AlfalfaGEDB | MsaG031022

M. sativa ssp. caerulea / MsaG031022

KEGG: K09264
GO: GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008134 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010022 GO:0010073 GO:0010093 GO:0010468 GO:0010556 GO:0010582 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048509 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG031022	sp\|Q8LLR2\|MADS2_VITVI	78.486	251	46	3	1	250	1	244	1.59e-142	402

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG031022	tr\|A0A072U5X0\|A0A072U5X0_MEDTR	100.000	250	0	0	1	250	1	250	0.0	519

TFs/TRs:

Gene ID	Type	Classification
MsaG031022	TF	MADS-MIKC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000005	MsaG031022	0.847280	2.411825e-59	1.192165e-56
MsaG000479	MsaG031022	0.801052	1.808525e-48	2.503907e-46
MsaG000553	MsaG031022	0.803713	5.148709e-49	7.576404e-47
MsaG000842	MsaG031022	0.849061	7.813893e-60	4.101633e-57
MsaG001223	MsaG031022	0.805487	2.205021e-49	3.380905e-47
MsaG001772	MsaG031022	0.841410	8.967472e-58	3.659752e-55
MsaG001828	MsaG031022	0.803367	6.070860e-49	8.861916e-47
MsaG002209	MsaG031022	0.807306	9.154796e-50	1.465236e-47
MsaG002290	MsaG031022	0.864656	2.073694e-64	1.932407e-61
MsaG002405	MsaG031022	0.813569	4.128551e-51	7.699218e-49
MsaG002484	MsaG031022	0.815946	1.235054e-51	2.445433e-49
MsaG002530	MsaG031022	0.865095	1.512948e-64	1.434846e-61
MsaG002975	MsaG031022	0.836919	1.292300e-56	4.585616e-54
MsaG003306	MsaG031022	0.871565	1.268699e-66	1.571347e-63
MsaG003375	MsaG031022	0.809103	3.807090e-50	6.362456e-48
MsaG003740	MsaG031022	0.865680	9.919071e-65	9.628676e-62
MsaG003745	MsaG031022	0.816239	1.062941e-51	2.120399e-49
MsaG003880	MsaG031022	0.831409	3.061884e-55	9.227388e-53
MsaG004420	MsaG031022	0.817884	4.557138e-52	9.483400e-50
MsaG004465	MsaG031022	0.812623	6.644398e-51	1.210092e-48
MsaG004510	MsaG031022	0.853224	5.290000e-61	3.208036e-58
MsaG004669	MsaG031022	0.814683	2.350883e-51	4.508159e-49
MsaG004685	MsaG031022	0.806989	1.067949e-49	1.696502e-47
MsaG004805	MsaG031022	0.856946	4.433872e-62	3.074532e-59
MsaG004820	MsaG031022	0.840173	1.885324e-57	7.399671e-55
MsaG004838	MsaG031022	0.902006	3.496291e-78	2.012744e-74
MsaG005257	MsaG031022	0.852364	9.287268e-61	5.464521e-58
MsaG005282	MsaG031022	0.812509	7.033929e-51	1.277473e-48
MsaG005455	MsaG031022	0.802551	8.933326e-49	1.279818e-46
MsaG005524	MsaG031022	0.828094	1.946274e-54	5.336232e-52
MsaG005664	MsaG031022	0.828613	1.460057e-54	4.062116e-52
MsaG005850	MsaG031022	0.833279	1.059071e-55	3.370843e-53
MsaG005892	MsaG031022	0.815451	1.590267e-51	3.109444e-49
MsaG006021	MsaG031022	0.863081	6.372305e-64	5.579226e-61
MsaG006140	MsaG031022	0.834685	4.729710e-56	1.569485e-53
MsaG006156	MsaG031022	0.848004	1.527606e-59	7.737724e-57
MsaG006325	MsaG031022	0.833595	8.842980e-56	2.840841e-53
MsaG006586	MsaG031022	0.806130	1.618010e-49	2.518700e-47
MsaG006552	MsaG031022	0.836127	2.051489e-56	7.108185e-54
MsaG006563	MsaG031022	0.857500	3.047962e-62	2.157346e-59
MsaG006640	MsaG031022	0.818953	2.616494e-52	5.598175e-50
MsaG006701	MsaG031022	0.829871	7.255369e-55	2.092121e-52
MsaG006813	MsaG031022	0.828029	2.016806e-54	5.519754e-52
MsaG007508	MsaG031022	0.826824	3.910885e-54	1.034801e-51
MsaG007525	MsaG031022	0.803722	5.127913e-49	7.547335e-47
MsaG007546	MsaG031022	0.849031	7.964735e-60	4.176429e-57
MsaG007663	MsaG031022	0.855602	1.094327e-61	7.225931e-59
MsaG007762	MsaG031022	0.819494	1.972939e-52	4.281513e-50
MsaG008183	MsaG031022	0.808455	5.231728e-50	8.607491e-48
MsaG009772	MsaG031022	0.855178	1.452412e-61	9.443331e-59
MsaG010004	MsaG031022	0.848409	1.182470e-59	6.070256e-57
MsaG010148	MsaG031022	0.869017	8.592038e-66	9.556483e-63
MsaG010703	MsaG031022	0.821006	8.915521e-53	2.013819e-50
MsaG011179	MsaG031022	0.823038	3.030995e-53	7.228545e-51
MsaG011401	MsaG031022	0.828753	1.351178e-54	3.773710e-52
MsaG011563	MsaG031022	0.844354	1.490020e-58	6.683847e-56
MsaG011578	MsaG031022	0.868075	1.725630e-65	1.846466e-62
MsaG012310	MsaG031022	0.820702	1.046742e-52	2.345172e-50
MsaG012385	MsaG031022	0.809478	3.166723e-50	5.340413e-48
MsaG012442	MsaG031022	0.876261	3.344420e-68	5.087808e-65
MsaG012595	MsaG031022	0.807338	9.015215e-50	1.444012e-47
MsaG013086	MsaG031022	0.825613	7.570570e-54	1.936761e-51
MsaG013810	MsaG031022	0.871880	9.982051e-67	1.253212e-63
MsaG015070	MsaG031022	0.822441	4.166616e-53	9.777733e-51
MsaG015353	MsaG031022	0.802492	9.184655e-49	1.314039e-46
MsaG015898	MsaG031022	0.852025	1.158484e-60	6.736173e-58
MsaG016376	MsaG031022	0.808714	4.607441e-50	7.628324e-48
MsaG016390	MsaG031022	0.859434	8.129994e-63	6.186608e-60
MsaG016700	MsaG031022	0.831856	2.378572e-55	7.262910e-53
MsaG016706	MsaG031022	0.823920	1.889259e-53	4.614493e-51
MsaG016906	MsaG031022	0.813093	5.247722e-51	9.670241e-49
MsaG017406	MsaG031022	0.809732	2.794395e-50	4.741282e-48
MsaG017498	MsaG031022	0.809508	3.121087e-50	5.267186e-48
MsaG017724	MsaG031022	0.806889	1.121137e-49	1.776745e-47
MsaG017732	MsaG031022	0.808047	6.382850e-50	1.039912e-47
MsaG017764	MsaG031022	0.828588	1.480748e-54	4.116753e-52
MsaG017801	MsaG031022	0.827657	2.476155e-54	6.706410e-52
MsaG017802	MsaG031022	0.809932	2.532717e-50	4.317962e-48
MsaG017905	MsaG031022	0.826279	5.267840e-54	1.372891e-51
MsaG017958	MsaG031022	0.813472	4.335583e-51	8.065533e-49
MsaG018368	MsaG031022	0.807796	7.213806e-50	1.168222e-47
MsaG018783	MsaG031022	0.829768	7.683985e-55	2.209073e-52
MsaG018860	MsaG031022	0.809350	3.373106e-50	5.670318e-48
MsaG018922	MsaG031022	0.811444	1.197393e-50	2.118213e-48
MsaG019269	MsaG031022	0.873658	2.554680e-67	3.463800e-64
MsaG019501	MsaG031022	0.813387	4.525129e-51	8.400279e-49
MsaG019493	MsaG031022	0.843730	2.185635e-58	9.607768e-56
MsaG020191	MsaG031022	0.829773	7.662108e-55	2.203112e-52
MsaG020206	MsaG031022	0.856559	5.758855e-62	3.937755e-59
MsaG020335	MsaG031022	0.908431	4.130038e-81	3.527977e-77
MsaG020593	MsaG031022	0.817731	4.931598e-52	1.022225e-49
MsaG020599	MsaG031022	0.807967	6.638368e-50	1.079448e-47
MsaG020679	MsaG031022	0.837919	7.186240e-57	2.629040e-54
MsaG020894	MsaG031022	0.845238	8.626253e-59	3.983645e-56
MsaG021001	MsaG031022	0.809301	3.455641e-50	5.802133e-48
MsaG021274	MsaG031022	0.834225	6.162695e-56	2.016926e-53
MsaG021317	MsaG031022	0.840939	1.190487e-57	4.786561e-55
MsaG021816	MsaG031022	0.874289	1.566943e-67	2.184258e-64
MsaG022192	MsaG031022	0.818419	3.452934e-52	7.285406e-50
MsaG022216	MsaG031022	0.805829	1.870471e-49	2.891104e-47
MsaG022461	MsaG031022	0.832030	2.155046e-55	6.613905e-53
MsaG022478	MsaG031022	0.830963	3.935747e-55	1.170852e-52
MsaG022554	MsaG031022	0.840687	1.384830e-57	5.523979e-55
MsaG022584	MsaG031022	0.830413	5.356924e-55	1.568791e-52
MsaG023662	MsaG031022	0.871350	1.492907e-66	1.831923e-63
MsaG023666	MsaG031022	0.800590	2.245366e-48	3.076606e-46
MsaG023972	MsaG031022	0.844906	1.059540e-58	4.841101e-56
MsaG024027	MsaG031022	0.841270	9.754614e-58	3.963386e-55
MsaG024144	MsaG031022	0.824298	1.542009e-53	3.805383e-51
MsaG025404	MsaG031022	0.801798	1.274320e-48	1.794470e-46
MsaG026756	MsaG031022	0.831763	2.506460e-55	7.632990e-53
MsaG026770	MsaG031022	0.862415	1.019735e-63	8.698076e-61
MsaG026822	MsaG031022	0.808682	4.681528e-50	7.744948e-48
MsaG026890	MsaG031022	0.846545	3.824747e-59	1.844535e-56
MsaG027127	MsaG031022	0.806573	1.306155e-49	2.054726e-47
MsaG027255	MsaG031022	0.823234	2.729272e-53	6.543493e-51
MsaG027285	MsaG031022	0.838048	6.657575e-57	2.445340e-54
MsaG027309	MsaG031022	0.819501	1.965051e-52	4.265241e-50
MsaG027342	MsaG031022	0.822938	3.197804e-53	7.605598e-51
MsaG027495	MsaG031022	0.849594	5.559545e-60	2.972090e-57
MsaG027630	MsaG031022	0.871793	1.066761e-66	1.334134e-63
MsaG027773	MsaG031022	0.855358	1.288071e-61	8.429622e-59
MsaG027929	MsaG031022	0.806719	1.217287e-49	1.921472e-47
MsaG027969	MsaG031022	0.895095	2.982728e-75	1.154456e-71
MsaG028242	MsaG031022	0.847192	2.548221e-59	1.255906e-56
MsaG028243	MsaG031022	0.829593	8.471697e-55	2.423480e-52
MsaG028255	MsaG031022	0.890179	2.737819e-73	8.143388e-70
MsaG028553	MsaG031022	0.829550	8.676150e-55	2.478875e-52
MsaG028668	MsaG031022	0.800367	2.491684e-48	3.396910e-46
MsaG028787	MsaG031022	0.826566	4.503717e-54	1.183151e-51
MsaG028813	MsaG031022	0.829717	7.906174e-55	2.269645e-52
MsaG028830	MsaG031022	0.850637	2.846652e-60	1.577129e-57
MsaG028832	MsaG031022	0.821897	5.566020e-53	1.287224e-50
MsaG028995	MsaG031022	0.802394	9.621495e-49	1.373462e-46
MsaG029443	MsaG031022	0.848246	1.310673e-59	6.692341e-57
MsaG029702	MsaG031022	0.834460	5.382060e-56	1.773950e-53
MsaG029743	MsaG031022	0.817515	5.513587e-52	1.136544e-49
MsaG029892	MsaG031022	0.875423	6.468155e-68	9.477883e-65
MsaG029875	MsaG031022	0.846172	4.826534e-59	2.299131e-56
MsaG031022	MsaG031612	0.858980	1.111223e-62	8.311766e-60
MsaG031022	MsaG031750	0.844438	1.414701e-58	6.363620e-56
MsaG031022	MsaG032331	0.886155	9.463914e-72	2.294523e-68
MsaG031022	MsaG034436	0.878962	3.860082e-69	6.642087e-66
MsaG031022	MsaG034770	0.817335	6.052428e-52	1.241827e-49
MsaG031022	MsaG035122	0.808505	5.103371e-50	8.406692e-48
MsaG031022	MsaG035300	0.803376	6.045008e-49	8.826054e-47
MsaG031022	MsaG036060	0.811735	1.035339e-50	1.844684e-48
MsaG031022	MsaG036211	0.815453	1.588395e-51	3.105958e-49
MsaG031022	MsaG036485	0.808359	5.482386e-50	8.999030e-48
MsaG031022	MsaG036511	0.872675	5.441861e-67	7.068883e-64
MsaG031022	MsaG036954	0.841691	7.565875e-58	3.115336e-55
MsaG031022	MsaG038022	0.811529	1.147441e-50	2.034105e-48
MsaG031022	MsaG039176	0.817201	6.483949e-52	1.325831e-49
MsaG031022	MsaG040366	0.823481	2.391719e-53	5.772512e-51
MsaG031022	MsaG040696	0.879557	2.381886e-69	4.212749e-66
MsaG031022	MsaG041003	0.825450	8.267647e-54	2.105642e-51
MsaG031022	MsaG041117	0.862237	1.156575e-63	9.796107e-61
MsaG031022	MsaG041288	0.846745	3.373462e-59	1.637998e-56
MsaG031022	MsaG042750	0.852450	8.778944e-61	5.180865e-58
MsaG031022	MsaG043344	0.800730	2.102598e-48	2.890148e-46
MsaG031022	MsaG043767	0.839997	2.093984e-57	8.173748e-55
MsaG031022	MsaG044025	0.802571	8.849900e-49	1.268439e-46
MsaG031022	MsaG044317	0.816767	8.108210e-52	1.639476e-49
MsaG031022	MsaG044707	0.843110	3.194081e-58	1.376396e-55
MsaG031022	MsaG045111	0.825468	8.188197e-54	2.086434e-51
MsaG031022	MsaG045261	0.843069	3.275117e-58	1.409448e-55
MsaG031022	MsaG045332	0.820031	1.488756e-52	3.277140e-50
MsaG031022	MsaG045582	0.859762	6.484925e-63	4.996512e-60
MsaG031022	MsaG045595	0.850379	3.360560e-60	1.845074e-57
MsaG031022	MsaG045766	0.821066	8.637455e-53	1.954082e-50
MsaG031022	MsaG045883	0.806346	1.457437e-49	2.280445e-47
MsaG031022	MsaG046223	0.851904	1.253206e-60	7.255874e-58
MsaG031022	MsaG046172	0.801875	1.228996e-48	1.733681e-46
MsaG031022	MsaG046181	0.855292	1.345816e-61	8.787053e-59
MsaG031022	MsaG046532	0.800835	2.002080e-48	2.758436e-46
MsaG031022	MsaG046491	0.851211	1.964477e-60	1.110106e-57
MsaG031022	MsaG046492	0.831741	2.537417e-55	7.722211e-53
MsaG031022	MsaG003008	0.802671	8.440399e-49	1.212516e-46
MsaG031022	MsaG005822	0.878911	4.022935e-69	6.905659e-66
MsaG031022	MsaG001553	0.817591	5.303081e-52	1.095258e-49
MsaG031022	MsaG001996	0.817962	4.375727e-52	9.124343e-50
MsaG031022	MsaG001632	0.811638	1.086811e-50	1.931763e-48
MsaG031022	MsaG002372	0.815483	1.564578e-51	3.061569e-49
MsaG031022	MsaG001709	0.816753	8.164303e-52	1.650253e-49
MsaG031022	MsaG001683	0.808502	5.112063e-50	8.420307e-48
MsaG031022	MsaG001614	0.840161	1.899060e-57	7.450799e-55
MsaG031022	MsaG008213	0.811813	9.961921e-51	1.778362e-48
MsaG031022	MsaG007899	0.851517	1.611959e-60	9.205896e-58
MsaG031022	MsaG013515	0.809330	3.406098e-50	5.723007e-48
MsaG031022	MsaG017032	0.801761	1.296479e-48	1.824130e-46
MsaG031022	MsaG014174	0.825955	6.284559e-54	1.623257e-51
MsaG031022	MsaG019334	0.841330	9.407826e-58	3.829580e-55
MsaG031022	MsaG020251	0.813917	3.464523e-51	6.517507e-49
MsaG031022	MsaG027071	0.828620	1.454387e-54	4.047168e-52
MsaG031022	MsaG027837	0.848825	9.078481e-60	4.726806e-57
MsaG031022	MsaG027119	0.817012	7.145661e-52	1.454043e-49
MsaG031022	MsaG032588	0.876839	2.114891e-68	3.301399e-65
MsaG031022	MsaG034393	0.822186	4.771591e-53	1.112081e-50
MsaG031022	MsaG032019	0.858535	1.506655e-62	1.108442e-59
MsaG031022	MsaG032681	0.871420	1.416184e-66	1.742973e-63
MsaG031022	MsaG031589	0.893653	1.149351e-74	4.114516e-71
MsaG031022	MsaG033169	0.822299	4.495201e-53	1.050856e-50
MsaG031022	MsaG031725	0.840812	1.285015e-57	5.145851e-55
MsaG031022	MsaG034413	0.807402	8.741126e-50	1.402218e-47
MsaG031022	MsaG034268	0.847386	2.256198e-59	1.119231e-56
MsaG031022	MsaG031297	0.834726	4.619563e-56	1.534815e-53
MsaG031022	MsaG031897	0.807644	7.770297e-50	1.253698e-47
MsaG031022	MsaG036262	0.803882	4.752716e-49	7.020833e-47
MsaG031022	MsaG040050	0.812271	7.921931e-51	1.430197e-48
MsaG031022	MsaG036566	0.826047	5.977543e-54	1.547929e-51
MsaG031022	MsaG041722	0.848603	1.045138e-59	5.400989e-57
MsaG031022	MsaG043789	0.811336	1.263465e-50	2.229205e-48
MsaG031022	MsaG043527	0.843804	2.088750e-58	9.203152e-56
MsaG031022	MsaG042308	0.895089	3.000730e-75	1.161072e-71
MsaG031022	MsaG044878	0.861158	2.462789e-63	2.001147e-60
MsaG031022	MsaG042389	0.864141	2.998951e-64	2.737864e-61
MsaG031022	MsaG041796	0.862889	7.301144e-64	6.344146e-61
MsaG031022	MsaG043311	0.843899	1.970805e-58	8.710012e-56
MsaG031022	MsaG043778	0.897182	4.089737e-76	1.779129e-72

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG031022	MtrunA17_Chr6g0455511	100.000	250	0	0	1	250	1	250	0.0	519
MsaG031022	MtrunA17_Chr7g0220111	87.698	252	26	4	1	250	1	249	3.51e-161	446
MsaG031022	MtrunA17_Chr3g0122251	65.759	257	68	6	1	249	1	245	2.10e-110	318
MsaG031022	MtrunA17_Chr5g0420091	63.470	219	75	2	1	218	1	215	2.30e-97	283
MsaG031022	MtrunA17_Chr4g0061671	66.667	174	57	1	1	174	1	173	3.14e-79	236
MsaG031022	MtrunA17_Chr8g0351051	50.000	256	117	7	1	250	1	251	2.28e-72	221
MsaG031022	MtrunA17_Chr4g0061691	60.355	169	66	1	1	168	1	169	7.75e-63	196
MsaG031022	MtrunA17_Chr8g0377551	55.729	192	67	7	63	249	1	179	1.26e-58	184
MsaG031022	MtrunA17_Chr8g0366231	45.374	227	114	3	1	226	1	218	8.84e-57	181
MsaG031022	MtrunA17_Chr6g0474371	50.838	179	86	1	1	177	1	179	2.36e-54	173
MsaG031022	MtrunA17_Chr7g0220121	40.234	256	142	5	1	250	1	251	2.65e-51	167
MsaG031022	MtrunA17_Chr1g0204111	49.133	173	85	2	1	171	17	188	1.50e-50	166
MsaG031022	MtrunA17_Chr5g0420081	49.425	174	87	1	1	173	1	174	4.13e-50	164
MsaG031022	MtrunA17_Chr4g0057151	50.000	168	82	2	1	167	1	167	3.39e-46	153
MsaG031022	MtrunA17_Chr3g0077501	46.667	180	84	4	1	174	1	174	1.06e-44	149
MsaG031022	MtrunA17_Chr8g0380021	46.629	178	85	4	1	173	17	189	5.82e-44	148
MsaG031022	MtrunA17_Chr3g0097101	41.071	224	118	5	1	220	16	229	6.34e-44	148
MsaG031022	MtrunA17_Chr8g0351031	42.995	207	107	5	1	202	1	201	1.08e-43	147
MsaG031022	MtrunA17_Chr2g0284911	44.828	174	94	2	1	173	16	188	3.25e-43	147
MsaG031022	MtrunA17_Chr7g0246431	48.521	169	85	2	1	168	1	168	7.81e-43	144
MsaG031022	MtrunA17_Chr2g0279821	41.489	188	109	1	1	188	1	187	1.52e-42	144
MsaG031022	MtrunA17_Chr8g0351041	46.667	165	79	4	1	160	1	161	4.15e-40	136
MsaG031022	MtrunA17_Chr5g0411691	35.398	226	131	3	1	213	1	224	4.63e-39	135
MsaG031022	MtrunA17_Chr4g0049541	37.850	214	122	3	1	205	1	212	7.68e-39	134
MsaG031022	MtrunA17_Chr8g0377561	98.361	61	1	0	1	61	1	61	9.03e-37	125
MsaG031022	MtrunA17_Chr4g0018421	43.195	169	94	2	1	167	1	169	2.95e-36	127
MsaG031022	MtrunA17_Chr4g0020221	46.067	178	90	3	1	174	1	176	1.91e-34	124
MsaG031022	MtrunA17_Chr1g0164791	41.954	174	94	4	1	168	1	173	2.23e-34	123
MsaG031022	MtrunA17_Chr5g0427401	36.364	220	125	6	1	216	1	209	5.09e-34	122
MsaG031022	MtrunA17_Chr7g0246381	83.824	68	11	0	1	68	1	68	1.68e-33	116
MsaG031022	MtrunA17_Chr3g0125241	45.205	146	75	2	1	145	26	167	1.89e-33	120
MsaG031022	MtrunA17_Chr5g0412271	43.407	182	96	4	1	179	1	178	2.36e-33	120
MsaG031022	MtrunA17_Chr2g0308251	69.333	75	23	0	1	75	1	75	2.64e-32	113
MsaG031022	MtrunA17_Chr5g0412461	43.529	170	90	3	1	167	1	167	1.28e-31	116
MsaG031022	MtrunA17_Chr1g0159661	38.547	179	91	4	1	173	1	166	9.86e-29	107
MsaG031022	MtrunA17_Chr5g0404951	36.190	210	116	6	1	202	1	200	1.14e-28	108
MsaG031022	MtrunA17_Chr3g0142191	41.139	158	87	3	1	157	1	153	1.41e-28	108
MsaG031022	MtrunA17_Chr4g0049901	39.247	186	104	5	1	181	27	208	3.27e-27	105
MsaG031022	MtrunA17_Chr1g0173161	69.565	69	21	0	1	69	1	69	3.50e-26	97.8
MsaG031022	MtrunA17_Chr5g0427921	63.333	60	22	0	1	60	1	60	1.27e-21	85.1
MsaG031022	MtrunA17_Chr4g0044071	64.912	57	20	0	1	57	1	57	7.72e-21	84.7
MsaG031022	MtrunA17_Chr3g0134451	58.571	70	29	0	1	70	1	70	7.98e-21	89.4
MsaG031022	MtrunA17_Chr5g0425191	66.667	57	19	0	1	57	1	57	1.66e-20	83.6
MsaG031022	MtrunA17_Chr2g0308271	32.000	200	113	6	54	250	27	206	3.59e-20	85.5
MsaG031022	MtrunA17_Chr2g0292791	52.174	69	32	1	2	70	9	76	1.89e-17	79.0
MsaG031022	MtrunA17_Chr1g0166611	75.556	45	11	0	16	60	20	64	2.17e-17	76.3
MsaG031022	MtrunA17_Chr1g0208561	49.275	69	34	1	2	70	9	76	6.43e-17	77.4
MsaG031022	MtrunA17_Chr1g0208581	49.275	69	34	1	2	70	9	76	6.50e-17	77.0
MsaG031022	MtrunA17_Chr3g0089141	49.275	69	34	1	2	70	9	76	7.34e-17	77.0
MsaG031022	MtrunA17_Chr2g0325971	47.826	69	35	1	2	70	9	76	1.46e-16	76.3
MsaG031022	MtrunA17_Chr3g0099421	52.174	69	32	1	2	70	34	101	1.68e-16	76.6
MsaG031022	MtrunA17_Chr8g0379021	42.708	96	50	3	2	96	12	103	5.57e-16	73.6
MsaG031022	MtrunA17_Chr3g0099411	49.275	69	34	1	2	70	9	76	5.86e-16	74.3
MsaG031022	MtrunA17_Chr5g0419601	51.429	70	33	1	1	70	8	76	6.96e-16	74.7
MsaG031022	MtrunA17_Chr8g0355091	49.275	69	34	1	2	70	9	76	7.54e-16	74.3
MsaG031022	MtrunA17_Chr1g0187361	49.275	69	34	1	2	70	9	76	7.85e-16	74.3
MsaG031022	MtrunA17_Chr1g0206701	49.275	69	34	1	2	70	9	76	8.95e-16	74.3
MsaG031022	MtrunA17_Chr1g0206721	49.275	69	34	1	2	70	9	76	9.32e-16	74.3
MsaG031022	MtrunA17_Chr1g0149391	50.725	69	33	1	2	70	9	76	2.33e-15	73.2
MsaG031022	MtrunA17_Chr2g0317451	50.725	69	33	1	2	70	9	76	3.12e-15	72.8
MsaG031022	MtrunA17_Chr1g0188671	49.275	69	34	1	2	70	47	114	3.42e-15	73.2
MsaG031022	MtrunA17_Chr2g0317481	50.725	69	33	1	2	70	9	76	3.52e-15	72.8
MsaG031022	MtrunA17_Chr2g0333981	48.611	72	36	1	1	72	11	81	9.77e-15	70.1
MsaG031022	MtrunA17_Chr1g0206991	46.377	69	36	1	2	70	9	76	1.13e-14	70.1
MsaG031022	MtrunA17_Chr8g0357771	49.206	63	31	1	1	63	1	62	1.54e-14	69.7
MsaG031022	MtrunA17_Chr8g0376821	52.632	57	27	0	1	57	1	57	1.96e-14	69.3
MsaG031022	MtrunA17_Chr5g0417661	47.143	70	30	1	1	70	56	118	2.35e-14	67.8
MsaG031022	MtrunA17_Chr5g0422941	49.275	69	34	1	2	70	9	76	2.68e-14	70.1
MsaG031022	MtrunA17_Chr5g0422421	49.275	69	34	1	2	70	9	76	3.77e-14	69.7
MsaG031022	MtrunA17_Chr1g0169761	52.632	57	27	0	1	57	1	57	6.26e-14	68.2
MsaG031022	MtrunA17_Chr4g0052061	32.168	143	85	5	1	139	1	135	9.62e-14	67.0
MsaG031022	MtrunA17_Chr1g0175611	50.877	57	28	0	1	57	1	57	1.24e-13	67.0
MsaG031022	MtrunA17_Chr2g0300441	46.479	71	35	2	2	70	7	76	2.29e-13	67.4
MsaG031022	MtrunA17_Chr1g0180591	49.123	57	29	0	1	57	1	57	2.92e-13	66.2
MsaG031022	MtrunA17_Chr3g0119901	42.857	70	39	1	1	70	8	76	3.04e-13	66.6
MsaG031022	MtrunA17_Chr4g0074101	49.123	57	29	0	1	57	1	57	3.62e-13	66.2
MsaG031022	MtrunA17_Chr3g0089151	43.478	69	38	1	2	70	9	76	3.97e-13	64.7
MsaG031022	MtrunA17_Chr1g0175601	50.877	57	28	0	1	57	1	57	4.73e-13	65.5
MsaG031022	MtrunA17_Chr3g0085241	42.857	70	39	1	1	70	40	108	8.12e-13	66.2
MsaG031022	MtrunA17_Chr2g0300421	50.000	56	28	0	2	57	9	64	1.40e-12	64.3
MsaG031022	MtrunA17_Chr4g0018951	46.835	79	35	2	16	94	26	97	1.45e-12	63.9
MsaG031022	MtrunA17_Chr4g0052081	41.429	70	40	1	1	70	1	69	1.51e-12	64.3
MsaG031022	MtrunA17_Chr4g0060841	50.943	53	26	0	1	53	1	53	1.57e-12	66.2
MsaG031022	MtrunA17_Chr7g0246401	34.307	137	73	5	122	250	2	129	1.46e-11	60.5
MsaG031022	MtrunA17_Chr8g0356071	45.614	57	31	0	1	57	1	57	1.75e-11	60.8
MsaG031022	MtrunA17_Chr1g0206691	48.333	60	30	1	11	70	1	59	2.99e-11	61.2
MsaG031022	MtrunA17_Chr1g0187351	48.333	60	30	1	11	70	1	59	5.40e-11	57.4
MsaG031022	MtrunA17_Chr3g0111841	51.786	56	26	1	8	63	2	56	7.87e-11	56.6
MsaG031022	MtrunA17_Chr5g0427961	31.818	110	75	0	62	171	5	114	8.75e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG031022	AT3G02310.1	73.228	254	60	4	1	250	1	250	1.62e-133	377
MsaG031022	AT5G15800.1	74.609	256	54	5	1	250	1	251	1.80e-125	356
MsaG031022	AT5G15800.2	73.004	263	57	5	1	250	1	262	2.29e-125	357
MsaG031022	AT3G02310.2	82.486	177	30	1	1	176	1	177	3.41e-102	295
MsaG031022	AT1G24260.1	62.257	257	75	4	1	249	1	243	3.37e-101	295
MsaG031022	AT1G24260.2	62.016	258	75	4	1	249	1	244	5.33e-101	294
MsaG031022	AT1G24260.3	61.265	253	71	3	1	249	1	230	1.19e-94	278
MsaG031022	AT2G03710.1	54.406	261	105	3	1	250	1	258	1.05e-93	276
MsaG031022	AT2G03710.2	54.406	261	104	4	1	250	1	257	5.92e-92	271
MsaG031022	AT2G03710.3	68.023	172	54	1	1	171	1	172	5.43e-81	241
MsaG031022	AT2G45650.1	49.027	257	119	7	1	250	1	252	5.59e-72	221
MsaG031022	AT1G69120.2	52.299	174	82	1	1	173	1	174	3.94e-58	185
MsaG031022	AT1G69120.1	52.299	174	82	1	1	173	1	174	2.61e-57	183
MsaG031022	AT5G60910.1	42.231	251	128	5	1	250	1	235	6.91e-57	182
MsaG031022	AT1G26310.1	53.409	176	79	1	1	173	1	176	9.83e-57	182
MsaG031022	AT3G61120.1	44.643	224	95	3	1	224	1	195	1.02e-53	174
MsaG031022	AT4G09960.6	44.886	176	93	3	1	174	2	175	8.92e-47	155
MsaG031022	AT4G09960.1	44.886	176	93	3	1	174	1	174	9.87e-47	155
MsaG031022	AT4G09960.5	44.886	176	93	3	1	174	11	184	1.43e-46	155
MsaG031022	AT4G09960.3	44.886	176	93	3	1	174	27	200	3.98e-46	155
MsaG031022	AT3G30260.1	51.299	154	70	2	1	151	1	152	1.92e-45	152
MsaG031022	AT2G45660.1	48.837	172	84	3	1	170	1	170	2.75e-45	151
MsaG031022	AT3G58780.5	47.159	176	87	4	1	173	22	194	9.69e-45	151
MsaG031022	AT3G58780.1	47.159	176	87	4	1	173	16	188	9.89e-45	151
MsaG031022	AT2G42830.1	47.727	176	86	4	1	173	16	188	3.33e-44	149
MsaG031022	AT4G09960.4	42.781	187	91	5	1	185	96	268	5.80e-44	151
MsaG031022	AT4G18960.1	46.409	181	90	4	2	180	18	193	1.22e-43	148
MsaG031022	AT4G11880.2	51.282	156	76	0	1	156	1	156	2.09e-43	145
MsaG031022	AT4G11880.3	51.282	156	76	0	1	156	1	156	2.09e-43	145
MsaG031022	AT4G09960.2	49.306	144	69	3	1	142	1	142	2.13e-43	146
MsaG031022	AT2G45660.2	49.367	158	76	3	1	156	1	156	4.04e-43	144
MsaG031022	AT4G22950.2	47.093	172	90	1	1	172	1	171	4.64e-43	144
MsaG031022	AT4G37940.1	36.596	235	137	5	1	230	1	228	7.13e-43	145
MsaG031022	AT2G42830.2	49.057	159	75	4	1	156	16	171	1.29e-42	145
MsaG031022	AT3G58780.2	46.023	176	82	4	1	173	16	181	1.90e-42	145
MsaG031022	AT4G22950.3	47.647	170	88	1	1	170	1	169	2.67e-42	144
MsaG031022	AT4G22950.1	47.647	170	88	1	1	170	1	169	2.67e-42	144
MsaG031022	AT4G11880.4	50.000	172	86	0	1	172	1	172	3.94e-42	143
MsaG031022	AT4G11880.1	50.000	172	86	0	1	172	1	172	3.94e-42	143
MsaG031022	AT3G58780.4	51.333	150	67	4	1	147	16	162	4.03e-41	142
MsaG031022	AT3G58780.3	42.000	200	87	4	1	173	16	213	5.17e-41	142
MsaG031022	AT5G62165.3	46.199	171	90	2	1	170	1	170	8.41e-41	139
MsaG031022	AT5G62165.1	46.199	171	90	2	1	170	1	170	8.41e-41	139
MsaG031022	AT5G62165.2	46.199	171	90	2	1	170	1	170	8.41e-41	139
MsaG031022	AT3G57230.1	43.275	171	96	1	1	171	1	170	1.18e-40	140
MsaG031022	AT3G57230.4	43.275	171	96	1	1	171	1	170	1.18e-40	140
MsaG031022	AT2G22630.1	38.500	200	113	2	1	200	1	190	4.22e-39	135
MsaG031022	AT2G22630.2	38.500	200	113	2	1	200	1	190	4.22e-39	135
MsaG031022	AT3G57230.2	48.252	143	73	1	1	143	1	142	1.04e-38	132
MsaG031022	AT5G62165.17	46.497	157	82	2	1	156	1	156	1.48e-38	132
MsaG031022	AT5G62165.12	46.497	157	82	2	1	156	1	156	1.48e-38	132
MsaG031022	AT5G62165.11	46.497	157	82	2	1	156	1	156	1.48e-38	132
MsaG031022	AT4G37940.4	40.625	192	112	2	1	192	1	190	2.33e-38	133
MsaG031022	AT2G14210.2	39.899	198	114	1	1	193	1	198	5.45e-38	133
MsaG031022	AT2G14210.1	39.899	198	114	1	1	193	1	198	5.48e-38	133
MsaG031022	AT5G51870.1	42.458	179	97	3	1	177	1	175	1.68e-37	131
MsaG031022	AT5G62165.6	46.259	147	77	2	1	146	1	146	1.24e-36	127
MsaG031022	AT5G62165.9	46.259	147	77	2	1	146	1	146	1.24e-36	127
MsaG031022	AT5G62165.7	46.259	147	77	2	1	146	1	146	1.24e-36	127
MsaG031022	AT5G62165.8	46.259	147	77	2	1	146	1	146	1.24e-36	127
MsaG031022	AT5G62165.13	46.259	147	77	2	1	146	1	146	1.24e-36	127
MsaG031022	AT5G62165.10	45.223	157	84	2	1	156	1	156	1.85e-36	128
MsaG031022	AT5G62165.4	45.223	157	84	2	1	156	1	156	1.85e-36	128
MsaG031022	AT4G37940.3	46.479	142	75	1	1	142	1	141	2.13e-36	127
MsaG031022	AT5G51870.4	42.938	177	95	3	1	175	1	173	9.64e-36	127
MsaG031022	AT5G51870.3	42.938	177	95	3	1	175	11	183	1.29e-35	127
MsaG031022	AT5G13790.2	40.807	223	121	6	1	218	1	217	2.82e-35	127
MsaG031022	AT5G13790.1	40.359	223	119	5	1	218	1	214	5.82e-35	126
MsaG031022	AT3G57390.3	43.333	180	93	2	1	172	1	179	5.90e-35	125
MsaG031022	AT5G51860.2	40.571	175	101	2	1	173	1	174	7.26e-35	124
MsaG031022	AT3G57390.1	43.333	180	93	2	1	172	1	179	1.01e-34	125
MsaG031022	AT2G22540.3	40.476	168	98	2	1	167	1	167	2.07e-34	124
MsaG031022	AT2G22540.1	40.476	168	98	2	1	167	1	167	2.07e-34	124
MsaG031022	AT5G51860.1	40.698	172	99	2	1	170	1	171	2.36e-34	123
MsaG031022	AT5G23260.2	37.264	212	120	4	1	211	1	200	5.73e-34	123
MsaG031022	AT5G20240.1	41.111	180	85	5	1	173	1	166	7.71e-34	121
MsaG031022	AT5G23260.4	37.264	212	120	4	1	211	17	216	9.19e-34	123
MsaG031022	AT1G71692.1	40.107	187	96	2	1	175	1	183	9.89e-34	121
MsaG031022	AT5G65050.2	41.071	168	92	2	1	168	1	161	1.53e-33	120
MsaG031022	AT5G10140.4	40.230	174	89	3	1	168	1	165	3.36e-33	119
MsaG031022	AT5G51870.2	44.521	146	78	2	1	144	1	145	3.79e-33	119
MsaG031022	AT5G65050.3	41.071	168	92	2	1	168	1	161	4.05e-33	119
MsaG031022	AT5G51870.5	44.521	146	78	2	1	144	24	168	1.36e-32	118
MsaG031022	AT5G65060.3	39.881	168	94	3	1	168	1	161	2.42e-32	117
MsaG031022	AT5G65050.5	39.881	168	83	2	1	168	1	150	4.05e-32	116
MsaG031022	AT5G65060.1	39.881	168	94	3	1	168	1	161	4.34e-32	117
MsaG031022	AT5G10140.1	42.953	149	74	2	1	147	1	140	4.98e-32	116
MsaG031022	AT5G10140.2	42.953	149	74	2	1	147	1	140	5.01e-32	115
MsaG031022	AT5G20240.2	46.575	146	61	4	1	139	1	136	7.24e-32	114
MsaG031022	AT5G10140.3	42.953	149	74	2	1	147	1	140	8.41e-32	115
MsaG031022	AT5G65050.1	39.535	172	93	3	1	168	1	165	1.89e-31	114
MsaG031022	AT4G24540.1	42.135	178	95	3	1	174	1	174	2.88e-31	115
MsaG031022	AT5G23260.1	36.792	212	116	5	1	211	17	211	9.70e-31	115
MsaG031022	AT5G65070.1	42.197	173	89	3	1	171	1	164	1.04e-30	113
MsaG031022	AT5G65060.2	38.690	168	85	3	1	168	1	150	1.14e-30	112
MsaG031022	AT5G62165.14	70.833	72	20	1	1	72	1	71	5.91e-30	108
MsaG031022	AT5G65080.3	41.401	157	83	3	1	156	8	156	1.65e-29	110
MsaG031022	AT5G23260.3	41.497	147	83	2	1	146	1	145	5.68e-29	110
MsaG031022	AT2G22540.2	36.905	168	99	2	1	167	1	162	1.05e-28	109
MsaG031022	AT5G65070.2	37.374	198	94	4	1	171	1	195	1.36e-27	106
MsaG031022	AT3G54340.1	37.572	173	103	2	1	172	1	169	3.36e-27	105
MsaG031022	AT1G31140.2	42.308	156	73	3	1	146	1	149	4.09e-26	101
MsaG031022	AT1G31140.1	40.816	147	86	1	1	146	1	147	6.01e-26	101
MsaG031022	AT5G65080.2	34.722	216	122	4	1	216	8	204	8.78e-26	100
MsaG031022	AT1G77080.5	38.728	173	99	2	1	173	1	166	1.96e-25	99.0
MsaG031022	AT1G77080.11	37.640	178	104	2	1	178	1	171	3.43e-25	98.2
MsaG031022	AT5G65070.4	42.282	149	75	3	1	147	1	140	3.67e-25	97.4
MsaG031022	AT1G77080.4	38.012	171	99	2	1	171	1	164	9.12e-25	97.8
MsaG031022	AT5G65070.5	36.612	183	86	4	1	156	1	180	3.50e-24	96.7
MsaG031022	AT5G65070.3	33.824	204	94	4	1	171	1	196	1.71e-23	95.5
MsaG031022	AT1G77080.8	33.333	195	102	3	1	171	1	191	7.06e-22	90.9
MsaG031022	AT1G22130.1	48.889	90	37	1	1	90	1	81	1.43e-20	89.4
MsaG031022	AT1G77080.2	36.842	171	97	3	1	171	1	160	1.53e-20	86.7
MsaG031022	AT1G77980.1	54.054	74	34	0	1	74	1	74	5.75e-20	87.8
MsaG031022	AT1G69120.3	40.179	112	66	1	63	173	1	112	1.27e-19	84.0
MsaG031022	AT5G60910.2	31.217	189	113	4	63	250	1	173	3.84e-18	79.7
MsaG031022	AT1G77080.12	37.179	156	87	3	1	156	1	145	5.86e-18	78.6
MsaG031022	AT1G77950.3	45.556	90	40	1	1	90	1	81	2.20e-17	79.3
MsaG031022	AT1G77950.2	45.556	90	40	1	1	90	1	81	2.20e-17	79.3
MsaG031022	AT1G77950.1	45.556	90	40	1	1	90	1	81	2.20e-17	79.3
MsaG031022	AT1G77950.4	45.556	90	40	1	1	90	1	81	2.20e-17	79.3
MsaG031022	AT1G65360.1	35.593	118	61	3	1	109	6	117	1.94e-16	76.3
MsaG031022	AT1G01530.1	35.484	155	88	4	1	154	6	149	1.99e-16	76.6
MsaG031022	AT4G37435.1	59.649	57	23	0	1	57	1	57	2.64e-16	75.1
MsaG031022	AT4G36590.1	41.379	87	50	1	2	88	7	92	1.28e-14	71.6
MsaG031022	AT2G03060.3	36.190	105	58	2	1	104	1	97	1.54e-14	72.8
MsaG031022	AT2G03060.7	36.190	105	58	2	1	104	1	97	1.54e-14	72.8
MsaG031022	AT2G03060.1	36.190	105	58	2	1	104	1	97	1.54e-14	72.8
MsaG031022	AT2G03060.2	36.190	105	58	2	1	104	1	97	2.00e-14	72.4
MsaG031022	AT5G60440.1	34.286	140	71	4	2	139	7	127	2.09e-14	71.6
MsaG031022	AT1G18750.4	52.632	57	27	0	1	57	1	57	3.49e-14	71.6
MsaG031022	AT1G18750.1	52.632	57	27	0	1	57	1	57	3.71e-14	71.6
MsaG031022	AT1G18750.3	52.632	57	27	0	1	57	1	57	4.46e-14	71.6
MsaG031022	AT3G04100.1	45.205	73	39	1	2	74	14	85	4.70e-14	69.3
MsaG031022	AT2G24840.1	47.143	70	36	1	1	70	62	130	4.89e-14	70.1
MsaG031022	AT1G72350.1	47.826	69	33	1	2	70	43	108	3.89e-13	67.0
MsaG031022	AT1G69540.1	29.703	202	113	7	1	173	1	202	5.23e-13	68.2
MsaG031022	AT1G69540.2	27.228	202	118	4	1	173	1	202	6.33e-13	67.8
MsaG031022	AT2G34440.1	38.889	72	43	1	1	72	1	71	1.26e-12	64.7
MsaG031022	AT3G66656.1	40.845	71	41	1	1	71	1	70	2.17e-12	64.3
MsaG031022	AT1G29962.1	46.377	69	36	1	2	70	8	75	7.85e-12	62.8
MsaG031022	AT4G37940.2	26.590	173	116	4	63	230	1	167	1.40e-11	61.6
MsaG031022	AT1G47760.1	35.714	112	62	3	1	111	1	103	1.72e-11	62.0
MsaG031022	AT1G28460.1	44.928	69	37	1	2	70	8	75	4.03e-11	60.8

Find 48 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCCCATGTTTGCCTATAC+TGG	0.207949	6:+18353183	None:intergenic
CTTAATTGCAGAAACCTTCT+TGG	0.232016	6:-18354342	MsaT031022.1:intron
CTCATAAAGCTTGCCTCTAT+TGG	0.248430	6:+18356645	None:intergenic
ACTCAAGCTCAACAAGTTAA+TGG	0.276163	6:-18352509	MsaT031022.1:CDS
CTGCACCATAGCTGCACTTT+TGG	0.300781	6:+18354874	None:intergenic
CTTGATACAGGACTGATTAC+AGG	0.316120	6:-18352571	MsaT031022.1:intron
ACAAAGCTTCTTTCAGCCTT+TGG	0.321218	6:-18353117	MsaT031022.1:CDS
ATTAGCTGATCTTCAAAATA+AGG	0.323444	6:-18353635	MsaT031022.1:intron
CAAGTTAATGGATTTATTCC+TGG	0.326103	6:-18352497	MsaT031022.1:CDS
TTCAAGCTGCTCAAGATCTT+TGG	0.326567	6:+18354296	None:intergenic
TTTATATACCTCAAGCTCTT+TGG	0.339567	6:+18354833	None:intergenic
GGTGAAGACTTAGGTCCATT+AGG	0.390262	6:-18354321	MsaT031022.1:CDS
CTTATTATCTTCTCCAATAG+AGG	0.396704	6:-18356658	MsaT031022.1:CDS
ATTCATCTCTCAAGCAAGTC+AGG	0.421259	6:-18354263	MsaT031022.1:CDS
ACATTTGCAAAGAGAAGAAA+TGG	0.424187	6:-18356733	MsaT031022.1:CDS
GGAAGCTGGTGATCAAAGTA+TGG	0.434521	6:-18353165	MsaT031022.1:CDS
TCAAGATCTTTGGTACCTAA+TGG	0.441434	6:+18354306	None:intergenic
ATTTACCCTATCTGCAATGT+TGG	0.448140	6:+18353086	None:intergenic
GCATGCTCAAAACACTTGAT+AGG	0.454651	6:-18354899	MsaT031022.1:CDS
AAACAGATCTTTGTCTATGA+AGG	0.464986	6:-18353514	MsaT031022.1:intron
TGCAATCCAACATTGCAGAT+AGG	0.474506	6:-18353092	MsaT031022.1:CDS
GTTAGCTGATCTGATGCTAC+TGG	0.476275	6:+18352539	None:intergenic
GAGGAAGAGTGGAATTGAAA+AGG	0.478417	6:-18356783	MsaT031022.1:CDS
TATACCTCAAGCTCTTTGGC+AGG	0.482984	6:+18354837	None:intergenic
GCAATCCAACATTGCAGATA+GGG	0.488188	6:-18353091	MsaT031022.1:intron
TCAATTCAAGAAACCAGTAT+AGG	0.489033	6:-18353196	MsaT031022.1:CDS
AACCTTCTTGGTGAAGACTT+AGG	0.497236	6:-18354330	MsaT031022.1:CDS
ACTAAATTTGAATACCTTGG+TGG	0.499386	6:+18354239	None:intergenic
TATAGGCAAACATGGGAAGC+TGG	0.508553	6:-18353179	MsaT031022.1:CDS
CAAGATTTGAATCTCTTCAA+AGG	0.513932	6:-18354464	MsaT031022.1:CDS
AGGTACCAAAAGTGCAGCTA+TGG	0.519687	6:-18354879	MsaT031022.1:CDS
GGTGATCAAAGTATGGCATA+TGG	0.522384	6:-18353158	MsaT031022.1:CDS
GAAAATGGGAAGAGGAAGAG+TGG	0.539131	6:-18356794	None:intergenic
TTAATGGATTTATTCCTGGA+TGG	0.541666	6:-18352493	MsaT031022.1:CDS
GAAACCAGTATAGGCAAACA+TGG	0.541844	6:-18353187	MsaT031022.1:CDS
AATCTCTTCAAAGGACTCAA+AGG	0.546223	6:-18354455	MsaT031022.1:intron
GACCTAAGTCTTCACCAAGA+AGG	0.551505	6:+18354328	None:intergenic
TTTGCAGACTCAATTCATGC+TGG	0.554411	6:-18353662	MsaT031022.1:intron
TTGAAGTTGAAAATGGGAAG+AGG	0.556816	6:-18356802	None:intergenic
CTTTCAGCTTCAAGTACTCA+CGG	0.561889	6:+18354487	None:intergenic
TTAGCTCAAAGCATCCATCC+AGG	0.582969	6:+18352479	None:intergenic
GCTTGAGAGATGAATCAAGT+TGG	0.598020	6:+18354271	None:intergenic
CAAACCTGCCAAAGAGCTTG+AGG	0.604710	6:-18354841	MsaT031022.1:intron
AATGTTGGATTGCACTCCAA+AGG	0.620049	6:+18353101	None:intergenic
AGCTGATCTGATGCTACTGG+AGG	0.648548	6:+18352542	None:intergenic
GTGTACGTAGGAGCATATGT+TGG	0.662892	6:-18353544	MsaT031022.1:intron
AAACCAGTATAGGCAAACAT+GGG	0.672240	6:-18353186	MsaT031022.1:CDS
CAAGCAAGTCAGGTCCACCA+AGG	0.698134	6:-18354253	MsaT031022.1:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	18352484	18356812	18352484	ID=MsaG031022
Chr6	mRNA	18352484	18356812	18352484	ID=MsaT031022.1;Parent=MsaG031022
Chr6	exon	18352484	18352583	18352484	ID=MsaT031022.1.exon8;Parent=MsaT031022.1
Chr6	CDS	18352484	18352583	18352484	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18353092	18353234	18353092	ID=MsaT031022.1.exon7;Parent=MsaT031022.1
Chr6	CDS	18353092	18353234	18353092	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18353515	18353556	18353515	ID=MsaT031022.1.exon6;Parent=MsaT031022.1
Chr6	CDS	18353515	18353556	18353515	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18353636	18353677	18353636	ID=MsaT031022.1.exon5;Parent=MsaT031022.1
Chr6	CDS	18353636	18353677	18353636	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18354254	18354353	18354254	ID=MsaT031022.1.exon4;Parent=MsaT031022.1
Chr6	CDS	18354254	18354353	18354254	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18354456	18354517	18354456	ID=MsaT031022.1.exon3;Parent=MsaT031022.1
Chr6	CDS	18354456	18354517	18354456	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18354842	18354920	18354842	ID=MsaT031022.1.exon2;Parent=MsaT031022.1
Chr6	CDS	18354842	18354920	18354842	ID=cds.MsaT031022.1;Parent=MsaT031022.1
Chr6	exon	18356628	18356812	18356628	ID=MsaT031022.1.exon1;Parent=MsaT031022.1
Chr6	CDS	18356628	18356812	18356628	ID=cds.MsaT031022.1;Parent=MsaT031022.1

Gene Sequence

>MsaT031022.1

ATGGGAAGAGGAAGAGTGGAATTGAAAAGGATAGAGAATAAGATAAACAGACAAGTAACATTTGCAAAGAGAAGAAATGGACTTCTTAAGAAAGCTTACGAATTATCTGTTCTTTGTGATGCTGAAGTTGCTCTTATTATCTTCTCCAATAGAGGCAAGCTTTATGAGTTTTGTAGCAGTCCTAGCATGCTCAAAACACTTGATAGGTACCAAAAGTGCAGCTATGGTGCAGTAGAAGTTAACAAACCTGCCAAAGAGCTTGAGAGCAGTTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACTCAAAGAAACCTTCTTGGTGAAGACTTAGGTCCATTAGGTACCAAAGATCTTGAGCAGCTTGAACGCCAACTTGATTCATCTCTCAAGCAAGTCAGGTCCACCAAGACTCAATTCATGCTGGACCAATTAGCTGATCTTCAAAATAAGGAGCATATGTTGGTAGAAGCAAACAGATCTTTGTCTATGAAGCTGGAAGAGATCAATATCAATTCAAGAAACCAGTATAGGCAAACATGGGAAGCTGGTGATCAAAGTATGGCATATGGTAATCAAAATGCTCACTCACAAAGCTTCTTTCAGCCTTTGGAGTGCAATCCAACATTGCAGATAGGGACTGATTACAGGTACAGTCCTCCAGTAGCATCAGATCAGCTAACTGCAACAACTCAAGCTCAACAAGTTAATGGATTTATTCCTGGATGGATGCTTTGA

Protein sequence

>MsaT031022.1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSPSMLKTLDRYQKCSYGAVEVNKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLGTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSMKLEEININSRNQYRQTWEAGDQSMAYGNQNAHSQSFFQPLECNPTLQIGTDYRYSPPVASDQLTATTQAQQVNGFIPGWML*