AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG031235

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031235 MtrunA17_Chr6g0453471 96.936 359 7 3 1 357 1 357 0.0 703
MsaG031235 MtrunA17_Chr7g0217741 60.322 373 68 10 1 357 1 309 3.85e-135 387
MsaG031235 MtrunA17_Chr4g0042671 47.573 412 141 8 1 350 1 399 1.10e-105 316
MsaG031235 MtrunA17_Chr3g0115821 77.444 133 30 0 1 133 1 133 3.71e-78 243
MsaG031235 MtrunA17_Chr8g0349261 65.714 175 52 4 1 171 1 171 9.19e-77 238
MsaG031235 MtrunA17_Chr4g0039971 56.500 200 83 2 1 199 2 198 1.44e-74 234
MsaG031235 MtrunA17_Chr2g0281071 76.154 130 30 1 1 129 1 130 3.47e-74 233
MsaG031235 MtrunA17_Chr4g0048511 73.188 138 36 1 1 137 1 138 4.46e-74 233
MsaG031235 MtrunA17_Chr2g0323411 72.263 137 38 0 1 137 1 137 5.27e-72 227
MsaG031235 MtrunA17_Chr5g0410961 71.756 131 37 0 1 131 1 131 8.38e-70 222
MsaG031235 MtrunA17_Chr5g0395281 51.643 213 82 3 1 213 1 192 4.07e-69 219
MsaG031235 MtrunA17_Chr1g0203411 61.988 171 57 3 1 171 1 163 8.07e-69 218
MsaG031235 MtrunA17_Chr5g0417821 61.935 155 52 1 10 164 5 152 6.04e-67 213
MsaG031235 MtrunA17_Chr5g0434571 55.330 197 78 3 1 194 37 226 4.39e-66 213
MsaG031235 MtrunA17_Chr3g0110351 68.613 137 43 0 1 137 1 137 5.35e-66 211
MsaG031235 MtrunA17_Chr4g0057031 69.231 130 40 0 1 130 1 130 6.05e-65 207
MsaG031235 MtrunA17_Chr4g0037141 55.215 163 66 1 1 163 1 156 9.05e-63 202
MsaG031235 MtrunA17_Chr6g0452271 54.438 169 72 1 1 164 1 169 1.85e-62 202
MsaG031235 MtrunA17_Chr7g0217221 50.732 205 87 5 1 205 1 191 4.56e-62 199
MsaG031235 MtrunA17_Chr3g0103281 59.211 152 62 0 1 152 1 152 5.96e-62 201
MsaG031235 MtrunA17_Chr1g0193371 68.182 132 42 0 1 132 1 132 1.42e-61 201
MsaG031235 MtrunA17_Chr1g0193801 67.969 128 41 0 1 128 1 128 4.03e-61 201
MsaG031235 MtrunA17_Chr7g0228891 67.969 128 41 0 1 128 1 128 5.40e-61 197
MsaG031235 MtrunA17_Chr3g0131121 58.278 151 63 0 1 151 1 151 1.05e-60 197
MsaG031235 MtrunA17_Chr7g0270891 67.188 128 42 0 1 128 1 128 6.73e-60 197
MsaG031235 MtrunA17_Chr4g0058631 53.107 177 79 1 1 177 1 173 9.29e-60 196
MsaG031235 MtrunA17_Chr7g0254411 68.000 125 38 1 1 123 1 125 1.17e-59 195
MsaG031235 MtrunA17_Chr4g0060721 51.479 169 68 2 1 169 2 156 2.33e-59 194
MsaG031235 MtrunA17_Chr3g0092401 68.067 119 38 0 1 119 2 120 4.45e-59 193
MsaG031235 MtrunA17_Chr7g0274581 65.254 118 41 0 1 118 1 118 8.29e-59 189
MsaG031235 MtrunA17_Chr1g0187761 70.690 116 34 0 1 116 1 116 8.38e-59 191
MsaG031235 MtrunA17_Chr1g0167661 73.276 116 31 0 1 116 1 116 2.59e-58 189
MsaG031235 MtrunA17_Chr3g0121241 66.935 124 41 0 5 128 35 158 4.21e-58 190
MsaG031235 MtrunA17_Chr8g0385321 63.281 128 47 0 1 128 1 128 4.77e-58 191
MsaG031235 MtrunA17_Chr5g0435101 64.800 125 44 0 3 127 2 126 6.51e-58 187
MsaG031235 MtrunA17_Chr1g0167691 71.552 116 33 0 1 116 1 116 6.71e-58 188
MsaG031235 MtrunA17_Chr7g0271241 69.531 128 39 0 1 128 1 128 1.66e-57 191
MsaG031235 MtrunA17_Chr4g0042611 90.909 88 8 0 1 88 1 88 2.56e-57 181
MsaG031235 MtrunA17_Chr4g0068061 68.966 116 36 0 1 116 1 116 4.23e-57 189
MsaG031235 MtrunA17_Chr7g0261281 68.644 118 37 0 1 118 1 118 6.88e-57 186
MsaG031235 MtrunA17_Chr2g0309911 62.121 132 45 1 6 137 5 131 1.93e-56 186
MsaG031235 MtrunA17_Chr3g0117091 65.625 128 44 0 1 128 1 128 2.09e-56 187
MsaG031235 MtrunA17_Chr1g0211161 55.280 161 70 1 3 161 4 164 7.60e-56 182
MsaG031235 MtrunA17_Chr7g0247131 69.048 126 37 1 44 169 10 133 9.19e-56 183
MsaG031235 MtrunA17_Chr6g0453211 70.270 111 33 0 1 111 1 111 1.91e-55 184
MsaG031235 MtrunA17_Chr2g0311221 67.273 110 36 0 2 111 4 113 2.39e-55 184
MsaG031235 MtrunA17_Chr8g0346561 66.949 118 39 0 1 118 1 118 2.77e-55 183
MsaG031235 MtrunA17_Chr7g0275911 67.241 116 38 0 1 116 1 116 3.31e-55 181
MsaG031235 MtrunA17_Chr7g0264641 57.823 147 60 2 1 146 1 146 7.50e-54 178
MsaG031235 MtrunA17_Chr2g0323351 66.949 118 39 0 1 118 1 118 1.26e-53 177
MsaG031235 MtrunA17_Chr1g0194951 62.016 129 49 0 1 129 1 129 1.82e-53 180
MsaG031235 MtrunA17_Chr8g0387421 61.864 118 45 0 1 118 1 118 1.31e-52 176
MsaG031235 MtrunA17_Chr4g0070611 47.449 196 93 2 1 196 1 186 1.99e-52 176
MsaG031235 MtrunA17_Chr4g0028311 60.769 130 50 1 1 129 1 130 3.09e-52 176
MsaG031235 MtrunA17_Chr2g0330041 55.000 140 56 1 1 133 1 140 9.47e-52 176
MsaG031235 MtrunA17_Chr8g0342521 60.163 123 49 0 1 123 1 123 1.05e-51 175
MsaG031235 MtrunA17_Chr4g0070641 66.387 119 40 0 1 119 1 119 1.87e-51 169
MsaG031235 MtrunA17_Chr8g0342541 59.350 123 50 0 1 123 1 123 3.79e-51 174
MsaG031235 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 5.88e-51 173
MsaG031235 MtrunA17_Chr1g0151941 55.797 138 59 2 1 137 1 137 7.96e-51 170
MsaG031235 MtrunA17_Chr5g0400821 64.957 117 40 1 1 116 1 117 9.40e-51 171
MsaG031235 MtrunA17_Chr3g0135311 53.333 150 69 1 1 149 1 150 2.39e-50 171
MsaG031235 MtrunA17_Chr4g0044421 62.400 125 46 1 3 126 2 126 2.63e-50 166
MsaG031235 MtrunA17_Chr5g0397231 63.636 110 40 0 1 110 1 110 6.02e-50 170
MsaG031235 MtrunA17_Chr2g0327351 58.108 148 59 2 1 147 1 146 6.72e-50 169
MsaG031235 MtrunA17_Chr4g0022931 63.248 117 42 1 1 116 1 117 1.55e-49 167
MsaG031235 MtrunA17_Chr4g0022911 61.207 116 44 1 1 115 1 116 1.45e-48 165
MsaG031235 MtrunA17_Chr1g0203441 64.706 119 41 1 1 118 1 119 1.48e-48 164
MsaG031235 MtrunA17_Chr4g0022901 62.931 116 42 1 1 115 1 116 1.54e-48 164
MsaG031235 MtrunA17_Chr7g0269831 66.379 116 39 0 1 116 1 116 2.20e-48 166
MsaG031235 MtrunA17_Chr4g0022881 53.472 144 63 2 1 141 1 143 2.31e-47 160
MsaG031235 MtrunA17_Chr4g0032401 63.964 111 40 0 12 122 17 127 3.86e-47 162
MsaG031235 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 5.86e-47 161
MsaG031235 MtrunA17_Chr8g0342481 58.475 118 48 1 1 117 1 118 6.62e-46 161
MsaG031235 MtrunA17_Chr2g0328771 62.963 108 40 0 12 119 20 127 7.27e-46 159
MsaG031235 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 8.87e-46 159
MsaG031235 MtrunA17_Chr3g0088461 64.815 108 38 0 9 116 19 126 6.25e-45 157
MsaG031235 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 2.70e-43 150
MsaG031235 MtrunA17_Chr6g0470971 60.909 110 43 0 9 118 11 120 1.93e-42 149
MsaG031235 MtrunA17_Chr6g0487491 54.762 126 48 2 1 117 1 126 2.43e-42 148
MsaG031235 MtrunA17_Chr1g0209661 57.658 111 47 0 12 122 27 137 2.77e-41 147
MsaG031235 MtrunA17_Chr1g0194291 54.762 126 56 1 8 133 17 141 4.59e-41 145
MsaG031235 MtrunA17_Chr2g0294811 67.391 92 30 0 1 92 1 92 8.51e-41 139
MsaG031235 MtrunA17_Chr1g0186061 61.165 103 40 0 13 115 21 123 9.24e-41 144
MsaG031235 MtrunA17_Chr3g0080861 58.036 112 46 1 10 121 35 145 1.74e-40 149
MsaG031235 MtrunA17_Chr4g0055981 58.120 117 49 0 9 125 52 168 1.85e-40 142
MsaG031235 MtrunA17_Chr7g0228231 58.879 107 44 0 12 118 14 120 2.57e-40 141
MsaG031235 MtrunA17_Chr1g0168661 61.165 103 40 0 13 115 22 124 2.84e-40 142
MsaG031235 MtrunA17_Chr8g0354661 59.434 106 43 0 10 115 35 140 4.39e-40 148
MsaG031235 MtrunA17_Chr6g0450101 52.893 121 55 1 1 119 1 121 1.09e-39 139
MsaG031235 MtrunA17_Chr8g0343831 58.475 118 45 1 1 118 1 114 7.64e-39 139
MsaG031235 MtrunA17_Chr1g0194301 53.043 115 54 0 8 122 29 143 8.83e-39 139
MsaG031235 MtrunA17_Chr3g0099131 58.654 104 43 0 12 115 41 144 1.00e-38 144
MsaG031235 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.53e-38 141
MsaG031235 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 1.82e-37 135
MsaG031235 MtrunA17_Chr7g0240821 56.604 106 46 0 17 122 6 111 2.36e-37 134
MsaG031235 MtrunA17_Chr5g0434931 55.140 107 48 0 11 117 34 140 2.59e-37 135
MsaG031235 MtrunA17_Chr7g0220341 57.273 110 45 1 10 117 23 132 2.97e-37 135
MsaG031235 MtrunA17_Chr2g0323321 62.245 98 36 1 1 98 1 97 4.31e-37 129
MsaG031235 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 8.84e-37 128
MsaG031235 MtrunA17_Chr1g0154031 54.808 104 47 0 12 115 76 179 1.28e-36 137
MsaG031235 MtrunA17_Chr1g0180391 55.238 105 47 0 12 116 19 123 1.44e-36 132
MsaG031235 MtrunA17_Chr5g0395221 65.909 88 30 0 1 88 1 88 2.93e-36 126
MsaG031235 MtrunA17_Chr2g0293911 52.381 126 59 1 8 133 20 144 5.42e-36 133
MsaG031235 MtrunA17_Chr8g0342531 49.138 116 54 1 1 111 1 116 7.42e-36 128
MsaG031235 MtrunA17_Chr4g0068921 53.913 115 53 0 8 122 20 134 1.71e-35 128
MsaG031235 MtrunA17_Chr7g0228991 55.140 107 48 0 11 117 28 134 2.50e-35 130
MsaG031235 MtrunA17_Chr4g0042621 75.309 81 20 0 89 169 15 95 6.25e-35 130
MsaG031235 MtrunA17_Chr5g0434831 55.660 106 47 0 11 116 6 111 6.46e-35 126
MsaG031235 MtrunA17_Chr1g0192411 35.814 215 116 5 8 210 8 212 6.72e-35 132
MsaG031235 MtrunA17_Chr8g0360111 56.863 102 44 0 11 112 24 125 1.06e-34 128
MsaG031235 MtrunA17_Chr2g0327821 51.923 104 50 0 12 115 6 109 1.10e-33 124
MsaG031235 MtrunA17_Chr5g0434841 53.774 106 49 0 11 116 19 124 1.56e-33 126
MsaG031235 MtrunA17_Chr4g0030881 51.818 110 46 1 13 115 8 117 1.87e-33 124
MsaG031235 MtrunA17_Chr5g0440781 44.961 129 69 2 13 140 13 140 2.72e-33 122
MsaG031235 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 7.83e-33 119
MsaG031235 MtrunA17_Chr5g0441141 46.032 126 66 2 13 137 13 137 1.19e-32 123
MsaG031235 MtrunA17_Chr5g0440761 46.032 126 66 2 13 137 13 137 1.24e-32 122
MsaG031235 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 2.49e-32 118
MsaG031235 MtrunA17_Chr8g0334881 46.018 113 59 2 8 119 6 117 5.91e-31 119
MsaG031235 MtrunA17_Chr4g0013361 49.038 104 52 1 12 114 10 113 1.51e-30 117
MsaG031235 MtrunA17_Chr3g0099141 54.023 87 40 0 8 94 36 122 1.78e-30 113
MsaG031235 MtrunA17_Chr5g0441131 46.552 116 60 2 10 124 7 121 3.44e-30 114
MsaG031235 MtrunA17_Chr5g0401731 47.706 109 56 1 14 122 15 122 4.76e-30 117
MsaG031235 MtrunA17_Chr3g0093811 58.824 85 35 0 44 128 14 98 7.46e-29 112
MsaG031235 MtrunA17_Chr6g0454921 45.946 111 59 1 14 124 15 124 2.09e-28 110
MsaG031235 MtrunA17_Chr4g0053431 38.217 157 95 2 14 169 5 160 1.29e-27 109
MsaG031235 MtrunA17_Chr3g0133601 49.074 108 54 1 8 115 31 137 1.78e-27 107
MsaG031235 MtrunA17_Chr4g0008551 47.788 113 54 2 14 126 38 145 2.89e-27 110
MsaG031235 MtrunA17_Chr7g0238631 42.969 128 71 2 12 138 111 237 5.76e-26 108
MsaG031235 MtrunA17_Chr7g0229131 50.526 95 46 1 44 138 4 97 1.55e-24 98.6
MsaG031235 MtrunA17_Chr5g0429661 44.231 104 57 1 12 115 120 222 8.64e-24 100
MsaG031235 MtrunA17_Chr6g0480581 38.129 139 77 3 14 148 4 137 1.59e-23 97.8
MsaG031235 MtrunA17_Chr7g0229101 62.857 70 26 0 44 113 4 73 1.82e-23 96.7
MsaG031235 MtrunA17_Chr5g0425591 49.412 85 42 1 10 93 7 91 3.27e-23 92.4
MsaG031235 MtrunA17_Chr6g0453751 48.913 92 38 2 11 93 19 110 1.03e-22 92.4
MsaG031235 MtrunA17_Chr4g0058991 41.818 110 63 1 9 118 204 312 6.46e-22 96.7
MsaG031235 MtrunA17_Chr3g0117511 41.818 110 63 1 9 118 178 286 6.76e-22 96.3
MsaG031235 MtrunA17_Chr5g0434901 60.294 68 27 0 46 113 7 74 2.52e-21 88.2
MsaG031235 MtrunA17_Chr3g0139671 40.952 105 61 1 12 116 83 186 3.60e-21 95.1
MsaG031235 MtrunA17_Chr3g0139671 33.962 106 68 2 14 118 33 137 3.39e-12 67.8
MsaG031235 MtrunA17_Chr6g0460661 40.517 116 67 2 14 129 16 129 5.27e-21 88.6
MsaG031235 MtrunA17_Chr6g0460671 36.364 132 82 2 14 145 99 228 8.49e-21 92.0
MsaG031235 MtrunA17_Chr5g0437321 42.857 105 56 2 8 112 16 116 2.33e-20 89.7
MsaG031235 MtrunA17_Chr1g0157731 40.000 105 62 1 12 116 89 192 2.36e-20 92.8
MsaG031235 MtrunA17_Chr1g0157731 32.075 106 70 2 14 118 39 143 1.54e-11 65.9
MsaG031235 MtrunA17_Chr4g0042501 41.176 102 59 1 14 115 105 205 2.17e-19 89.0
MsaG031235 MtrunA17_Chr5g0417621 39.806 103 61 1 14 116 134 235 2.81e-19 88.6
MsaG031235 MtrunA17_Chr3g0125801 40.367 109 62 2 8 115 10 116 3.67e-19 86.7
MsaG031235 MtrunA17_Chr7g0228531 38.532 109 65 2 10 118 216 322 9.61e-19 87.0
MsaG031235 MtrunA17_Chr5g0395231 60.714 56 22 0 78 133 5 60 1.25e-18 84.3
MsaG031235 MtrunA17_Chr7g0254261 37.162 148 81 3 1 142 81 222 6.24e-18 84.0
MsaG031235 MtrunA17_Chr5g0397841 41.837 98 56 1 12 109 108 204 1.22e-17 84.0
MsaG031235 MtrunA17_Chr7g0247141 65.957 47 15 1 1 46 1 47 4.98e-17 74.7
MsaG031235 MtrunA17_Chr7g0228401 43.023 86 48 1 25 110 290 374 5.03e-16 79.3
MsaG031235 MtrunA17_Chr7g0228481 36.634 101 62 2 10 110 216 314 8.29e-16 78.2
MsaG031235 MtrunA17_Chr1g0177901 41.860 86 49 1 25 110 5 89 1.69e-15 74.7
MsaG031235 MtrunA17_Chr7g0238651 36.667 120 71 3 17 132 10 128 3.92e-15 75.9
MsaG031235 MtrunA17_Chr1g0193901 53.448 58 26 1 12 68 11 68 4.29e-15 70.9
MsaG031235 MtrunA17_Chr1g0193891 53.448 58 26 1 12 68 11 68 4.29e-15 70.9
MsaG031235 MtrunA17_Chr1g0193871 53.448 58 26 1 12 68 11 68 4.29e-15 70.9
MsaG031235 MtrunA17_Chr1g0193881 53.448 58 26 1 12 68 11 68 4.29e-15 70.9
MsaG031235 MtrunA17_Chr5g0416341 39.394 99 59 1 17 115 29 126 4.93e-15 75.9
MsaG031235 MtrunA17_Chr7g0233061 35.652 115 53 2 14 119 180 282 1.84e-14 73.9
MsaG031235 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 2.86e-13 70.5
MsaG031235 MtrunA17_Chr3g0145551 72.973 37 10 0 92 128 2 38 2.73e-12 62.0
MsaG031235 MtrunA17_Chr5g0434871 55.814 43 19 0 74 116 2 44 6.60e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031235 AT5G15310.1 55.291 378 96 8 1 357 1 326 5.07e-129 373
MsaG031235 AT5G15310.2 57.263 358 109 9 1 357 1 315 2.65e-124 360
MsaG031235 AT5G15310.4 87.719 171 19 1 1 171 1 169 4.88e-107 314
MsaG031235 AT3G61250.1 67.630 173 52 1 1 173 1 169 7.12e-83 254
MsaG031235 AT1G34670.1 78.519 135 29 0 1 135 1 135 2.55e-78 244
MsaG031235 AT3G02940.2 77.444 133 30 0 1 133 1 133 1.45e-77 241
MsaG031235 AT3G02940.1 77.444 133 30 0 1 133 1 133 3.44e-77 240
MsaG031235 AT3G02940.3 77.444 133 30 0 1 133 1 133 3.44e-77 240
MsaG031235 AT4G21440.1 70.199 151 45 0 1 151 1 151 2.44e-76 239
MsaG031235 AT4G05100.1 77.692 130 28 1 1 129 1 130 6.44e-75 234
MsaG031235 AT5G16770.4 75.940 133 32 0 1 133 1 133 2.25e-74 233
MsaG031235 AT5G16770.3 75.940 133 32 0 1 133 1 133 2.25e-74 233
MsaG031235 AT5G16770.1 75.940 133 32 0 1 133 1 133 5.77e-74 233
MsaG031235 AT5G16770.2 75.940 133 32 0 1 133 1 133 5.77e-74 233
MsaG031235 AT4G28110.1 64.417 163 58 0 1 163 1 163 9.71e-73 228
MsaG031235 AT5G10280.1 70.677 133 39 0 1 133 1 133 1.13e-70 224
MsaG031235 AT5G65230.1 71.642 134 38 0 1 134 1 134 1.39e-70 223
MsaG031235 AT5G60890.1 73.077 130 35 0 1 130 1 130 8.42e-69 218
MsaG031235 AT5G54230.1 72.263 137 38 0 1 137 1 137 9.01e-69 219
MsaG031235 AT4G17785.2 72.388 134 36 1 1 133 1 134 1.01e-68 219
MsaG031235 AT4G17785.1 72.388 134 36 1 1 133 1 134 1.23e-68 219
MsaG031235 AT5G61420.2 72.656 128 35 0 1 128 1 128 1.48e-67 217
MsaG031235 AT5G07690.1 73.438 128 34 0 1 128 1 128 2.37e-67 216
MsaG031235 AT5G16600.1 65.333 150 50 1 1 150 1 148 1.19e-66 213
MsaG031235 AT1G18570.1 74.219 128 32 1 1 127 1 128 1.26e-65 211
MsaG031235 AT4G34990.1 61.039 154 60 0 1 154 1 154 1.74e-65 209
MsaG031235 AT4G22680.1 70.769 130 38 0 1 130 1 130 2.19e-65 208
MsaG031235 AT5G07700.1 71.875 128 36 0 1 128 1 128 2.47e-65 210
MsaG031235 AT5G07700.2 71.875 128 36 0 1 128 1 128 2.47e-65 210
MsaG031235 AT1G74080.1 65.986 147 49 1 1 146 1 147 3.99e-65 210
MsaG031235 AT4G12350.1 65.068 146 51 0 1 146 1 146 4.67e-65 208
MsaG031235 AT1G66230.1 71.094 128 37 0 1 128 1 128 6.66e-65 207
MsaG031235 AT2G16720.1 56.774 155 67 0 1 155 1 155 4.93e-63 202
MsaG031235 AT3G23250.1 60.927 151 52 2 1 144 1 151 2.01e-62 201
MsaG031235 AT2G31180.1 74.576 118 30 0 1 118 1 118 2.39e-62 200
MsaG031235 AT3G47600.1 54.971 171 74 2 1 169 1 170 2.61e-62 202
MsaG031235 AT5G62470.2 55.621 169 69 3 1 169 1 163 2.78e-62 203
MsaG031235 AT1G22640.1 63.504 137 50 0 1 137 1 137 1.16e-61 198
MsaG031235 AT5G56110.1 58.553 152 63 0 1 152 1 152 1.36e-61 200
MsaG031235 AT5G26660.1 69.531 128 39 0 1 128 1 128 1.54e-61 201
MsaG031235 AT4G09460.1 64.234 137 49 0 1 137 1 137 5.38e-61 196
MsaG031235 AT4G38620.1 64.844 128 45 0 1 128 1 128 1.24e-60 196
MsaG031235 AT1G08810.1 51.562 192 81 3 1 181 1 191 1.62e-60 196
MsaG031235 AT5G62470.1 55.621 169 68 4 1 169 1 162 1.78e-60 198
MsaG031235 AT1G57560.1 65.625 128 44 0 1 128 1 128 6.54e-60 196
MsaG031235 AT1G35515.1 66.667 126 42 0 1 126 1 126 8.57e-60 192
MsaG031235 AT5G14340.1 59.441 143 58 0 1 143 13 155 9.97e-60 194
MsaG031235 AT1G57560.2 65.625 128 44 0 1 128 1 128 1.17e-59 194
MsaG031235 AT4G01680.3 58.170 153 64 0 1 153 1 153 1.32e-59 192
MsaG031235 AT1G18710.1 63.571 140 51 0 1 140 1 140 1.94e-59 193
MsaG031235 AT1G06180.1 74.138 116 30 0 1 116 1 116 2.78e-59 192
MsaG031235 AT4G01680.1 58.170 153 64 0 1 153 1 153 3.15e-59 194
MsaG031235 AT1G74650.1 68.908 119 37 0 1 119 1 119 3.35e-59 194
MsaG031235 AT1G74430.1 65.185 135 47 0 1 135 1 135 5.21e-59 192
MsaG031235 AT1G09540.1 61.224 147 56 1 1 147 1 146 5.61e-59 195
MsaG031235 AT3G28910.1 56.805 169 70 2 1 169 1 166 6.17e-59 193
MsaG031235 AT5G15310.3 43.390 295 94 8 84 357 5 247 1.24e-58 190
MsaG031235 AT3G13540.1 64.000 125 45 0 4 128 15 139 2.30e-58 189
MsaG031235 AT5G62320.1 62.406 133 43 1 2 127 3 135 6.22e-57 186
MsaG031235 AT3G28470.1 58.929 168 59 3 1 158 1 168 6.98e-56 185
MsaG031235 AT4G01680.2 53.939 165 64 1 1 153 1 165 9.99e-56 186
MsaG031235 AT5G49330.1 67.241 116 38 0 1 116 1 116 3.24e-55 184
MsaG031235 AT1G56160.1 67.241 116 38 0 2 117 4 119 4.33e-55 182
MsaG031235 AT1G79180.1 64.957 117 41 0 2 118 4 120 5.30e-55 182
MsaG031235 AT1G16490.1 65.517 116 40 0 2 117 4 119 1.33e-54 181
MsaG031235 AT3G12720.1 61.983 121 46 0 6 126 16 136 7.08e-54 180
MsaG031235 AT1G63910.1 55.797 138 61 0 1 138 1 138 9.23e-53 179
MsaG031235 AT2G47460.1 55.714 140 62 0 1 140 1 140 1.42e-52 178
MsaG031235 AT3G62610.1 65.517 116 40 0 1 116 1 116 1.79e-52 177
MsaG031235 AT3G13890.2 62.931 116 43 0 1 116 1 116 8.85e-52 176
MsaG031235 AT5G23000.1 64.103 117 41 1 1 116 1 117 1.94e-51 174
MsaG031235 AT2G36890.1 61.417 127 48 1 1 126 1 127 6.12e-51 172
MsaG031235 AT2G36890.2 61.417 127 48 1 1 126 42 168 1.21e-50 172
MsaG031235 AT3G49690.1 65.812 117 39 1 1 116 1 117 2.34e-50 171
MsaG031235 AT5G57620.1 64.103 117 41 1 1 116 1 117 1.27e-49 169
MsaG031235 AT3G12820.1 62.931 116 43 0 3 118 5 120 1.28e-49 167
MsaG031235 AT5G65790.1 64.957 117 40 1 1 116 1 117 3.02e-49 169
MsaG031235 AT3G13890.1 58.400 125 43 1 1 116 1 125 1.12e-48 168
MsaG031235 AT1G79180.2 50.667 150 41 1 2 118 4 153 3.07e-48 166
MsaG031235 AT4G37780.1 59.829 117 46 1 1 116 1 117 5.05e-48 164
MsaG031235 AT5G12870.1 64.815 108 38 0 12 119 18 125 3.17e-46 159
MsaG031235 AT5G40330.1 43.931 173 83 2 13 179 13 177 1.31e-44 153
MsaG031235 AT3G08500.1 63.303 109 40 0 8 116 26 134 4.14e-44 155
MsaG031235 AT5G14750.1 62.500 104 39 0 13 116 17 120 1.93e-43 149
MsaG031235 AT1G48000.1 58.407 113 47 0 10 122 30 142 7.54e-42 146
MsaG031235 AT5G35550.1 64.486 107 38 0 12 118 14 120 1.31e-41 146
MsaG031235 AT5G40350.1 58.716 109 45 0 12 120 17 125 1.34e-41 145
MsaG031235 AT5G52600.1 50.000 148 65 1 9 147 9 156 1.60e-41 144
MsaG031235 AT2G26960.1 57.522 113 47 1 9 121 17 128 5.80e-41 149
MsaG031235 AT4G25560.1 60.377 106 42 0 13 118 11 116 7.96e-41 145
MsaG031235 AT5G52260.1 63.208 106 39 0 13 118 13 118 8.20e-41 144
MsaG031235 AT3G27920.1 60.000 105 42 0 13 117 15 119 9.21e-41 143
MsaG031235 AT5G55020.1 60.714 112 43 1 10 121 24 134 1.34e-40 150
MsaG031235 AT4G26930.1 57.143 112 47 1 10 121 17 127 2.65e-40 146
MsaG031235 AT2G32460.1 60.000 105 42 0 11 115 17 121 2.83e-40 148
MsaG031235 AT2G32460.2 60.000 105 42 0 11 115 5 109 2.87e-40 148
MsaG031235 AT5G06100.1 58.333 108 45 0 8 115 28 135 3.03e-40 147
MsaG031235 AT3G24310.1 60.952 105 41 0 11 115 17 121 3.42e-40 143
MsaG031235 AT3G11440.2 58.654 104 43 0 12 115 41 144 5.87e-40 147
MsaG031235 AT5G06100.5 58.333 108 45 0 8 115 28 135 9.09e-40 147
MsaG031235 AT5G06100.2 58.333 108 45 0 8 115 28 135 9.09e-40 147
MsaG031235 AT5G06100.3 58.333 108 45 0 8 115 28 135 9.09e-40 147
MsaG031235 AT5G06100.4 58.333 108 45 0 8 115 28 135 9.09e-40 147
MsaG031235 AT3G48920.1 57.143 105 45 0 13 117 19 123 1.06e-39 141
MsaG031235 AT3G30210.1 60.577 104 41 0 11 114 26 129 1.30e-39 142
MsaG031235 AT4G13480.1 61.165 103 40 0 13 115 7 109 1.35e-39 141
MsaG031235 AT3G27810.1 55.455 110 49 0 12 121 20 129 1.40e-39 140
MsaG031235 AT3G01530.1 58.095 105 44 0 12 116 25 129 1.54e-39 139
MsaG031235 AT5G26660.2 73.256 86 23 0 43 128 12 97 1.57e-39 142
MsaG031235 AT3G11440.3 58.654 104 43 0 12 115 41 144 1.73e-39 147
MsaG031235 AT3G11440.4 58.654 104 43 0 12 115 41 144 1.73e-39 147
MsaG031235 AT3G11440.1 58.654 104 43 0 12 115 41 144 1.73e-39 147
MsaG031235 AT1G25340.1 53.913 115 53 0 13 127 19 133 2.51e-38 138
MsaG031235 AT1G66370.1 55.652 115 47 1 1 115 1 111 1.11e-37 135
MsaG031235 AT2G47190.1 52.252 111 53 0 12 122 20 130 1.41e-37 136
MsaG031235 AT3G06490.1 53.659 123 57 0 8 130 15 137 6.62e-37 135
MsaG031235 AT1G68320.1 54.054 111 51 0 12 122 19 129 1.74e-36 134
MsaG031235 AT3G53200.1 56.731 104 45 0 12 115 9 112 8.27e-36 130
MsaG031235 AT3G47600.2 51.181 127 59 2 45 169 39 164 2.64e-34 129
MsaG031235 AT3G46130.1 54.286 105 48 0 11 115 8 112 4.79e-34 126
MsaG031235 AT1G66380.1 60.000 105 42 0 11 115 7 111 5.33e-34 122
MsaG031235 AT5G59780.3 54.369 103 47 0 13 115 9 111 6.66e-34 125
MsaG031235 AT5G49620.1 52.174 115 55 0 8 122 22 136 6.87e-34 127
MsaG031235 AT1G56650.1 52.381 126 52 1 11 128 7 132 1.06e-33 125
MsaG031235 AT1G25340.2 51.304 115 51 1 13 127 19 128 1.15e-33 126
MsaG031235 AT1G25340.3 51.304 115 51 1 13 127 19 128 3.05e-33 125
MsaG031235 AT1G66390.1 58.095 105 44 0 11 115 7 111 5.28e-33 123
MsaG031235 AT3G60460.1 49.541 109 53 2 12 119 11 118 1.46e-31 121
MsaG031235 AT5G49620.2 44.526 137 62 1 8 130 22 158 2.24e-30 118
MsaG031235 AT5G14750.3 64.103 78 25 1 39 116 12 86 1.03e-29 112
MsaG031235 AT3G12820.2 70.423 71 21 0 48 118 2 72 2.42e-29 112
MsaG031235 AT5G35550.2 71.622 74 21 0 45 118 50 123 2.47e-29 114
MsaG031235 AT2G26950.1 44.828 116 62 2 9 124 13 126 1.23e-28 115
MsaG031235 AT5G40350.2 61.842 76 29 0 45 120 5 80 2.64e-28 108
MsaG031235 AT1G18960.1 46.721 122 58 4 14 133 10 126 6.15e-28 111
MsaG031235 AT1G22640.3 59.494 79 32 0 59 137 2 80 1.87e-27 107
MsaG031235 AT4G37260.1 47.664 107 55 1 14 120 13 118 5.34e-27 109
MsaG031235 AT3G53200.2 61.039 77 30 0 39 115 3 79 6.02e-27 106
MsaG031235 AT5G59780.2 63.014 73 27 0 43 115 18 90 8.05e-27 106
MsaG031235 AT3G27810.2 57.143 77 33 0 45 121 4 80 1.12e-26 104
MsaG031235 AT1G71030.1 54.444 90 40 1 38 127 7 95 1.15e-26 105
MsaG031235 AT3G46130.3 63.889 72 26 0 44 115 9 80 1.47e-26 105
MsaG031235 AT3G46130.4 63.014 73 27 0 43 115 18 90 1.72e-26 105
MsaG031235 AT2G23290.1 48.077 104 53 1 14 117 13 115 2.27e-26 107
MsaG031235 AT5G67300.1 46.078 102 54 1 14 115 6 106 6.75e-26 105
MsaG031235 AT3G50060.1 45.192 104 56 1 14 117 6 108 1.67e-25 104
MsaG031235 AT1G71030.2 57.143 77 33 0 51 127 5 81 4.19e-25 100
MsaG031235 AT2G39880.1 47.170 106 47 2 14 115 50 150 3.39e-24 102
MsaG031235 AT3G55730.1 46.226 106 56 1 14 119 56 160 7.31e-24 102
MsaG031235 AT5G02320.1 44.762 105 57 1 12 116 125 228 8.31e-24 102
MsaG031235 AT5G02320.2 44.762 105 57 1 12 116 125 228 8.31e-24 102
MsaG031235 AT3G23250.2 53.763 93 36 2 59 144 2 94 8.61e-24 98.6
MsaG031235 AT5G02320.3 44.762 105 57 1 12 116 65 168 1.04e-23 102
MsaG031235 AT3G09230.1 38.095 147 74 2 14 144 55 200 1.07e-23 101
MsaG031235 AT1G17950.1 31.088 193 115 4 14 206 5 179 4.55e-23 97.1
MsaG031235 AT4G18770.1 42.727 110 62 1 9 118 212 320 4.62e-23 99.8
MsaG031235 AT1G66380.3 66.197 71 24 0 45 115 8 78 5.35e-23 92.8
MsaG031235 AT5G58850.1 42.991 107 60 1 12 118 103 208 5.42e-23 99.8
MsaG031235 AT3G09370.1 45.192 104 56 1 12 115 128 230 6.48e-23 100
MsaG031235 AT3G09370.1 33.019 106 69 2 14 118 78 182 5.04e-11 64.3
MsaG031235 AT3G09370.2 45.192 104 56 1 12 115 133 235 6.62e-23 100
MsaG031235 AT3G09370.2 33.019 106 69 2 14 118 83 187 5.22e-11 64.3
MsaG031235 AT3G27785.1 43.925 107 59 1 9 115 184 289 8.24e-23 99.4
MsaG031235 AT3G09370.3 45.192 104 56 1 12 115 141 243 8.91e-23 99.8
MsaG031235 AT3G09370.3 33.019 106 69 2 14 118 91 195 5.72e-11 64.3
MsaG031235 AT5G40360.1 40.157 127 71 4 8 133 154 276 1.29e-22 97.8
MsaG031235 AT5G11050.1 41.905 105 60 1 14 118 105 208 1.33e-22 98.6
MsaG031235 AT1G66380.2 51.020 98 47 1 11 107 7 104 1.59e-22 91.7
MsaG031235 AT5G11510.3 41.905 105 60 1 12 116 79 182 4.15e-21 95.5
MsaG031235 AT5G11510.1 41.905 105 60 1 12 116 79 182 4.15e-21 95.5
MsaG031235 AT5G11510.4 41.905 105 60 1 12 116 79 182 4.15e-21 95.5
MsaG031235 AT5G11510.5 41.905 105 60 1 12 116 79 182 4.71e-21 95.1
MsaG031235 AT5G11510.2 41.905 105 60 1 12 116 79 182 4.83e-21 95.1
MsaG031235 AT1G69560.1 41.284 109 61 2 9 116 102 208 9.11e-21 92.0
MsaG031235 AT1G69560.2 41.284 109 61 2 9 116 118 224 1.13e-20 92.0
MsaG031235 AT1G73410.1 42.453 106 60 1 10 115 2 106 1.39e-20 90.1
MsaG031235 AT4G32730.1 40.000 105 62 1 12 116 85 188 1.49e-20 93.6
MsaG031235 AT4G32730.1 33.962 106 68 2 14 118 35 139 5.50e-12 67.4
MsaG031235 AT5G14750.4 65.517 58 20 0 59 116 2 59 1.58e-20 87.0
MsaG031235 AT5G14750.2 65.517 58 20 0 59 116 2 59 1.58e-20 87.0
MsaG031235 AT4G32730.5 40.000 105 62 1 12 116 85 188 1.71e-20 93.6
MsaG031235 AT4G32730.5 33.962 106 68 2 14 118 35 139 6.37e-12 67.4
MsaG031235 AT4G32730.4 40.000 105 62 1 12 116 85 188 1.71e-20 93.6
MsaG031235 AT4G32730.4 33.962 106 68 2 14 118 35 139 6.37e-12 67.4
MsaG031235 AT4G32730.3 40.000 105 62 1 12 116 85 188 1.71e-20 93.6
MsaG031235 AT4G32730.3 33.962 106 68 2 14 118 35 139 6.37e-12 67.4
MsaG031235 AT4G32730.2 40.000 105 62 1 12 116 85 188 1.71e-20 93.6
MsaG031235 AT4G32730.2 33.962 106 68 2 14 118 35 139 6.37e-12 67.4
MsaG031235 AT5G61420.1 79.167 48 10 0 81 128 2 49 3.77e-20 89.7
MsaG031235 AT1G73410.2 42.453 106 60 1 10 115 2 106 3.78e-20 87.8
MsaG031235 AT4G33450.1 37.168 113 65 2 3 115 13 119 6.06e-20 88.2
MsaG031235 AT1G26780.2 42.857 105 57 2 12 115 96 198 1.19e-19 89.4
MsaG031235 AT1G26780.1 42.857 105 57 2 12 115 96 198 1.67e-19 87.8
MsaG031235 AT2G25230.1 39.831 118 68 2 9 124 21 137 1.40e-18 84.3
MsaG031235 AT3G29020.1 36.190 105 66 1 14 118 65 168 4.57e-17 79.7
MsaG031235 AT3G29020.2 36.190 105 66 1 14 118 67 170 6.36e-17 80.9
MsaG031235 AT5G17800.1 39.216 102 61 1 14 115 93 193 6.46e-17 80.9
MsaG031235 AT2G02820.3 39.394 99 59 1 17 115 33 130 5.05e-16 78.6
MsaG031235 AT2G02820.1 39.394 99 59 1 17 115 33 130 5.50e-16 79.3
MsaG031235 AT2G02820.2 39.394 99 59 1 17 115 33 130 7.42e-16 79.0
MsaG031235 AT4G28110.2 71.429 42 12 0 88 129 4 45 1.83e-15 74.7
MsaG031235 AT5G39700.1 36.538 104 65 1 15 118 57 159 2.21e-15 74.3
MsaG031235 AT4G00540.2 38.739 111 64 2 12 119 101 210 2.42e-15 77.0
MsaG031235 AT4G00540.1 38.739 111 64 2 12 119 99 208 3.03e-15 77.0
MsaG031235 AT1G14350.2 39.394 99 59 1 17 115 28 125 5.49e-15 76.3
MsaG031235 AT1G14350.1 39.394 99 59 1 17 115 28 125 5.49e-15 76.3
MsaG031235 AT3G28910.2 46.739 92 46 2 78 169 2 90 9.28e-15 73.6
MsaG031235 AT1G74650.3 73.810 42 11 0 78 119 2 43 1.37e-14 73.2
MsaG031235 AT5G14340.2 53.571 56 26 0 88 143 10 65 7.57e-14 69.7
MsaG031235 AT5G40430.1 34.188 117 75 2 4 120 44 158 1.06e-13 70.9
MsaG031235 AT2G37630.1 31.159 138 87 3 17 147 7 143 1.80e-13 71.2
MsaG031235 AT1G22640.2 58.000 50 21 0 88 137 16 65 1.28e-12 66.2
MsaG031235 AT4G25560.2 60.417 48 19 0 71 118 3 50 2.90e-12 65.9
MsaG031235 AT5G59780.1 62.791 43 16 0 73 115 4 46 3.03e-12 64.7
MsaG031235 AT1G74430.2 61.364 44 17 0 85 128 16 59 4.48e-12 65.1
MsaG031235 AT3G46130.2 62.791 43 16 0 73 115 4 46 5.30e-12 64.7

Find 56 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTATGTGAACGAATTT+TGG 0.141100 6:+22596664 None:intergenic
ATTCAACTTCATGCTCTCTT+AGG 0.167406 6:-22597961 MsaT031235.1:CDS
ATTTCTCCACTATTCATAAT+TGG 0.239670 6:+22596557 None:intergenic
ACTAAGATTTGAAGCAGTTT+TGG 0.252752 6:+22596745 None:intergenic
ATAATGAGATAAAGAATTAT+TGG 0.265414 6:-22596868 MsaT031235.1:CDS
AACTTTCCTCTCTTAATATC+TGG 0.287644 6:+22598009 None:intergenic
ATTATGAATAGTGGAGAAAT+TGG 0.314925 6:-22596554 MsaT031235.1:CDS
TAAGATGGACTAATTATCTT+AGG 0.318250 6:-22598032 MsaT031235.1:CDS
ATCATAGTCACTTGAAAGCT+TGG 0.389781 6:-22596634 MsaT031235.1:CDS
TGATCTTCTTCTGGAGTCCA+TGG 0.398939 6:+22598417 None:intergenic
TTCATGCTCTCTTAGGGAAC+AGG 0.403403 6:-22597954 MsaT031235.1:intron
GACAAAGTTGGTTTAAAGAA+AGG 0.409452 6:-22598441 MsaT031235.1:CDS
TCTTAGTCACATGGCTCAAT+GGG 0.413275 6:-22596729 MsaT031235.1:CDS
AATGGTGGTGATGGTGGAAA+TGG 0.425976 6:-22596212 MsaT031235.1:CDS
TTGAAAGATAAAGTTGAAGT+AGG 0.429625 6:+22596593 None:intergenic
GTTGCACCAATTATGAATAG+TGG 0.433389 6:-22596563 MsaT031235.1:CDS
GTGTCTATGATTGAGTTTGT+AGG 0.434040 6:-22596464 MsaT031235.1:CDS
TTCAACTTCATGCTCTCTTA+GGG 0.440645 6:-22597960 MsaT031235.1:CDS
ATCTTAGTCACATGGCTCAA+TGG 0.445039 6:-22596730 MsaT031235.1:CDS
CGTGCTTTGCCAGCTAAAGC+TGG 0.450806 6:-22598351 MsaT031235.1:intron
GTCAGCTATAGCAACACATT+TGG 0.463806 6:-22596903 MsaT031235.1:CDS
TGTCTATGATTGAGTTTGTA+GGG 0.466901 6:-22596463 MsaT031235.1:CDS
AGTTCAATTGTGAAAGAAGA+AGG 0.467308 6:-22596431 MsaT031235.1:CDS
ATGAAGATAACAATAACTAC+TGG 0.468008 6:-22596172 MsaT031235.1:CDS
GGAACACACATCTTAAGAAA+AGG 0.470556 6:-22596847 MsaT031235.1:CDS
GGTGATGGTGGAAATGGAAG+TGG 0.475445 6:-22596206 MsaT031235.1:CDS
GCATCATTACCAGCTTTAGC+TGG 0.492304 6:+22598342 None:intergenic
ATGATCAAGATCAAGATCAA+TGG 0.499871 6:-22596403 MsaT031235.1:CDS
TCATGAGTTGACTATGTCAA+TGG 0.502069 6:-22596339 MsaT031235.1:CDS
AAGAACATGGTCATGGAAGT+TGG 0.505038 6:-22598374 MsaT031235.1:CDS
CAAAACATTGGTGAATCAGA+TGG 0.512301 6:+22596119 None:intergenic
AATAGTGGAGAAATTGGAGG+AGG 0.518144 6:-22596548 MsaT031235.1:CDS
GTAAGAGCTGCAGATTAAGA+TGG 0.536224 6:-22598047 MsaT031235.1:CDS
GACTTGAGTTTGTCAGAGAG+TGG 0.538409 6:-22596248 MsaT031235.1:CDS
GAGAGCATGAAGTTGAATGA+TGG 0.544901 6:+22597966 None:intergenic
TCACCATGTTGTGACAAAGT+TGG 0.546765 6:-22598453 MsaT031235.1:CDS
GATGATGTCATTGCTGAAGA+AGG 0.549060 6:-22596305 MsaT031235.1:CDS
ATTAATAATGATGAGAACAA+TGG 0.557396 6:-22596491 MsaT031235.1:CDS
TTGGTTTAAAGAAAGGTCCA+TGG 0.561619 6:-22598434 MsaT031235.1:CDS
TATATTGAAGAACATGGTCA+TGG 0.565958 6:-22598381 MsaT031235.1:CDS
AAACCAACTTTGTCACAACA+TGG 0.572673 6:+22598450 None:intergenic
ATGATGTCATTGCTGAAGAA+GGG 0.582083 6:-22596304 MsaT031235.1:CDS
GAATCTAACAATGGTGGTGA+TGG 0.584861 6:-22596221 MsaT031235.1:CDS
CAAGATCAAGATCAATGGAA+AGG 0.588024 6:-22596398 MsaT031235.1:CDS
ATGAATAGTGGAGAAATTGG+AGG 0.588583 6:-22596551 MsaT031235.1:CDS
TCTAACAATGGTGGTGATGG+TGG 0.594929 6:-22596218 MsaT031235.1:CDS
CTTAGGCCAGATATTAAGAG+AGG 0.595623 6:-22598015 MsaT031235.1:CDS
CACATCTTATATCAAAACAT+TGG 0.606562 6:+22596107 None:intergenic
AAATTAGGGCTTCAAAGATG+TGG 0.614060 6:-22598069 MsaT031235.1:intron
TTGAGTTTGTCAGAGAGTGG+AGG 0.626434 6:-22596245 MsaT031235.1:CDS
GGAGAAAATAATAACAACAA+TGG 0.630403 6:-22596527 MsaT031235.1:CDS
TCAATTGTGAAAGAAGAAGG+TGG 0.631897 6:-22596428 MsaT031235.1:CDS
TGCTTCAAATCTTAGTCACA+TGG 0.636039 6:-22596738 MsaT031235.1:CDS
TTAGCTTATATTGAAGAACA+TGG 0.677580 6:-22598387 MsaT031235.1:CDS
AGTGGAGGTGAATCTAACAA+TGG 0.688377 6:-22596230 MsaT031235.1:CDS
GGAGGTGAATCTAACAATGG+TGG 0.762552 6:-22596227 MsaT031235.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 22596118 22598484 22596118 ID=MsaG031235
Chr6 mRNA 22596118 22598484 22596118 ID=MsaT031235.1;Parent=MsaG031235
Chr6 exon 22596118 22596928 22596118 ID=MsaT031235.1.exon3;Parent=MsaT031235.1
Chr6 CDS 22596118 22596928 22596118 ID=cds.MsaT031235.1;Parent=MsaT031235.1
Chr6 exon 22597955 22598084 22597955 ID=MsaT031235.1.exon2;Parent=MsaT031235.1
Chr6 CDS 22597955 22598084 22597955 ID=cds.MsaT031235.1;Parent=MsaT031235.1
Chr6 exon 22598352 22598484 22598352 ID=MsaT031235.1.exon1;Parent=MsaT031235.1
Chr6 CDS 22598352 22598484 22598352 ID=cds.MsaT031235.1;Parent=MsaT031235.1
Gene Sequence

>MsaT031235.1

ATGGGACGTTCACCATGTTGTGACAAAGTTGGTTTAAAGAAAGGTCCATGGACTCCAGAAGAAGATCAAAAACTCTTAGCTTATATTGAAGAACATGGTCATGGAAGTTGGCGTGCTTTGCCAGCTAAAGCTGGGCTTCAAAGATGTGGTAAGAGCTGCAGATTAAGATGGACTAATTATCTTAGGCCAGATATTAAGAGAGGAAAGTTTAGTTTGCAAGAAGAACAAACCATCATTCAACTTCATGCTCTCTTAGGGAACAGGTGGTCAGCTATAGCAACACATTTGGCAAAGAGAACAGATAATGAGATAAAGAATTATTGGAACACACATCTTAAGAAAAGGTTAACAAAAATGGGAATTGATCCGGTTACACACAAACCTAAAAATGATGCACTTCTTTCATCAAGTGATAATGCTCATTCCAAAACTGCTTCAAATCTTAGTCACATGGCTCAATGGGAAAGTGCTAGACTTGAAGCTGAAGCTAGACTTGTTAGAGAGTCCAAAATTCGTTCACATAATTCACTTCTTCATCATAGTCACTTGAAAGCTTGGAATATTAATCTTGAGTCTCCTACTTCAACTTTATCTTTCAATGAAAATGTTGCACCAATTATGAATAGTGGAGAAATTGGAGGAGGAGAAAATAATAACAACAATGGTAATGAGAAAAATATTAATAATGATGAGAACAATGGTGTTGTGTCTATGATTGAGTTTGTAGGGACTAATTCAAGTTCAATTGTGAAAGAAGAAGGTGGTGATGATCAAGATCAAGATCAATGGAAAGGTTATGAAAGTTCATTGACTTTTACATCAAATCTTCATCATGAGTTGACTATGTCAATGGATCAAAGTGTTGATGATGTCATTGCTGAAGAAGGGTTTACTAATCTTTTGCTTAAGACAAATTCTGAAGACTTGAGTTTGTCAGAGAGTGGAGGTGAATCTAACAATGGTGGTGATGGTGGAAATGGAAGTGGAAGTGAATTCTATGAAGATAACAATAACTACTGGAATAATATTCTTAATTTAGTTAATTCTTCTCCATCTGATTCACCAATGTTTTGA
Protein sequence

>MsaT031235.1

MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLAKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSSDNAHSKTASNLSHMAQWESARLEAEARLVRESKIRSHNSLLHHSHLKAWNINLESPTSTLSFNENVAPIMNSGEIGGGENNNNNGNEKNINNDENNGVVSMIEFVGTNSSSIVKEEGGDDQDQDQWKGYESSLTFTSNLHHELTMSMDQSVDDVIAEEGFTNLLLKTNSEDLSLSESGGESNNGGDGGNGSGSEFYEDNNNYWNNILNLVNSSPSDSPMF*