AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG031251

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031251 MtrunA17_Chr6g0453321 94.929 493 25 0 2 494 3 495 0.0 951
MsaG031251 MtrunA17_Chr7g0217581 55.992 509 185 9 1 494 99 583 2.10e-176 508
MsaG031251 MtrunA17_Chr4g0042481 44.246 504 225 17 2 492 3 463 1.60e-117 353
MsaG031251 MtrunA17_Chr3g0092111 42.197 519 220 20 1 494 2 465 1.35e-97 302
MsaG031251 MtrunA17_Chr7g0254161 36.585 492 215 20 4 474 8 423 9.04e-67 221
MsaG031251 MtrunA17_Chr8g0355261 33.466 502 252 18 2 493 9 438 9.52e-65 216
MsaG031251 MtrunA17_Chr5g0417601 36.817 421 144 12 73 492 80 379 1.23e-64 214
MsaG031251 MtrunA17_Chr5g0417551 36.232 414 135 16 85 492 79 369 3.42e-57 194
MsaG031251 MtrunA17_Chr5g0417561 36.364 418 129 17 85 492 71 361 9.70e-57 192
MsaG031251 MtrunA17_Chr6g0460731 39.683 252 116 8 92 327 51 282 1.28e-44 160
MsaG031251 MtrunA17_Chr6g0460721 41.393 244 110 9 95 329 47 266 2.21e-42 153
MsaG031251 MtrunA17_Chr5g0417571 43.137 204 102 5 8 199 7 208 7.01e-41 149
MsaG031251 MtrunA17_Chr2g0283811 81.538 65 11 1 125 188 36 100 9.20e-34 125
MsaG031251 MtrunA17_Chr3g0127201 67.742 62 20 0 130 191 22 83 5.58e-26 107
MsaG031251 MtrunA17_Chr8g0374251 75.926 54 13 0 135 188 68 121 3.03e-25 106
MsaG031251 MtrunA17_Chr8g0374111 44.915 118 53 3 135 243 29 143 3.17e-25 103
MsaG031251 MtrunA17_Chr2g0328021 50.549 91 44 1 99 188 25 115 3.61e-25 105
MsaG031251 MtrunA17_Chr8g0346551 50.538 93 36 1 130 212 19 111 5.01e-25 104
MsaG031251 MtrunA17_Chr4g0010151 68.966 58 18 0 131 188 78 135 5.56e-25 106
MsaG031251 MtrunA17_Chr4g0031411 51.087 92 43 1 128 217 68 159 1.67e-24 104
MsaG031251 MtrunA17_Chr2g0326001 69.492 59 18 0 130 188 35 93 1.82e-24 103
MsaG031251 MtrunA17_Chr2g0308011 77.551 49 11 0 135 183 37 85 2.24e-24 100
MsaG031251 MtrunA17_Chr8g0341671 75.000 52 13 0 135 186 20 71 2.51e-24 100
MsaG031251 MtrunA17_Chr4g0061761 69.811 53 16 0 133 185 38 90 7.48e-24 102
MsaG031251 MtrunA17_Chr1g0188851 62.712 59 22 0 129 187 37 95 1.94e-23 100
MsaG031251 MtrunA17_Chr7g0223311 76.471 51 12 0 137 187 79 129 2.39e-23 101
MsaG031251 MtrunA17_Chr4g0047001 75.000 52 13 0 137 188 57 108 3.42e-23 101
MsaG031251 MtrunA17_Chr3g0126201 58.108 74 20 1 137 210 53 115 3.87e-23 100
MsaG031251 MtrunA17_Chr8g0367161 47.368 95 45 2 123 217 20 109 4.40e-23 100
MsaG031251 MtrunA17_Chr5g0411951 67.273 55 18 0 131 185 39 93 5.80e-23 99.8
MsaG031251 MtrunA17_Chr7g0237921 71.154 52 15 0 137 188 78 129 1.24e-22 99.0
MsaG031251 MtrunA17_Chr2g0282511 55.844 77 31 1 107 183 20 93 1.49e-22 98.2
MsaG031251 MtrunA17_Chr3g0117601 45.455 110 53 1 97 206 30 132 1.49e-22 98.6
MsaG031251 MtrunA17_Chr1g0177251 54.321 81 34 2 130 207 6 86 1.72e-22 97.4
MsaG031251 MtrunA17_Chr4g0030051 65.625 64 21 1 125 187 30 93 2.86e-22 97.1
MsaG031251 MtrunA17_Chr2g0282051 73.077 52 13 1 137 188 48 98 9.10e-22 95.1
MsaG031251 MtrunA17_Chr4g0047761 66.667 54 18 0 135 188 72 125 9.48e-22 95.9
MsaG031251 MtrunA17_Chr2g0282441 70.000 50 15 0 137 186 27 76 1.88e-21 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031251 AT5G39660.3 41.856 528 196 23 5 494 3 457 5.50e-104 318
MsaG031251 AT5G39660.1 41.856 528 196 23 5 494 3 457 5.50e-104 318
MsaG031251 AT5G39660.2 41.856 528 196 23 5 494 3 457 5.50e-104 318
MsaG031251 AT3G47500.1 39.364 503 235 18 1 492 3 446 6.59e-82 261
MsaG031251 AT5G62430.1 36.709 395 119 17 105 492 26 296 1.67e-53 182
MsaG031251 AT1G69570.1 34.409 372 138 14 128 493 125 396 6.96e-46 165
MsaG031251 AT1G26790.1 57.463 134 48 3 80 209 59 187 9.29e-38 142
MsaG031251 AT1G29160.1 86.667 60 8 0 129 188 56 115 3.98e-35 129
MsaG031251 AT2G34140.1 83.333 60 10 0 129 188 52 111 1.78e-33 125
MsaG031251 AT5G60850.1 61.429 70 27 0 123 192 39 108 4.63e-26 108
MsaG031251 AT1G51700.1 72.881 59 15 1 135 192 33 91 1.88e-25 103
MsaG031251 AT3G55370.1 60.870 69 27 0 131 199 72 140 3.30e-25 106
MsaG031251 AT3G55370.2 60.870 69 27 0 131 199 72 140 3.56e-25 107
MsaG031251 AT5G60200.1 55.172 87 37 2 131 215 51 137 4.90e-25 104
MsaG031251 AT3G55370.3 60.870 69 27 0 131 199 117 185 6.09e-25 106
MsaG031251 AT3G21270.1 77.358 53 12 0 135 187 29 81 1.22e-24 101
MsaG031251 AT1G07640.1 61.111 72 25 1 116 187 5 73 1.43e-24 103
MsaG031251 AT2G28810.2 65.574 61 21 0 126 186 68 128 1.56e-24 104
MsaG031251 AT3G45610.1 56.944 72 30 1 131 201 36 107 1.60e-24 102
MsaG031251 AT3G61850.2 63.492 63 23 0 130 192 57 119 2.25e-24 103
MsaG031251 AT3G61850.3 63.492 63 23 0 130 192 57 119 2.25e-24 103
MsaG031251 AT3G61850.1 63.492 63 23 0 130 192 69 131 2.39e-24 103
MsaG031251 AT2G28810.1 65.574 61 21 0 126 186 85 145 2.39e-24 104
MsaG031251 AT3G50410.1 73.585 53 14 0 135 187 30 82 2.87e-24 102
MsaG031251 AT1G07640.2 75.472 53 13 0 135 187 77 129 3.36e-24 103
MsaG031251 AT3G61850.5 63.492 63 23 0 130 192 57 119 3.38e-24 103
MsaG031251 AT3G61850.4 63.492 63 23 0 130 192 69 131 4.05e-24 103
MsaG031251 AT2G37590.1 67.241 58 19 0 131 188 85 142 4.17e-24 103
MsaG031251 AT5G65590.1 73.214 56 15 0 135 190 41 96 4.18e-24 103
MsaG031251 AT1G07640.3 75.472 53 13 0 135 187 85 137 4.19e-24 103
MsaG031251 AT4G38000.1 52.874 87 39 2 134 219 40 125 4.76e-24 101
MsaG031251 AT4G24060.1 68.421 57 18 0 132 188 50 106 7.01e-24 102
MsaG031251 AT1G64620.1 71.154 52 15 0 132 183 46 97 4.06e-23 100
MsaG031251 AT1G28310.1 72.222 54 15 0 135 188 27 80 4.40e-23 100
MsaG031251 AT5G02460.1 67.241 58 19 0 131 188 91 148 5.97e-23 101
MsaG031251 AT1G28310.2 72.222 54 15 0 135 188 51 104 7.03e-23 100
MsaG031251 AT2G28510.1 69.643 56 17 0 137 192 50 105 7.13e-23 99.0
MsaG031251 AT5G66940.1 67.925 53 17 0 135 187 32 84 1.99e-22 96.3
MsaG031251 AT4G00940.1 66.102 59 20 0 130 188 63 121 2.93e-22 97.4
MsaG031251 AT4G00940.3 66.102 59 20 0 130 188 63 121 2.93e-22 97.4
MsaG031251 AT4G00940.2 66.102 59 20 0 130 188 63 121 2.93e-22 97.4
MsaG031251 AT1G47655.1 73.469 49 13 0 135 183 29 77 3.41e-22 95.1
MsaG031251 AT2G46590.1 67.925 53 17 0 130 182 63 115 6.84e-22 97.4
MsaG031251 AT2G46590.2 67.925 53 17 0 130 182 75 127 7.35e-22 97.4
MsaG031251 AT3G52440.1 69.231 52 16 0 137 188 27 78 7.36e-22 95.1
MsaG031251 AT3G52440.2 69.231 52 16 0 137 188 46 97 9.85e-22 95.1
MsaG031251 AT1G21340.1 66.667 54 18 0 137 190 40 93 1.27e-21 94.7
MsaG031251 AT4G21050.1 57.353 68 29 0 121 188 10 77 4.43e-21 92.0
MsaG031251 AT5G62940.1 69.388 49 15 0 137 185 75 123 7.66e-20 91.7
MsaG031251 AT4G21040.1 49.412 85 36 2 137 221 27 104 8.87e-19 85.9
MsaG031251 AT4G21080.1 53.333 75 31 2 137 208 27 100 5.67e-18 84.0
MsaG031251 AT4G21030.1 44.000 75 39 2 137 208 23 97 7.02e-11 62.0

Find 131 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATCCTCCACCGGCTTAT+TGG 0.171714 6:-22850119 MsaT031251.1:CDS
CTATCCTCCACCGGCTTATT+GGG 0.204943 6:-22850118 MsaT031251.1:CDS
ATTGAAAACTTCAAAGATTA+TGG 0.206877 6:-22850841 MsaT031251.1:CDS
GGTGGGAAGCTTTGACAATT+TGG 0.253300 6:+22850255 None:intergenic
CTGTTTCGGGTACAGTTATT+TGG 0.254197 6:+22850583 None:intergenic
GTTATTGTAGTAGCAGAATT+TGG 0.264718 6:+22850734 None:intergenic
GCAAGAAATGCCAGAGATAC+TGG 0.298374 6:-22850683 MsaT031251.1:CDS
GAGTTAACGGCTGCACTATT+TGG 0.304692 6:+22850042 None:intergenic
AGAATTCTGAACAGCTGTTT+CGG 0.322405 6:+22850569 None:intergenic
GAATTCTGAACAGCTGTTTC+GGG 0.323421 6:+22850570 None:intergenic
GCTGGATTGGCCTGCATGGC+AGG 0.325373 6:+22849745 None:intergenic
TTACCTAAGGTTGGCGAGTT+AGG 0.325633 6:+22850015 None:intergenic
GGTGTCCATGCTATTACAAC+GGG 0.366283 6:+22850755 None:intergenic
TGCTGCTGGATTGGCCTGCA+TGG 0.384791 6:+22849741 None:intergenic
GCATTGAACCTTGCTGATAA+AGG 0.387819 6:-22850444 MsaT031251.1:CDS
GGAGCACCAGCTTCATCTTC+TGG 0.388137 6:-22852422 MsaT031251.1:CDS
CCTAGACATTGCTGCTGGAT+TGG 0.394113 6:+22849732 None:intergenic
AGCTCAATATTGACAACTCT+CGG 0.400154 6:-22849862 MsaT031251.1:CDS
ACATGAATCCGTAGACCTTC+CGG 0.402858 6:+22850387 None:intergenic
TGATGTGTCCGAAGATTTGA+TGG 0.404612 6:+22850329 None:intergenic
ATGGCACAGTCTTTACATTC+AGG 0.405324 6:-22850500 MsaT031251.1:CDS
CAACCTTAGGTAAGCATTCA+AGG 0.416860 6:-22850005 MsaT031251.1:CDS
GGCAAAAGCCAAGGGGCACC+AGG 0.424018 6:+22850216 None:intergenic
TTCCCTTGAATGCTTACCTA+AGG 0.425560 6:+22850002 None:intergenic
CCCCGGCAGTCCAGTATCTC+TGG 0.430402 6:+22850673 None:intergenic
TTCTCTCTCTTCTTCATCCA+TGG 0.431823 6:+22852358 None:intergenic
CGAGTTAGGACCGGAGTTAA+CGG 0.433388 6:+22850029 None:intergenic
TTCATTGCTCTTTGAAGCAA+AGG 0.436161 6:+22849789 None:intergenic
AGACACAAACTCAAGATTAG+TGG 0.448603 6:-22850904 MsaT031251.1:CDS
ATAAAGAAGAAAAGTCCCTT+TGG 0.450455 6:-22849930 MsaT031251.1:CDS
CTCAAACCAACCAACTCAAC+AGG 0.451117 6:-22849970 MsaT031251.1:CDS
TGGGAAGACAATTCCGGTAC+CGG 0.459321 6:-22852474 MsaT031251.1:CDS
TCCGGTAGAGTCACCGGATC+CGG 0.459421 6:+22852442 None:intergenic
GCCAGAGATACTGGACTGCC+GGG 0.460238 6:-22850674 MsaT031251.1:CDS
CCGGAGATCTCTGCCGGATC+CGG 0.461337 6:-22852455 MsaT031251.1:CDS
TGCCGTGGAATCCATCTCAA+TGG 0.462888 6:-22850197 MsaT031251.1:CDS
TAAAGAAGAAAAGTCCCTTT+GGG 0.467980 6:-22849929 MsaT031251.1:CDS
TCAGAACCTGTTGAGTTGGT+TGG 0.472992 6:+22849964 None:intergenic
CCATGGATTGTTCCACGCAC+CGG 0.474496 6:+22850083 None:intergenic
GGTCCTAACTCGCCAACCTT+AGG 0.475475 6:-22850018 MsaT031251.1:CDS
CGTACTACCCTGGTGCCCCT+TGG 0.476868 6:-22850224 MsaT031251.1:CDS
GCAAAACTCACCTGCCATGC+AGG 0.477299 6:-22849755 MsaT031251.1:CDS
TGCCAGAGATACTGGACTGC+CGG 0.478106 6:-22850675 MsaT031251.1:CDS
TGATCATTCCATCAAATCTT+CGG 0.483222 6:-22850337 MsaT031251.1:CDS
CTTGAATGCTTACCTAAGGT+TGG 0.484913 6:+22850006 None:intergenic
GAAGGATGATGGACTCCGTT+TGG 0.487346 6:+22850534 None:intergenic
TTCGTCAGAACCTGTTGAGT+TGG 0.490581 6:+22849960 None:intergenic
ATAAGGCAGACGCGATTCGT+GGG 0.491435 6:-22849828 MsaT031251.1:CDS
AATAAGGCAGACGCGATTCG+TGG 0.493101 6:-22849829 MsaT031251.1:CDS
AACTTGTTCAAGAGAACTGC+TGG 0.493603 6:+22850281 None:intergenic
TTCCTACGACCGGCACCTAC+AGG 0.494832 6:+22850633 None:intergenic
TACAGTTCAGTGAAGGATGA+TGG 0.503313 6:+22850523 None:intergenic
GCCGGATCCGGTGACTCTAC+CGG 0.509037 6:-22852443 MsaT031251.1:CDS
TCTAAACCATGGTTCTTCCA+TGG 0.512969 6:-22852375 MsaT031251.1:CDS
TCTCAATCCGACTCGCCAAA+CGG 0.513729 6:-22850549 MsaT031251.1:CDS
CCGGATCCGGCAGAGATCTC+CGG 0.514110 6:+22852455 None:intergenic
TCTGGTGATGCTGTTGATGA+TGG 0.515932 6:-22852404 MsaT031251.1:CDS
CATGGATTGTTCCACGCACC+GGG 0.516259 6:+22850084 None:intergenic
TTATAAGCTACATAATTATG+AGG 0.516746 6:+22849690 None:intergenic
ATGGACTCCGTTTGGCGAGT+CGG 0.520233 6:+22850542 None:intergenic
TCATTAGACCGGAAGGTCTA+CGG 0.522416 6:-22850395 MsaT031251.1:CDS
CCAATCCAGCAGCAATGTCT+AGG 0.524624 6:-22849732 MsaT031251.1:CDS
TCTCACCCAATCATCAGAAA+AGG 0.525594 6:-22850937 MsaT031251.1:CDS
CATCCTTCACTGAACTGTAA+TGG 0.526917 6:-22850519 MsaT031251.1:CDS
CCGGCAGAGATCTCCGGTAC+CGG 0.531399 6:+22852461 None:intergenic
ATTGACCTAGACATTGCTGC+TGG 0.532105 6:+22849727 None:intergenic
AGAAGATGAAGCTGGTGCTC+CGG 0.532773 6:+22852424 None:intergenic
GCTGCACTATTTGGTGAAGA+AGG 0.534001 6:+22850051 None:intergenic
ACTTGAGAGCTCCATTGAGA+TGG 0.535364 6:+22850186 None:intergenic
GTGGCATGGCAAATCCTTGT+GGG 0.536245 6:+22850142 None:intergenic
GCTCAATATTGACAACTCTC+GGG 0.536746 6:-22849861 MsaT031251.1:CDS
TGGTGCTCCGGTAGAGTCAC+CGG 0.536837 6:+22852436 None:intergenic
TGCGTGGAACAATCCATGGC+TGG 0.539604 6:-22850079 MsaT031251.1:CDS
CAAGGGGCACCAGGGTAGTA+CGG 0.543849 6:+22850225 None:intergenic
CCAGAGATACTGGACTGCCG+GGG 0.544774 6:-22850673 MsaT031251.1:CDS
CAGAGATACTGGACTGCCGG+GGG 0.549995 6:-22850672 MsaT031251.1:CDS
CTCCATTGAGATGGATTCCA+CGG 0.551011 6:+22850195 None:intergenic
TGAATCGACCAAATGTAAGA+AGG 0.555366 6:-22850973 MsaT031251.1:CDS
TATTAACTCCTTTATCAGCA+AGG 0.557069 6:+22850436 None:intergenic
TATCCTCCACCGGCTTATTG+GGG 0.557577 6:-22850117 MsaT031251.1:CDS
ATTCTTGTTCTTCCTACGAC+CGG 0.559859 6:+22850623 None:intergenic
CTTCATCCATGGAAGAACCA+TGG 0.559893 6:+22852369 None:intergenic
ATGCTAAAACCCCAATAAGC+CGG 0.561380 6:+22850108 None:intergenic
TGGTGTCCATGCTATTACAA+CGG 0.562401 6:+22850754 None:intergenic
ATCATGGAAGCAAAAGACCC+TGG 0.564274 6:-22852509 MsaT031251.1:CDS
GGATTCCACGGCAAAAGCCA+AGG 0.568149 6:+22850207 None:intergenic
TGCCTGTAGGTGCCGGTCGT+AGG 0.569339 6:-22850635 MsaT031251.1:CDS
CCGGTACCGGAGATCTCTGC+CGG 0.569630 6:-22852461 MsaT031251.1:CDS
TTTGCTCGTCCTCAGTGGAG+GGG 0.569766 6:+22850868 None:intergenic
CGGATTCATGTACCCTATGT+TGG 0.570976 6:-22850375 MsaT031251.1:CDS
TAAGGCAGACGCGATTCGTG+GGG 0.575254 6:-22849827 MsaT031251.1:CDS
GTGTCCCCGTTGTAATAGCA+TGG 0.578322 6:-22850760 MsaT031251.1:CDS
AAACCCCAATAAGCCGGTGG+AGG 0.580141 6:+22850114 None:intergenic
ACCTACAGGCACATTTCTCA+TGG 0.584122 6:+22850647 None:intergenic
GGGTAGTACGGAACTTGCGG+TGG 0.584630 6:+22850237 None:intergenic
AACGGAATCATTAGACCGGA+AGG 0.586342 6:-22850402 MsaT031251.1:CDS
TAAGGTTGGCGAGTTAGGAC+CGG 0.591433 6:+22850020 None:intergenic
GAGATACTGGACTGCCGGGG+GGG 0.591622 6:-22850670 MsaT031251.1:CDS
CCGCAAGTTCCGTACTACCC+TGG 0.592010 6:-22850234 MsaT031251.1:CDS
CCGGTGCGTGGAACAATCCA+TGG 0.594068 6:-22850083 MsaT031251.1:CDS
AGAAATGTGCCTGTAGGTGC+CGG 0.595484 6:-22850642 MsaT031251.1:CDS
ACGTTGAGGATTGATGACTT+AGG 0.598062 6:-22849898 MsaT031251.1:CDS
AGAGATACTGGACTGCCGGG+GGG 0.602529 6:-22850671 MsaT031251.1:CDS
GCATCACCAGAAGATGAAGC+TGG 0.603079 6:+22852416 None:intergenic
TCATGGAAGCAAAAGACCCT+GGG 0.603420 6:-22852508 MsaT031251.1:CDS
CCAGGGTAGTACGGAACTTG+CGG 0.603954 6:+22850234 None:intergenic
GATTCCACGGCAAAAGCCAA+GGG 0.605584 6:+22850208 None:intergenic
AATAGTGCAGCCGTTAACTC+CGG 0.609641 6:-22850039 MsaT031251.1:CDS
AACCTTAGGTAAGCATTCAA+GGG 0.609767 6:-22850004 MsaT031251.1:CDS
GAAGAAGGTTGTGCCAGCCA+TGG 0.610893 6:+22850066 None:intergenic
TTTGGGTTCCGAAAACGTTG+AGG 0.613827 6:-22849912 MsaT031251.1:CDS
ATGCTATTACAACGGGGACA+CGG 0.617301 6:+22850762 None:intergenic
AGAAGAGAGAGAAATTGATG+AGG 0.620945 6:-22852348 MsaT031251.1:intron
CATGCCACTCTATCCTCCAC+CGG 0.623143 6:-22850127 MsaT031251.1:CDS
TAAGCCGGTGGAGGATAGAG+TGG 0.624963 6:+22850123 None:intergenic
GCAAAAGCCAAGGGGCACCA+GGG 0.629020 6:+22850217 None:intergenic
TTCTTGAATTCAGGACACAA+TGG 0.631423 6:-22851000 MsaT031251.1:intron
AACTCAACAGGTTCTGACGA+AGG 0.632008 6:-22849958 MsaT031251.1:CDS
AGTGGCATGGCAAATCCTTG+TGG 0.633181 6:+22850141 None:intergenic
AGATTGCATTGATTCACACA+AGG 0.639343 6:+22850467 None:intergenic
GATGGTATCATTCTAAACCA+TGG 0.655530 6:-22852386 MsaT031251.1:CDS
CGGTGGAGGATAGAGTGGCA+TGG 0.658087 6:+22850128 None:intergenic
GTGCCATTACAGTTCAGTGA+AGG 0.658325 6:+22850516 None:intergenic
GATTGCATTGATTCACACAA+GGG 0.666221 6:+22850468 None:intergenic
ATCAATTAACCCCTCCACTG+AGG 0.675714 6:-22850877 MsaT031251.1:CDS
GGTAGTACGGAACTTGCGGT+GGG 0.677836 6:+22850238 None:intergenic
CTAAAACCCCAATAAGCCGG+TGG 0.682119 6:+22850111 None:intergenic
AAGGCAGACGCGATTCGTGG+GGG 0.686554 6:-22849826 MsaT031251.1:CDS
GCCATGAGAAATGTGCCTGT+AGG 0.710810 6:-22850648 MsaT031251.1:CDS
ATTCCACGGCAAAAGCCAAG+GGG 0.744240 6:+22850209 None:intergenic
GTGTCCATGCTATTACAACG+GGG 0.773351 6:+22850756 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 22849705 22852528 22849705 ID=MsaG031251
Chr6 mRNA 22849705 22852528 22849705 ID=MsaT031251.1;Parent=MsaG031251
Chr6 exon 22849705 22851009 22849705 ID=MsaT031251.1.exon2;Parent=MsaT031251.1
Chr6 CDS 22849705 22851009 22849705 ID=cds.MsaT031251.1;Parent=MsaT031251.1
Chr6 exon 22852349 22852528 22852349 ID=MsaT031251.1.exon1;Parent=MsaT031251.1
Chr6 CDS 22852349 22852528 22852349 ID=cds.MsaT031251.1;Parent=MsaT031251.1
Gene Sequence

>MsaT031251.1

ATGGAAGCAAAAGACCCTGGGATCAAGCTTTTTGGGAAGACAATTCCGGTACCGGAGATCTCTGCCGGATCCGGTGACTCTACCGGAGCACCAGCTTCATCTTCTGGTGATGCTGTTGATGATGGTATCATTCTAAACCATGGTTCTTCCATGGATGAAGAAGAGAGAGAAATTGATGAGGACACAATGGAAGATGAATCGACCAAATGTAAGAAGGAAAAAGATGAAGCTCTCACCCAATCATCAGAAAAGGTCACTGATCTAGACACAAACTCAAGATTAGTGGAAGAATCAATTAACCCCTCCACTGAGGACGAGCAAAATACATTGAAAACTTCAAAGATTATGGAAGAACATACTGAGAATTCTCATGATAAGACCCTGAAAAAGCCAGACAAAATACTGCCGTGTCCCCGTTGTAATAGCATGGACACCAAATTCTGCTACTACAATAACTACAATGTTAACCAGCCTCGCCATTTTTGCAAGAAATGCCAGAGATACTGGACTGCCGGGGGGGCCATGAGAAATGTGCCTGTAGGTGCCGGTCGTAGGAAGAACAAGAATTCTGCTTCTCACTTTCGCCAAATAACTGTACCCGAAACAGCTGTTCAGAATTCTCAATCCGACTCGCCAAACGGAGTCCATCATCCTTCACTGAACTGTAATGGCACAGTCTTTACATTCAGGACTGATACACCCTTGTGTGAATCAATGCAATCTGCATTGAACCTTGCTGATAAAGGAGTTAATATTTCCGCGAAAAACGGAATCATTAGACCGGAAGGTCTACGGATTCATGTACCCTATGTTGGTGAAGAAAAGAGTGATGATCATTCCATCAAATCTTCGGACACATCAACAGCTCTGACAGAAGATGCAGCTGCCAGCAGTTCTCTTGAACAAGTTATGCCAAATTGTCAAAGCTTCCCACCGCAAGTTCCGTACTACCCTGGTGCCCCTTGGCTTTTGCCGTGGAATCCATCTCAATGGAGCTCTCAAGTACAACCACCACCTGCTTTTTTCCCACAAGGATTTGCCATGCCACTCTATCCTCCACCGGCTTATTGGGGTTTTAGCATGCCCGGTGCGTGGAACAATCCATGGCTGGCACAACCTTCTTCACCAAATAGTGCAGCCGTTAACTCCGGTCCTAACTCGCCAACCTTAGGTAAGCATTCAAGGGAAGAAAGCATGCTCAAACCAACCAACTCAACAGGTTCTGACGAAGGAAACAATAAAGAAGAAAAGTCCCTTTGGGTTCCGAAAACGTTGAGGATTGATGACTTAGGAGAAGCAGAAAAAAGCTCAATATTGACAACTCTCGGGATTAAAAATAATAAGGCAGACGCGATTCGTGGGGGAGGACTTTTCAAAGCCTTTGCTTCAAAGAGCAATGAAAAAGATAGCGTGCAAAACTCACCTGCCATGCAGGCCAATCCAGCAGCAATGTCTAGGTCAATTAGCTTTCATGAGACCTCATAA
Protein sequence

>MsaT031251.1

MEAKDPGIKLFGKTIPVPEISAGSGDSTGAPASSSGDAVDDGIILNHGSSMDEEEREIDEDTMEDESTKCKKEKDEALTQSSEKVTDLDTNSRLVEESINPSTEDEQNTLKTSKIMEEHTENSHDKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKKCQRYWTAGGAMRNVPVGAGRRKNKNSASHFRQITVPETAVQNSQSDSPNGVHHPSLNCNGTVFTFRTDTPLCESMQSALNLADKGVNISAKNGIIRPEGLRIHVPYVGEEKSDDHSIKSSDTSTALTEDAAASSSLEQVMPNCQSFPPQVPYYPGAPWLLPWNPSQWSSQVQPPPAFFPQGFAMPLYPPPAYWGFSMPGAWNNPWLAQPSSPNSAAVNSGPNSPTLGKHSREESMLKPTNSTGSDEGNNKEEKSLWVPKTLRIDDLGEAEKSSILTTLGIKNNKADAIRGGGLFKAFASKSNEKDSVQNSPAMQANPAAMSRSISFHETS*