	18	116	2.87e-19	84.0
MsaG030553	MtrunA17_Chr4g0070641	35.156	128	83	0	112	239	4	131	3.19e-19	82.4
MsaG030553	MtrunA17_Chr1g0180391	39.362	94	57	0	125	218	24	117	3.34e-19	84.0
MsaG030553	MtrunA17_Chr4g0070611	35.156	128	83	0	112	239	4	131	4.19e-19	85.1
MsaG030553	MtrunA17_Chr7g0261281	39.252	107	65	0	112	218	4	110	5.20e-19	84.3
MsaG030553	MtrunA17_Chr7g0271241	37.634	93	58	0	125	217	17	109	6.18e-19	85.5
MsaG030553	MtrunA17_Chr1g0192411	40.000	100	60	0	125	224	17	116	7.01e-19	85.5
MsaG030553	MtrunA17_Chr8g0343831	42.553	94	54	0	125	218	13	106	7.54e-19	83.6
MsaG030553	MtrunA17_Chr1g0193801	34.343	99	65	0	125	223	17	115	9.66e-19	84.7
MsaG030553	MtrunA17_Chr7g0228891	38.462	117	69	3	113	228	5	119	1.03e-18	83.2
MsaG030553	MtrunA17_Chr7g0217221	36.792	106	67	0	113	218	5	110	1.27e-18	83.2
MsaG030553	MtrunA17_Chr7g0270891	35.354	99	64	0	125	223	17	115	1.36e-18	84.3
MsaG030553	MtrunA17_Chr7g0274581	40.426	94	56	0	125	218	17	110	1.47e-18	81.6
MsaG030553	MtrunA17_Chr5g0395281	33.621	116	77	0	112	227	4	119	1.87e-18	83.2
MsaG030553	MtrunA17_Chr4g0032401	38.384	99	61	0	125	223	22	120	2.09e-18	83.6
MsaG030553	MtrunA17_Chr7g0254411	37.736	106	66	0	113	218	5	110	2.39e-18	83.2
MsaG030553	MtrunA17_Chr4g0072751	38.889	108	65	1	112	218	4	111	2.94e-18	83.2
MsaG030553	MtrunA17_Chr4g0060721	33.333	129	79	1	113	241	6	127	3.22e-18	82.8
MsaG030553	MtrunA17_Chr1g0194291	36.893	103	65	0	125	227	26	128	4.03e-18	81.6
MsaG030553	MtrunA17_Chr5g0440781	39.394	99	59	1	125	222	17	115	4.10e-18	80.1
MsaG030553	MtrunA17_Chr6g0453211	36.792	106	67	0	113	218	5	110	4.11e-18	82.4
MsaG030553	MtrunA17_Chr3g0099141	44.156	77	43	0	125	201	45	121	4.11e-18	78.6
MsaG030553	MtrunA17_Chr2g0327821	32.000	150	95	1	125	267	11	160	4.38e-18	80.9
MsaG030553	MtrunA17_Chr8g0334881	41.414	99	57	1	125	222	15	113	4.63e-18	82.4
MsaG030553	MtrunA17_Chr5g0441141	38.235	102	62	1	122	222	14	115	4.79e-18	81.6
MsaG030553	MtrunA17_Chr5g0440761	38.235	102	62	1	122	222	14	115	4.85e-18	81.3
MsaG030553	MtrunA17_Chr8g0349261	37.168	113	70	1	116	227	9	121	6.12e-18	81.6
MsaG030553	MtrunA17_Chr6g0460671	38.136	118	72	1	116	233	93	209	6.94e-18	82.0
MsaG030553	MtrunA17_Chr4g0058631	33.333	99	66	0	125	223	17	115	1.01e-17	81.6
MsaG030553	MtrunA17_Chr3g0092401	35.135	111	72	0	113	223	6	116	1.25e-17	80.9
MsaG030553	MtrunA17_Chr2g0293911	36.792	106	67	0	122	227	26	131	2.55e-17	80.1
MsaG030553	MtrunA17_Chr1g0203441	34.906	106	66	1	125	227	18	123	2.73e-17	79.3
MsaG030553	MtrunA17_Chr6g0480581	43.158	95	53	1	122	216	4	97	2.83e-17	79.0
MsaG030553	MtrunA17_Chr7g0233151	55.263	76	29	2	173	248	1	71	3.28e-17	77.0
MsaG030553	MtrunA17_Chr5g0441131	36.275	102	64	1	122	222	11	112	3.49e-17	77.4
MsaG030553	MtrunA17_Chr6g0470971	31.667	120	82	0	107	226	1	120	4.38e-17	79.0
MsaG030553	MtrunA17_Chr4g0046181	52.055	73	34	1	121	193	220	291	5.55e-17	79.0
MsaG030553	MtrunA17_Chr5g0434571	34.906	106	69	0	113	218	41	146	1.04e-16	79.0
MsaG030553	MtrunA17_Chr5g0417621	38.053	113	66	2	122	231	134	245	1.14e-16	79.3
MsaG030553	MtrunA17_Chr3g0104491	45.455	77	42	0	173	249	17	93	1.24e-16	77.8
MsaG030553	MtrunA17_Chr4g0042501	37.069	116	69	2	122	234	105	219	1.53e-16	79.0
MsaG030553	MtrunA17_Chr3g0110351	34.906	106	69	0	113	218	5	110	1.57e-16	77.8
MsaG030553	MtrunA17_Chr6g0487491	34.959	123	71	2	112	225	4	126	2.58e-16	76.6
MsaG030553	MtrunA17_Chr3g0121241	33.962	106	70	0	113	218	35	140	2.62e-16	77.0
MsaG030553	MtrunA17_Chr3g0125801	35.294	136	83	3	122	253	16	150	2.81e-16	77.0
MsaG030553	MtrunA17_Chr4g0030881	32.759	116	71	1	115	223	2	117	4.78e-16	75.9
MsaG030553	MtrunA17_Chr4g0068921	39.175	97	59	0	122	218	26	122	7.86e-16	73.9
MsaG030553	MtrunA17_Chr2g0323321	37.079	89	56	0	125	213	16	104	1.96e-15	70.9
MsaG030553	MtrunA17_Chr7g0238651	34.266	143	86	3	122	262	7	143	2.92e-15	74.7
MsaG030553	MtrunA17_Chr1g0194951	37.273	110	63	2	112	218	4	110	4.22e-15	74.3
MsaG030553	MtrunA17_Chr7g0254261	37.168	113	67	2	122	231	89	200	4.90e-15	73.9
MsaG030553	MtrunA17_Chr7g0233161	61.111	54	20	1	121	174	298	350	6.04e-15	73.6
MsaG030553	MtrunA17_Chr7g0220341	37.037	108	65	2	114	218	18	125	6.62e-15	72.8
MsaG030553	MtrunA17_Chr5g0434931	35.577	104	67	0	122	225	37	140	8.61e-15	72.4
MsaG030553	MtrunA17_Chr7g0228991	37.113	97	61	0	122	218	31	127	1.27e-14	72.0
MsaG030553	MtrunA17_Chr8g0360111	35.922	103	66	0	116	218	21	123	1.28e-14	71.6
MsaG030553	MtrunA17_Chr5g0434841	35.714	112	71	1	115	225	14	125	2.71e-14	71.6
MsaG030553	MtrunA17_Chr3g0104501	53.333	60	27	1	115	174	126	184	4.30e-14	69.3
MsaG030553	MtrunA17_Chr8g0342461	37.662	77	47	1	122	197	14	90	1.19e-13	66.6
MsaG030553	MtrunA17_Chr7g0247131	46.032	63	34	0	156	218	14	76	1.50e-13	68.9
MsaG030553	MtrunA17_Chr8g0342471	37.662	77	47	1	122	197	14	90	3.21e-13	65.5
MsaG030553	MtrunA17_Chr5g0434911	33.636	110	72	1	117	225	17	126	3.57e-13	67.8
MsaG030553	MtrunA17_Chr5g0434831	33.036	112	74	1	115	225	1	112	4.27e-13	66.2
MsaG030553	MtrunA17_Chr7g0269831	40.000	110	60	2	112	218	4	110	4.28e-13	68.2
MsaG030553	MtrunA17_Chr8g0342511	34.568	81	53	0	115	195	7	87	6.16e-13	63.5
MsaG030553	MtrunA17_Chr8g0342531	33.735	83	55	0	115	197	7	89	9.65e-13	64.7
MsaG030553	MtrunA17_Chr4g0042611	32.941	85	57	0	112	196	4	88	3.94e-12	60.8
MsaG030553	MtrunA17_Chr5g0395221	35.294	85	55	0	112	196	4	88	6.34e-12	60.5
MsaG030553	MtrunA17_Chr5g0421201	47.436	78	33	2	172	249	9	78	7.68e-12	62.8
MsaG030553	MtrunA17_Chr5g0425591	36.709	79	49	1	125	202	14	92	3.83e-11	58.5
MsaG030553	MtrunA17_Chr5g0434901	42.254	71	41	0	151	221	4	74	4.28e-11	58.9
MsaG030553	MtrunA17_Chr6g0483051	39.130	92	54	2	125	216	123	212	7.68e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG030553	AT3G27785.1	58.879	107	43	1	117	223	184	289	4.33e-38	139
MsaG030553	AT5G58850.1	48.175	137	62	3	121	249	104	239	2.19e-36	134
MsaG030553	AT5G11050.1	50.833	120	58	1	121	240	104	222	3.10e-36	134
MsaG030553	AT4G18770.1	48.529	136	64	3	114	249	209	338	9.07e-36	132
MsaG030553	AT5G40360.1	41.530	183	79	4	67	222	76	257	1.76e-35	130
MsaG030553	AT2G25230.1	48.980	98	49	1	125	222	29	125	3.56e-26	102
MsaG030553	AT3G09370.1	42.754	138	64	5	92	224	104	231	4.35e-26	107
MsaG030553	AT3G09370.2	42.754	138	64	5	92	224	109	236	4.69e-26	107
MsaG030553	AT3G09370.3	42.754	138	64	5	92	224	117	244	4.98e-26	107
MsaG030553	AT5G11510.3	44.660	103	56	1	121	223	80	181	2.49e-25	105
MsaG030553	AT5G11510.1	44.660	103	56	1	121	223	80	181	2.49e-25	105
MsaG030553	AT5G11510.4	44.660	103	56	1	121	223	80	181	2.49e-25	105
MsaG030553	AT5G11510.2	44.660	103	56	1	121	223	80	181	2.99e-25	105
MsaG030553	AT5G11510.5	44.660	103	56	1	121	223	80	181	3.07e-25	105
MsaG030553	AT5G40430.1	45.378	119	63	2	115	233	47	163	3.13e-25	100
MsaG030553	AT5G02320.1	42.188	128	63	4	97	223	110	227	3.69e-25	104
MsaG030553	AT5G02320.2	42.188	128	63	4	97	223	110	227	3.69e-25	104
MsaG030553	AT5G02320.3	42.188	128	63	4	97	223	50	167	4.90e-25	103
MsaG030553	AT4G38620.1	42.105	114	66	0	112	225	4	117	3.01e-24	99.0
MsaG030553	AT3G11440.2	44.000	100	55	1	125	223	46	145	4.07e-24	101
MsaG030553	AT4G32730.5	44.660	103	56	1	121	223	86	187	5.66e-24	101
MsaG030553	AT4G32730.4	44.660	103	56	1	121	223	86	187	5.66e-24	101
MsaG030553	AT4G32730.3	44.660	103	56	1	121	223	86	187	5.66e-24	101
MsaG030553	AT4G32730.2	44.660	103	56	1	121	223	86	187	5.66e-24	101
MsaG030553	AT4G32730.1	44.660	103	56	1	121	223	86	187	8.89e-24	100
MsaG030553	AT3G11440.3	44.000	100	55	1	125	223	46	145	9.08e-24	100
MsaG030553	AT3G11440.4	44.000	100	55	1	125	223	46	145	9.08e-24	100
MsaG030553	AT3G11440.1	44.000	100	55	1	125	223	46	145	9.08e-24	100
MsaG030553	AT1G22640.1	41.964	112	65	0	112	223	4	115	1.08e-23	97.1
MsaG030553	AT4G34990.1	41.176	119	67	1	112	230	4	119	1.14e-23	97.4
MsaG030553	AT2G32460.2	48.000	100	51	1	125	223	11	110	1.26e-23	99.8
MsaG030553	AT2G32460.1	48.000	100	51	1	125	223	23	122	1.38e-23	99.8
MsaG030553	AT1G35515.1	36.090	133	79	1	112	244	4	130	2.52e-23	94.7
MsaG030553	AT4G21440.1	41.748	103	60	0	125	227	17	119	2.67e-23	97.4
MsaG030553	AT1G74430.1	41.176	102	60	0	122	223	14	115	3.11e-23	95.9
MsaG030553	AT4G09460.1	41.071	112	66	0	112	223	4	115	4.03e-23	94.7
MsaG030553	AT5G52600.1	45.631	103	56	0	116	218	8	110	4.99e-23	94.0
MsaG030553	AT4G05100.1	38.462	117	71	1	112	227	4	120	5.11e-23	96.3
MsaG030553	AT3G55730.1	43.925	107	59	1	121	227	55	160	1.05e-22	96.7
MsaG030553	AT5G06100.1	40.741	108	62	2	118	223	29	136	1.32e-22	96.7
MsaG030553	AT5G06100.5	40.741	108	62	2	118	223	29	136	2.53e-22	96.3
MsaG030553	AT5G06100.2	40.741	108	62	2	118	223	29	136	2.53e-22	96.3
MsaG030553	AT5G06100.3	40.741	108	62	2	118	223	29	136	2.53e-22	96.3
MsaG030553	AT5G06100.4	40.741	108	62	2	118	223	29	136	2.53e-22	96.3
MsaG030553	AT4G28110.1	37.719	114	71	0	112	225	4	117	3.24e-22	93.6
MsaG030553	AT3G12720.1	40.196	102	61	0	122	223	24	125	4.31e-22	93.6
MsaG030553	AT4G37260.1	42.991	107	59	2	121	226	12	117	6.72e-22	93.2
MsaG030553	AT1G56160.1	38.318	107	66	0	112	218	6	112	6.94e-22	92.8
MsaG030553	AT4G26930.1	41.837	98	57	0	125	222	24	121	7.39e-22	94.0
MsaG030553	AT2G16720.1	40.179	112	67	0	112	223	4	115	7.47e-22	92.4
MsaG030553	AT5G55020.1	41.837	98	57	0	125	222	31	128	7.62e-22	95.1
MsaG030553	AT1G16490.1	37.931	116	71	1	112	226	6	121	1.22e-21	91.7
MsaG030553	AT3G13890.2	36.697	109	69	0	115	223	7	115	1.38e-21	92.8
MsaG030553	AT3G02940.2	37.069	116	73	0	112	227	4	119	1.38e-21	92.4
MsaG030553	AT1G34670.1	38.835	103	63	0	125	227	17	119	1.45e-21	92.8
MsaG030553	AT3G02940.1	37.069	116	73	0	112	227	4	119	2.03e-21	92.0
MsaG030553	AT3G02940.3	37.069	116	73	0	112	227	4	119	2.03e-21	92.0
MsaG030553	AT3G01140.1	35.252	139	89	1	89	227	25	162	2.40e-21	92.8
MsaG030553	AT3G09230.1	41.964	112	64	1	121	232	54	164	3.53e-21	92.0
MsaG030553	AT5G10280.1	39.806	103	62	0	125	227	17	119	3.67e-21	91.7
MsaG030553	AT2G47190.1	40.541	111	66	0	125	235	25	135	3.77e-21	90.5
MsaG030553	AT1G57560.2	35.965	114	70	1	125	238	17	127	4.36e-21	90.1
MsaG030553	AT1G48000.1	42.424	99	56	1	121	218	32	130	4.86e-21	89.4
MsaG030553	AT5G07700.1	40.000	105	63	0	122	226	14	118	6.16e-21	90.9
MsaG030553	AT5G07700.2	40.000	105	63	0	122	226	14	118	6.16e-21	90.9
MsaG030553	AT5G26660.1	37.374	99	62	0	125	223	17	115	6.19e-21	91.3
MsaG030553	AT1G57560.1	35.965	114	70	1	125	238	17	127	7.20e-21	90.5
MsaG030553	AT3G28470.1	36.792	106	67	0	113	218	5	110	7.57e-21	90.5
MsaG030553	AT3G01140.2	36.207	116	74	0	112	227	4	119	8.99e-21	90.5
MsaG030553	AT5G65230.1	34.483	116	76	0	112	227	4	119	9.82e-21	90.1
MsaG030553	AT3G24310.1	41.000	100	59	0	125	224	23	122	1.10e-20	89.0
MsaG030553	AT5G67300.1	39.623	106	63	1	118	223	2	106	1.12e-20	89.7
MsaG030553	AT5G16770.4	39.806	103	62	0	125	227	17	119	1.13e-20	90.1
MsaG030553	AT5G16770.3	39.806	103	62	0	125	227	17	119	1.13e-20	90.1
MsaG030553	AT2G23290.1	41.748	103	59	1	121	223	12	113	1.17e-20	89.7
MsaG030553	AT5G16770.1	39.806	103	62	0	125	227	17	119	1.45e-20	89.7
MsaG030553	AT5G16770.2	39.806	103	62	0	125	227	17	119	1.45e-20	89.7
MsaG030553	AT1G79180.1	38.318	107	66	0	112	218	6	112	1.59e-20	89.0
MsaG030553	AT5G15310.4	34.483	116	76	0	112	227	4	119	1.78e-20	88.2
MsaG030553	AT1G09540.1	37.374	99	62	0	125	223	17	115	1.81e-20	90.1
MsaG030553	AT4G17785.2	33.333	117	77	1	112	227	4	120	2.02e-20	89.7
MsaG030553	AT5G56110.1	39.640	111	67	0	113	223	5	115	2.42e-20	89.0
MsaG030553	AT4G17785.1	33.333	117	77	1	112	227	4	120	2.44e-20	89.4
MsaG030553	AT5G14750.1	43.617	94	53	0	125	218	21	114	2.63e-20	86.7
MsaG030553	AT5G07690.1	40.206	97	58	0	122	218	14	110	2.80e-20	89.0
MsaG030553	AT5G57620.1	34.959	123	79	1	112	233	4	126	3.06e-20	89.0
MsaG030553	AT3G27810.1	38.136	118	68	1	125	242	25	137	3.90e-20	86.7
MsaG030553	AT5G61420.2	39.048	105	64	0	122	226	14	118	4.35e-20	89.0
MsaG030553	AT3G01530.1	40.816	98	58	0	125	222	30	127	4.99e-20	85.9
MsaG030553	AT4G37780.1	37.168	113	70	1	112	223	4	116	7.23e-20	87.4
MsaG030553	AT5G12870.1	37.374	99	62	0	125	223	23	121	7.62e-20	87.0
MsaG030553	AT5G15310.2	34.483	116	76	0	112	227	4	119	8.12e-20	87.4
MsaG030553	AT1G18710.1	35.294	102	66	0	122	223	14	115	8.37e-20	86.7
MsaG030553	AT5G40330.1	42.553	94	54	0	125	218	17	110	8.75e-20	85.5
MsaG030553	AT2G26960.1	40.816	98	58	0	125	222	25	122	8.95e-20	88.6
MsaG030553	AT5G15310.1	34.483	116	76	0	112	227	4	119	9.83e-20	87.4
MsaG030553	AT1G63910.1	36.538	104	66	0	115	218	7	110	1.07e-19	87.8
MsaG030553	AT3G27920.1	43.617	94	53	0	125	218	19	112	1.24e-19	85.5
MsaG030553	AT4G13480.1	39.000	100	61	0	125	224	11	110	1.28e-19	85.9
MsaG030553	AT3G50060.1	36.893	103	64	1	121	223	5	106	1.30e-19	86.7
MsaG030553	AT3G08500.1	37.963	108	67	0	116	223	26	133	1.36e-19	87.4
MsaG030553	AT3G23250.1	35.878	131	83	1	112	242	4	133	1.95e-19	85.9
MsaG030553	AT5G54230.1	38.835	103	63	0	125	227	17	119	2.20e-19	86.3
MsaG030553	AT5G60890.1	38.235	102	63	0	122	223	14	115	2.86e-19	85.5
MsaG030553	AT5G40350.1	41.304	92	54	0	125	216	22	113	2.86e-19	84.0
MsaG030553	AT3G13890.1	33.898	118	69	1	115	223	7	124	4.57e-19	85.9
MsaG030553	AT4G01680.3	34.343	99	65	0	125	223	17	115	5.30e-19	84.0
MsaG030553	AT5G59780.3	37.143	105	66	0	125	229	13	117	6.08e-19	83.6
MsaG030553	AT3G46130.1	38.095	105	65	0	125	229	14	118	6.49e-19	84.0
MsaG030553	AT3G29020.1	36.364	121	72	2	122	242	65	180	7.13e-19	83.6
MsaG030553	AT3G61250.1	34.783	115	75	0	113	227	5	119	7.28e-19	84.7
MsaG030553	AT4G01680.1	34.343	99	65	0	125	223	17	115	7.37e-19	85.1
MsaG030553	AT3G29020.2	36.364	121	72	2	122	242	67	182	7.54e-19	84.7
MsaG030553	AT5G17800.1	39.316	117	70	1	115	231	86	201	8.16e-19	84.7
MsaG030553	AT3G12820.1	37.383	107	67	0	112	218	6	112	8.51e-19	83.2
MsaG030553	AT5G62470.2	34.109	129	81	1	113	241	5	129	9.18e-19	85.1
MsaG030553	AT1G18570.1	38.095	105	65	0	122	226	15	119	1.04e-18	84.7
MsaG030553	AT4G22680.1	34.783	115	75	0	113	227	5	119	1.17e-18	83.6
MsaG030553	AT2G36890.1	36.441	118	74	1	112	228	4	121	1.23e-18	84.0
MsaG030553	AT1G14350.2	37.500	112	67	2	125	234	28	138	1.54e-18	85.1
MsaG030553	AT1G14350.1	37.500	112	67	2	125	234	28	138	1.54e-18	85.1
MsaG030553	AT1G74080.1	34.058	138	85	2	122	259	14	145	1.76e-18	84.0
MsaG030553	AT5G23000.1	39.130	115	65	3	112	223	4	116	1.86e-18	84.0
MsaG030553	AT3G13540.1	35.294	119	73	1	112	226	15	133	1.91e-18	82.4
MsaG030553	AT3G49690.1	35.537	121	77	1	112	231	4	124	2.26e-18	83.6
MsaG030553	AT2G36890.2	36.441	118	74	1	112	228	45	162	2.46e-18	83.6
MsaG030553	AT3G30210.1	41.304	92	54	0	125	216	32	123	2.83e-18	82.4
MsaG030553	AT1G74650.1	35.433	127	80	1	113	239	5	129	3.34e-18	83.2
MsaG030553	AT1G69560.2	37.302	126	75	2	116	238	117	241	3.84e-18	83.2
MsaG030553	AT4G00540.2	45.545	101	52	2	125	222	106	206	3.88e-18	83.6
MsaG030553	AT5G65790.1	35.537	121	77	1	112	231	4	124	3.94e-18	83.6
MsaG030553	AT2G31180.1	37.383	107	67	0	112	218	4	110	4.21e-18	81.6
MsaG030553	AT1G69560.1	37.302	126	75	2	116	238	101	225	4.41e-18	82.8
MsaG030553	AT2G26950.1	34.906	106	69	0	117	222	13	118	5.00e-18	83.2
MsaG030553	AT3G47600.1	32.812	128	86	0	113	240	5	132	5.01e-18	82.8
MsaG030553	AT5G49620.1	40.777	103	60	1	115	216	20	122	5.49e-18	82.4
MsaG030553	AT1G25340.1	37.864	103	64	0	125	227	23	125	5.56e-18	82.0
MsaG030553	AT4G00540.1	45.545	101	52	2	125	222	104	204	6.38e-18	83.2
MsaG030553	AT3G48920.1	41.837	98	57	0	125	222	23	120	7.75e-18	81.3
MsaG030553	AT1G08810.1	36.220	127	78	1	113	236	5	131	8.06e-18	81.3
MsaG030553	AT1G68320.1	34.906	106	69	0	122	227	21	126	1.06e-17	81.3
MsaG030553	AT4G12350.1	33.913	115	76	0	113	227	5	119	1.14e-17	81.3
MsaG030553	AT5G62470.1	34.109	129	80	2	113	241	5	128	1.17e-17	82.0
MsaG030553	AT3G53200.1	37.838	111	68	1	114	223	2	112	1.34e-17	80.1
MsaG030553	AT1G17950.1	38.525	122	72	2	122	243	5	123	1.45e-17	80.1
MsaG030553	AT1G06180.1	39.362	94	57	0	125	218	17	110	1.48e-17	80.1
MsaG030553	AT1G26780.1	38.938	113	65	2	122	231	98	209	1.57e-17	80.5
MsaG030553	AT2G47460.1	36.134	119	76	0	112	230	4	122	1.76e-17	81.6
MsaG030553	AT5G14340.1	33.333	111	74	0	113	223	17	127	1.76e-17	80.5
MsaG030553	AT1G26780.2	38.938	113	65	2	122	231	98	209	1.82e-17	81.3
MsaG030553	AT2G39880.1	38.679	106	64	1	121	226	49	153	1.83e-17	81.6
MsaG030553	AT5G35550.1	39.216	102	62	0	122	223	16	117	2.05e-17	80.1
MsaG030553	AT2G02820.2	37.273	110	67	2	125	233	33	141	2.48e-17	81.6
MsaG030553	AT3G62610.1	35.294	119	77	0	112	230	4	122	2.85e-17	80.9
MsaG030553	AT1G66230.1	32.576	132	85	1	113	240	5	136	2.91e-17	79.7
MsaG030553	AT2G02820.1	37.273	110	67	2	125	233	33	141	3.45e-17	81.3
MsaG030553	AT3G28910.1	35.849	106	68	0	113	218	5	110	4.55e-17	79.7
MsaG030553	AT5G39700.1	38.710	124	70	3	125	244	59	180	4.62e-17	77.4
MsaG030553	AT4G01680.2	33.333	111	62	1	125	223	17	127	4.69e-17	80.1
MsaG030553	AT4G33450.1	37.903	124	69	2	114	237	11	126	4.97e-17	78.6
MsaG030553	AT2G02820.3	37.273	110	67	2	125	233	33	141	5.66e-17	79.7
MsaG030553	AT5G62320.1	37.273	110	62	1	125	227	18	127	6.35e-17	78.2
MsaG030553	AT5G52260.1	40.426	94	56	0	125	218	17	110	9.80e-17	78.2
MsaG030553	AT5G49330.1	40.000	110	60	2	112	218	4	110	1.45e-16	78.6
MsaG030553	AT1G66370.1	32.374	139	70	1	125	239	13	151	1.66e-16	77.0
MsaG030553	AT1G25340.2	36.893	103	60	1	125	227	23	120	1.91e-16	77.4
MsaG030553	AT1G25340.3	36.893	103	60	1	125	227	23	120	3.16e-16	77.4
MsaG030553	AT1G56650.1	37.607	117	71	1	122	236	10	126	3.70e-16	76.3
MsaG030553	AT4G25560.1	37.234	94	59	0	125	218	15	108	1.23e-15	75.5
MsaG030553	AT5G26660.2	37.363	91	45	1	133	223	6	84	1.72e-15	75.5
MsaG030553	AT5G16600.1	34.906	106	69	0	113	218	5	110	2.04e-15	75.1
MsaG030553	AT1G79180.2	29.286	140	66	1	112	218	6	145	2.68e-15	75.1
MsaG030553	AT5G14750.3	48.529	68	35	0	151	218	13	80	2.96e-15	72.0
MsaG030553	AT3G60460.1	37.374	99	61	1	125	222	16	114	3.19e-15	74.3
MsaG030553	AT3G06490.1	38.947	95	58	0	122	216	21	115	3.31e-15	74.7
MsaG030553	AT1G73410.2	39.091	110	66	1	122	231	6	114	4.18e-15	72.4
MsaG030553	AT1G73410.1	39.091	110	66	1	122	231	6	114	6.94e-15	72.8
MsaG030553	AT1G66380.1	40.426	94	56	0	125	218	13	106	9.70e-15	70.1
MsaG030553	AT3G27810.2	41.379	87	46	1	156	242	7	88	1.17e-14	70.9
MsaG030553	AT5G49620.2	35.897	117	60	2	115	216	20	136	1.29e-14	72.8
MsaG030553	AT5G40350.2	47.541	61	32	0	156	216	8	68	1.07e-13	67.8
MsaG030553	AT2G37630.1	36.449	107	66	1	122	226	4	110	2.73e-13	69.3
MsaG030553	AT5G35550.2	42.105	76	44	0	148	223	45	120	3.47e-13	68.2
MsaG030553	AT3G12820.2	46.032	63	34	0	156	218	2	64	5.08e-13	66.6
MsaG030553	AT1G66390.1	39.175	97	59	0	122	218	10	106	7.30e-13	67.0
MsaG030553	AT5G59780.2	39.189	74	45	0	156	229	23	96	1.30e-12	65.9
MsaG030553	AT3G18100.1	36.957	92	57	1	125	216	549	639	1.75e-12	67.8
MsaG030553	AT3G18100.1	35.052	97	60	3	121	216	494	588	4.97e-12	66.2
MsaG030553	AT3G18100.4	36.957	92	57	1	125	216	388	478	1.83e-12	67.4
MsaG030553	AT3G18100.4	35.052	97	60	3	121	216	333	427	6.22e-12	65.9
MsaG030553	AT3G18100.2	36.957	92	57	1	125	216	336	426	2.07e-12	67.4
MsaG030553	AT3G18100.2	35.052	97	60	3	121	216	281	375	7.42e-12	65.5
MsaG030553	AT3G18100.3	36.957	92	57	1	125	216	501	591	2.19e-12	67.4
MsaG030553	AT3G18100.3	35.052	97	60	3	121	216	446	540	7.15e-12	65.9
MsaG030553	AT3G46130.4	39.189	74	45	0	156	229	23	96	2.34e-12	65.5
MsaG030553	AT3G46130.3	39.189	74	45	0	156	229	13	86	2.53e-12	65.1
MsaG030553	AT3G53200.2	42.647	68	39	0	156	223	12	79	6.89e-12	63.5
MsaG030553	AT1G22640.3	48.276	58	30	0	166	223	1	58	1.85e-11	62.4
MsaG030553	AT3G47600.2	35.294	85	55	0	156	240	42	126	2.46e-11	63.5

Find 53 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATATAGGGAACTTGTGAAAT+TGG	0.218457	6:+9942555	MsaT030553.1:intron
CGCTCCAAACATGGATATTC+TGG	0.220757	6:-9942012	None:intergenic
TTCAAGATATTGGGATTATT+AGG	0.258151	6:-9942141	None:intergenic
TAGACGCATGTTCAAGATAT+TGG	0.258678	6:-9942151	None:intergenic
TCATCTCCGTCCAAACATTA+AGG	0.270772	6:+9942669	MsaT030553.1:CDS
CTCGATGCTTTGGCGTCGTT+TGG	0.330322	6:-9944798	None:intergenic
GGAACATAAACCTTAATGTT+TGG	0.342814	6:-9942679	None:intergenic
TTCATCAATCTTGCAATTTG+AGG	0.352946	6:-9942604	None:intergenic
AGACGCATGTTCAAGATATT+GGG	0.359386	6:-9942150	None:intergenic
TCCTCAACATCTCGATGCTT+TGG	0.368670	6:-9944808	None:intergenic
TATTAGGTACATTCAAGATA+TGG	0.374833	6:-9942125	None:intergenic
TGAAATTTCAAAGAGATTGC+TGG	0.395226	6:+9944736	MsaT030553.1:CDS
AAATGGATGACATGCATGTT+AGG	0.397171	6:-9942177	None:intergenic
TATTGATGTAGAAGGGTTCA+TGG	0.397284	6:+9944654	MsaT030553.1:intron
TCAGTATCATATCTTCTTCA+AGG	0.397738	6:-9944679	None:intergenic
GATGCTTTGGCGTCGTTTGG+TGG	0.406732	6:-9944795	None:intergenic
ATAAAATCCCATTGGAAAGT+TGG	0.407424	6:+9944701	MsaT030553.1:CDS
CAAAACAGTGTCGTGATAGA+TGG	0.437524	6:+9942641	MsaT030553.1:CDS
GAACGAGAATTGACCTTTGT+GGG	0.444047	6:-9942047	None:intergenic
ATGATGACATGCCACATAAA+TGG	0.444183	6:-9942194	None:intergenic
GCATAAGCTTTGTTGACGTC+TGG	0.444678	6:-9942294	None:intergenic
TTTCAAAGAGATTGCTGGAT+AGG	0.468178	6:+9944741	MsaT030553.1:CDS
CTTGATCAATTTCTTACGAT+GGG	0.472672	6:-9946338	None:intergenic
TTTGTTTCCAACTTTCCAAT+GGG	0.474090	6:-9944708	None:intergenic
ATTGGAAAGTTGGAAACAAA+TGG	0.490744	6:+9944711	MsaT030553.1:CDS
TTGTTGACGTCTGGTGCAAA+TGG	0.494806	6:-9942285	None:intergenic
CATAAACCTTAATGTTTGGA+CGG	0.508200	6:-9942675	None:intergenic
GTCGTTTGGTGGAGTTCCAA+CGG	0.508889	6:-9944784	None:intergenic
ATTTGTTTCCAACTTTCCAA+TGG	0.514112	6:-9944709	None:intergenic
AAGGGATTGTTCTGAGGAGG+TGG	0.523100	6:-9942069	None:intergenic
TCTTGATCAATTTCTTACGA+TGG	0.523644	6:-9946339	None:intergenic
GGAACGAGAATTGACCTTTG+TGG	0.525598	6:-9942048	None:intergenic
TCGAAAGATTGAGAAATGAC+AGG	0.547098	6:-9942225	None:intergenic
GTGAAATTGGTGAACCAACA+TGG	0.548528	6:+9942568	MsaT030553.1:CDS
TGATACTGATAAAATCCCAT+TGG	0.555622	6:+9944693	MsaT030553.1:CDS
TGAATCACACGCTCCAAACA+TGG	0.559827	6:-9942021	None:intergenic
AACAAGGGATTGTTCTGAGG+AGG	0.564533	6:-9942072	None:intergenic
CAGTATCATATCTTCTTCAA+GGG	0.564964	6:-9944678	None:intergenic
ATGCATGTCATCCATTTATG+TGG	0.566202	6:+9942183	MsaT030553.1:CDS
GCCAAAGCATCGAGATGTTG+AGG	0.575821	6:+9944807	MsaT030553.1:CDS
TTGAGATGGTAGTTTAACAA+GGG	0.576755	6:-9942087	None:intergenic
TTTAACAAGGGATTGTTCTG+AGG	0.590649	6:-9942075	None:intergenic
CATGTAAATTAGTGTTGAGA+TGG	0.594522	6:-9942101	None:intergenic
GTTGAGATGGTAGTTTAACA+AGG	0.598487	6:-9942088	None:intergenic
GATCAATTTCTTACGATGGG+AGG	0.603754	6:-9946335	None:intergenic
ACAAAGCTTATGCAATCAGA+AGG	0.606194	6:+9942304	MsaT030553.1:CDS
AGAACTCTGTCAAGAACCGT+TGG	0.613137	6:+9944768	MsaT030553.1:CDS
ATTGCAAGATTGATGAAGCG+AGG	0.667312	6:+9942610	MsaT030553.1:CDS
TGAAATTGGTGAACCAACAT+GGG	0.667572	6:+9942569	MsaT030553.1:CDS
CTTATGCAATCAGAAGGCAA+TGG	0.671225	6:+9942310	MsaT030553.1:CDS
AACGAGAATTGACCTTTGTG+GGG	0.672668	6:-9942046	None:intergenic
AAGGCAATGGACAACCAATG+AGG	0.693483	6:+9942323	MsaT030553.1:CDS
GTGTGATTCATACCCCACAA+AGG	0.701235	6:+9942034	MsaT030553.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	9941958	9946381	9941958	ID=MsaG030553
Chr6	mRNA	9941958	9946381	9941958	ID=MsaT030553.1;Parent=MsaG030553
Chr6	exon	9941958	9942349	9941958	ID=MsaT030553.1.exon1;Parent=MsaT030553.1
Chr6	CDS	9941958	9942349	9941958	ID=cds.MsaT030553.1;Parent=MsaT030553.1
Chr6	exon	9942561	9942690	9942561	ID=MsaT030553.1.exon2;Parent=MsaT030553.1
Chr6	CDS	9942561	9942690	9942561	ID=cds.MsaT030553.1;Parent=MsaT030553.1
Chr6	exon	9944665	9944892	9944665	ID=MsaT030553.1.exon3;Parent=MsaT030553.1
Chr6	CDS	9944665	9944892	9944665	ID=cds.MsaT030553.1;Parent=MsaT030553.1
Chr6	exon	9946325	9946381	9946325	ID=MsaT030553.1.exon4;Parent=MsaT030553.1
Chr6	CDS	9946325	9946381	9946325	ID=cds.MsaT030553.1;Parent=MsaT030553.1

Gene Sequence

>MsaT030553.1

ATGGAACTCAATCTCAACAATCGAGCAAAGCATTCAAACCTTTTGAATCTTTTTCCAGAATATCCATGTTTGGAGCGTGTGATTCATACCCCACAAAGGTCAATTCTCGTTCCACCTCCTCAGAACAATCCCTTGTTAAACTACCATCTCAACACTAATTTACATGACCATATCTTGAATGTACCTAATAATCCCAATATCTTGAACATGCGTCTATCTCCTAACATGCATGTCATCCATTTATGTGGCATGTCATCATCAACATCGCCTGTCATTTCTCAATCTTTCGAAACCAGATGTTTACATCAAAATGCTTTTCTCAACACTCCATTTGCACCAGACGTCAACAAAGCTTATGCAATCAGAAGGCAATGGACAACCAATGAGGATATGGAACTTGTGAAATTGGTGAACCAACATGGGCTGAAAAACTGGCCTCAAATTGCAAGATTGATGAAGCGAGGAAGAAATGCAAAACAGTGTCGTGATAGATGGCTCAATCATCTCCGTCCAAACATTAAGAAGGGTTCATGGACCCTTGAAGAAGATATGATACTGATAAAATCCCATTGGAAAGTTGGAAACAAATGGTCTGAAATTTCAAAGAGATTGCTGGATAGGAGTGAGAACTCTGTCAAGAACCGTTGGAACTCCACCAAACGACGCCAAAGCATCGAGATGTTGAGGAAGCGTAATCGCAATATCACTAATAAAAATGATGGATCGTTGCTTTATGAATACATAAAAATGGGACATCATACCTCCCATCGTAAGAAATTGATCAAGATGCAAACAAAAAAAGTTTAA

Protein sequence

>MsaT030553.1

MELNLNNRAKHSNLLNLFPEYPCLERVIHTPQRSILVPPPQNNPLLNYHLNTNLHDHILNVPNNPNILNMRLSPNMHVIHLCGMSSSTSPVISQSFETRCLHQNAFLNTPFAPDVNKAYAIRRQWTTNEDMELVKLVNQHGLKNWPQIARLMKRGRNAKQCRDRWLNHLRPNIKKGSWTLEEDMILIKSHWKVGNKWSEISKRLLDRSENSVKNRWNSTKRRQSIEMLRKRNRNITNKNDGSLLYEYIKMGHHTSHRKKLIKMQTKKV*