AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG031278


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031278 MtrunA17_Chr6g0460671 95.677 347 15 0 1 347 1 347 0.0 619
MsaG031278 MtrunA17_Chr7g0254261 51.282 312 129 5 57 345 41 352 6.25e-77 240
MsaG031278 MtrunA17_Chr6g0460661 57.500 200 48 6 64 263 1 163 1.31e-66 207
MsaG031278 MtrunA17_Chr4g0042501 68.333 120 38 0 92 211 98 217 1.73e-56 189
MsaG031278 MtrunA17_Chr5g0417621 58.442 154 60 2 61 214 99 248 3.40e-56 189
MsaG031278 MtrunA17_Chr6g0480581 70.192 104 31 0 99 202 4 107 7.62e-51 169
MsaG031278 MtrunA17_Chr3g0125801 70.909 110 32 0 93 202 10 119 9.26e-51 171
MsaG031278 MtrunA17_Chr4g0008551 54.902 102 46 0 98 199 37 138 6.16e-38 139
MsaG031278 MtrunA17_Chr4g0053431 48.062 129 60 1 98 219 4 132 4.47e-37 134
MsaG031278 MtrunA17_Chr5g0401731 50.467 107 53 0 98 204 14 120 5.06e-36 133
MsaG031278 MtrunA17_Chr6g0454921 50.980 102 50 0 98 199 14 115 4.03e-34 124
MsaG031278 MtrunA17_Chr5g0437321 52.083 96 46 0 98 193 18 113 3.42e-32 122
MsaG031278 MtrunA17_Chr3g0133601 49.020 102 52 0 98 199 36 137 1.05e-31 119
MsaG031278 MtrunA17_Chr3g0139671 45.763 118 63 1 89 206 76 192 1.71e-30 122
MsaG031278 MtrunA17_Chr1g0157731 44.915 118 64 1 89 206 82 198 2.95e-29 119
MsaG031278 MtrunA17_Chr7g0238631 46.847 111 58 1 89 199 104 213 5.58e-28 114
MsaG031278 MtrunA17_Chr5g0429661 36.548 197 108 4 72 258 101 290 8.16e-28 111
MsaG031278 MtrunA17_Chr2g0311221 49.485 97 48 1 99 194 16 112 1.71e-24 102
MsaG031278 MtrunA17_Chr4g0058991 43.137 102 58 0 98 199 208 309 2.73e-24 103
MsaG031278 MtrunA17_Chr2g0328771 44.144 111 61 1 99 208 22 132 5.23e-24 100
MsaG031278 MtrunA17_Chr3g0117511 47.059 102 54 0 98 199 182 283 7.62e-24 101
MsaG031278 MtrunA17_Chr7g0228531 44.660 103 56 1 98 200 219 320 1.02e-23 101
MsaG031278 MtrunA17_Chr5g0397841 45.192 104 56 1 89 192 101 203 1.22e-23 101
MsaG031278 MtrunA17_Chr2g0323351 45.098 102 53 2 99 198 14 114 4.66e-23 96.3
MsaG031278 MtrunA17_Chr4g0032401 42.453 106 60 1 99 203 19 124 5.55e-23 97.8
MsaG031278 MtrunA17_Chr3g0115821 45.631 103 53 2 99 199 14 115 8.83e-23 97.4
MsaG031278 MtrunA17_Chr1g0203441 40.351 114 67 1 99 211 15 128 1.49e-22 95.5
MsaG031278 MtrunA17_Chr5g0417821 43.137 102 57 1 99 199 9 110 1.82e-22 95.5
MsaG031278 MtrunA17_Chr4g0022901 44.118 102 56 1 99 199 15 116 1.84e-22 95.1
MsaG031278 MtrunA17_Chr3g0099131 40.517 116 68 1 99 213 43 158 2.04e-22 98.2
MsaG031278 MtrunA17_Chr7g0270891 41.905 105 60 1 99 202 14 118 2.70e-22 96.3
MsaG031278 MtrunA17_Chr2g0323411 41.880 117 66 2 99 213 14 130 2.78e-22 95.9
MsaG031278 MtrunA17_Chr6g0470971 41.748 103 59 1 99 200 16 118 3.19e-22 94.7
MsaG031278 MtrunA17_Chr4g0022911 44.118 102 56 1 99 199 15 116 3.46e-22 94.7
MsaG031278 MtrunA17_Chr7g0274581 38.129 139 80 3 99 231 14 152 3.50e-22 92.8
MsaG031278 MtrunA17_Chr7g0217221 41.176 102 59 1 99 199 14 115 5.02e-22 94.0
MsaG031278 MtrunA17_Chr3g0088461 41.026 117 67 2 86 201 12 127 8.03e-22 94.7
MsaG031278 MtrunA17_Chr1g0193801 40.952 105 61 1 99 202 14 118 8.61e-22 95.1
MsaG031278 MtrunA17_Chr5g0410961 42.157 102 58 1 99 199 14 115 9.92e-22 94.4
MsaG031278 MtrunA17_Chr3g0103281 34.483 174 97 4 99 262 14 180 1.05e-21 94.0
MsaG031278 MtrunA17_Chr4g0022931 43.137 102 57 1 99 199 15 116 1.50e-21 92.8
MsaG031278 MtrunA17_Chr4g0030881 40.351 114 60 2 95 200 5 118 2.27e-21 92.0
MsaG031278 MtrunA17_Chr1g0187761 26.172 256 163 5 99 346 14 251 2.34e-21 92.0
MsaG031278 MtrunA17_Chr7g0228481 46.392 97 51 1 98 194 219 314 2.88e-21 94.4
MsaG031278 MtrunA17_Chr4g0058631 41.176 102 59 1 99 199 14 115 3.78e-21 93.2
MsaG031278 MtrunA17_Chr5g0397231 45.263 95 51 1 99 192 14 108 3.79e-21 92.8
MsaG031278 MtrunA17_Chr8g0387421 40.952 105 61 1 99 202 14 118 3.83e-21 92.4
MsaG031278 MtrunA17_Chr4g0055981 42.857 112 62 2 90 199 47 158 3.90e-21 90.5
MsaG031278 MtrunA17_Chr1g0193371 40.566 106 60 2 99 202 14 118 4.66e-21 92.8
MsaG031278 MtrunA17_Chr7g0228891 42.991 107 58 2 99 203 14 119 4.74e-21 91.3
MsaG031278 MtrunA17_Chr8g0360111 45.000 100 54 1 99 197 27 126 6.19e-21 90.9
MsaG031278 MtrunA17_Chr7g0254411 33.775 151 92 2 99 248 14 157 6.73e-21 92.0
MsaG031278 MtrunA17_Chr3g0092401 38.679 106 64 1 99 203 15 120 7.09e-21 91.7
MsaG031278 MtrunA17_Chr6g0453211 41.237 97 56 1 99 194 14 110 8.28e-21 91.7
MsaG031278 MtrunA17_Chr2g0281071 43.137 102 57 1 99 199 15 116 9.80e-21 91.7
MsaG031278 MtrunA17_Chr1g0203411 39.252 107 64 1 99 204 14 120 9.98e-21 90.9
MsaG031278 MtrunA17_Chr7g0220341 33.974 156 97 2 99 251 27 179 1.04e-20 90.5
MsaG031278 MtrunA17_Chr4g0060721 41.121 107 61 2 95 199 10 116 1.09e-20 91.3
MsaG031278 MtrunA17_Chr2g0309911 41.748 103 57 2 99 199 13 114 1.17e-20 90.9
MsaG031278 MtrunA17_Chr7g0271241 46.809 94 47 2 99 190 14 106 1.40e-20 91.7
MsaG031278 MtrunA17_Chr4g0048511 44.118 102 56 1 99 199 15 116 1.59e-20 91.3
MsaG031278 MtrunA17_Chr1g0209661 32.370 173 107 4 80 244 7 177 1.61e-20 90.5
MsaG031278 MtrunA17_Chr1g0211161 40.777 103 58 2 99 199 15 116 1.91e-20 88.6
MsaG031278 MtrunA17_Chr8g0354661 34.483 145 91 2 64 204 1 145 1.92e-20 92.4
MsaG031278 MtrunA17_Chr5g0434911 42.157 102 58 1 99 199 23 124 2.19e-20 89.7
MsaG031278 MtrunA17_Chr8g0342541 32.124 193 98 6 99 273 14 191 2.44e-20 90.5
MsaG031278 MtrunA17_Chr6g0453471 29.344 259 142 6 99 344 14 244 2.55e-20 90.5
MsaG031278 MtrunA17_Chr5g0400821 42.718 103 57 2 99 199 14 116 3.47e-20 89.7
MsaG031278 MtrunA17_Chr4g0042671 42.157 102 58 1 99 199 14 115 3.70e-20 90.9
MsaG031278 MtrunA17_Chr7g0261281 39.669 121 68 2 99 214 14 134 4.22e-20 89.0
MsaG031278 MtrunA17_Chr2g0327821 41.509 106 59 2 99 202 8 112 4.83e-20 87.8
MsaG031278 MtrunA17_Chr3g0117091 40.777 103 58 2 99 199 14 115 6.57e-20 89.4
MsaG031278 MtrunA17_Chr1g0151941 28.163 245 139 8 99 341 14 223 6.61e-20 87.8
MsaG031278 MtrunA17_Chr7g0228401 48.193 83 43 0 110 192 290 372 6.74e-20 90.5
MsaG031278 MtrunA17_Chr7g0228991 36.508 126 74 2 80 199 7 132 7.00e-20 88.2
MsaG031278 MtrunA17_Chr8g0385321 40.196 102 60 1 99 199 14 115 8.89e-20 88.6
MsaG031278 MtrunA17_Chr2g0330041 41.748 103 57 2 99 199 14 115 9.54e-20 89.4
MsaG031278 MtrunA17_Chr7g0275911 41.176 102 59 1 99 199 14 115 1.00e-19 87.4
MsaG031278 MtrunA17_Chr8g0342521 41.748 103 57 2 99 199 14 115 1.09e-19 89.0
MsaG031278 MtrunA17_Chr1g0192411 42.453 106 59 2 99 203 14 118 1.10e-19 89.4
MsaG031278 MtrunA17_Chr5g0435101 42.718 103 56 2 99 199 13 114 1.26e-19 85.9
MsaG031278 MtrunA17_Chr4g0070641 40.566 106 62 1 99 203 14 119 1.40e-19 84.7
MsaG031278 MtrunA17_Chr4g0070611 40.566 106 62 1 99 203 14 119 1.50e-19 87.8
MsaG031278 MtrunA17_Chr7g0238651 37.719 114 68 1 99 209 7 120 1.62e-19 88.6
MsaG031278 MtrunA17_Chr2g0322521 39.231 130 75 3 77 204 10 137 2.06e-19 88.6
MsaG031278 MtrunA17_Chr4g0037141 42.157 102 58 1 99 199 14 115 2.08e-19 87.0
MsaG031278 MtrunA17_Chr3g0080861 40.367 109 60 2 99 204 39 145 2.17e-19 89.0
MsaG031278 MtrunA17_Chr5g0434841 42.157 102 58 1 99 199 22 123 2.39e-19 87.4
MsaG031278 MtrunA17_Chr8g0346561 40.385 104 61 1 99 201 14 117 2.46e-19 87.0
MsaG031278 MtrunA17_Chr5g0395281 40.187 107 61 2 99 203 14 119 2.77e-19 87.0
MsaG031278 MtrunA17_Chr4g0039971 40.187 107 61 2 99 203 15 120 2.81e-19 87.8
MsaG031278 MtrunA17_Chr6g0452271 42.157 102 58 1 99 199 14 115 2.83e-19 87.4
MsaG031278 MtrunA17_Chr5g0434831 41.176 102 59 1 99 199 9 110 2.89e-19 84.3
MsaG031278 MtrunA17_Chr5g0434931 36.364 121 76 1 80 199 18 138 2.96e-19 86.7
MsaG031278 MtrunA17_Chr1g0177901 46.988 83 44 0 110 192 5 87 3.30e-19 84.7
MsaG031278 MtrunA17_Chr1g0180391 39.806 103 59 2 99 199 21 122 3.54e-19 85.1
MsaG031278 MtrunA17_Chr1g0167691 41.176 102 59 1 99 199 14 115 3.58e-19 85.9
MsaG031278 MtrunA17_Chr4g0022881 41.237 97 54 2 99 193 14 109 3.69e-19 85.1
MsaG031278 MtrunA17_Chr1g0194951 41.176 102 59 1 99 199 14 115 3.86e-19 87.4
MsaG031278 MtrunA17_Chr1g0194301 35.537 121 75 2 93 211 29 148 5.28e-19 85.9
MsaG031278 MtrunA17_Chr8g0342481 41.748 103 58 1 99 199 14 116 5.86e-19 87.4
MsaG031278 MtrunA17_Chr1g0154031 38.462 104 63 1 99 201 78 181 5.94e-19 87.4
MsaG031278 MtrunA17_Chr3g0135311 41.748 103 58 2 99 199 14 116 6.12e-19 86.7
MsaG031278 MtrunA17_Chr7g0217741 39.216 102 61 1 99 199 14 115 9.19e-19 85.5
MsaG031278 MtrunA17_Chr3g0131121 40.196 102 60 1 99 199 14 115 9.65e-19 85.5
MsaG031278 MtrunA17_Chr1g0167661 34.667 150 85 4 99 241 14 157 1.26e-18 84.3
MsaG031278 MtrunA17_Chr4g0022891 36.134 119 68 3 99 210 14 131 1.28e-18 84.0
MsaG031278 MtrunA17_Chr7g0240821 36.364 132 78 3 102 228 6 136 1.50e-18 83.6
MsaG031278 MtrunA17_Chr1g0186061 36.975 119 65 3 92 201 8 125 2.22e-18 83.6
MsaG031278 MtrunA17_Chr5g0440781 40.952 105 57 3 99 201 14 115 2.34e-18 82.0
MsaG031278 MtrunA17_Chr1g0152011 40.777 103 59 2 99 199 14 116 2.44e-18 84.7
MsaG031278 MtrunA17_Chr8g0343831 42.157 102 58 1 99 199 10 111 2.57e-18 83.2
MsaG031278 MtrunA17_Chr4g0013361 40.000 105 61 2 99 201 12 116 2.63e-18 84.0
MsaG031278 MtrunA17_Chr7g0233061 37.984 129 75 2 88 213 169 295 2.78e-18 84.7
MsaG031278 MtrunA17_Chr4g0044421 41.748 103 57 2 99 199 14 115 2.85e-18 81.6
MsaG031278 MtrunA17_Chr1g0194291 33.824 136 88 2 77 211 2 136 2.89e-18 83.6
MsaG031278 MtrunA17_Chr4g0068921 37.719 114 70 1 99 211 26 139 3.28e-18 81.6
MsaG031278 MtrunA17_Chr5g0440761 40.952 105 57 3 99 201 14 115 3.33e-18 83.2
MsaG031278 MtrunA17_Chr8g0334881 40.187 107 62 2 99 203 12 118 3.99e-18 84.0
MsaG031278 MtrunA17_Chr5g0441141 40.952 105 57 3 99 201 14 115 4.42e-18 83.2
MsaG031278 MtrunA17_Chr1g0168661 40.000 105 60 2 99 201 23 126 6.72e-18 82.4
MsaG031278 MtrunA17_Chr4g0054391 43.750 96 52 2 99 192 14 109 7.52e-18 82.8
MsaG031278 MtrunA17_Chr3g0121241 39.216 102 61 1 99 199 44 145 1.02e-17 82.4
MsaG031278 MtrunA17_Chr7g0228231 35.965 114 72 1 99 211 16 129 1.02e-17 80.5
MsaG031278 MtrunA17_Chr4g0028311 37.607 117 70 3 99 212 14 130 1.24e-17 82.4
MsaG031278 MtrunA17_Chr3g0110351 39.252 107 62 2 99 203 14 119 1.60e-17 82.0
MsaG031278 MtrunA17_Chr5g0441131 32.432 148 97 3 99 243 11 158 1.67e-17 79.3
MsaG031278 MtrunA17_Chr4g0072751 41.837 98 55 2 99 194 14 111 1.91e-17 82.4
MsaG031278 MtrunA17_Chr7g0264641 36.842 114 70 2 99 210 14 127 2.02e-17 81.3
MsaG031278 MtrunA17_Chr2g0293911 36.842 114 71 1 99 211 26 139 2.79e-17 81.6
MsaG031278 MtrunA17_Chr5g0434571 39.252 107 62 2 99 203 50 155 3.00e-17 81.6
MsaG031278 MtrunA17_Chr2g0327351 40.816 98 56 2 99 194 14 111 5.70e-17 80.5
MsaG031278 MtrunA17_Chr8g0349261 38.462 104 60 3 99 199 15 117 6.35e-17 80.1
MsaG031278 MtrunA17_Chr4g0057031 39.806 103 59 2 99 199 14 115 6.90e-17 79.7
MsaG031278 MtrunA17_Chr4g0068061 36.364 110 69 1 99 207 14 123 1.38e-16 79.7
MsaG031278 MtrunA17_Chr6g0450101 36.792 106 66 1 99 203 16 121 2.35e-16 77.0
MsaG031278 MtrunA17_Chr7g0247131 44.444 72 40 0 132 203 14 85 9.43e-16 76.3
MsaG031278 MtrunA17_Chr8g0362231 28.777 139 93 2 83 216 1 138 2.48e-15 76.6
MsaG031278 MtrunA17_Chr4g0042611 44.000 75 41 1 99 172 14 88 3.72e-15 70.1
MsaG031278 MtrunA17_Chr5g0434901 51.613 62 30 0 132 193 9 70 1.39e-14 69.3
MsaG031278 MtrunA17_Chr3g0099141 43.038 79 44 1 99 176 42 120 2.25e-14 69.7
MsaG031278 MtrunA17_Chr5g0416341 30.702 114 77 1 102 215 29 140 3.19e-14 73.6
MsaG031278 MtrunA17_Chr5g0395221 44.000 75 41 1 99 172 14 88 3.91e-14 67.4
MsaG031278 MtrunA17_Chr8g0342531 34.783 115 62 4 99 201 14 127 4.73e-14 69.3
MsaG031278 MtrunA17_Chr7g0229101 50.794 63 31 0 132 194 8 70 7.58e-14 69.7
MsaG031278 MtrunA17_Chr8g0342471 41.772 79 44 1 99 175 14 92 9.57e-14 67.8
MsaG031278 MtrunA17_Chr6g0483051 34.737 95 61 1 98 192 68 161 9.90e-14 72.4
MsaG031278 MtrunA17_Chr8g0342461 40.506 79 45 1 99 175 14 92 2.28e-13 66.6
MsaG031278 MtrunA17_Chr5g0425591 42.500 80 44 2 99 176 11 90 2.38e-13 65.5
MsaG031278 MtrunA17_Chr6g0487491 36.937 111 60 3 99 199 14 124 4.47e-13 68.6
MsaG031278 MtrunA17_Chr8g0342511 42.667 75 40 2 99 171 14 87 6.68e-13 64.3
MsaG031278 MtrunA17_Chr7g0229131 29.825 171 101 4 132 294 8 167 9.70e-13 65.9
MsaG031278 MtrunA17_Chr7g0269831 39.216 102 61 1 99 199 14 115 1.04e-12 68.6
MsaG031278 MtrunA17_Chr7g0274481 32.990 97 64 1 100 196 8 103 5.05e-12 67.4
MsaG031278 MtrunA17_Chr2g0323321 40.000 80 45 2 99 176 13 91 5.34e-12 62.0
MsaG031278 MtrunA17_Chr3g0104501 51.923 52 25 0 98 149 132 183 2.80e-11 62.4
MsaG031278 MtrunA17_Chr6g0453751 38.636 88 44 3 99 176 22 109 5.55e-11 59.7
MsaG031278 MtrunA17_Chr3g0093811 37.500 72 45 0 132 203 18 89 6.08e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031278 AT1G69560.1 51.892 185 76 3 99 273 107 288 7.18e-57 188
MsaG031278 AT1G69560.2 51.892 185 76 3 99 273 123 304 9.99e-57 188
MsaG031278 AT1G26780.2 39.338 272 128 6 99 345 98 357 4.52e-55 184
MsaG031278 AT1G17950.1 40.079 252 135 7 99 347 5 243 4.90e-55 181
MsaG031278 AT1G26780.1 65.873 126 42 1 99 224 98 222 1.93e-53 177
MsaG031278 AT4G33450.1 40.541 259 129 8 91 345 10 247 2.71e-52 174
MsaG031278 AT5G17800.1 38.629 321 128 12 52 345 43 321 1.40e-51 174
MsaG031278 AT3G29020.1 63.248 117 43 0 94 210 60 176 2.04e-48 163
MsaG031278 AT1G73410.1 72.115 104 29 0 99 202 6 109 3.06e-48 163
MsaG031278 AT1G73410.2 72.115 104 29 0 99 202 6 109 4.43e-48 161
MsaG031278 AT3G29020.2 63.248 117 43 0 94 210 62 178 1.24e-47 163
MsaG031278 AT3G55730.1 55.660 106 47 0 98 203 55 160 3.60e-36 135
MsaG031278 AT5G39700.1 60.606 99 39 0 100 198 57 155 3.84e-36 130
MsaG031278 AT2G39880.1 54.054 111 51 0 92 202 43 153 7.51e-35 131
MsaG031278 AT5G67300.1 52.941 102 48 0 98 199 5 106 1.90e-34 129
MsaG031278 AT4G37260.1 53.922 102 47 0 98 199 12 113 2.08e-34 129
MsaG031278 AT3G50060.1 49.020 102 52 0 98 199 5 106 7.30e-33 124
MsaG031278 AT3G09230.1 51.961 102 49 0 98 199 54 155 1.02e-32 125
MsaG031278 AT2G23290.1 50.980 102 50 0 98 199 12 113 6.35e-32 122
MsaG031278 AT3G09370.2 50.000 102 51 0 98 199 134 235 2.09e-29 118
MsaG031278 AT3G09370.1 50.000 102 51 0 98 199 129 230 2.31e-29 118
MsaG031278 AT3G09370.3 50.000 102 51 0 98 199 142 243 3.39e-29 118
MsaG031278 AT5G02320.3 35.079 191 114 3 98 278 66 256 4.39e-29 117
MsaG031278 AT5G02320.1 35.079 191 114 3 98 278 126 316 4.63e-29 117
MsaG031278 AT5G02320.2 35.079 191 114 3 98 278 126 316 4.63e-29 117
MsaG031278 AT5G11510.3 42.373 118 67 1 89 206 72 188 3.88e-28 115
MsaG031278 AT5G11510.1 42.373 118 67 1 89 206 72 188 3.88e-28 115
MsaG031278 AT5G11510.4 42.373 118 67 1 89 206 72 188 3.88e-28 115
MsaG031278 AT5G11510.2 42.373 118 67 1 89 206 72 188 7.31e-28 115
MsaG031278 AT5G11510.5 43.119 109 62 0 98 206 80 188 7.66e-28 115
MsaG031278 AT4G32730.5 43.243 111 62 1 89 199 78 187 9.73e-27 112
MsaG031278 AT4G32730.4 43.243 111 62 1 89 199 78 187 9.73e-27 112
MsaG031278 AT4G32730.3 43.243 111 62 1 89 199 78 187 9.73e-27 112
MsaG031278 AT4G32730.2 43.243 111 62 1 89 199 78 187 9.73e-27 112
MsaG031278 AT4G32730.1 43.243 111 62 1 89 199 78 187 9.87e-27 111
MsaG031278 AT5G11050.1 48.039 102 53 0 98 199 104 205 4.03e-26 108
MsaG031278 AT5G58850.1 42.500 120 69 0 80 199 86 205 8.03e-26 107
MsaG031278 AT3G48920.1 44.715 123 57 3 72 193 3 115 9.71e-25 101
MsaG031278 AT5G40360.1 43.590 117 61 2 99 215 158 269 1.06e-24 103
MsaG031278 AT2G25230.1 44.554 101 54 2 101 200 28 127 6.59e-24 98.6
MsaG031278 AT3G27785.1 36.806 144 85 2 98 238 188 328 1.05e-23 101
MsaG031278 AT1G18570.1 44.118 102 56 1 99 199 15 116 1.42e-23 100
MsaG031278 AT1G79180.1 46.078 102 54 1 99 199 16 117 1.55e-23 99.0
MsaG031278 AT4G25560.1 46.078 102 54 1 99 199 12 113 2.76e-23 98.2
MsaG031278 AT3G12720.1 40.476 126 71 3 76 199 2 125 3.02e-23 98.6
MsaG031278 AT3G53200.1 45.192 104 54 2 99 200 11 113 3.40e-23 97.1
MsaG031278 AT5G14750.1 37.415 147 80 4 99 237 18 160 3.95e-23 95.9
MsaG031278 AT4G26930.1 41.121 107 62 1 99 204 21 127 4.92e-23 99.4
MsaG031278 AT5G62470.1 40.000 105 63 0 99 203 14 118 6.32e-23 98.2
MsaG031278 AT4G28110.1 45.631 103 53 2 99 199 14 115 6.84e-23 97.1
MsaG031278 AT5G54230.1 45.098 102 55 1 99 199 14 115 7.68e-23 97.4
MsaG031278 AT3G11440.3 42.056 107 61 1 99 204 43 149 8.40e-23 99.8
MsaG031278 AT3G11440.4 42.056 107 61 1 99 204 43 149 8.40e-23 99.8
MsaG031278 AT3G11440.1 42.056 107 61 1 99 204 43 149 8.40e-23 99.8
MsaG031278 AT3G11440.2 42.056 107 61 1 99 204 43 149 1.03e-22 99.0
MsaG031278 AT4G01680.3 42.308 104 59 1 99 201 14 117 1.23e-22 95.5
MsaG031278 AT4G17785.2 44.860 107 56 2 99 203 15 120 1.24e-22 97.4
MsaG031278 AT4G17785.1 44.860 107 56 2 99 203 15 120 1.33e-22 97.4
MsaG031278 AT3G23250.1 37.931 145 76 2 99 242 14 145 1.71e-22 95.9
MsaG031278 AT5G40330.1 44.118 102 56 1 99 199 14 115 2.02e-22 94.4
MsaG031278 AT4G18770.1 43.137 102 58 0 98 199 216 317 2.09e-22 97.8
MsaG031278 AT4G01680.1 42.308 104 59 1 99 201 14 117 2.79e-22 96.3
MsaG031278 AT3G47600.1 32.121 165 106 2 99 257 14 178 3.82e-22 95.9
MsaG031278 AT1G63910.1 42.105 114 65 1 99 211 14 127 4.73e-22 96.3
MsaG031278 AT4G05100.1 44.118 102 56 1 99 199 15 116 5.02e-22 95.5
MsaG031278 AT3G27920.1 40.171 117 63 2 84 199 7 117 8.84e-22 92.8
MsaG031278 AT1G56160.1 43.689 103 55 2 99 199 16 117 1.17e-21 94.0
MsaG031278 AT5G52600.1 40.000 120 66 2 81 199 1 115 1.22e-21 91.7
MsaG031278 AT5G06100.5 41.121 107 62 1 99 204 34 140 1.74e-21 95.9
MsaG031278 AT5G06100.2 41.121 107 62 1 99 204 34 140 1.74e-21 95.9
MsaG031278 AT5G06100.3 41.121 107 62 1 99 204 34 140 1.74e-21 95.9
MsaG031278 AT5G06100.4 41.121 107 62 1 99 204 34 140 1.74e-21 95.9
MsaG031278 AT5G06100.1 41.346 104 60 1 99 201 34 137 1.77e-21 95.5
MsaG031278 AT5G52260.1 46.552 116 55 3 99 208 14 128 1.82e-21 92.8
MsaG031278 AT5G62470.2 39.623 106 63 1 99 203 14 119 2.16e-21 94.0
MsaG031278 AT5G10280.1 44.660 103 54 2 99 199 14 115 2.38e-21 93.6
MsaG031278 AT5G12870.1 39.623 106 63 1 99 203 20 125 2.38e-21 92.8
MsaG031278 AT1G74080.1 45.263 95 51 1 99 192 14 108 2.49e-21 93.6
MsaG031278 AT5G65230.1 45.631 103 53 2 99 199 14 115 2.81e-21 93.2
MsaG031278 AT1G57560.2 34.641 153 82 3 99 234 14 165 2.83e-21 92.4
MsaG031278 AT3G02940.2 44.118 102 56 1 99 199 14 115 2.95e-21 93.2
MsaG031278 AT2G26960.1 43.269 104 58 1 99 201 22 125 3.00e-21 94.4
MsaG031278 AT5G60890.1 40.000 105 62 1 99 202 14 118 3.15e-21 92.8
MsaG031278 AT4G01680.2 39.655 116 57 2 99 201 14 129 3.71e-21 93.2
MsaG031278 AT3G02940.1 44.118 102 56 1 99 199 14 115 4.72e-21 92.8
MsaG031278 AT3G02940.3 44.118 102 56 1 99 199 14 115 4.72e-21 92.8
MsaG031278 AT3G08500.1 41.346 104 60 1 99 201 32 135 5.12e-21 92.8
MsaG031278 AT2G32460.1 41.346 104 60 1 99 201 20 123 5.27e-21 94.4
MsaG031278 AT2G32460.2 41.346 104 60 1 99 201 8 111 5.89e-21 94.0
MsaG031278 AT2G26950.1 35.484 124 68 3 83 201 2 118 6.07e-21 93.2
MsaG031278 AT3G01140.2 41.176 102 59 1 99 199 14 115 6.70e-21 92.4
MsaG031278 AT5G16770.4 42.453 106 60 1 99 203 14 119 8.54e-21 92.0
MsaG031278 AT5G16770.3 42.453 106 60 1 99 203 14 119 8.54e-21 92.0
MsaG031278 AT3G30210.1 39.669 121 66 2 99 212 29 149 8.63e-21 91.3
MsaG031278 AT1G74430.1 41.176 102 59 1 99 199 14 115 9.31e-21 90.9
MsaG031278 AT4G38620.1 34.868 152 92 2 99 249 14 159 9.52e-21 91.3
MsaG031278 AT3G01140.1 41.176 102 59 1 99 199 57 158 9.52e-21 92.8
MsaG031278 AT5G57620.1 39.831 118 69 2 99 214 14 131 1.00e-20 92.0
MsaG031278 AT2G47190.1 40.000 110 65 1 99 207 22 131 1.11e-20 90.9
MsaG031278 AT1G34670.1 44.118 102 56 1 99 199 14 115 1.15e-20 92.0
MsaG031278 AT5G15310.1 41.748 103 57 2 99 199 14 115 1.17e-20 91.7
MsaG031278 AT5G15310.2 41.748 103 57 2 99 199 14 115 1.28e-20 91.3
MsaG031278 AT5G16770.1 42.453 106 60 1 99 203 14 119 1.51e-20 91.3
MsaG031278 AT5G16770.2 42.453 106 60 1 99 203 14 119 1.51e-20 91.3
MsaG031278 AT1G16490.1 44.118 102 56 1 99 199 16 117 1.58e-20 90.5
MsaG031278 AT5G07700.1 42.157 102 58 1 99 199 14 115 1.90e-20 91.3
MsaG031278 AT5G07700.2 42.157 102 58 1 99 199 14 115 1.90e-20 91.3
MsaG031278 AT4G21440.1 44.118 102 56 1 99 199 14 115 2.01e-20 91.3
MsaG031278 AT3G13890.1 39.640 111 57 2 99 199 14 124 2.20e-20 91.3
MsaG031278 AT5G61420.2 40.952 105 61 1 99 202 14 118 2.22e-20 91.3
MsaG031278 AT5G07690.1 42.574 101 57 1 99 198 14 114 2.27e-20 90.9
MsaG031278 AT1G74650.1 40.196 102 60 1 99 199 14 115 2.29e-20 90.9
MsaG031278 AT3G28910.1 41.176 102 59 1 99 199 14 115 2.52e-20 90.5
MsaG031278 AT5G15310.4 41.748 103 57 2 99 199 14 115 3.24e-20 89.0
MsaG031278 AT3G46130.1 40.769 130 66 4 81 208 1 121 3.35e-20 89.0
MsaG031278 AT5G14340.1 41.121 107 60 2 99 203 26 131 3.41e-20 89.4
MsaG031278 AT1G08810.1 41.176 102 59 1 99 199 14 115 3.52e-20 89.4
MsaG031278 AT5G59780.3 41.509 106 59 2 99 202 10 114 3.93e-20 88.2
MsaG031278 AT3G12820.1 41.748 103 57 2 99 199 16 117 4.28e-20 88.2
MsaG031278 AT3G13890.2 40.196 102 60 1 99 199 14 115 4.45e-20 90.5
MsaG031278 AT1G57560.1 41.748 103 57 2 99 199 14 115 5.99e-20 89.4
MsaG031278 AT5G26660.1 41.905 105 58 2 99 201 14 117 6.60e-20 89.7
MsaG031278 AT1G68320.1 39.623 106 63 1 99 203 21 126 9.49e-20 88.2
MsaG031278 AT2G31180.1 41.176 102 59 1 99 199 14 115 1.17e-19 87.4
MsaG031278 AT5G56110.1 43.137 102 57 1 99 199 14 115 1.22e-19 88.6
MsaG031278 AT1G25340.1 39.623 106 63 1 99 203 20 125 1.81e-19 87.4
MsaG031278 AT1G25340.2 40.000 105 59 1 99 203 20 120 1.85e-19 87.4
MsaG031278 AT1G09540.1 41.509 106 59 2 99 202 14 118 2.07e-19 88.6
MsaG031278 AT1G25340.3 40.000 105 59 1 99 203 20 120 2.31e-19 87.8
MsaG031278 AT1G18710.1 38.235 102 62 1 99 199 14 115 2.50e-19 86.7
MsaG031278 AT1G35515.1 40.196 102 60 1 99 199 14 115 2.57e-19 85.5
MsaG031278 AT4G00540.2 36.607 112 68 1 99 207 103 214 2.59e-19 88.6
MsaG031278 AT5G55020.1 39.252 107 64 1 99 204 28 134 2.65e-19 89.4
MsaG031278 AT5G65790.1 42.718 103 57 2 99 199 14 116 2.77e-19 88.2
MsaG031278 AT5G40430.1 36.036 111 70 1 99 209 54 163 3.59e-19 86.3
MsaG031278 AT1G79180.2 34.815 135 54 1 99 199 16 150 3.66e-19 87.4
MsaG031278 AT4G00540.1 36.607 112 68 1 99 207 101 212 4.16e-19 88.2
MsaG031278 AT3G49690.1 43.689 103 56 2 99 199 14 116 4.61e-19 86.7
MsaG031278 AT5G49620.1 34.043 141 92 1 72 211 1 141 5.61e-19 86.7
MsaG031278 AT1G22640.1 42.157 102 58 1 99 199 14 115 6.24e-19 85.5
MsaG031278 AT5G16600.1 32.370 173 102 4 99 269 14 173 7.66e-19 86.7
MsaG031278 AT5G14750.3 38.938 113 58 3 132 237 18 126 1.01e-18 82.8
MsaG031278 AT3G60460.1 40.187 107 62 2 99 203 13 119 1.08e-18 85.5
MsaG031278 AT5G35550.1 45.263 95 51 1 99 192 16 110 1.15e-18 84.7
MsaG031278 AT4G09460.1 39.216 102 61 1 99 199 14 115 1.57e-18 84.0
MsaG031278 AT2G16720.1 40.196 102 60 1 99 199 14 115 2.65e-18 84.0
MsaG031278 AT3G28470.1 44.211 95 52 1 99 192 14 108 2.76e-18 84.7
MsaG031278 AT1G48000.1 37.719 114 70 1 99 211 34 147 2.78e-18 83.6
MsaG031278 AT5G23000.1 40.777 103 59 2 99 199 14 116 3.48e-18 84.7
MsaG031278 AT3G53200.2 52.174 69 33 0 132 200 12 80 3.86e-18 82.0
MsaG031278 AT3G13540.1 38.889 108 64 2 94 199 19 126 4.02e-18 83.2
MsaG031278 AT4G34990.1 41.176 102 59 1 99 199 14 115 4.10e-18 83.6
MsaG031278 AT1G66230.1 39.252 107 62 2 99 203 14 119 8.04e-18 82.8
MsaG031278 AT5G49330.1 40.196 102 60 1 99 199 14 115 1.24e-17 83.2
MsaG031278 AT4G12350.1 34.752 141 88 3 99 237 14 152 1.52e-17 82.0
MsaG031278 AT3G18100.1 43.182 88 50 0 99 186 546 633 1.59e-17 84.3
MsaG031278 AT3G18100.1 32.292 96 63 2 98 192 494 588 4.64e-11 64.7
MsaG031278 AT3G18100.3 43.182 88 50 0 99 186 498 585 1.59e-17 84.3
MsaG031278 AT3G18100.3 32.292 96 63 2 98 192 446 540 3.94e-11 64.7
MsaG031278 AT5G40350.1 41.053 95 55 1 99 192 19 113 1.60e-17 80.5
MsaG031278 AT2G02820.3 38.000 100 62 0 102 201 33 132 2.01e-17 82.4
MsaG031278 AT1G66370.1 37.143 105 65 1 99 202 10 114 2.12e-17 80.9
MsaG031278 AT2G02820.1 36.585 123 69 1 102 215 33 155 2.13e-17 83.6
MsaG031278 AT3G61250.1 37.864 103 61 2 99 199 14 115 2.21e-17 82.0
MsaG031278 AT3G01530.1 40.594 101 59 1 99 198 27 127 2.27e-17 80.1
MsaG031278 AT1G06180.1 40.777 103 58 2 99 199 14 115 2.30e-17 80.9
MsaG031278 AT2G02820.2 36.585 123 69 1 102 215 33 155 2.41e-17 83.2
MsaG031278 AT3G18100.2 43.182 88 50 0 99 186 333 420 2.59e-17 83.6
MsaG031278 AT3G18100.2 32.292 96 63 2 98 192 281 375 7.01e-11 63.9
MsaG031278 AT3G18100.4 43.182 88 50 0 99 186 385 472 2.74e-17 83.6
MsaG031278 AT3G18100.4 32.292 96 63 2 98 192 333 427 8.09e-11 63.9
MsaG031278 AT3G24310.1 37.391 115 69 2 99 211 20 133 2.75e-17 81.3
MsaG031278 AT3G27810.1 37.168 113 68 2 99 208 22 134 4.20e-17 79.7
MsaG031278 AT3G12820.2 50.000 68 34 0 132 199 2 69 4.53e-17 79.0
MsaG031278 AT3G06490.1 35.965 114 72 1 99 211 21 134 4.88e-17 81.3
MsaG031278 AT4G13480.1 39.048 105 61 2 99 201 8 111 7.52e-17 79.7
MsaG031278 AT1G56650.1 33.758 157 97 3 92 244 3 156 1.09e-16 79.0
MsaG031278 AT2G37630.1 37.383 107 64 1 99 202 4 110 2.12e-16 79.7
MsaG031278 AT4G37780.1 38.532 109 62 3 99 205 14 119 2.38e-16 79.0
MsaG031278 AT5G26660.2 46.835 79 41 1 124 201 8 86 2.73e-16 79.0
MsaG031278 AT4G22680.1 40.777 103 58 2 99 199 14 115 2.87e-16 78.2
MsaG031278 AT2G47460.1 35.000 120 77 1 99 217 14 133 3.56e-16 79.3
MsaG031278 AT2G36890.2 40.777 103 59 2 99 199 55 157 5.69e-16 78.2
MsaG031278 AT2G36890.1 40.777 103 59 2 99 199 14 116 5.74e-16 77.8
MsaG031278 AT5G59780.2 46.479 71 38 0 132 202 23 93 6.69e-16 76.3
MsaG031278 AT1G66380.1 38.532 109 66 1 92 199 3 111 9.94e-16 73.6
MsaG031278 AT3G46130.4 44.156 77 43 0 132 208 23 99 1.14e-15 75.9
MsaG031278 AT3G46130.3 44.156 77 43 0 132 208 13 89 1.22e-15 75.5
MsaG031278 AT3G62610.1 37.255 102 63 1 99 199 14 115 1.28e-15 77.4
MsaG031278 AT5G62320.1 38.182 110 58 3 99 199 15 123 1.62e-15 75.5
MsaG031278 AT5G49620.2 30.968 155 92 2 72 211 1 155 1.65e-15 76.6
MsaG031278 AT1G14350.2 35.000 100 65 0 102 201 28 127 1.99e-15 77.4
MsaG031278 AT1G14350.1 35.000 100 65 0 102 201 28 127 1.99e-15 77.4
MsaG031278 AT3G47600.2 44.444 72 40 0 132 203 42 113 2.25e-15 76.3
MsaG031278 AT5G35550.2 55.738 61 27 0 132 192 53 113 6.15e-15 74.3
MsaG031278 AT1G66390.1 38.182 110 67 1 92 200 3 112 6.32e-15 73.9
MsaG031278 AT5G40350.2 49.180 61 31 0 132 192 8 68 6.73e-15 72.0
MsaG031278 AT3G27810.2 41.772 79 44 1 132 208 7 85 1.47e-14 71.6
MsaG031278 AT1G09770.1 31.655 139 87 4 100 234 8 142 1.09e-11 66.6
MsaG031278 AT5G14750.4 34.314 102 56 3 143 237 2 99 1.94e-11 61.6
MsaG031278 AT5G14750.2 34.314 102 56 3 143 237 2 99 1.94e-11 61.6
MsaG031278 AT1G66380.3 47.826 69 36 0 132 200 11 79 2.09e-11 60.5

Find 74 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACAATGAATCAATTT+TGG 0.098317 6:-23522944 MsaT031278.1:CDS
TTCATCTTCTACTCCTCTTT+TGG 0.139727 6:-23524683 MsaT031278.1:CDS
AAGGAAGAAAATGAGAAATT+TGG 0.160898 6:-23524514 MsaT031278.1:CDS
CTAGCTACATTATTCTTTCC+TGG 0.241589 6:+23523666 None:intergenic
AAGGGAAAAGTTGCAGATTA+AGG 0.276686 6:-23523920 MsaT031278.1:CDS
GTGTCATTTATTGACTTTCT+TGG 0.290615 6:-23522889 MsaT031278.1:CDS
TCTCATTGCACTGCAAATTC+TGG 0.302223 6:+23523068 None:intergenic
TTGCATGCTCATACACTTCA+TGG 0.308993 6:-23523831 MsaT031278.1:CDS
TGATGGTTATGGTTTCTCTT+TGG 0.310144 6:-23524743 MsaT031278.1:CDS
AAAGCTGCTCTATTGATTCT+AGG 0.313747 6:+23523879 None:intergenic
AACACCAAGCTTTCCATTAG+AGG 0.318928 6:-23524490 MsaT031278.1:CDS
CACATTTGCAAATTCTTTCC+TGG 0.321921 6:-23523795 MsaT031278.1:CDS
TAGCTTTCTCTTTCTTGAAA+TGG 0.335783 6:+23523701 None:intergenic
CATACTCATTTGTGAATCAT+AGG 0.343634 6:+23523554 None:intergenic
TGGTCTCCAATGACCTCTAA+TGG 0.346646 6:+23524477 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.351387 6:+23523777 None:intergenic
ATGAATTTGGTCCTCACAAT+TGG 0.357978 6:-23524423 MsaT031278.1:CDS
AGGAAGAAAATGAGAAATTT+GGG 0.359459 6:-23524513 MsaT031278.1:CDS
GGAAAGTTCAAAATACCCTT+TGG 0.375377 6:-23524637 MsaT031278.1:CDS
GAAAGTTCAAAATACCCTTT+GGG 0.383315 6:-23524636 MsaT031278.1:CDS
AGCTTTCCATTAGAGGTCAT+TGG 0.384561 6:-23524483 MsaT031278.1:CDS
TGAGTTTGAATATGAATGAT+TGG 0.387864 6:+23522999 None:intergenic
ATAGAAAGAAAGGTAGAAGT+AGG 0.391467 6:-23523105 MsaT031278.1:CDS
CATATTGGTAACAATGAGTC+TGG 0.398380 6:-23524658 MsaT031278.1:CDS
CCAATCTCAACCTCACTACT+AGG 0.403128 6:-23523596 MsaT031278.1:CDS
AAATGTGAGAGATAAGATTA+AGG 0.412885 6:-23522911 MsaT031278.1:CDS
TAGCTACATTATTCTTTCCT+GGG 0.420815 6:+23523667 None:intergenic
AACTTGAACAATGATGGTTA+TGG 0.426752 6:-23524754 MsaT031278.1:CDS
AGGCTTACTTATAGAAAGAA+AGG 0.428586 6:-23523115 MsaT031278.1:CDS
AAGGTAGAAGTAGGGGACTA+TGG 0.428911 6:-23523096 MsaT031278.1:CDS
GATGAAGAAGGAAGTGGAGA+TGG 0.450833 6:+23524700 None:intergenic
GTTGAGTTAGATTCATCAAA+CGG 0.452201 6:+23523624 None:intergenic
TCACTAAACTTGAACAATGA+TGG 0.458857 6:-23524760 MsaT031278.1:CDS
GTAGAAGATGAAGAAGGAAG+TGG 0.470505 6:+23524694 None:intergenic
AGAAGGAAGTGGAGATGGAA+GGG 0.471954 6:+23524705 None:intergenic
CCTAGTAGTGAGGTTGAGAT+TGG 0.475467 6:+23523596 None:intergenic
TAGAAAGAAAGGTAGAAGTA+GGG 0.480588 6:-23523104 MsaT031278.1:CDS
TGACCATGCTCTCATTAGGA+TGG 0.490702 6:+23524593 None:intergenic
ATACACTTCATGGTAACAAA+TGG 0.493137 6:-23523821 MsaT031278.1:CDS
GTTCAAGTTTAGTGAACTCA+TGG 0.494602 6:+23524768 None:intergenic
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6:-23522872 None:intergenic
GAACAAATACATGGAAGATC+GGG 0.507355 6:-23524388 MsaT031278.1:intron
TTTATTGACTTTCTTGGAGT+AGG 0.507502 6:-23522883 MsaT031278.1:CDS
AAGCTAACATTTCAAATCCC+AGG 0.510479 6:-23523684 MsaT031278.1:CDS
AAGAAGGAAGTGGAGATGGA+AGG 0.512851 6:+23524704 None:intergenic
TGAACAAATACATGGAAGAT+CGG 0.519885 6:-23524389 MsaT031278.1:CDS
TTGAATATGAATGATTGGAT+TGG 0.524412 6:+23523004 None:intergenic
ATGACCTCTAATGGAAAGCT+TGG 0.534815 6:+23524486 None:intergenic
TCATTTGTGAATCATAGGCT+TGG 0.536300 6:+23523559 None:intergenic
AGAAAGAAAGGTAGAAGTAG+GGG 0.536632 6:-23523103 MsaT031278.1:CDS
CTTGGAGTAGGTGATACATA+GGG 0.552083 6:-23522871 None:intergenic
TTAAGCTTAGCATCTTCAGA+TGG 0.553691 6:+23524457 None:intergenic
TTCATCAAACGGATTTGTGA+TGG 0.555045 6:+23523635 None:intergenic
AGAGGAGTAGAAGATGAAGA+AGG 0.558498 6:+23524688 None:intergenic
AGGTTGTTCTCAAGGTCACA+TGG 0.563554 6:-23523046 MsaT031278.1:CDS
TCATTAGGATGGATCACTGA+AGG 0.567180 6:+23524604 None:intergenic
TGATCATGGCTAGGAAGCAA+AGG 0.567964 6:-23523737 MsaT031278.1:CDS
AACATTGCTGAACAAATACA+TGG 0.572771 6:-23524397 MsaT031278.1:CDS
GCAATGAGAGGTTGTTCTCA+AGG 0.574721 6:-23523054 MsaT031278.1:CDS
TTTGCAAATTCTTTCCTGGA+AGG 0.574934 6:-23523791 MsaT031278.1:CDS
CTTGTCAATGAAAGTTGACA+AGG 0.581911 6:-23524533 MsaT031278.1:CDS
TTACCAATATGACCCAAAAG+AGG 0.582661 6:+23524670 None:intergenic
GATCATGGCTAGGAAGCAAA+GGG 0.587417 6:-23523736 MsaT031278.1:CDS
GCAATGTTGTTCCAATTGTG+AGG 0.589775 6:+23524412 None:intergenic
CATTAGGATGGATCACTGAA+GGG 0.599580 6:+23524605 None:intergenic
GAAGGGTTAGAAATCCCAAA+GGG 0.605125 6:+23524622 None:intergenic
GATCCATCCTAATGAGAGCA+TGG 0.615775 6:-23524596 MsaT031278.1:CDS
TAGGCTTGGTAATTAAGCAA+AGG 0.630274 6:+23523573 None:intergenic
CATGGGAAAGCTTAAGAGTG+TGG 0.638298 6:-23523028 MsaT031278.1:CDS
GGAAAAGTTGCAGATTAAGG+TGG 0.645857 6:-23523917 MsaT031278.1:CDS
TAAGCAAAGGCCTAGTAGTG+AGG 0.652290 6:+23523586 None:intergenic
AGAATTTGCAGTGCAATGAG+AGG 0.669530 6:-23523066 MsaT031278.1:CDS
TGAAGGGTTAGAAATCCCAA+AGG 0.675804 6:+23524621 None:intergenic
GGTTGTTCTCAAGGTCACAT+GGG 0.692971 6:-23523045 MsaT031278.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 23522873 23524788 23522873 ID=MsaG031278
Chr6 mRNA 23522873 23524788 23522873 ID=MsaT031278.1;Parent=MsaG031278
Chr6 exon 23522873 23523135 23522873 ID=MsaT031278.1.exon3;Parent=MsaT031278.1
Chr6 CDS 23522873 23523135 23522873 ID=cds.MsaT031278.1;Parent=MsaT031278.1
Chr6 exon 23523559 23523939 23523559 ID=MsaT031278.1.exon2;Parent=MsaT031278.1
Chr6 CDS 23523559 23523939 23523559 ID=cds.MsaT031278.1;Parent=MsaT031278.1
Chr6 exon 23524389 23524788 23524389 ID=MsaT031278.1.exon1;Parent=MsaT031278.1
Chr6 CDS 23524389 23524788 23524389 ID=cds.MsaT031278.1;Parent=MsaT031278.1
Gene Sequence

>MsaT031278.1

ATGAGTTCACTAAACTTGAACAATGATGGTTATGGTTTCTCTTTGGACTTGAATATTTCTTCCCTTCCATCTCCACTTCCTTCTTCATCTTCTACTCCTCTTTTGGGTCATATTGGTAACAATGAGTCTGGAAAGTTCAAAATACCCTTTGGGATTTCTAACCCTTCAGTGATCCATCCTAATGAGAGCATGGTCAAAAATAATAAAGGGAATTTTGGGGATGAGAGAAAGAACTTGTCAATGAAAGTTGACAAGGAAGAAAATGAGAAATTTGGGAACACCAAGCTTTCCATTAGAGGTCATTGGAGACCATCTGAAGATGCTAAGCTTAAAAAACTTGTTGATGAATTTGGTCCTCACAATTGGAACAACATTGCTGAACAAATACATGGAAGATCGGGGAAAAGTTGCAGATTAAGGTGGTGTAATCAGCTAGATCCTAGAATCAATAGAGCAGCTTTTAGTGAGGAAGAAGAGGAGAAGCTTTTGCATGCTCATACACTTCATGGTAACAAATGGTCACACATTTGCAAATTCTTTCCTGGAAGGACAGACAATGCACTGAAGAATCATTTTCATGTGATCATGGCTAGGAAGCAAAGGGAACTATTATCATCCATTTCAAGAAAGAGAAAGCTAACATTTCAAATCCCAGGAAAGAATAATGTAGCTAGCAAATCAGCCATCACAAATCCGTTTGATGAATCTAACTCAACTTGCACCAATCTCAACCTCACTACTAGGCCTTTGCTTAATTACCAAGCCTATGATTCACAAATGAGCTTACTTATAGAAAGAAAGGTAGAAGTAGGGGACTATGGTTTTGCCAGAATTTGCAGTGCAATGAGAGGTTGTTCTCAAGGTCACATGGGAAAGCTTAAGAGTGTGGACCAATCCAATCATTCATATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCAACAAACATGAACAATGAATCAATTTTGGGAGAAAGTGAAAATGTGAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGTGATACATAG

Protein sequence

>MsaT031278.1

MSSLNLNNDGYGFSLDLNISSLPSPLPSSSSTPLLGHIGNNESGKFKIPFGISNPSVIHPNESMVKNNKGNFGDERKNLSMKVDKEENEKFGNTKLSIRGHWRPSEDAKLKKLVDEFGPHNWNNIAEQIHGRSGKSCRLRWCNQLDPRINRAAFSEEEEEKLLHAHTLHGNKWSHICKFFPGRTDNALKNHFHVIMARKQRELLSSISRKRKLTFQIPGKNNVASKSAITNPFDESNSTCTNLNLTTRPLLNYQAYDSQMSLLIERKVEVGDYGFARICSAMRGCSQGHMGKLKSVDQSNHSYSNSEVSVSESVATNMNNESILGESENVRDKIKVSFIDFLGVGDT*